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Domain combinations for Periplasmic chaperone C-domain superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Periplasmic chaperone C-domain domain in that genome.

Complete genomes
Genome     Number   Proteins
Thelohanellus_kitauei 3 3
Amphimedon_queenslandica 1 1
Phytophthora_capsici_ 1 1
Chromobacterium_violaceum_ATCC_12472 1 1
Burkholderia_rhizoxinica_HKI_454 1 1
Burkholderia_phytofirmans_PsJN 1 1
Burkholderia_xenovorans_LB400 2 2
Ralstonia_eutropha_JMP134 2 2
Cupriavidus_taiwanensis_LMG_19424 1 1
Cupriavidus_metallidurans_CH34 5 5
Ralstonia_eutropha_H16 1 1
Ralstonia_pickettii_12D 2 2
Burkholderia_sp._RPE64 3 3
Burkholderia_sp._CCGE1002 1 1
Burkholderia_thailandensis_E264 2 2
Burkholderia_pseudomallei_1106a 4 4
Burkholderia_mallei_SAVP1 1 1
Burkholderia_ambifaria_AMMD 4 4
Burkholderia_cenocepacia_HI2424 1 1
Burkholderia_multivorans_ATCC_17616 2 2
Burkholderia_vietnamiensis_G4 1 1
Burkholderia_gladioli_BSR3 4 4
Burkholderia_glumae_BGR1 2 2
Delftia_sp._Cs1-4 1 1
Delftia_acidovorans_SPH-1 2 2
Comamonas_testosteroni_CNB-2 1 1
Collimonas_fungivorans_Ter331 2 2
Advenella_kashmirensis_WT001 1 1
Bordetella_petrii_DSM_12804 3 3
Bordetella_avium_197N 2 2
Bordetella_pertussis_Tohama_I 1 1
Bordetella_parapertussis_12822 1 1
Bordetella_bronchiseptica_RB50 1 1
Achromobacter_xylosoxidans_A8 3 3
Achromobacter_xylosoxidans 2 2
Gallibacterium_anatis_UMN179 3 3
Haemophilus_ducreyi_35000HP 1 1
Aeromonas_veronii_B565 1 1
Aeromonas_salmonicida_subsp._salmonicida_A449 1 1
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 1 1
Vibrio_harveyi_ATCC_BAA-1116 1 1
Vibrio_furnissii_NCTC_11218 4 4
Shewanella_sp._MR-4 1 1
Shewanella_putrefaciens_CN-32 2 2
Alcanivorax_borkumensis_SK2 1 1
Frateuria_aurantia_DSM_6220 2 2
Pseudoxanthomonas_suwonensis_11-1 1 1
Stenotrophomonas_maltophilia_K279a 2 2
Xylella_fastidiosa_M23 1 1
Photorhabdus_asymbiotica 7 7
Photorhabdus_luminescens_subsp._laumondii_TTO1 15 15
Xenorhabdus_bovienii_SS-2004 4 4
Xenorhabdus_nematophila_ATCC_19061 2 2
Providencia_stuartii_MRSN_2154 32 32
Proteus_mirabilis_HI4320 16 16
Edwardsiella_ictaluri_93-146 2 2
Edwardsiella_tarda_EIB202 5 5
Rahnella_sp._Y9602 5 5
Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 7 7
Yersinia_pseudotuberculosis_IP_31758 11 11
Yersinia_pestis_Pestoides_F 12 12
Yersinia_enterocolitica_subsp._enterocolitica_8081 10 10
Serratia_sp._AS12 5 5
Serratia_symbiotica_str._'Cinara_cedri' 1 1
Serratia_plymuthica_AS9 5 5
Serratia_proteamaculans_568 8 8
Pectobacterium_wasabiae_WPP163 1 1
Pectobacterium_sp._SCC3193 4 4
Pectobacterium_atrosepticum_SCRI1043 1 1
Pectobacterium_carotovorum_subsp._carotovorum_PC1 2 2
Pantoea_vagans_C9-1 5 5
Pantoea_ananatis_LMG_20103 6 6
Erwinia_tasmaniensis_Et1/99 14 14
Erwinia_sp._Ejp617 2 2
Erwinia_billingiae_Eb661 4 4
Erwinia_pyrifoliae_Ep1/96 2 2
Erwinia_amylovora_ATCC_49946 2 2
Escherichia_blattae_DSM_4481 1 1
Cronobacter_turicensis_z3032 6 6
Cronobacter_sakazakii_ES15 9 9
Enterobacteriaceae_bacterium_strain_FGI_57 14 14
Shigella_sonnei_Ss046 7 7
Shigella_flexneri_5_str._8401 8 8
Shigella_dysenteriae_Sd197 3 3
Shigella_boydii_CDC_3083-94 3 3
Salmonella_bongori_NCTC_12419 9 9
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_C_strain_RKS4594 13 13
Klebsiella_oxytoca_E718 15 15
Klebsiella_variicola_At-22 10 10
Klebsiella_pneumoniae_NTUH-K2044 9 9
Enterobacter_aerogenes_KCTC_2190 10 10
Escherichia_fergusonii_ATCC_35469 7 7
Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 9 9
Enterobacter_sp._R4-368 3 3
Enterobacter_sp._638 4 4
Enterobacter_asburiae_LF7a 9 9
Enterobacter_cloacae_subsp._dissolvens_SDM 8 8
Citrobacter_rodentium_ICC168 11 11
Citrobacter_koseri_ATCC_BAA-895 17 17
Pseudomonas_sp._TKP 5 5
Pseudomonas_sp._UW4 1 1
Pseudomonas_syringae_pv._tomato_str._DC3000 3 3
Pseudomonas_putida_F1 3 3
Pseudomonas_protegens_Pf-5 3 3
Pseudomonas_fluorescens_SBW25 4 4
Pseudomonas_aeruginosa_UCBPP-PA14 7 7
Pseudomonas_sp._VLB120 3 3
Psychrobacter_sp._PRwf-1 1 1
Acinetobacter_oleivorans_DR1 2 2
Acinetobacter_calcoaceticus_PHEA-2 2 2
Acinetobacter_baumannii_ATCC_17978 1 1
Acinetobacter_sp._ADP1 3 3

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Strains
Genome     Number   Proteins
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   2 2
Ralstonia_pickettii_12J 2 2
Burkholderia_sp._YI23 2 2
Burkholderia_sp._KJ006 2 2
Burkholderia_pseudomallei_MSHR305 3 3
Burkholderia_pseudomallei_NCTC_13179 3 3
Burkholderia_pseudomallei_BPC006 4 4
Burkholderia_pseudomallei_1026b 4 4
Burkholderia_pseudomallei_MSHR346 2 2
Burkholderia_pseudomallei_668 3 3
Burkholderia_pseudomallei_1710b 4 4
Burkholderia_pseudomallei_K96243 4 4
Burkholderia_mallei_NCTC_10229 1 1
Burkholderia_mallei_NCTC_10247 1 1
Burkholderia_mallei_ATCC_23344 1 1
Burkholderia_lata 1 1
Burkholderia_ambifaria_MC40-6 7 7
Burkholderia_cenocepacia_MC0-3 1 1
Burkholderia_cenocepacia_AU_1054 1 1
Burkholderia_cenocepacia_J2315 1 1
Burkholderia_multivorans_ATCC_17616 2 2
Burkholderia_cepacia_GG4 5 5
Variovorax_paradoxus_EPS 1 1
Bordetella_pertussis_CS 1 1
Bordetella_parapertussis_18323 1 1
Bordetella_parapertussis_Bpp5 1 1
Bordetella_bronchiseptica_MO149 1 1
Bordetella_bronchiseptica_253 1 1
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 3 3
Haemophilus_parasuis_ZJ0906 1 1
Haemophilus_influenzae_KR494 1 1
Haemophilus_influenzae_F3047 6 6
Haemophilus_influenzae_F3031 5 5
Haemophilus_influenzae_PittGG 1 1
Haemophilus_influenzae_R2866 1 1
Aeromonas_hydrophila_ML09-119 2 2
Shewanella_sp._W3-18-1 2 2
Shewanella_baltica_OS223 1 1
Shewanella_sp._MR-7 1 1
Shewanella_putrefaciens_200 2 2
Alcanivorax_dieselolei_B5 2 2
Stenotrophomonas_maltophilia_D457 1 1
Stenotrophomonas_maltophilia_JV3 4 4
Stenotrophomonas_maltophilia_R551-3 1 1
Xylella_fastidiosa_subsp._fastidiosa_GB514 1 1
Xylella_fastidiosa_M12 1 1
Xylella_fastidiosa_Temecula1 1 1
Xylella_fastidiosa_9a5c 1 1
Proteus_mirabilis_BB2000 16 16
Morganella_morganii_subsp._morganii_KT 10 10
Edwardsiella_tarda_C07-087 6 6
Edwardsiella_tarda_FL6-60 5 5
Rahnella_aquatilis_HX2 4 4
Yersinia_pseudotuberculosis_PB1/+ 11 11
Yersinia_pseudotuberculosis_YPIII 11 11
Yersinia_pseudotuberculosis_IP_32953 11 11
Yersinia_pestis_biovar_Microtus_str._91001 12 12
Yersinia_pestis_A1122 10 10
Yersinia_pestis_Z176003 9 9
Yersinia_pestis_D182038 12 12
Yersinia_pestis_D106004 12 12
Yersinia_pestis_biovar_Medievalis_str._Harbin_35 10 10
Yersinia_pestis_Nepal516 10 10
Yersinia_pestis_Antiqua 12 12
Yersinia_pestis_Angola 10 10
Yersinia_pestis_CO92 12 12
Yersinia_pestis_KIM10+ 12 12
Yersinia_enterocolitica_subsp._palearctica_105.5R(r) 10 10
Yersinia_enterocolitica_subsp._palearctica_Y11 10 10
Serratia_sp._AS13 5 5
Serratia_plymuthica_S13 6 6
Serratia_plymuthica_4Rx13 6 6
Serratia_marcescens_FGI94 6 6
Serratia_marcescens_WW4 11 11
Serratia_liquefaciens_ATCC_27592 4 4
Pectobacterium_carotovorum_subsp._carotovorum_PCC21 1 1
Pantoea_ananatis_LMG_5342 9 9
Pantoea_ananatis_PA13 7 7
Pantoea_ananatis_AJ13355 9 9
Erwinia_pyrifoliae_DSM_12163 2 2
Erwinia_amylovora_CFBP1430 2 2
Cronobacter_sakazakii_CMCC_45402 6 6
Cronobacter_sakazakii_SP291 8 8
Cronobacter_sakazakii_ATCC_BAA-894 8 8
Raoultella_ornithinolytica_B6 6 6
Shigella_sonnei_53G 11 11
Shigella_flexneri_2002017 7 7
Shigella_flexneri_2a_str._2457T 6 6
Shigella_flexneri_2a_str._301 5 5
Shigella_dysenteriae_1617 3 3
Shigella_boydii_Sb227 4 4
Salmonella_bongori_N268-08 10 10
Salmonella_enterica_subsp._arizonae_serovar_62:z4,z23:--_str._RSK2980 5 5
Salmonella_enterica_subsp._enterica_serovar_4,[5],12:i:-_str._08-1736 13 13
Salmonella_enterica_subsp._enterica_serovar_Javiana_str._CFSAN001992 13 13
Salmonella_enterica_subsp._enterica_serovar_Schwarzengrund_str._CVM19633 13 13
Salmonella_enterica_subsp._enterica_Serovar_Cubana_str._CFSAN002050 15 15
Salmonella_enterica_subsp._enterica_serovar_Enteritidis_str._P125109 14 14
Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67 12 12
Salmonella_enterica_subsp._enterica_serovar_Newport_str._USMARC-S3124.1 15 15
Salmonella_enterica_subsp._enterica_serovar_Newport_str._SL254 15 15
Salmonella_enterica_subsp._enterica_serovar_Dublin_str._CT_02021853 13 13
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_var._5-_str._CFSAN001921 13 13
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._U288 14 14
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._798 14 14
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._UK-1 14 14
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._ST4/74 14 14
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._T000240 14 14
Salmonella_enterica_The_genome_of__subsp._enterica_serovar_Typhimurium_str._DT2 13 13
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._D23580 13 13
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344 14 14
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._14028S 14 14
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 14 14
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_Definitive_Type_104 13 13
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._P-stx-12 13 13
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty21a 13 13
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18 13 13
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2 13 13
Salmonella_enterica_serovar_Bovismorbificans_genomics 14 14
Salmonella_enterica_subsp._enterica_serovar_Bareilly_str._CFSAN000189 18 18
Salmonella_enterica_subsp._enterica_serovar_Agona_str._24249 15 15
Salmonella_enterica_subsp._enterica_serovar_Agona_str._SL483 15 15
Salmonella_enterica_subsp._enterica_serovar_Weltevreden_str._2007-60-3289-1 12 12
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_B_str._SPB7 14 14
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._AKU_12601 13 13
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._ATCC_9150 13 13
Salmonella_enterica_subsp._enterica_Serovar_Heidelberg_str._CFSAN002069 14 14
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._B182 14 14
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._41578 14 14
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._SL476 14 14
Salmonella_enterica_subsp._enterica_serovar_Pullorum_str._S06004 11 11
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._CDC1983-67 11 11
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._RKS5078 11 11
Salmonella_enterica_subsp._enterica_serovar_Thompson_str._RM6836 15 15
Salmonella_enterica_subsp._enterica_serovar_Gallinarum_str._287/91 12 12
Klebsiella_oxytoca_KCTC_1686 14 14
Klebsiella_pneumoniae_JM45 8 8
Klebsiella_pneumoniae_CG43 12 12
Klebsiella_pneumoniae_KCTC_2242 11 11
Klebsiella_pneumoniae_342 10 10
Klebsiella_pneumoniae_subsp._pneumoniae_1084 9 9
Klebsiella_pneumoniae_subsp._pneumoniae_HS11286 6 6
Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578 14 14
Klebsiella_pneumoniae_subsp._rhinoscleromatis_SB3432 7 7
Enterobacter_aerogenes_EA1509E 9 9
Escherichia_coli_E24377A 12 12
Escherichia_coli_E._coli_PMV-1 9 9
Escherichia_coli_JJ1886 8 8
Escherichia_coli_LY180 12 12
Escherichia_coli_APEC_O78 12 12
Escherichia_coli_O7:K1_str._CE10 11 11
Escherichia_coli_O104:H4_str._2009EL-2050 12 12
Escherichia_coli_O104:H4_str._2009EL-2071 12 12
Escherichia_coli_O104:H4_str._2011C-3493 12 12
Escherichia_coli_NA114 6 6
Escherichia_coli_P12b 7 7
Escherichia_coli_str._'clone_D_i2' 9 9
Escherichia_coli_str._'clone_D_i14' 9 9
Escherichia_coli_UM146 11 11
Escherichia_coli_042 11 11
Escherichia_coli_Xuzhou21 14 14
Escherichia_coli_IHE3034 9 9
Escherichia_coli_UMNK88 11 11
Escherichia_coli_O83:H1_str._NRG_857C 9 9
Escherichia_coli_ABU_83972 10 10
Escherichia_coli_KO11FL 14 14
Escherichia_coli_KO11FL 14 14
Escherichia_coli_LF82 9 9
Escherichia_coli_ED1a 8 8
Escherichia_coli_IAI39 11 11
Escherichia_coli_UMN026 12 12
Escherichia_coli_55989 12 12
Escherichia_coli_S88 8 8
Escherichia_coli_IAI1 13 13
Escherichia_coli_W 14 14
Escherichia_coli_W 14 14
Escherichia_coli_DH1 11 11
Escherichia_coli_DH1 11 11
Escherichia_coli_ATCC_8739 9 9
Escherichia_coli_BL21(DE3) 9 9
Escherichia_coli_BL21(DE3) 9 9
Escherichia_coli_SMS-3-5 9 9
Escherichia_coli_SE15 8 8
Escherichia_coli_SE11 17 17
Escherichia_coli_APEC_O1 9 9
Escherichia_coli_O103:H2_str._12009 12 12
Escherichia_coli_UTI89 11 11
Escherichia_coli_536 11 11
Escherichia_coli_HS 10 10
Escherichia_coli_ETEC_H10407 10 10
Escherichia_coli_O55:H7_str._RM12579 14 14
Escherichia_coli_O55:H7_str._CB9615 14 14
Escherichia_coli_O26:H11_str._11368 13 13
Escherichia_coli_CFT073 11 11
Escherichia_coli_O111:H-_str._11128 12 12
Escherichia_coli_O127:H6_str._E2348/69 4 4
Escherichia_coli_O157:H7_str._TW14359 14 14
Escherichia_coli_O157:H7_str._EC4115 13 13
Escherichia_coli_O157:H7_str._Sakai 14 14
Escherichia_coli_O157:H7_str._EDL933 15 15
Escherichia_coli_str._K-12_substr._MDS42 8 8
Escherichia_coli_BW2952 11 11
Escherichia_coli_str._K-12_substr._MG1655 11 11
Escherichia_coli_str._K-12_substr._W3110 11 11
Escherichia_coli_str._K-12_substr._DH10B 10 10
Escherichia_coli_B_str._REL606 9 9
Enterobacter_cloacae_SCF1 15 15
Enterobacter_cloacae_EcWSU1 7 7
Enterobacter_cloacae_subsp._cloacae_ENHKU01 12 12
Enterobacter_cloacae_subsp._cloacae_NCTC_9394 11 11
Enterobacter_cloacae_subsp._cloacae_ATCC_13047 12 12
Pseudomonas_denitrificans_ATCC_13867 3 3
Pseudomonas_syringae_pv._phaseolicola_1448A 3 3
Pseudomonas_syringae_pv._syringae_B728a 3 3
Pseudomonas_monteilii_SB3101 1 1
Pseudomonas_monteilii_SB3078 1 1
Pseudomonas_putida_H8234 1 1
Pseudomonas_putida_HB3267 1 1
Pseudomonas_putida_NBRC_14164 1 1
Pseudomonas_putida_DOT-T1E 3 3
Pseudomonas_putida_S16 1 1
Pseudomonas_putida_BIRD-1 2 2
Pseudomonas_putida_W619 1 1
Pseudomonas_putida_ND6 3 3
Pseudomonas_putida_KT2440 1 1
Pseudomonas_putida_GB-1 2 2
Pseudomonas_protegens_CHA0 3 3
Pseudomonas_poae_RE*1-1-14 4 4
Pseudomonas_fluorescens_A506 6 6
Pseudomonas_fluorescens_R124 2 2
Pseudomonas_fluorescens_Pf0-1 1 1
Pseudomonas_resinovorans_NBRC_106553 2 2
Pseudomonas_aeruginosa_SCV20265 5 5
Pseudomonas_aeruginosa_MTB-1 5 5
Pseudomonas_aeruginosa_LES431 6 6
Pseudomonas_aeruginosa_RP73 6 6
Pseudomonas_aeruginosa_B136-33 5 5
Pseudomonas_aeruginosa_PA1R 4 4
Pseudomonas_aeruginosa_PA1 5 5
Pseudomonas_aeruginosa_DK2 6 6
Pseudomonas_aeruginosa_NCGM2.S1 4 4
Pseudomonas_aeruginosa_M18 6 6
Pseudomonas_aeruginosa_LESB58 6 6
Pseudomonas_aeruginosa_PA7 5 5
Pseudomonas_aeruginosa_PAO1 6 6
Acinetobacter_genomosp._13TU__RUH2624 2 2
Acinetobacter_sp.__SH024 2 2
Acinetobacter_calcoaceticus_ruh2202 2 2
Acinetobacter_baumannii_ZW85-1 2 2
Acinetobacter_baumannii_TYTH-1 2 2
Acinetobacter_baumannii_BJAB0868 2 2
Acinetobacter_baumannii_BJAB0715 2 2
Acinetobacter_baumannii_BJAB07104 2 2
Acinetobacter_baumannii_TCDC-AB0715 3 3
Acinetobacter_baumannii_D1279779 1 1
Acinetobacter_baumannii_MDR-TJ 2 2
Acinetobacter_baumannii_1656-2 2 2
Acinetobacter_baumannii__ATCC_19606 2 2
Acinetobacter_baumannii_AB307-0294 2 2
Acinetobacter_baumannii_AYE 2 2
Acinetobacter_baumannii_MDR-ZJ06 2 2
Acinetobacter_baumannii_AB0057 2 2
Acinetobacter_baumannii_ACICU 2 2
Acinetobacter_junii__SH205 1 1

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Others
Genome     Number   Proteins
Ricinus_communis__(Early_assembly)   (Castor bean)   1 1
Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 1 1
NCBI_plasmid_sequences_(Plasmids) 85 85
PDB_chains_(SCOP_1.75)_(PDB) 11 11
Protein_Data_Bank_(all_PDB_sequenc) 113 113
TargetDB__(Targets) 15 15
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 290 290
STRING_v9.0.5_(STRING) 1000 1000
Uniprot_2018_03_genome 14864 14864
NCBI_2017_08_genome 273098 273093

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