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Domain combinations for Amine oxidase catalytic domain superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Amine oxidase catalytic domain domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   16 16
Pan_troglodytes_76_2.1.4   (Chimpanzee)   4 4
Gorilla_gorilla_76_3.1   (Western gorilla)   3 3
Pongo_abelii_76_2   (Sumatran orangutan)   4 4
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   3 2
Papio_anubis_76   (Olive baboon)   4 4
Macaca_mulatta_76_1   (Rhesus monkey)   5 5
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   8 8
Otolemur_garnettii_76_3   (Small-eared galago)   4 4
Microcebus_murinus_76_1   (Gray mouse lemur)   2 2
Rattus_norvegicus_76_5.0   (Norway rat)   5 5
Mus_musculus_76_38   (House mouse)   12 12
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   3 3
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   4 4
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   5 3
Cavia_porcellus_76_3   (Domestic guinea pig)   4 4
Oryctolagus_cuniculus_76_2   (Rabbit)   2 2
Ochotona_princeps_76   (American pika)   3 3
Tupaia_belangeri_76   (Northern tree shrew)   5 4
Sus_scrofa_76_10.2   (Pig)   3 3
Bos_taurus_76_3.1   (Cattle)   7 7
Ovis_aries_76_3.1   (Sheep)   9 7
Tursiops_truncatus_76_1   (Bottlenose dolphin)   4 3
Mustela_putorius_furo_76_1.0   (Domestic ferret)   4 4
Ailuropoda_melanoleuca_76_1   (Giant panda)   4 4
Canis_familiaris_76_3.1   (Dog)   5 5
Felis_catus_76_6.2   (Domestic cat)   3 3
Equus_caballus_76_2   (Horse)   4 4
Myotis_lucifugus_76_2.0   (Little brown bat)   8 8
Pteropus_vampyrus_76_1   (Large flying fox)   5 3
Sorex_araneus_76_1   (European shrew)   3 3
Erinaceus_europaeus_76   (Western European hedgehog)   2 2
Procavia_capensis_76_1   (Cape rock hyrax)   4 3
Loxodonta_africana_76_3   (African savanna elephant)   3 3
Echinops_telfairi_76   (Small Madagascar hedgehog)   4 3
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   5 5
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   1 1
Macropus_eugenii_76_1.0   (Tammar wallaby)   3 3
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   2 2
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   2 2
Ornithorhynchus_anatinus_76_5   (Platypus)   4 3
Petromyzon_marinus_76_7.0   (Sea lamprey)   4 4
Meleagris_gallopavo_76_2   (Turkey)   2 2
Gallus_gallus_76_4   (Chicken)   1 1
Anas_platyrhynchos_76_1.0   (Mallard)   2 2
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   1 1
Ficedula_albicollis_76_1.0   (Collared flycatcher)   2 2
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   2 2
Anolis_carolinensis_76_2.0   (Green anole)   4 4
Xenopus_laevis_   (African clawed frog)   3 3
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   3 3
Latimeria_chalumnae_76_1   (Coelacanth)   3 3
Lepisosteus_oculatus_76   (Spotted gar)   2 2
Gadus_morhua_76_1   (Atlantic cod)   2 2
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   3 3
Takifugu_rubripes_76_4   (Torafugu)   3 3
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   3 3
Oryzias_latipes_76_1   (Japanese medaka)   3 3
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   2 2
Poecilia_formosa_76   (Amazon molly)   2 2
Oreochromis_niloticus_76_1.0   (Nile tilapia)   3 3
Astyanax_mexicanus_76   (Mexican tetra)   2 2
Danio_rerio_76_9   (Zebrafish)   3 3
Adineta_vaga 4 4
Octopus_bimaculoides_280 3 3
Crassostrea_gigas_22   (Pacific oyster)   10 10
Lottia_gigantea_   (Owl limpet)   9 9
Hymenolepis_microstoma_ 1 1
Echinococcus_multilocularis_ 1 1
Echinococcus_granulosus_ 1 1
Taenia_solium_   (Pork tapeworm)   1 1
Schistosoma_mansoni_ 2 2
Acropora_digitifera_v1.0 4 4
Nematostella_vectensis_1.0   (Starlet sea anemone)   4 4
Sphaeroforma_arctica_JP610_ 1 1
Capsaspora_owczarzaki_ATCC_30864_ 2 2
Phycomyces_blakesleeanus_ 1 1
Rhizopus_oryzae_RA_99-880_ 2 2
Mucor_circinelloides_ 1 1
Rhizomucor_miehei_CAU432_ 1 1
Sporisorium_reilianum_22 2 2
Ustilago_maydis_ 2 2
Mixia_osmundae_IAM_14324_v1.0 2 2
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 2 2
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 1 1
Melampsora_laricis-populina_ 1 1
Rhodotorula_graminis_WP1_v1.0 2 2
Sporobolomyces_roseus_IAM_13481_ 2 2
Microbotryum_violaceum_22 1 1
Wallemia_sebi_v1.0 3 3
Sphaerobolus_stellatus_v1.0 4 4
Piloderma_croceum_F_1598_v1.0 3 3
Serpula_lacrymans_var._lacrymans_S7.9_ 2 2
Coniophora_puteana 2 2
Hydnomerulius_pinastri_v2.0 2 2
Paxillus_rubicundulus_Ve08.2h10_v1.0 2 2
Pisolithus_microcarpus_441_v1.0 3 3
Pisolithus_tinctorius_Marx_270_v1.0 2 2
Scleroderma_citrinum_Foug_A_v1.0 1 1
Coprinopsis_cinerea_okayama7_130_v3 5 5
Pleurotus_ostreatus_   (Oyster mushroom)   3 3
Amanita_thiersii_Skay4041_v1.0 2 2
Amanita_muscaria_Koide_v1.0   (Fly agaric)   1 1
Galerina_marginata_v1.0 2 2
Hebeloma_cylindrosporum_h7_v2.0 2 2
Laccaria_bicolor_S238N-H82_ 3 3
Agaricus_bisporus_var._bisporus_ 3 3
Schizophyllum_commune_ 2 2
Stereum_hirsutum_FP-91666_SS1__v1.0 3 3
Heterobasidion_annosum_ 1 1
Gloeophyllum_trabeumv1.0 2 2
Punctularia_strigosozonata_v1.0 2 2
Sebacina_vermifera_MAFF_305830_v1.0 1 1
Fomitiporia_mediterranea_v1.0 1 1
Tulasnella_calospora_AL13/4D_v1.0 3 3
Postia_placenta_ 3 3
Wolfiporia_cocos_MD-104_SS10__v1.0 2 2
Fomitopsis_pinicolav1.0 2 2
Fomitopsis_pinicola_FP-58527_SS1_v3.0 2 2
Phanerochaete_chrysosporium_RP-78_2.1 2 2
Dichomitus_squalens 2 2
Trametes_versicolor_v1.0 2 2
Tremella_mesenterica_   (Witches' butter)   1 1
Daldinia_eschscholzii_EC12_v1.0 3 3
Apiospora_montagnei_NRRL_25634_v1.0 8 8
Magnaporthe_poae_ATCC_64411_22 8 7
Magnaporthe_grisea_70-15_ 7 7
Podospora_anserina_ 4 4
Sporotrichum_thermophile_ATCC_42464_ 3 2
Thielavia_terrestris_NRRL_8126_ 2 2
Chaetomium_globosum_CBS_148.51_ 2 2
Neurospora_tetrasperma_ 2 2
Neurospora_discreta_FGSC_8579_ 2 2
Neurospora_crassa_OR74A_ 2 2
Cryphonectria_parasitica_   (Chestnut blight fungus)   5 5
Verticillium_albo-atrum_VaMs.102_ 8 8
Verticillium_dahliae_VdLs.17_ 6 6
Acremonium_alcalophilumv_1.0 2 2
Glomerella_graminicola_22 7 7
Fusarium_graminearum_ 8 8
Nectria_haematococca_mpVI_ 14 14
Fusarium_oxysporum_f._sp._lycopersici_4286_ 13 13
Fusarium_verticillioides_7600_ 11 11
Trichoderma_asperellum_CBS_433.97_v1.0 3 3
Trichoderma_atroviride_ 3 3
Trichoderma_citrinoviride_v1.0 4 4
Trichoderma_reesei_1.2 2 2
Trichoderma_virens_Gv29-8_ 4 4
Trichoderma_longibrachiatum_ATCC_18648_v1.0 2 2
Trichoderma_harzianum_CBS_226.95_v1.0 4 4
Amorphotheca_resinae_v1.0   (Creosote fungus)   4 4
Botrytis_cinerea_B05.10_ 3 3
Sclerotinia_sclerotiorum_ 3 3
Didymella_exigua_CBS_183.55_v1.0 5 5
Leptosphaeria_maculans_22 3 3
Setosphaeria_turcica_v1.0 6 6
Cochliobolus_miyabeanus_ATCC_44560_v1.0 5 5
Cochliobolus_victoriae_FI3_v1.0 7 7
Cochliobolus_carbonum_26-R-13_v1.0 6 6
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   4 4
Alternaria_brassicicola_ 4 4
Cochliobolus_lunatus_m118_v2.0 6 6
Pyrenophora_teres_f._teres_22 4 4
Pyrenophora_tritici-repentis_ 3 3
Stagonospora_nodorum_ 7 7
Mycosphaerella_graminicola_IPO323_ 3 3
Zasmidium_cellare_ATCC_36951_v1.0 7 7
Dothistroma_septosporum 4 4
Septoria_musiva_v1.0 2 2
Mycosphaerella_fijiensis_CIRAD86_ 3 3
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 4 4
Paracoccidioides_brasiliensis_Pb18_ 5 4
Coccidioides_posadasii_RMSCC_3488_ 6 6
Coccidioides_immitis_RS_ 6 6
Ajellomyces_dermatitidis_SLH14081_ 5 5
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 4 4
Microsporum_canis_CBS_113480_ 1 1
Trichophyton_equinum_CBS_127.97_ 2 2
Trichophyton_verrucosum_HKI_0517_ 2 2
Arthroderma_benhamiae_CBS_112371_ 2 2
Trichophyton_tonsurans_CBS_112818_ 2 2
Trichophyton_rubrum_CBS_118892_ 2 2
Uncinocarpus_reesii_1704_ 6 6
Aspergillus_zonatus_v1.0 6 6
Penicillium_chrysogenum_Wisconsin_54-1255_ 7 7
Penicillium_chrysogenum_v1.0 6 6
Aspergillus_acidus_v1.0 8 8
Aspergillus_fumigatus_Af293 7 7
Aspergillus_brasiliensis_v1.0 7 7
Aspergillus_nidulans_FGSC_A4_ 6 6
Aspergillus_sydowii_v1.0 7 7
Aspergillus_versicolor_v1.0 9 9
Aspergillus_glaucus 6 6
Aspergillus_carbonarius_ITEM_5010_ 5 5
Neosartorya_fischeri_NRRL_181_ 7 7
Aspergillus_terreus_NIH2624_ 6 6
Aspergillus_tubingensis_v1.0 9 9
Aspergillus_wentii_v1.0 7 7
Aspergillus_oryzae_RIB40_ 7 7
Aspergillus_niger_22 6 6
Aspergillus_niger_ATCC_1015_ 3 3
Aspergillus_flavus_NRRL3357_ 8 8
Aspergillus_clavatus_NRRL_1_ 5 5
Penicillium_marneffei_ATCC_18224_ 7 7
Tuber_melanosporum_Mel28_22 2 2
Tuber_melanosporum_Vittad_   (Perigord truffle)   3 3
Hansenula_polymorpha_v2.0 3 2
Dekkera_bruxellensis_CBS_2499_v2.0 1 1
Pichia_membranifaciensv1.0 2 2
Candida_tanzawaensis_NRRL_Y-17324__v1.0 2 2
Candida_dubliniensis_CD36_ 2 2
Candida_tropicalis_MYA-3404_ 2 2
Candida_parapsilosis_ 2 2
Candida_albicans_SC5314 2 2
Lodderomyces_elongisporus_NRRL_YB-4239_ 2 2
Babjeviella_inositovora_NRRL_Y-12698_v1.0 3 3
Pichia_stipitis_CBS_6054_ 2 2
Candida_guilliermondii_ATCC_6260_ 2 2
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 2 2
Debaromyces_hansenii 2 2
Wickerhamomyces_anomalus 4 4
Pichia_pastoris_GS115_ 3 3
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 1 1
Yarrowia_lipolytica_CLIB122 3 3
Candida_lusitaniae_ATCC_42720_ 2 2
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 3 3
Kluyveromyces_thermotolerans_CBS_6340 1 1
Lachancea_kluyveri_ 1 1
Kluyveromyces_waltii 1 1
Ashbya_gossypii_ATCC_10895_ 1 1
Zygosaccharomyces_rouxii_ 1 1
Kluyveromyces_lactis 1 1
Schizosaccharomyces_cryophilus_OY26_22 1 1
Schizosaccharomyces_octosporus_yFS286_ 1 1
Schizosaccharomyces_pombe   (Fission yeast)   2 2
Spizellomyces_punctatus_DAOM_BR117_ 1 1
Selaginella_moellendorffii_ 4 4
Pinus_taeda   (Loblolly pine)   16 14
Picea_abies   (Norway spruce)   3 3
Eucalyptus_grandis_v201   (Rose gum)   11 10
Theobroma_cacao_B97-61/B2_v1   (Cacao)   11 10
Gossypium_raimondii_v221 29 29
Citrus_clementina_v165 8 8
Citrus_sinensis_v154   (Sweet orange)   15 15
Thellungiella_halophila_v173 6 6
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   9 9
Capsella_rubella_v183 7 7
Arabidopsis_lyrata_   (Lyrate rockcress)   11 11
Arabidopsis_thaliana_10   (Thale cress)   10 10
Carica_papaya_   (Papaya)   6 6
Medicago_truncatula_   (Barrel medic)   21 21
Phaseolus_vulgaris_v186   (French bean)   16 15
Glycine_max_v109   (Soybean)   20 19
Cucumis_sativus_v122   (Cucumber)   8 8
Fragaria_vesca_   (Wild strawberry)   11 11
Malus_domestica_v196   (Apple)   22 21
Prunus_persica_v139   (Peach)   6 6
Linum_usitatissimum_v200   (Flax)   17 16
Manihot_esculenta_v147   (Cassava)   10 10
Populus_trichocarpa_v156   (Black cottonwood)   9 9
Vitis_vinifera_   (Wine grape)   9 9
Mimulus_guttatus_v140   (Spotted monkey flower)   5 5
Solanum_lycopersicum_v.2.3   (Tomato)   8 8
Solanum_tuberosum_   (Potato)   16 16
Actinidia_chinensis_Hongyang_ 13 11
Aquilegia_coerulea_v195 11 11
Triticum_urartu_22 4 4
Triticum_aestivum_22   (Bread wheat)   15 15
Aegilops_tauschii_22 3 3
Brachypodium_distachyon_   (Stiff brome)   6 6
Oryza_barthii_22   (African wild rice)   7 7
Oryza_meridionalis_22 10 10
Oryza_glumaepatula_22 7 6
Oryza_glaberrima   (African rice)   6 6
Oryza_punctata_22 10 10
Oryza_nivara_22 8 8
Oryza_brachyantha_22   (Malo sina)   14 14
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   7 7
Oryza_sativa_v193   (Rice)   7 7
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   6 5
Panicum_virgatum_v202   (Switchgrass)   18 18
Setaria_italica_v164   (Foxtail millet)   4 4
Zea_mays_subsp._mays_   (Maize)   10 10
Zea_mays_v181   (Maize)   10 10
Sorghum_bicolor_   (Sorghum)   7 7
Musa_balbisiana   (Balbis banana)   11 8
Musa_acuminata_22   (Wild Malaysian banana)   8 8
Amborella_trichopoda_22 6 6
Physcomitrella_patens 5 5
Coccomyxa_subellipsoidea_sp._C-169_v2 4 4
Asterochloris_sp._Cgr/DA1pho_v1.0 2 2
Chlorella_variabilis_sp._NC64A_ 2 2
Chlorella_vulgaris_ 4 4
Volvox_carteri_f._nagariensis_ 2 2
Volvox_carteri_v199 1 1
Chlamydomonas_reinhardtii_4.0 3 3
Bathycoccus_prasinos_ 1 1
Micromonas_sp._RCC299_ 1 1
Micromonas_pusilla_CCMP1545_v3.0 1 1
Cyanidioschyzon_merolae_strain_10D_22 3 3
Cyanidioschyzon_merolae 3 3
Porphyridium_purpureum_02_2012 1 1
Ectocarpus_siliculosus 2 2
Aureococcus_anophagefferens_ 1 1
Pythium_iwayamai_DAOM_BR242034_22 1 1
Pythium_arrhenomanes_ATCC_12531_22 1 1
Pythium_irregulare_DAOM_BR486_22 1 1
Pythium_vexans_DAOM_BR484_22 2 2
Phytophthora_ramorum_1.1   (Sudden oak death agent)   4 4
Phytophthora_sojae_1.1 8 8
Phytophthora_infestans_T30-4_ 3 3
Phytophthora_capsici_ 3 3
Phaeodactylum_tricornutumCCAP_1055/1 1 1
Fragilariopsis_cylindrus 2 2
Cryptosporidium_hominis 1 1
Cryptosporidium_muris 1 1
Cryptosporidium_parvum_Iowa_II 1 1
Neospora_caninum 1 1
Toxoplasma_gondii_VEG 1 1
Toxoplasma_gondii_ME49 1 1
Toxoplasma_gondii_GT1 1 1
Symbiodinium_minutum_clade_B1_v1.2 5 5
Emiliania_huxleyi_CCMP1516_ 5 5
Synechococcus_sp._PCC_6312 1 1
Trichodesmium_erythraeum_IMS101 1 1
Gloeocapsa_sp._PCC_7428 1 1
Calothrix_sp._PCC_7507 1 1
Anabaena_variabilis_ATCC_29413 1 1
Nostoc_sp._PCC_7107 1 1
Nostoc_punctiforme_PCC_73102 1 1
Nostoc_sp._PCC_7120 1 1
Nostoc_sp._PCC_7524 1 1
Anabaena_sp._90 1 1
Conexibacter_woesei_DSM_14684 1 1
Nakamurella_multipartita_DSM_44233 1 1
Modestobacter_marinus 2 2
Blastococcus_saxobsidens_DD2 1 1
Geodermatophilus_obscurus_DSM_43160 2 2
Catenulispora_acidiphila_DSM_44928 1 1
Frankia_sp._EAN1pec 1 1
Streptosporangium_roseum_DSM_43021 2 2
Streptomyces_bingchenggensis_BCW-1 2 2
Streptomyces_violaceusniger_Tu_4113 2 2
Streptomyces_avermitilis_MA-4680 1 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1 1
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 2 2
Pseudonocardia_dioxanivorans_CB1190 2 2
Microlunatus_phosphovorus_NM-1 1 1
Micromonospora_sp._L5 1 1
Micromonospora_aurantiaca_ATCC_27029 1 1
Actinoplanes_sp._N902-109 2 2
Actinoplanes_sp._SE50/110 1 1
Gordonia_polyisoprenivorans_VH2 3 3
Rhodococcus_jostii_RHA1 4 4
Rhodococcus_opacus_B4 3 3
Nocardia_farcinica_IFM_10152 1 1
Mycobacterium_abscessus_ATCC_19977 1 1
Mycobacterium_sp._JLS 1 1
Mycobacterium_vanbaalenii_PYR-1 2 2
Mycobacterium_gilvum_PYR-GCK 2 2
Mycobacterium_chubuense_NBB4 1 1
Mycobacterium_marinum_M 1 1
Mycobacterium_smegmatis_str._MC2_155 2 2
Microbacterium_testaceum_StLB037 2 2
Xylanimonas_cellulosilytica_DSM_15894 1 1
Arthrobacter_chlorophenolicus_A6 1 1
Arthrobacter_aurescens_TC1 4 4
Arthrobacter_arilaitensis_Re117 1 1
Arthrobacter_sp._Rue61a 2 2
Arthrobacter_sp._FB24 1 1
Sphaerobacter_thermophilus_DSM_20745 1 1
Herpetosiphon_aurantiacus_DSM_785 2 2
Roseiflexus_sp._RS-1 1 1
Roseiflexus_castenholzii_DSM_13941 1 1
Paenibacillus_sp._JDR-2 2 2
Bacillus_sp._1NLA3E 1 1
Candidatus_Solibacter_usitatus_Ellin6076 2 2
Terriglobus_saanensis_SP1PR4 1 1
Candidatus_Nitrospira_defluvii 1 1
Nitratifractor_salsuginis_DSM_16511 1 1
Haliangium_ochraceum_DSM_14365 1 1
Stigmatella_aurantiaca_DW4/3-1 1 1
Burkholderia_phytofirmans_PsJN 1 1
Ralstonia_solanacearum_CFBP2957 1 1
Herbaspirillum_seropedicae_SmR1 1 1
Pseudovibrio_sp._FO-BEG1 1 1
Tistrella_mobilis_KA081020-065 1 1
Rhizobium_leguminosarum_bv._viciae_3841 1 1
Agrobacterium_radiobacter_K84 1 1
Mesorhizobium_loti_MAFF303099 1 1
Hyphomicrobium_sp._MC1 1 1
Bradyrhizobium_sp._ORS_278 1 1
Legionella_pneumophila_str._Corby 1 1
Escherichia_blattae_DSM_4481 1 1
Enterobacteriaceae_bacterium_strain_FGI_57 1 1
Klebsiella_oxytoca_E718 1 1
Klebsiella_variicola_At-22 1 1
Klebsiella_pneumoniae_NTUH-K2044 1 1
Enterobacter_aerogenes_KCTC_2190 1 1
Escherichia_fergusonii_ATCC_35469 1 1
Enterobacter_asburiae_LF7a 1 1
Enterobacter_cloacae_subsp._dissolvens_SDM 1 1
Acinetobacter_oleivorans_DR1 1 1
Acinetobacter_calcoaceticus_PHEA-2 1 1
Acinetobacter_baumannii_ATCC_17978 1 1
Sulfolobus_solfataricus_P2 1 1
Sulfolobus_acidocaldarius_DSM_639 1 1
Halalkalicoccus_jeotgali_B3 2 2

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   4 4
Cryptococcus_neoformans_var._grubii_H99_ 1 1
Cryptococcus_neoformans_B-3501A_ 2 2
Cryptococcus_neoformans_JEC21_ 1 1
Paracoccidioides_brasiliensis_Pb01_ 4 4
Paracoccidioides_brasiliensis_Pb03_ 6 5
Coccidioides_posadasii_str._Silveira_ 6 6
Coccidioides_immitis_RMSCC_3703_ 6 6
Coccidioides_immitis_RMSCC_2394_ 6 6
Coccidioides_immitis_H538.4_ 6 6
Ajellomyces_dermatitidis_ER-3_ 5 5
Histoplasma_capsulatum_H143 4 4
Histoplasma_capsulatum_H88 4 4
Histoplasma_capsulatum_G186AR 4 4
Aspergillus_fumigatus_A1163_ 6 6
Candida_albicans_WO-1_ 2 2
Schizosaccharomyces_pombe_972h-_ 2 2
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   9 9
Hordeum_vulgare_22   (Domesticated barley)   7 7
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   8 8
Neospora_caninum_Nc-Liverpool_6.2 1 1
Chroococcidiopsis_thermalis_PCC_7203 1 1
Synechococcus_sp._JA-2-3B'a(2-13) 1 1
Synechococcus_sp._JA-3-3Ab 1 1
Cyanothece_sp._PCC_7425 1 1
Cylindrospermum_stagnale_PCC_7417 1 1
Anabaena_cylindrica_PCC_7122 1 1
Frankia_sp._EuI1c 1 1
Streptomyces_rapamycinicus_NRRL_5491 3 3
Streptomyces_davawensis_JCM_4913 1 1
Streptomyces_venezuelae_ATCC_10712 1 1
Streptomyces_collinus_Tu_365 1 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1 1
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 2 2
Saccharothrix_espanaensis_DSM_44229 1 1
Amycolatopsis_orientalis_HCCB10007 1 1
Actinoplanes_friuliensis_DSM_7358 1 1
Mycobacterium_abscessus_subsp._bolletii_50594 1 1
Mycobacterium_sp._KMS 1 1
Mycobacterium_sp._MCS 1 1
Mycobacterium_gilvum_Spyr1 2 2
Mycobacterium_smegmatis_str._MC2_155 2 2
Paenibacillus_mucilaginosus_KNP414 1 1
Ralstonia_solanacearum_Po82 1 1
Acetobacter_pasteurianus_386B 1 1
Rhodopseudomonas_palustris_HaA2 1 1
Bradyrhizobium_sp._S23321 2 2
Bradyrhizobium_sp._BTAi1 1 1
Bradyrhizobium_japonicum_USDA_6 1 1
Legionella_pneumophila_str._Paris 1 1
Legionella_pneumophila_subsp._pneumophila_LPE509 1 1
Legionella_pneumophila_subsp._pneumophila_str._Thunder_Bay 1 1
Legionella_pneumophila_subsp._pneumophila_str._Philadelphia_1 1 1
Legionella_pneumophila_subsp._pneumophila 1 1
Legionella_pneumophila_subsp._pneumophila 1 1
Legionella_pneumophila_subsp._pneumophila_ATCC_43290 1 1
Legionella_pneumophila_2300/99_Alcoy 1 1
Raoultella_ornithinolytica_B6 1 1
Klebsiella_oxytoca_KCTC_1686 1 1
Klebsiella_pneumoniae_CG43 1 1
Klebsiella_pneumoniae_KCTC_2242 1 1
Klebsiella_pneumoniae_342 1 1
Klebsiella_pneumoniae_subsp._pneumoniae_1084 1 1
Klebsiella_pneumoniae_subsp._pneumoniae_HS11286 1 1
Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578 1 1
Klebsiella_pneumoniae_subsp._rhinoscleromatis_SB3432 1 1
Enterobacter_aerogenes_EA1509E 1 1
Escherichia_coli_E24377A 1 1
Escherichia_coli_LY180 1 1
Escherichia_coli_APEC_O78 1 1
Escherichia_coli_O104:H4_str._2009EL-2050 1 1
Escherichia_coli_O104:H4_str._2009EL-2071 1 1
Escherichia_coli_O104:H4_str._2011C-3493 1 1
Escherichia_coli_P12b 1 1
Escherichia_coli_UMNK88 1 1
Escherichia_coli_KO11FL 1 1
Escherichia_coli_KO11FL 1 1
Escherichia_coli_55989 1 1
Escherichia_coli_IAI1 1 1
Escherichia_coli_W 1 1
Escherichia_coli_W 1 1
Escherichia_coli_DH1 1 1
Escherichia_coli_DH1 1 1
Escherichia_coli_ATCC_8739 1 1
Escherichia_coli_SE11 1 1
Escherichia_coli_O103:H2_str._12009 1 1
Escherichia_coli_HS 1 1
Escherichia_coli_ETEC_H10407 1 1
Escherichia_coli_O26:H11_str._11368 1 1
Escherichia_coli_O111:H-_str._11128 1 1
Escherichia_coli_BW2952 1 1
Escherichia_coli_str._K-12_substr._MG1655 1 1
Escherichia_coli_str._K-12_substr._W3110 1 1
Escherichia_coli_str._K-12_substr._DH10B 1 1
Escherichia_coli_B_str._REL606 1 1
Enterobacter_cloacae_SCF1 1 1
Enterobacter_cloacae_EcWSU1 1 1
Enterobacter_cloacae_subsp._cloacae_ENHKU01 1 1
Enterobacter_cloacae_subsp._cloacae_ATCC_13047 1 1
Pseudomonas_putida_ND6 1 1
Acinetobacter_genomosp._13TU__RUH2624 1 1
Acinetobacter_sp.__SH024 1 1
Acinetobacter_calcoaceticus_ruh2202 1 1
Acinetobacter_baumannii_ZW85-1 1 1
Acinetobacter_baumannii_TYTH-1 1 1
Acinetobacter_baumannii_BJAB0868 1 1
Acinetobacter_baumannii_BJAB0715 1 1
Acinetobacter_baumannii_BJAB07104 1 1
Acinetobacter_baumannii_TCDC-AB0715 1 1
Acinetobacter_baumannii_D1279779 1 1
Acinetobacter_baumannii_MDR-TJ 1 1
Acinetobacter_baumannii_1656-2 1 1
Acinetobacter_baumannii__ATCC_19606 1 1
Acinetobacter_baumannii_AB307-0294 1 1
Acinetobacter_baumannii_AYE 1 1
Acinetobacter_baumannii_MDR-ZJ06 1 1
Acinetobacter_baumannii_AB0057 1 1
Acinetobacter_baumannii_ACICU 1 1
Sulfolobus_islandicus_HVE10/4 1 1
Sulfolobus_islandicus_L.S.2.15 1 1
Sulfolobus_islandicus_L.D.8.5 1 1
Sulfolobus_solfataricus_98/2 1 1
Sulfolobus_acidocaldarius_SUSAZ 1 1
Sulfolobus_acidocaldarius_Ron12/I 1 1
Sulfolobus_acidocaldarius_N8 1 1
Natronococcus_occultus_SP4 3 3
Natronomonas_moolapensis_8.8.11 1 1

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Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   3 3
Pan_troglodytes_69_2.1.4   (Chimpanzee)   4 4
Gorilla_gorilla_69_3.1   (Western gorilla)   3 3
Pongo_abelii_69_2   (Sumatran orangutan)   4 4
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   3 2
Macaca_mulatta_69_1   (Rhesus monkey)   3 3
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   2 2
Otolemur_garnettii_69_3   (Small-eared galago)   4 4
Microcebus_murinus_69_1   (Gray mouse lemur)   2 2
Rattus_norvegicus_69_3.4   (Norway rat)   5 5
Mus_musculus_69_38   (House mouse)   6 6
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   3 3
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   4 4
Cavia_porcellus_69_3   (Domestic guinea pig)   2 2
Oryctolagus_cuniculus_69_2   (Rabbit)   4 4
Ochotona_princeps_69   (American pika)   3 3
Tupaia_belangeri_69   (Northern tree shrew)   5 4
Sus_scrofa_69_10.2   (Pig)   3 3
Bos_taurus_69_3.1   (Cattle)   6 6
Tursiops_truncatus_69_1   (Bottlenose dolphin)   4 3
Mustela_putorius_furo_69_1.0   (Domestic ferret)   4 4
Ailuropoda_melanoleuca_69_1   (Giant panda)   4 4
Canis_familiaris_69_3.1   (Dog)   4 4
Felis_catus_69   (Domestic cat)   3 3
Equus_caballus_69_2   (Horse)   4 4
Myotis_lucifugus_69_2.0   (Little brown bat)   8 8
Pteropus_vampyrus_69_1   (Large flying fox)   5 3
Sorex_araneus_69_1   (European shrew)   3 3
Erinaceus_europaeus_69   (Western European hedgehog)   2 2
Procavia_capensis_69_1   (Cape rock hyrax)   4 3
Loxodonta_africana_69_3   (African savanna elephant)   3 3
Echinops_telfairi_69   (Small Madagascar hedgehog)   4 3
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   1 1
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   1 1
Macropus_eugenii_69_1.0   (Tammar wallaby)   3 3
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   2 2
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   2 2
Ornithorhynchus_anatinus_69_5   (Platypus)   4 3
Petromyzon_marinus_69_7.0   (Sea lamprey)   2 2
Meleagris_gallopavo_69_2   (Turkey)   2 2
Gallus_gallus_69_2   (Chicken)   1 1
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   1 1
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   1 1
Anolis_carolinensis_69_2.0   (Green anole)   4 4
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   3 3
Latimeria_chalumnae_69_1   (Coelacanth)   3 3
Gadus_morhua_69_1   (Atlantic cod)   2 2
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   3 3
Takifugu_rubripes_69_4   (Torafugu)   2 2
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   2 2
Oryzias_latipes_69_1   (Japanese medaka)   2 2
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   2 2
Oreochromis_niloticus_69_1.0   (Nile tilapia)   2 2
Danio_rerio_69_9   (Zebrafish)   2 2
Arabidopsis_thaliana_10   (Thale cress)   10 10

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   12 12
Homo_sapiens__(NCBI_version)   (Human)   4 4
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   6 6
Moniliophthora_perniciosa_FA553__(Genome_survey) 5 5
Lotus_japonicus__(Early_assembly) 11 11
Malus_x_domestica_(Duplicate)   (Apple)   22 21
Ricinus_communis__(Early_assembly)   (Castor bean)   8 8
Nicotiana_benthamiana_0.4.4_(Early_draft) 17 14
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   8 8
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   8 8
Phoenix_dactylifera__(Early_draft)   (Date palm)   4 4
NCBI_plasmid_sequences_(Plasmids) 9 9
TargetDB__(Targets) 1 1
Protein_Data_Bank_(all_PDB_sequenc) 254 254
STRING_v9.0.5_(STRING) 396 394
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 617 617
PDB_chains_(SCOP_1.75)_(PDB) 20 20
Uniprot_2018_03_genome 7398 7339
NCBI_2017_08_genome 17981 17955
Protozoadb_2010_08_(Protozoadb) 7 7

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