Domain combinations for PH domain-like superfamily in groups of genomes

• All genomes
• All eukaryote genomes (domain E)
• All bacterial genomes (domain B+A)
• All eubacterial genomes (domain B)
• All archaeal genomes (domain A)

Groups of genomes may be slower than individual genomes.

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Click on a genome below to view all domain combinations containing a PH domain-like domain in that genome.

Complete genomes

Genome		Number	Proteins
Homo_sapiens_76_38	(Human)	1904	1678
Pan_troglodytes_76_2.1.4	(Chimpanzee)	462	396
Gorilla_gorilla_76_3.1	(Western gorilla)	694	590
Pongo_abelii_76_2	(Sumatran orangutan)	494	422
Nomascus_leucogenys_76_1.0	(Northern white-cheeked gibbon)	489	422
Papio_anubis_76	(Olive baboon)	553	471
Macaca_mulatta_76_1	(Rhesus monkey)	854	749
Callithrix_jacchus_76_3.2.1	(White-tufted-ear marmoset)	1161	1010
Otolemur_garnettii_76_3	(Small-eared galago)	480	412
Microcebus_murinus_76_1	(Gray mouse lemur)	374	321
Rattus_norvegicus_76_5.0	(Norway rat)	624	530
Mus_musculus_76_38	(House mouse)	1283	1147
Dipodomys_ordii_76_1	(Ord's kangaroo rat)	411	351
Ictidomys_tridecemlineatus_76_2	(Thirteen-lined ground squirrel)	458	393
Heterocephalus_glaber_v1.7-2	(Naked mole-rat)	464	393
Cavia_porcellus_76_3	(Domestic guinea pig)	467	397
Oryctolagus_cuniculus_76_2	(Rabbit)	479	409
Ochotona_princeps_76	(American pika)	391	328
Tupaia_belangeri_76	(Northern tree shrew)	334	296
Sus_scrofa_76_10.2	(Pig)	544	475
Bos_taurus_76_3.1	(Cattle)	517	447
Ovis_aries_76_3.1	(Sheep)	542	463
Vicugna_pacos_76_1	(Alpaca)	257	220
Tursiops_truncatus_76_1	(Bottlenose dolphin)	437	374
Mustela_putorius_furo_76_1.0	(Domestic ferret)	471	400
Ailuropoda_melanoleuca_76_1	(Giant panda)	539	465
Canis_familiaris_76_3.1	(Dog)	655	561
Felis_catus_76_6.2	(Domestic cat)	490	414
Equus_caballus_76_2	(Horse)	618	534
Myotis_lucifugus_76_2.0	(Little brown bat)	438	374
Pteropus_vampyrus_76_1	(Large flying fox)	447	384
Sorex_araneus_76_1	(European shrew)	271	239
Erinaceus_europaeus_76	(Western European hedgehog)	330	286
Procavia_capensis_76_1	(Cape rock hyrax)	391	333
Loxodonta_africana_76_3	(African savanna elephant)	694	595
Echinops_telfairi_76	(Small Madagascar hedgehog)	361	313
Dasypus_novemcinctus_76_2	(Nine-banded armadillo)	637	554
Choloepus_hoffmanni_76_1	(Hoffmann's two-fingered sloth)	240	208
Macropus_eugenii_76_1.0	(Tammar wallaby)	409	342
Sarcophilus_harrisii_76_7.0	(Tasmanian devil)	551	470
Monodelphis_domestica_76_5	(Gray short-tailed opossum)	478	409
Ornithorhynchus_anatinus_76_5	(Platypus)	438	385
Saccoglossus_kowalevskii_v3.0		456	384
Petromyzon_marinus_76_7.0	(Sea lamprey)	248	214
Meleagris_gallopavo_76_2	(Turkey)	451	390
Gallus_gallus_76_4	(Chicken)	470	397
Anas_platyrhynchos_76_1.0	(Mallard)	439	373
Taeniopygia_guttata_76_3.2.4	(Zebra finch)	446	377
Ficedula_albicollis_76_1.0	(Collared flycatcher)	453	378
Pelodiscus_sinensis_76_1.0	(Chinese soft-shelled turtle)	529	450
Anolis_carolinensis_76_2.0	(Green anole)	451	383
Xenopus_laevis_	(African clawed frog)	537	475
Xenopus_tropicalis_76_4.2	(Tropical clawed frog)	550	475
Latimeria_chalumnae_76_1	(Coelacanth)	572	497
Lepisosteus_oculatus_76	(Spotted gar)	702	580
Gadus_morhua_76_1	(Atlantic cod)	621	540
Tetraodon_nigroviridis_76_8	(Spotted green pufferfish)	854	734
Takifugu_rubripes_76_4	(Torafugu)	2160	1857
Gasterosteus_aculeatus_76_1	(Three-spined stickleback)	701	609
Oryzias_latipes_76_1	(Japanese medaka)	689	593
Xiphophorus_maculatus_76_4.4.2	(Southern platyfish)	641	540
Poecilia_formosa_76	(Amazon molly)	672	568
Oreochromis_niloticus_76_1.0	(Nile tilapia)	888	742
Astyanax_mexicanus_76	(Mexican tetra)	661	563
Danio_rerio_76_9	(Zebrafish)	1078	931
Oikopleura_dioica		110	102
Ciona_savignyi_76_2.0	(Pacific transparent sea squirt)	384	342
Ciona_intestinalis_76	(Vase tunicate)	184	158
Strongylocentrotus_purpuratus_v3.1	(Purple sea urchin)	291	249
Adineta_vaga		388	358
Octopus_bimaculoides_280		337	315
Crassostrea_gigas_22	(Pacific oyster)	227	201
Lottia_gigantea_	(Owl limpet)	205	181
Helobdella_robusta_		252	236
Capitella_sp._I_		232	200
Danaus_plexippus_OGS1.0	(Monarch butterfly)	186	167
Heliconius_melpomene_	(Postman butterfly)	142	131
Bombyx_mori_	(Domestic silkworm)	136	129
Nasonia_vitripennis_	(Jewel wasp)	133	116
Apis_mellifera_38.2d_(Not_maintained)	(Honey bee)	334	291
Harpegnathos_saltator_v3.3	(Jerdon's jumping ant)	176	156
Linepithema_humile_v1.1	(Argentine ant)	175	156
Pogonomyrmex_barbatus_v1.2	(Red harvester ant)	180	160
Solenopsis_invicta_v.2.2.3	(Red fire ant)	145	130
Acromyrmex_echinatior_v3.8	(Panamanian leafcutter ant)	169	151
Atta_cephalotes_v1.1		173	152
Camponotus_floridanus_v3.3	(Florida carpenter ant)	176	157
Lucilia_cuprina	(Australian sheep blowfly)	151	134
Drosophila_grimshawi_1.3		172	153
Drosophila_willistoni_1.3		167	149
Drosophila_pseudoobscura_2.13		163	146
Drosophila_persimilis_1.3		168	152
Drosophila_suzukii		174	153
Drosophila_yakuba_1.3		166	151
Drosophila_simulans_1.3		146	130
Drosophila_sechellia_1.3		167	152
Drosophila_melanogaster_76_5	(Fruit fly)	595	530
Drosophila_erecta_1.3		163	146
Drosophila_ananassae_1.3		160	144
Drosophila_virilis_1.2		165	150
Drosophila_mojavensis_1.3		167	149
Megaselia_scalaris_22		62	58
Aedes_aegypti_55_(Not_maintained)	(Yellow fever mosquito)	182	166
Culex_pipiens_quinquefasciatus_	(Southern house mosquito)	173	160
Anopheles_darlingi_22	(American malaria mosquito)	129	113
Anopheles_gambiae_49_3j	(African malaria mosquito)	168	147
Tribolium_castaneum_3.0	(Red flour beetle)	182	162
Pediculus_humanus_corporis__(Early_assembly)	(Human body louse)	164	147
Acyrthosiphon_pisum_	(Pea aphid)	141	127
Rhodnius_prolixus_22		154	139
Daphnia_pulex_	(Common water flea)	187	169
Strigamia_maritima_22		196	171
Sarcoptes_scabiei		125	113
Tetranychus_urticae_	(Two-spotted spider mite)	141	124
Ixodes_scapularis__(Preliminary)	(Black-legged tick)	152	137
Pristionchus_pacificus_		112	106
Meloidogyne_incognita_	(Southern root-knot nematode)	116	110
Meloidogyne_hapla_		68	67
Onchocerca_volvulus_22		145	135
Brugia_malayi_WS250	(Agent of lymphatic filariasis)	212	193
Caenorhabditis_japonica_		116	109
Caenorhabditis_brenneri_		175	165
Caenorhabditis_remanei_		144	135
Caenorhabditis_elegans_76_235	(Roundworm)	327	304
Caenorhabditis_briggsae_2		138	129
Trichinella_spiralis_22		137	130
Hymenolepis_microstoma_		128	113
Echinococcus_multilocularis_		137	124
Echinococcus_granulosus_		137	125
Taenia_solium_	(Pork tapeworm)	127	117
Schistosoma_mansoni_		137	128
Mnemiopsis_leidyi	(Sea walnut)	128	118
Thelohanellus_kitauei		31	31
Acropora_digitifera_v1.0		213	191
Nematostella_vectensis_1.0	(Starlet sea anemone)	229	201
Hydra_vulgaris		192	166
Amphimedon_queenslandica		304	262
Trichoplax_adhaerens_		149	129
Proterospongia_sp._ATCC_50818_		318	266
Monosiga_brevicollis_		189	163
Sphaeroforma_arctica_JP610_		79	66
Capsaspora_owczarzaki_ATCC_30864_		213	176
Conidiobolus_coronatus_NRRL28638_v1.0		53	51
Mortierella_verticillata_NRRL_6337_		80	75
Phycomyces_blakesleeanus_		110	108
Rhizopus_oryzae_RA_99-880_		107	105
Mucor_circinelloides_		101	98
Rhizomucor_miehei_CAU432_		90	88
Malassezia_globosa_CBS_7966_		58	56
Sporisorium_reilianum_22		42	40
Ustilago_maydis_		42	41
Mixia_osmundae_IAM_14324_v1.0		40	39
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0		41	39
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_		39	38
Melampsora_laricis-populina_		36	35
Rhodotorula_graminis_WP1_v1.0		35	34
Sporobolomyces_roseus_IAM_13481_		28	26
Microbotryum_violaceum_22		50	48
Wallemia_sebi_v1.0		41	40
Sphaerobolus_stellatus_v1.0		53	51
Piloderma_croceum_F_1598_v1.0		52	51
Serpula_lacrymans_var._lacrymans_S7.9_		34	32
Coniophora_puteana		45	44
Hydnomerulius_pinastri_v2.0		50	48
Paxillus_rubicundulus_Ve08.2h10_v1.0		50	48
Pisolithus_microcarpus_441_v1.0		48	47
Pisolithus_tinctorius_Marx_270_v1.0		51	49
Scleroderma_citrinum_Foug_A_v1.0		52	50
Coprinopsis_cinerea_okayama7_130_v3		55	52
Pleurotus_ostreatus_	(Oyster mushroom)	48	47
Amanita_thiersii_Skay4041_v1.0		49	48
Amanita_muscaria_Koide_v1.0	(Fly agaric)	55	53
Galerina_marginata_v1.0		61	58
Hebeloma_cylindrosporum_h7_v2.0		58	55
Laccaria_bicolor_S238N-H82_		58	55
Agaricus_bisporus_var._bisporus_		50	48
Schizophyllum_commune_		50	48
Stereum_hirsutum_FP-91666_SS1__v1.0		47	46
Heterobasidion_annosum_		44	43
Gloeophyllum_trabeumv1.0		46	45
Punctularia_strigosozonata_v1.0		43	42
Sebacina_vermifera_MAFF_305830_v1.0		67	65
Fomitiporia_mediterranea_v1.0		46	44
Tulasnella_calospora_AL13/4D_v1.0		47	45
Postia_placenta_		66	65
Wolfiporia_cocos_MD-104_SS10__v1.0		53	50
Fomitopsis_pinicolav1.0		50	48
Fomitopsis_pinicola_FP-58527_SS1_v3.0		50	48
Phanerochaete_chrysosporium_RP-78_2.1		42	41
Dichomitus_squalens		47	45
Trametes_versicolor_v1.0		48	46
Tremella_mesenterica_	(Witches' butter)	42	41
Daldinia_eschscholzii_EC12_v1.0		40	38
Apiospora_montagnei_NRRL_25634_v1.0		41	40
Magnaporthe_poae_ATCC_64411_22		31	30
Magnaporthe_grisea_70-15_		38	36
Podospora_anserina_		36	34
Sporotrichum_thermophile_ATCC_42464_		36	34
Thielavia_terrestris_NRRL_8126_		37	35
Chaetomium_globosum_CBS_148.51_		35	33
Neurospora_tetrasperma_		40	38
Neurospora_discreta_FGSC_8579_		39	37
Neurospora_crassa_OR74A_		40	38
Cryphonectria_parasitica_	(Chestnut blight fungus)	38	36
Verticillium_albo-atrum_VaMs.102_		36	35
Verticillium_dahliae_VdLs.17_		34	33
Acremonium_alcalophilumv_1.0		38	36
Glomerella_graminicola_22		42	40
Fusarium_graminearum_		38	38
Nectria_haematococca_mpVI_		37	36
Fusarium_oxysporum_f._sp._lycopersici_4286_		43	43
Fusarium_verticillioides_7600_		36	35
Trichoderma_asperellum_CBS_433.97_v1.0		38	37
Trichoderma_atroviride_		38	37
Trichoderma_citrinoviride_v1.0		41	39
Trichoderma_reesei_1.2		40	39
Trichoderma_virens_Gv29-8_		37	36
Trichoderma_longibrachiatum_ATCC_18648_v1.0		35	35
Trichoderma_harzianum_CBS_226.95_v1.0		40	39
Amorphotheca_resinae_v1.0	(Creosote fungus)	38	37
Botrytis_cinerea_B05.10_		38	36
Sclerotinia_sclerotiorum_		42	40
Blumeria_graminis_22		36	34
Didymella_exigua_CBS_183.55_v1.0		42	41
Leptosphaeria_maculans_22		43	41
Setosphaeria_turcica_v1.0		46	44
Cochliobolus_miyabeanus_ATCC_44560_v1.0		45	43
Cochliobolus_victoriae_FI3_v1.0		43	41
Cochliobolus_carbonum_26-R-13_v1.0		44	42
Cochliobolus_heterostrophus_	(Southern corn leaf blight pathogen)	41	39
Alternaria_brassicicola_		37	37
Cochliobolus_lunatus_m118_v2.0		45	43
Pyrenophora_teres_f._teres_22		46	43
Pyrenophora_tritici-repentis_		43	41
Stagonospora_nodorum_		46	44
Mycosphaerella_graminicola_IPO323_		38	37
Zasmidium_cellare_ATCC_36951_v1.0		44	41
Dothistroma_septosporum		41	39
Septoria_musiva_v1.0		42	40
Mycosphaerella_fijiensis_CIRAD86_		35	34
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0		44	43
Paracoccidioides_brasiliensis_Pb18_		37	36
Coccidioides_posadasii_RMSCC_3488_		39	39
Coccidioides_immitis_RS_		39	39
Ajellomyces_dermatitidis_SLH14081_		43	42
Histoplasma_capsulatum_class_NAmI_strain_WU24_		38	37
Microsporum_canis_CBS_113480_		35	34
Trichophyton_equinum_CBS_127.97_		37	35
Trichophyton_verrucosum_HKI_0517_		39	38
Arthroderma_benhamiae_CBS_112371_		38	37
Trichophyton_tonsurans_CBS_112818_		36	34
Trichophyton_rubrum_CBS_118892_		36	35
Uncinocarpus_reesii_1704_		33	33
Aspergillus_zonatus_v1.0		38	37
Penicillium_chrysogenum_Wisconsin_54-1255_		41	40
Penicillium_chrysogenum_v1.0		39	38
Aspergillus_acidus_v1.0		41	39
Aspergillus_fumigatus_Af293		39	37
Aspergillus_brasiliensis_v1.0		40	38
Aspergillus_nidulans_FGSC_A4_		42	40
Aspergillus_sydowii_v1.0		39	37
Aspergillus_versicolor_v1.0		40	39
Aspergillus_glaucus		42	39
Aspergillus_carbonarius_ITEM_5010_		39	37
Neosartorya_fischeri_NRRL_181_		38	37
Aspergillus_terreus_NIH2624_		36	35
Aspergillus_tubingensis_v1.0		40	38
Aspergillus_wentii_v1.0		37	35
Aspergillus_oryzae_RIB40_		34	33
Aspergillus_niger_22		40	38
Aspergillus_niger_ATCC_1015_		28	27
Aspergillus_flavus_NRRL3357_		38	37
Aspergillus_clavatus_NRRL_1_		39	38
Penicillium_marneffei_ATCC_18224_		43	41
Tuber_melanosporum_Mel28_22		45	43
Tuber_melanosporum_Vittad_	(Perigord truffle)	45	43
Hansenula_polymorpha_v2.0		31	31
Dekkera_bruxellensis_CBS_2499_v2.0		27	27
Pichia_membranifaciensv1.0		31	30
Candida_tanzawaensis_NRRL_Y-17324__v1.0		34	32
Candida_dubliniensis_CD36_		33	30
Candida_tropicalis_MYA-3404_		35	32
Candida_parapsilosis_		30	30
Candida_albicans_SC5314		35	33
Lodderomyces_elongisporus_NRRL_YB-4239_		27	27
Babjeviella_inositovora_NRRL_Y-12698_v1.0		33	33
Pichia_stipitis_CBS_6054_		32	30
Candida_guilliermondii_ATCC_6260_		32	32
Hyphopichia_burtonii_NRRL_Y-1933_v1.0		36	34
Debaromyces_hansenii		35	33
Wickerhamomyces_anomalus		37	36
Pichia_pastoris_GS115_		30	29
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1		22	22
Yarrowia_lipolytica_CLIB122		40	39
Candida_lusitaniae_ATCC_42720_		35	34
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0		29	28
Vanderwaltozyma_polyspora_DSM_70294_		35	34
Candida_glabrata_CBS138		38	37
Kluyveromyces_thermotolerans_CBS_6340		34	33
Lachancea_kluyveri_		33	32
Kluyveromyces_waltii		31	30
Ashbya_gossypii_ATCC_10895_		34	33
Zygosaccharomyces_rouxii_		32	31
Saccharomyces_mikatae_MIT		38	37
Saccharomyces_paradoxus_MIT		41	40
Saccharomyces_cerevisiae_76	(Baker's yeast)	41	40
Saccharomyces_bayanus_MIT		39	38
Kluyveromyces_lactis		31	30
Schizosaccharomyces_cryophilus_OY26_22		36	34
Schizosaccharomyces_octosporus_yFS286_		35	33
Schizosaccharomyces_japonicus_yFS275_		32	31
Schizosaccharomyces_pombe	(Fission yeast)	37	35
Catenaria_anguillulae_PL171_v1.0		70	68
Allomyces_macrogynus_ATCC_38327_		117	115
Spizellomyces_punctatus_DAOM_BR117_		82	77
Dictyostelium_discoideum		156	140
Dictyostelium_purpureum_		158	140
Entamoeba_dispar_1.2		121	112
Entamoeba_invadens_1.2		131	121
Entamoeba_histolytica_1		118	107
Selaginella_moellendorffii_		69	69
Pinus_taeda	(Loblolly pine)	23	22
Picea_abies	(Norway spruce)	17	17
Eucalyptus_grandis_v201	(Rose gum)	78	78
Theobroma_cacao_B97-61/B2_v1	(Cacao)	50	50
Gossypium_raimondii_v221		289	289
Citrus_clementina_v165		77	77
Citrus_sinensis_v154	(Sweet orange)	129	129
Thellungiella_halophila_v173		77	77
Brassica_rapa_Chiifu-401_1.2	(Field mustard)	92	92
Capsella_rubella_v183		71	71
Arabidopsis_lyrata_	(Lyrate rockcress)	67	67
Arabidopsis_thaliana_10	(Thale cress)	86	86
Carica_papaya_	(Papaya)	41	41
Medicago_truncatula_	(Barrel medic)	90	90
Phaseolus_vulgaris_v186	(French bean)	71	71
Glycine_max_v109	(Soybean)	123	123
Cucumis_sativus_v122	(Cucumber)	66	66
Fragaria_vesca_	(Wild strawberry)	51	51
Malus_domestica_v196	(Apple)	97	97
Prunus_persica_v139	(Peach)	49	49
Linum_usitatissimum_v200	(Flax)	94	94
Manihot_esculenta_v147	(Cassava)	84	84
Populus_trichocarpa_v156	(Black cottonwood)	96	96
Vitis_vinifera_	(Wine grape)	52	52
Mimulus_guttatus_v140	(Spotted monkey flower)	56	56
Solanum_lycopersicum_v.2.3	(Tomato)	66	66
Solanum_tuberosum_	(Potato)	68	68
Actinidia_chinensis_Hongyang_		67	66
Aquilegia_coerulea_v195		98	98
Triticum_urartu_22		46	46
Triticum_aestivum_22	(Bread wheat)	147	147
Aegilops_tauschii_22		52	49
Brachypodium_distachyon_	(Stiff brome)	84	84
Oryza_barthii_22	(African wild rice)	83	81
Oryza_meridionalis_22		103	103
Oryza_glumaepatula_22		116	116
Oryza_glaberrima	(African rice)	46	46
Oryza_punctata_22		107	107
Oryza_nivara_22		112	112
Oryza_brachyantha_22	(Malo sina)	55	55
Oryza_sativa_ssp._japonica_5.0	(Japanese rice)	75	75
Oryza_sativa_v193	(Rice)	73	73
Phyllostachys_heterocyclavar._pubescens	(Kikko-chiku)	80	76
Panicum_virgatum_v202	(Switchgrass)	117	117
Setaria_italica_v164	(Foxtail millet)	71	71
Zea_mays_subsp._mays_	(Maize)	105	105
Zea_mays_v181	(Maize)	121	121
Sorghum_bicolor_	(Sorghum)	59	58
Musa_balbisiana	(Balbis banana)	71	70
Musa_acuminata_22	(Wild Malaysian banana)	82	82
Amborella_trichopoda_22		38	38
Physcomitrella_patens		69	69
Coccomyxa_subellipsoidea_sp._C-169_v2		17	17
Asterochloris_sp._Cgr/DA1pho_v1.0		20	20
Chlorella_variabilis_sp._NC64A_		19	19
Chlorella_vulgaris_		19	19
Volvox_carteri_f._nagariensis_		17	17
Volvox_carteri_v199		17	17
Chlamydomonas_reinhardtii_4.0		18	17
Ostreococcus_sp._RCC809_		13	13
Ostreococcus_lucimarinus_CCE9901_		16	16
Ostreococcus_tauri_		13	13
Bathycoccus_prasinos_		14	14
Micromonas_sp._RCC299_		23	23
Micromonas_pusilla_CCMP1545_v3.0		22	21
Cyanidioschyzon_merolae_strain_10D_22		9	9
Cyanidioschyzon_merolae		9	9
Porphyridium_purpureum_02_2012		37	37
Thecamonas_trahens_ATCC_50062_		220	175
Bigelowiella_natans_CCMP2755_22		198	179
Giardia_lamblia_2.3		5	5
Cyanophora_paradoxa_		28	28
Leishmania_mexicana_2.4		24	23
Leishmania_major_strain_Friedlin_		24	23
Leishmania_infantum_JPCM5_2.4		23	22
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4		24	23
Trypanosoma_vivax_		19	18
Trypanosoma_cruzi_strain_CL_Brener		33	32
Trypanosoma_congolense_2.4		23	23
Trypanosoma_brucei_gambiense_v4.1		21	20
Trypanosoma_brucei_TREU927_v4.1		22	21
Ectocarpus_siliculosus		85	83
Aureococcus_anophagefferens_		68	57
Albugo_laibachii_22		219	178
Pythium_iwayamai_DAOM_BR242034_22		209	173
Pythium_arrhenomanes_ATCC_12531_22		180	151
Pythium_ultimum_v1.7-2		232	182
Pythium_aphanidermatum_DAOM_BR444_22		198	167
Pythium_irregulare_DAOM_BR486_22		244	200
Pythium_vexans_DAOM_BR484_22		201	166
Phytophthora_ramorum_1.1	(Sudden oak death agent)	215	167
Phytophthora_sojae_1.1		219	171
Phytophthora_infestans_T30-4_		236	193
Phytophthora_capsici_		148	125
Hyaloperonospora_arabidopsidis_22		150	120
Phaeodactylum_tricornutumCCAP_1055/1		26	24
Fragilariopsis_cylindrus		55	51
Thalassiosira_pseudonana_CCMP1335		32	29
Perkinsus_marinus_ATCC_50983_		20	20
Paramecium_tetraurelia_		187	177
Tetrahymena_thermophila_SB210_1_		79	71
Ichthyophthirius_multifiliis_strain_G5_		23	22
Cryptosporidium_hominis		16	16
Cryptosporidium_muris		22	22
Cryptosporidium_parvum_Iowa_II		20	20
Neospora_caninum		20	20
Toxoplasma_gondii_VEG		21	21
Toxoplasma_gondii_ME49		23	23
Toxoplasma_gondii_GT1		19	19
Babesia_bovis_T2Bo_		26	26
Theileria_parva__		10	10
Theileria_annulata		13	13
Plasmodium_falciparum_3D7_		19	19
Plasmodium_vivax_SaI-1_7.0		15	15
Plasmodium_knowlesi_strain_H_		16	16
Plasmodium_yoelii_ssp._yoelii_1_		15	15
Plasmodium_chabaudi_		17	17
Plasmodium_berghei_ANKA_		14	14
Symbiodinium_minutum_clade_B1_v1.2		70	65
Naegleria_gruberi_		80	74
Trichomonas_vaginalis_		181	180
Guillardia_theta_CCMP2712_v1.0_		154	145
Emiliania_huxleyi_CCMP1516_		102	95
Thermobaculum_terrenum_ATCC_BAA-798		1	1
Synechococcus_elongatus_PCC_7942		1	1
Rivularia_sp._PCC_7116		1	1
Slackia_heliotrinireducens_DSM_20476		1	1
Geodermatophilus_obscurus_DSM_43160		1	1
Stackebrandtia_nassauensis_DSM_44728		1	1
Streptosporangium_roseum_DSM_43021		1	1
Streptomyces_coelicolor_A3(2)		1	1
Streptomyces_sp._PAMC26508		1	1
Streptomyces_flavogriseus_ATCC_33331		1	1
Streptomyces_griseus_subsp._griseus_NBRC_13350		1	1
Streptomyces_scabiei_87.22		1	1
Actinosynnema_mirum_DSM_43827		1	1
Saccharomonospora_viridis_DSM_43017		1	1
Saccharopolyspora_erythraea_NRRL_2338		1	1
Microlunatus_phosphovorus_NM-1		1	1
Salinispora_arenicola_CNS-205		1	1
Salinispora_tropica_CNB-440		1	1
Verrucosispora_maris_AB-18-032		1	1
Micromonospora_sp._L5		1	1
Micromonospora_aurantiaca_ATCC_27029		1	1
Actinoplanes_sp._N902-109		1	1
Actinoplanes_sp._SE50/110		1	1
Actinoplanes_missouriensis_431		2	2
Rhodococcus_jostii_RHA1		2	2
Rhodococcus_opacus_B4		2	2
Nocardia_cyriacigeorgica_GUH-2		1	1
Nocardia_farcinica_IFM_10152		1	1
Corynebacterium_resistens_DSM_45100		1	1
Corynebacterium_jeikeium_K411		1	1
Corynebacterium_glutamicum_R		1	1
Corynebacterium_diphtheriae_NCTC_13129		1	1
Kytococcus_sedentarius_DSM_20547		1	1
Jonesia_denitrificans_DSM_20603		1	1
Intrasporangium_calvum_DSM_43043		1	1
Cellulomonas_fimi_ATCC_484		1	1
Arthrobacter_arilaitensis_Re117		1	1
Kocuria_rhizophila_DC2201		1	1
Arthrobacter_sp._Rue61a		1	1
Arthrobacter_sp._FB24		1	1
Mobiluncus_curtisii_ATCC_43063		1	1
Dehalococcoides_ethenogenes_195		1	1
Dehalococcoides_sp._BAV1		1	1
Herpetosiphon_aurantiacus_DSM_785		1	1
Roseiflexus_sp._RS-1		1	1
Roseiflexus_castenholzii_DSM_13941		1	1
Anaerococcus_prevotii_DSM_20548		1	1
Megamonas_hypermegale		1	1
Selenomonas_ruminantium_subsp._lactilytica_TAM6421		1	1
Clostridium_clariflavum_DSM_19732		2	2
Clostridium_cellulolyticum_H10		1	1
Faecalibacterium_prausnitzii		1	1
Thermaerobacter_marianensis_DSM_12885		1	1
Desulfitobacterium_hafniense_Y51		1	1
Desulfitobacterium_dehalogenans_ATCC_51507		1	1
Acetobacterium_woodii_DSM_1030		2	2
Clostridium_saccharolyticum_WM1		1	1
Clostridium_lentocellum_DSM_5427		2	2
Candidatus_Arthromitus_sp._SFB-mouse-Japan		1	1
Clostridium_sp._BNL1100		1	1
Clostridium_kluyveri_DSM_555		1	1
Clostridium_tetani_E88		1	1
Clostridium_cellulovorans_743B		3	3
Clostridium_botulinum_A_str._ATCC_3502		1	1
Thermosediminibacter_oceani_DSM_16646		1	1
Acetohalobium_arabaticum_DSM_5501		1	1
Halanaerobium_praevalens_DSM_2228		1	1
Carnobacterium_sp._17-4		2	2
Carnobacterium_sp._WN1359		2	2
Aerococcus_urinae_ACS-120-V-Col10a		1	1
Enterococcus_sp._7L76		1	1
Weissella_koreensis_KACC_15510		1	1
Lactococcus_lactis_subsp._cremoris_MG1363		1	1
Streptococcus_sp._I-P16		1	1
Streptococcus_sp._I-G2		1	1
Streptococcus_dysgalactiae_subsp._equisimilis_GGS_124		1	1
Streptococcus_uberis_0140J		1	1
Streptococcus_parasanguinis_ATCC_15912		1	1
Streptococcus_agalactiae_A909		1	1
Streptococcus_thermophilus_LMD-9		1	1
Streptococcus_suis_P1/7		1	1
Streptococcus_sanguinis_SK36		1	1
Streptococcus_salivarius_57.I		1	1
Streptococcus_oralis_Uo5		1	1
Streptococcus_gordonii_str._Challis_substr._CH1		1	1
Exiguobacterium_sp._MH3		1	1
Exiguobacterium_sp._AT1b		2	2
Exiguobacterium_sibiricum_255-15		2	2
Brevibacillus_brevis_NBRC_100599		2	2
Paenibacillus_sp._JDR-2		1	1
Paenibacillus_mucilaginosus_3016		2	2
Listeria_innocua_Clip11262		1	1
Listeria_monocytogenes_serotype_4b_str._CLIP_80459		1	1
Listeria_ivanovii_subsp._ivanovii_PAM_55		1	1
Solibacillus_silvestris_StLB046		2	2
Lysinibacillus_sphaericus_C3-41		2	2
Oceanobacillus_iheyensis_HTE831		1	1
Geobacillus_thermoleovorans_CCB_US3_UF5		1	1
Geobacillus_kaustophilus_HTA426		1	1
Geobacillus_sp._GHH01		1	1
Geobacillus_sp._WCH70		1	1
Geobacillus_thermodenitrificans_NG80-2		1	1
Halobacillus_halophilus_DSM_2266		2	2
Bacillus_sp._JS		2	2
Bacillus_sp._1NLA3E		1	1
Bacillus_amyloliquefaciens_FZB42		2	2
Bacillus_atrophaeus_1942		2	2
Bacillus_subtilis_subsp._subtilis_str._168		3	3
Bacillus_licheniformis_DSM_13_=_ATCC_14580		1	1
Bacillus_halodurans_C-125		1	1
Bacillus_weihenstephanensis_KBAB4		2	2
Bacillus_thuringiensis_str._Al_Hakam		2	2
Bacillus_cereus_03BB102		2	2
Bacillus_anthracis_str._A0248		2	2
Bacillus_pseudofirmus_OF4		1	1
Bacillus_pumilus_SAFR-032		1	1
Bacillus_megaterium_DSM_319		2	2
Chitinophaga_pinensis_DSM_2588		1	1
Flexibacter_litoralis_DSM_6794		1	1
Cyclobacterium_marinum_DSM_745		1	1
Marivirga_tractuosa_DSM_4126		1	1
Owenweeksia_hongkongensis_DSM_17368		1	1
Zunongwangia_profunda_SM-A87		1	1
Gramella_forsetii_KT0803		1	1
Aequorivita_sublithincola_DSM_14238		1	1
Cellulophaga_algicola_DSM_14237		1	1
Cellulophaga_lytica_DSM_7489		1	1
Polaribacter_sp._MED152		1	1
Weeksella_virosa_DSM_16922		1	1
Flavobacterium_psychrophilum_JIP02/86		1	1
Flavobacterium_branchiophilum_FL-15		1	1
Flavobacterium_johnsoniae_UW101		1	1
Sebaldella_termitidis_ATCC_33386		1	1
Syntrophus_aciditrophicus_SB		1	1
Desulfotalea_psychrophila_LSv54		1	1
Desulfovibrio_piezophilus		1	1
Desulfovibrio_salexigens_DSM_2638		1	1
Pelobacter_propionicus_DSM_2379		1	1
Ramlibacter_tataouinensis_TTB310		1	1
Polaromonas_naphthalenivorans_CJ2		1	1
Sphingopyxis_alaskensis_RB2256		1	1
Methylobacterium_chloromethanicum_CM4		1	1
Methylobacterium_extorquens_AM1		1	1
Methylobacterium_sp._4-46		1	1
Methylobacterium_populi_BJ001		1	1
Methylobacterium_nodulans_ORS_2060		1	1
Methylobacterium_radiotolerans_JCM_2831		1	1
Mesorhizobium_sp._BNC1		1	1
Vibrio_sp._Ex25		1	1
Vibrio_harveyi_ATCC_BAA-1116		1	1
Vibrio_parahaemolyticus_RIMD_2210633		1	1
Photobacterium_profundum_SS9		1	1
Ferrimonas_balearica_DSM_9799		1	1
Shewanella_piezotolerans_WP3		1	1
Shewanella_loihica_PV-4		1	1
Shewanella_halifaxensis_HAW-EB4		1	1
Shewanella_sediminis_HAW-EB3		1	1
Shewanella_pealeana_ATCC_700345		1	1
Shewanella_oneidensis_MR-1		1	1
Shewanella_baltica_OS185		1	1
Shewanella_woodyi_ATCC_51908		1	1
Shewanella_sp._MR-4		1	1
Shewanella_amazonensis_SB2B		1	1
Shewanella_violacea_DSS12		1	1
Pseudoalteromonas_sp._SM9913		1	1
Pseudoalteromonas_atlantica_T6c		1	1
Pseudoalteromonas_haloplanktis_TAC125		1	1
Glaciecola_sp._4H-3-7+YE-5		1	1
Glaciecola_nitratireducens_FR1064		1	1
Alteromonas_sp._SN2		1	1
Alteromonas_macleodii_str._'Deep_ecotype'		1	1
Pseudomonas_sp._TKP		1	1
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421		1	1
Pseudomonas_fluorescens_SBW25		1	1
Pseudomonas_mendocina_ymp		1	1
Hyperthermus_butylicus_DSM_5456		1	1
Methanohalobium_evestigatum_Z-7303		1	1
Methanohalophilus_mahii_DSM_5219		1	1
Pyrococcus_yayanosii_CH1		1	1
Methanobrevibacter_sp._AbM4		1	1
Methanobrevibacter_smithii_ATCC_35061		1	1

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Strains

Genome		Number	Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)	(Tropical clawed frog)	715	632
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)	(Fruit fly)	449	411
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)	(African malaria mosquito)	197	172
Ascaris_suum_Victoria/Ghent_	(Pig roundworm)	148	136
Caenorhabditis_elegans_WormBase_WS218__(WormBase)	(Roundworm)	248	231
Cryptococcus_neoformans_var._grubii_H99_		43	41
Cryptococcus_neoformans_B-3501A_		45	44
Cryptococcus_neoformans_JEC21_		43	42
Paracoccidioides_brasiliensis_Pb01_		41	40
Paracoccidioides_brasiliensis_Pb03_		40	39
Coccidioides_posadasii_str._Silveira_		38	38
Coccidioides_immitis_RMSCC_3703_		32	32
Coccidioides_immitis_RMSCC_2394_		37	37
Coccidioides_immitis_H538.4_		35	35
Ajellomyces_dermatitidis_ER-3_		40	39
Histoplasma_capsulatum_H143		36	35
Histoplasma_capsulatum_H88		41	40
Histoplasma_capsulatum_G186AR		41	40
Aspergillus_fumigatus_A1163_		39	37
Candida_albicans_WO-1_		35	33
Saccharomyces_cerevisiae_UC5		29	28
Saccharomyces_cerevisiae_PW5		35	34
Saccharomyces_cerevisiae_FL100		20	19
Saccharomyces_cerevisiae_CLIB382		3	3
Saccharomyces_cerevisiae_CLIB324		15	14
Saccharomyces_cerevisiae_CBS7960		30	29
Saccharomyces_cerevisiae_YJM269		30	29
Saccharomyces_cerevisiae_T7		39	38
Saccharomyces_cerevisiae_FostersB		27	26
Saccharomyces_cerevisiae_FostersO		19	19
Saccharomyces_cerevisiae_VL3		27	26
Saccharomyces_cerevisiae_Vin13		22	21
Saccharomyces_cerevisiae_LalvinQA23		20	20
Saccharomyces_cerevisiae_AWRI796		24	23
Saccharomyces_cerevisiae_Sigma1278b		38	37
Saccharomyces_cerevisiae_W303		38	37
Saccharomyces_cerevisiae_JAY291		38	37
Saccharomyces_cerevisiae_AWRI1631		27	26
Saccharomyces_cerevisiae_YPS163		6	5
Saccharomyces_cerevisiae_M22		10	9
Saccharomyces_cerevisiae_T73		11	11
Saccharomyces_cerevisiae_CLIB215		34	33
Saccharomyces_cerevisiae_Y10		7	6
Saccharomyces_cerevisiae_YJM789_		41	40
Saccharomyces_cerevisiae_YJM789		40	39
Saccharomyces_cerevisiae_RM11-1a		39	38
Saccharomyces_cerevisiae_RM11-1a_		39	38
Saccharomyces_cerevisiae_SGD_(SGD)	(Baker's yeast)	41	40
Schizosaccharomyces_pombe_972h-_		37	35
Batrachochytrium_dendrobatidis_JEL423_		48	47
Batrachochytrium_dendrobatidis_JAM81_		45	44
Theobroma_cacao_Matina_1-6_v0.9	(Cacao)	48	48
Hordeum_vulgare_22	(Domesticated barley)	106	106
Oryza_sativa_ssp._Indica_(Subspecies)	(Long-grained rice)	60	60
Trypanosoma_brucei_Lister_427_v4.1		22	21
Neospora_caninum_Nc-Liverpool_6.2		20	20
Plasmodium_falciparum_HB3_		17	17
Plasmodium_falciparum_Dd2_		13	13
Chamaesiphon_minutus_PCC_6605		1	1
Synechococcus_elongatus_PCC_6301		1	1
Cyanobacterium_aponinum_PCC_10605		1	1
Stanieria_cyanosphaera_PCC_7437		1	1
Calothrix_parietina_Calothrix_sp._PCC_6303		1	1
Anabaena_cylindrica_PCC_7122		1	1
Streptomyces_albus_J1074		1	1
Streptomyces_davawensis_JCM_4913		1	1
Streptomyces_fulvissimus_DSM_40593		1	1
Streptomyces_venezuelae_ATCC_10712		1	1
Saccharothrix_espanaensis_DSM_44229		1	1
Amycolatopsis_orientalis_HCCB10007		1	1
Actinoplanes_friuliensis_DSM_7358		1	1
Nocardia_brasiliensis_ATCC_700358		2	2
Corynebacterium_maris_DSM_45190		1	1
Corynebacterium_ulcerans_BR-AD22		1	1
Corynebacterium_ulcerans_809		1	1
Corynebacterium_callunae_DSM_20147		1	1
Corynebacterium_glutamicum_SCgG2		1	1
Corynebacterium_glutamicum_SCgG1		1	1
Corynebacterium_diphtheriae_VA01		1	1
Corynebacterium_diphtheriae_HC04		1	1
Corynebacterium_diphtheriae_HC03		1	1
Corynebacterium_diphtheriae_CDCE_8392		1	1
Clavibacter_michiganensis_subsp._sepedonicus		1	1
Dehalococcoides_mccartyi_GY50		1	1
Dehalococcoides_mccartyi_DCMB5		1	1
Dehalococcoides_mccartyi_BTF08		1	1
Dehalococcoides_sp._GT		1	1
Dehalococcoides_sp._CBDB1		1	1
Faecalibacterium_prausnitzii_L2-6		1	1
Desulfosporosinus_meridiei_DSM_13257		1	1
Desulfitobacterium_hafniense_DCB-2		1	1
Desulfotomaculum_gibsoniae_DSM_7213		1	1
Candidatus_Arthromitus_sp._SFB-rat-Yit		1	1
Candidatus_Arthromitus_sp._SFB-mouse-Yit		1	1
Clostridium_kluyveri_NBRC_12016		1	1
Clostridium_tetani_genome_12124569		1	1
Clostridium_botulinum_H04402_065		1	1
Clostridium_botulinum_F_str._230613		1	1
Clostridium_botulinum_F_str._Langeland		1	1
Clostridium_botulinum_E3_str._Alaska_E43		1	1
Clostridium_botulinum_B1_str._Okra		1	1
Clostridium_botulinum_Ba4_str._657		1	1
Clostridium_botulinum_A2_str._Kyoto		1	1
Clostridium_botulinum_A3_str._Loch_Maree		1	1
Clostridium_botulinum_A_str._Hall		1	1
Clostridium_botulinum_A_str._ATCC_19397		1	1
Carnobacterium_maltaromaticum_LMA28		1	1
Enterococcus_mundtii_QU_25		1	1
Enterococcus_faecalis_str._Symbioflor_1		1	1
Enterococcus_faecalis_OG1RF		1	1
Enterococcus_faecalis_V583		1	1
Leuconostoc_mesenteroides_subsp._mesenteroides_J18		1	1
Lactococcus_lactis_subsp._lactis_KLDS_4.0325		1	1
Lactococcus_lactis_subsp._lactis_CV56		1	1
Lactococcus_lactis_subsp._lactis_KF147		1	1
Lactococcus_lactis_subsp._cremoris_A76		1	1
Lactococcus_lactis_subsp._cremoris_NZ9000		1	1
Streptococcus_dysgalactiae_subsp._equisimilis_167		1	1
Streptococcus_dysgalactiae_subsp._equisimilis_AC-2713		1	1
Streptococcus_dysgalactiae_subsp._equisimilis_ATCC_12394		1	1
Streptococcus_dysgalactiae_subsp._equisimilis_RE378		1	1
Streptococcus_oligofermentans_AS_1.3089		1	1
Streptococcus_iniae_SF1		1	1
Streptococcus_parasanguinis_FW213		1	1
Streptococcus_agalactiae_ILRI112		1	1
Streptococcus_agalactiae_ILRI005		1	1
Streptococcus_agalactiae_09mas018883		1	1
Streptococcus_agalactiae_2-22		1	1
Streptococcus_agalactiae_GD201008-001		1	1
Streptococcus_agalactiae_NEM316		1	1
Streptococcus_agalactiae_2603V/R		1	1
Streptococcus_thermophilus_MN-ZLW-002		1	1
Streptococcus_thermophilus_JIM_8232		1	1
Streptococcus_thermophilus_ND03		1	1
Streptococcus_thermophilus_CNRZ1066		1	1
Streptococcus_thermophilus_LMG_18311		1	1
Streptococcus_suis_T15		1	1
Streptococcus_suis_TL13		1	1
Streptococcus_suis_SC070731		1	1
Streptococcus_suis_S735		1	1
Streptococcus_suis_ST3		1	1
Streptococcus_suis_D9		1	1
Streptococcus_suis_SS12		1	1
Streptococcus_suis_D12		1	1
Streptococcus_suis_ST1		1	1
Streptococcus_suis_A7		1	1
Streptococcus_suis_JS14		1	1
Streptococcus_suis_BM407		1	1
Streptococcus_suis_SC84		1	1
Streptococcus_suis_GZ1		1	1
Streptococcus_suis_98HAH33		1	1
Streptococcus_suis_05ZYH33		1	1
Streptococcus_salivarius_CCHSS3		1	1
Streptococcus_salivarius_JIM8777		1	1
Exiguobacterium_antarcticum_B7		2	2
Thermobacillus_composti_KWC4		1	1
Paenibacillus_mucilaginosus_KNP414		2	2
Paenibacillus_mucilaginosus_K02		2	2
Listeria_monocytogenes_EGD_sequence		1	1
Listeria_monocytogenes_N53-1		1	1
Listeria_monocytogenes_La111		1	1
Listeria_monocytogenes_serotype_4b_str._LL195		1	1
Listeria_monocytogenes_07PF0776		1	1
Listeria_monocytogenes_M7		1	1
Listeria_monocytogenes_J1-220		1	1
Listeria_monocytogenes_J1816		1	1
Listeria_monocytogenes_SLCC2376		1	1
Listeria_monocytogenes_SLCC5850		1	1
Listeria_monocytogenes_ATCC_19117		1	1
Listeria_monocytogenes_L312		1	1
Listeria_monocytogenes_SLCC2479		1	1
Listeria_monocytogenes_SLCC7179		1	1
Listeria_monocytogenes_SLCC2540		1	1
Listeria_monocytogenes_SLCC2378		1	1
Listeria_monocytogenes_serotype_1/2b_str._SLCC2755		1	1
Listeria_monocytogenes_serotype_1/2c_str._SLCC2372		1	1
Listeria_monocytogenes_serotype_7_str._SLCC2482		1	1
Listeria_monocytogenes_08-5578		1	1
Listeria_monocytogenes_08-5923		1	1
Listeria_monocytogenes_L99		1	1
Listeria_monocytogenes_HCC23		1	1
Listeria_monocytogenes_10403S		1	1
Listeria_monocytogenes_J0161		1	1
Listeria_monocytogenes_Finland_1998		1	1
Listeria_monocytogenes_FSL_R2-561		1	1
Listeria_monocytogenes_serotype_4b_str._F2365		1	1
Listeria_monocytogenes_EGD-e		1	1
Geobacillus_sp._C56-T3		1	1
Geobacillus_sp._Y412MC52		1	1
Geobacillus_sp._Y412MC61		1	1
Bacillus_amyloliquefaciens_subsp._plantarum_sequencing		2	2
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5033		2	2
Bacillus_amyloliquefaciens_subsp._plantarum_AS43.3		2	2
Bacillus_amyloliquefaciens_subsp._plantarum_YAU_B9601-Y2		2	2
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5113		2	2
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5036		2	2
Bacillus_amyloliquefaciens_subsp._plantarum_CAU_B946		2	2
Bacillus_amyloliquefaciens_LFB112		2	2
Bacillus_amyloliquefaciens_CC178		2	2
Bacillus_amyloliquefaciens_Y2		2	2
Bacillus_amyloliquefaciens_IT-45		2	2
Bacillus_amyloliquefaciens_XH7		2	2
Bacillus_amyloliquefaciens_LL3		2	2
Bacillus_amyloliquefaciens_TA208		2	2
Bacillus_amyloliquefaciens_DSM_7		2	2
Bacillus_licheniformis_9945A		1	1
Bacillus_subtilis_PY79		3	3
Bacillus_subtilis_XF-1		3	3
Bacillus_subtilis_QB928		3	3
Bacillus_subtilis_BSn5		3	3
Bacillus_subtilis_subsp._subtilis_str._BAB-1		3	3
Bacillus_subtilis_subsp._subtilis_str._BSP1		3	3
Bacillus_subtilis_subsp._subtilis_str._RO-NN-1		3	3
Bacillus_subtilis_subsp._subtilis_6051-HGW		3	3
Bacillus_subtilis_subsp._spizizenii_TU-B-10		3	3
Bacillus_subtilis_subsp._spizizenii_str._W23		3	3
Bacillus_subtilis_subsp._natto_BEST195		3	3
Bacillus_infantis_NRRL_B-14911		1	1
Bacillus_cereus_subsp._cytotoxis_NVH_391-98		1	1
Bacillus_toyonensis_BCT-7112		1	1
Bacillus_thuringiensis_HD-771		2	2
Bacillus_thuringiensis_HD-789		2	2
Bacillus_thuringiensis_MC28		2	2
Bacillus_thuringiensis_serovar_chinensis_CT-43		2	2
Bacillus_thuringiensis_YBT-1518		2	2
Bacillus_thuringiensis_Bt407		2	2
Bacillus_thuringiensis_serovar_konkukian_str._97-27		2	2
Bacillus_thuringiensis_serovar_kurstaki_str._HD73		2	2
Bacillus_thuringiensis_BMB171		2	2
Bacillus_thuringiensis_serovar_finitimus_YBT-020		2	2
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056		2	2
Bacillus_cereus_FRI-35		2	2
Bacillus_cereus_biovar_anthracis_str._CI		2	2
Bacillus_cereus_AH820		2	2
Bacillus_cereus_AH187		2	2
Bacillus_cereus_B4264		2	2
Bacillus_cereus_G9842		2	2
Bacillus_cereus_Q1		2	2
Bacillus_cereus_F837/76		2	2
Bacillus_cereus_NC7401		2	2
Bacillus_cereus_E33L		3	3
Bacillus_cereus_ATCC_14579		2	2
Bacillus_cereus_ATCC_10987		1	1
Bacillus_anthracis_str._H9401		2	2
Bacillus_anthracis_str._CDC_684		2	2
Bacillus_anthracis_str._'Ames_Ancestor'		2	2
Bacillus_anthracis_str._Sterne		2	2
Bacillus_anthracis_str._Ames		2	2
Bacillus_megaterium_WSH-002		2	2
Bacillus_megaterium_QM_B1551		2	2
Echinicola_vietnamensis_DSM_17526		1	1
Nonlabens_dokdonensis_DSW-6		1	1
Psychroflexus_torquis_ATCC_700755		1	1
Desulfovibrio_hydrothermalis_AM13_=_DSM_14728		2	2
Desulfovibrio_desulfuricans_ND132		1	1
Neisseria_meningitidis_WUE_2594		1	1
Neisseria_gonorrhoeae_FA_1090		1	1
Variovorax_paradoxus_B4		1	1
Methylobacterium_extorquens_DM4		1	1
Methylobacterium_extorquens_PA1		1	1
Vibrio_sp._EJY3		1	1
Vibrio_parahaemolyticus_BB22OP		1	1
Vibrio_alginolyticus_NBRC_15630_=_ATCC_17749		1	1
Shewanella_sp._ANA-3		1	1
Shewanella_baltica_BA175		1	1
Shewanella_baltica_OS678		1	1
Shewanella_baltica_OS117		1	1
Shewanella_baltica_OS223		1	1
Shewanella_baltica_OS195		1	1
Shewanella_baltica_OS155		1	1
Shewanella_sp._MR-7		1	1
Glaciecola_psychrophila_170		1	1
Alteromonas_macleodii_str._'Ionian_Sea_UM4b'		1	1
Alteromonas_macleodii_str._'Ionian_Sea_UM7'		1	1
Alteromonas_macleodii_str._'Ionian_Sea_U8'		1	1
Alteromonas_macleodii_str._'Ionian_Sea_U7'		1	1
Alteromonas_macleodii_str._'Ionian_Sea_U4'		1	1
Alteromonas_macleodii_str._'Aegean_Sea_MED64'		1	1
Alteromonas_macleodii_str._'English_Channel_615'		1	1
Alteromonas_macleodii_AltDE1		1	1
Alteromonas_macleodii_str._'English_Channel_673'		1	1
Alteromonas_macleodii_str._'Balearic_Sea_AD45'		1	1
Alteromonas_macleodii_str._'Black_Sea_11'		1	1
Alteromonas_macleodii_ATCC_27126		1	1
Pseudomonas_fluorescens_F113		1	1
Pseudomonas_fluorescens_A506		1	1
Acinetobacter_junii__SH205		1	1
Candidatus_Nitrososphaera_gargensis_Ga9.2		1	1
Pyrococcus_sp._NA2		1	1
Natronobacterium_gregoryi_SP2		1	1

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Longest transcript per gene

Genome		Number	Proteins
Homo_sapiens_69_37	(Human)	532	451
Pan_troglodytes_69_2.1.4	(Chimpanzee)	446	381
Gorilla_gorilla_69_3.1	(Western gorilla)	490	418
Pongo_abelii_69_2	(Sumatran orangutan)	458	392
Nomascus_leucogenys_69_1.0	(Northern white-cheeked gibbon)	442	381
Macaca_mulatta_69_1	(Rhesus monkey)	461	394
Callithrix_jacchus_69_3.2.1	(White-tufted-ear marmoset)	492	422
Otolemur_garnettii_69_3	(Small-eared galago)	468	400
Microcebus_murinus_69_1	(Gray mouse lemur)	374	321
Rattus_norvegicus_69_3.4	(Norway rat)	481	410
Mus_musculus_69_38	(House mouse)	488	412
Dipodomys_ordii_69_1	(Ord's kangaroo rat)	409	349
Ictidomys_tridecemlineatus_69_2	(Thirteen-lined ground squirrel)	422	360
Cavia_porcellus_69_3	(Domestic guinea pig)	460	390
Oryctolagus_cuniculus_69_2	(Rabbit)	445	378
Ochotona_princeps_69	(American pika)	391	328
Tupaia_belangeri_69	(Northern tree shrew)	334	296
Sus_scrofa_69_10.2	(Pig)	464	404
Bos_taurus_69_3.1	(Cattle)	470	402
Vicugna_pacos_69_1	(Alpaca)	255	219
Tursiops_truncatus_69_1	(Bottlenose dolphin)	434	371
Mustela_putorius_furo_69_1.0	(Domestic ferret)	468	397
Ailuropoda_melanoleuca_69_1	(Giant panda)	469	399
Canis_familiaris_69_3.1	(Dog)	480	408
Felis_catus_69	(Domestic cat)	338	293
Equus_caballus_69_2	(Horse)	459	394
Myotis_lucifugus_69_2.0	(Little brown bat)	427	364
Pteropus_vampyrus_69_1	(Large flying fox)	443	381
Sorex_araneus_69_1	(European shrew)	271	239
Erinaceus_europaeus_69	(Western European hedgehog)	330	286
Procavia_capensis_69_1	(Cape rock hyrax)	387	330
Loxodonta_africana_69_3	(African savanna elephant)	469	403
Echinops_telfairi_69	(Small Madagascar hedgehog)	361	313
Dasypus_novemcinctus_69_2	(Nine-banded armadillo)	318	276
Choloepus_hoffmanni_69_1	(Hoffmann's two-fingered sloth)	238	207
Macropus_eugenii_69_1.0	(Tammar wallaby)	405	339
Sarcophilus_harrisii_69_7.0	(Tasmanian devil)	429	368
Monodelphis_domestica_69_5	(Gray short-tailed opossum)	462	395
Ornithorhynchus_anatinus_69_5	(Platypus)	389	347
Petromyzon_marinus_69_7.0	(Sea lamprey)	230	199
Meleagris_gallopavo_69_2	(Turkey)	406	348
Gallus_gallus_69_2	(Chicken)	408	346
Taeniopygia_guttata_69_3.2.4	(Zebra finch)	439	370
Pelodiscus_sinensis_69_1.0	(Chinese soft-shelled turtle)	416	350
Anolis_carolinensis_69_2.0	(Green anole)	423	362
Xenopus_tropicalis_69_4.2	(Tropical clawed frog)	446	382
Latimeria_chalumnae_69_1	(Coelacanth)	472	405
Gadus_morhua_69_1	(Atlantic cod)	576	497
Tetraodon_nigroviridis_69_8	(Spotted green pufferfish)	641	548
Takifugu_rubripes_69_4	(Torafugu)	619	528
Gasterosteus_aculeatus_69_1	(Three-spined stickleback)	587	506
Oryzias_latipes_69_1	(Japanese medaka)	557	473
Xiphophorus_maculatus_69_4.4.2	(Southern platyfish)	638	537
Oreochromis_niloticus_69_1.0	(Nile tilapia)	652	547
Danio_rerio_69_9	(Zebrafish)	662	564
Ciona_savignyi_69_2.0	(Pacific transparent sea squirt)	139	127
Ciona_intestinalis_69	(Vase tunicate)	167	147
Drosophila_melanogaster_69_5	(Fruit fly)	166	148
Caenorhabditis_elegans_69_215	(Roundworm)	135	126
Saccharomyces_cerevisiae_69_4	(Baker's yeast)	41	40
Arabidopsis_thaliana_10	(Thale cress)	66	66

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Others

Genome		Number	Proteins
Homo_sapiens_75_37_(old_version_GRC)	(Human)	2126	1891
Homo_sapiens__(NCBI_version)	(Human)	843	734
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)	(House mouse)	480	404
Heliconius_numata__(Incomplete)		20	20
Loa_loa_v3.3_(Request)	(Eye worm)	151	141
Wuchereria_bancrofti_v1.0_(Request)	(Agent of lymphatic filariasis)	127	121
Brugia_malayi_v1.0_(Duplicate)	(Agent of lymphatic filariasis)	119	111
Moniliophthora_perniciosa_FA553__(Genome_survey)		19	19
Encephalitozoon_intestinalis__(endoparasite)		7	7
Encephalitozoon_cuniculi_(endoparasite)		7	7
Picea_sitchensis__(Incomplete)	(Sitka spruce)	3	3
Lotus_japonicus__(Early_assembly)		49	49
Malus_x_domestica_(Duplicate)	(Apple)	97	97
Ricinus_communis__(Early_assembly)	(Castor bean)	49	49
Nicotiana_benthamiana_0.4.4_(Early_draft)		103	100
Solanum_pimpinellifolium_A-1.0_(Early_draft)	(Currant tomato)	65	65
Solanum_lycopersicum_v2.3_(Early_assembly)	(Tomato)	66	66
Phoenix_dactylifera__(Early_draft)	(Date palm)	39	38
Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC)		1	1
NCBI_plasmid_sequences_(Plasmids)		1	1
NCBI_viral_sequences_(Viral)		2	2
Protein_Data_Bank_(all_PDB_sequenc)		1016	998
Protozoadb_2010_08_(Protozoadb)		1365	1315
UniProt__viral_sequences_(Viral)		8	8
PDB_chains_(SCOP_1.75)_(PDB)		146	145
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ)		2018	2018
STRING_v9.0.5_(STRING)		19619	17279
Uniprot_2018_03_genome		226141	203244
TargetDB__(Targets)		836	760
NCBI_2017_08_genome		382622	335655

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