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Home > SCOP hierarchy > alpha-D-mannose-specific plant lectins > Domain combinations

Domain combinations for alpha-D-mannose-specific plant lectins superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a alpha-D-mannose-specific plant lectins domain in that genome.

Complete genomes
Genome Number Proteins

Saccoglossus_kowalevskii_v3.0 2 1

Lepisosteus_oculatus_76 (Spotted gar) 2 2

Gadus_morhua_76_1 (Atlantic cod) 2 2

Tetraodon_nigroviridis_76_8 (Spotted green pufferfish) 1 1

Takifugu_rubripes_76_4 (Torafugu) 2 2

Gasterosteus_aculeatus_76_1 (Three-spined stickleback) 3 3

Xiphophorus_maculatus_76_4.4.2 (Southern platyfish) 2 2

Poecilia_formosa_76 (Amazon molly) 3 3

Oreochromis_niloticus_76_1.0 (Nile tilapia) 1 1

Astyanax_mexicanus_76 (Mexican tetra) 2 2

Adineta_vaga 2 2

Culex_pipiens_quinquefasciatus_ (Southern house mosquito) 12 12

Daphnia_pulex_ (Common water flea) 2 2

Mnemiopsis_leidyi (Sea walnut) 10 8

Hydra_vulgaris 4 3

Sphaeroforma_arctica_JP610_ 8 7

Capsaspora_owczarzaki_ATCC_30864_ 1 1

Conidiobolus_coronatus_NRRL28638_v1.0 5 3

Mortierella_verticillata_NRRL_6337_ 2 2

Mixia_osmundae_IAM_14324_v1.0 1 1

Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 1 1

Melampsora_laricis-populina_ 2 2

Rhodotorula_graminis_WP1_v1.0 1 1

Sphaerobolus_stellatus_v1.0 1 1

Schizophyllum_commune_ 1 1

Stereum_hirsutum_FP-91666_SS1__v1.0 1 1

Neurospora_tetrasperma_ 1 1

Neurospora_crassa_OR74A_ 1 1

Fusarium_graminearum_ 3 3

Nectria_haematococca_mpVI_ 7 2

Fusarium_oxysporum_f._sp._lycopersici_4286_ 3 3

Fusarium_verticillioides_7600_ 2 2

Trichoderma_asperellum_CBS_433.97_v1.0 3 2

Trichoderma_atroviride_ 2 2

Trichoderma_citrinoviride_v1.0 2 1

Trichoderma_reesei_1.2 2 1

Trichoderma_virens_Gv29-8_ 1 1

Trichoderma_longibrachiatum_ATCC_18648_v1.0 2 1

Trichoderma_harzianum_CBS_226.95_v1.0 2 1

Coccidioides_posadasii_RMSCC_3488_ 1 1

Coccidioides_immitis_RS_ 1 1

Aspergillus_zonatus_v1.0 2 2

Aspergillus_glaucus 1 1

Aspergillus_tubingensis_v1.0 1 1

Aspergillus_wentii_v1.0 1 1

Aspergillus_oryzae_RIB40_ 3 3

Aspergillus_flavus_NRRL3357_ 2 2

Allomyces_macrogynus_ATCC_38327_ 5 5

Dictyostelium_discoideum 5 5

Dictyostelium_purpureum_ 10 4

Selaginella_moellendorffii_ 230 225

Pinus_taeda (Loblolly pine) 62 51

Picea_abies (Norway spruce) 69 56

Eucalyptus_grandis_v201 (Rose gum) 370 345

Theobroma_cacao_B97-61/B2_v1 (Cacao) 142 127

Gossypium_raimondii_v221 155 141

Citrus_clementina_v165 155 147

Citrus_sinensis_v154 (Sweet orange) 173 160

Thellungiella_halophila_v173 51 48

Brassica_rapa_Chiifu-401_1.2 (Field mustard) 82 73

Capsella_rubella_v183 46 44

Arabidopsis_lyrata_ (Lyrate rockcress) 66 64

Arabidopsis_thaliana_10 (Thale cress) 55 52

Carica_papaya_ (Papaya) 44 40

Medicago_truncatula_ (Barrel medic) 236 231

Phaseolus_vulgaris_v186 (French bean) 110 107

Glycine_max_v109 (Soybean) 164 155

Cucumis_sativus_v122 (Cucumber) 56 54

Fragaria_vesca_ (Wild strawberry) 130 112

Malus_domestica_v196 (Apple) 326 293

Prunus_persica_v139 (Peach) 109 103

Linum_usitatissimum_v200 (Flax) 125 115

Manihot_esculenta_v147 (Cassava) 130 118

Populus_trichocarpa_v156 (Black cottonwood) 290 261

Vitis_vinifera_ (Wine grape) 83 70

Mimulus_guttatus_v140 (Spotted monkey flower) 62 55

Solanum_lycopersicum_v.2.3 (Tomato) 102 94

Solanum_tuberosum_ (Potato) 149 135

Actinidia_chinensis_Hongyang_ 84 70

Aquilegia_coerulea_v195 101 98

Triticum_urartu_22 141 133

Triticum_aestivum_22 (Bread wheat) 265 263

Aegilops_tauschii_22 157 153

Brachypodium_distachyon_ (Stiff brome) 93 93

Oryza_barthii_22 (African wild rice) 183 132

Oryza_meridionalis_22 141 126

Oryza_glumaepatula_22 178 145

Oryza_glaberrima (African rice) 109 106

Oryza_punctata_22 153 122

Oryza_nivara_22 188 150

Oryza_brachyantha_22 (Malo sina) 91 87

Oryza_sativa_ssp._japonica_5.0 (Japanese rice) 155 147

Oryza_sativa_v193 (Rice) 154 146

Phyllostachys_heterocyclavar._pubescens (Kikko-chiku) 87 83

Panicum_virgatum_v202 (Switchgrass) 133 128

Setaria_italica_v164 (Foxtail millet) 90 85

Zea_mays_subsp._mays_ (Maize) 75 74

Zea_mays_v181 (Maize) 81 80

Sorghum_bicolor_ (Sorghum) 101 97

Musa_balbisiana (Balbis banana) 89 74

Musa_acuminata_22 (Wild Malaysian banana) 69 62

Amborella_trichopoda_22 71 55

Physcomitrella_patens 11 9

Coccomyxa_subellipsoidea_sp._C-169_v2 2 2

Chlorella_vulgaris_ 2 2

Volvox_carteri_f._nagariensis_ 1 1

Chlamydomonas_reinhardtii_4.0 1 1

Micromonas_pusilla_CCMP1545_v3.0 2 1

Bigelowiella_natans_CCMP2755_22 2 2

Ectocarpus_siliculosus 3 3

Fragilariopsis_cylindrus 10 8

Paramecium_tetraurelia_ 2 2

Tetrahymena_thermophila_SB210_1_ 10 4

Symbiodinium_minutum_clade_B1_v1.2 5 2

Naegleria_gruberi_ 11 9

Guillardia_theta_CCMP2712_v1.0_ 1 1

Emiliania_huxleyi_CCMP1516_ 5 4

Leptolyngbya_sp._PCC_7376 1 1

Synechococcus_sp._PCC_6312 1 1

Acidimicrobium_ferrooxidans_DSM_10331 1 1

Catenulispora_acidiphila_DSM_44928 4 4

Kitasatospora_setae_KM-6054 1 1

Streptomyces_coelicolor_A3(2) 1 1

Streptomyces_sp._PAMC26508 3 3

Streptomyces_flavogriseus_ATCC_33331 3 3

Streptomyces_griseus_subsp._griseus_NBRC_13350 1 1

Streptomyces_cattleya_NRRL_8057_=_DSM_46488 2 2

Streptomyces_hygroscopicus_subsp._jinggangensis_5008 2 2

Actinoplanes_sp._N902-109 5 5

Actinoplanes_missouriensis_431 1 1

Segniliparus_rotundus_DSM_44985 1 1

Tsukamurella_paurometabola_DSM_20162 1 1

Rhodococcus_erythropolis_PR4 1 1

Nocardia_farcinica_IFM_10152 1 1

Mycobacterium_abscessus_ATCC_19977 1 1

Mycobacterium_ulcerans_Agy99 1 1

Mycobacterium_marinum_M 1 1

Mycobacterium_smegmatis_str._MC2_155 1 1

Cellulomonas_flavigena_DSM_20109 5 2

Cellulomonas_fimi_ATCC_484 5 2

[Cellvibrio]_gilvus_ATCC_13127 4 1

Arthrobacter_aurescens_TC1 1 1

Arthrobacter_sp._Rue61a 1 1

Arthrobacter_sp._FB24 2 1

Ruminococcus_albus_7 2 2

Brevibacillus_brevis_NBRC_100599 1 1

Paenibacillus_mucilaginosus_3016 6 5

Chlorobium_luteolum_DSM_273 1 1

Haliscomenobacter_hydrossis_DSM_1100 2 2

Spirochaeta_smaragdinae_DSM_11293 2 2

Candidatus_Solibacter_usitatus_Ellin6076 1 1

Granulicella_mallensis_MP5ACTX8 1 1

Terriglobus_saanensis_SP1PR4 1 1

Terriglobus_roseus_DSM_18391 2 1

Candidatus_Saccharibacteria_bacterium_RAAC3_TM7_1 1 1

Geobacter_daltonii_FRC-32 1 1

Geobacter_uraniireducens_Rf4 1 1

Geobacter_sulfurreducens_KN400 1 1

Geobacter_metallireducens_GS-15 1 1

Pelobacter_propionicus_DSM_2379 1 1

Sorangium_cellulosum_'So_ce_56' 2 2

Stigmatella_aurantiaca_DW4/3-1 1 1

Corallococcus_coralloides_DSM_2259 2 2

Chromobacterium_violaceum_ATCC_12472 1 1

Cupriavidus_metallidurans_CH34 2 1

Burkholderia_thailandensis_E264 2 1

Burkholderia_pseudomallei_1106a 2 1

Burkholderia_ambifaria_AMMD 2 1

Burkholderia_cenocepacia_HI2424 5 2

Asticcacaulis_excentricus_CB_48 1 1

Tistrella_mobilis_KA081020-065 1 1

Agrobacterium_vitis_S4 1 1

Xanthomonas_axonopodis_pv._citri_str._306 2 1

Pseudomonas_sp._UW4 1 1

Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 1 1

Pseudomonas_protegens_Pf-5 4 2

Francisella_philomiragia_subsp._philomiragia_ATCC_25017 1 1

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Longest transcript per gene
Genome Number Proteins

Gadus_morhua_69_1 (Atlantic cod) 2 2

Tetraodon_nigroviridis_69_8 (Spotted green pufferfish) 1 1

Takifugu_rubripes_69_4 (Torafugu) 2 2

Gasterosteus_aculeatus_69_1 (Three-spined stickleback) 3 3

Xiphophorus_maculatus_69_4.4.2 (Southern platyfish) 2 2

Oreochromis_niloticus_69_1.0 (Nile tilapia) 1 1

Arabidopsis_thaliana_10 (Thale cress) 50 47

Others
Genome Number Proteins

Lotus_japonicus__(Early_assembly) 58 56

Malus_x_domestica_(Duplicate) (Apple) 326 293

Ricinus_communis__(Early_assembly) (Castor bean) 95 81

Nicotiana_benthamiana_0.4.4_(Early_draft) 117 100

Solanum_pimpinellifolium_A-1.0_(Early_draft) (Currant tomato) 101 93

Solanum_lycopersicum_v2.3_(Early_assembly) (Tomato) 102 94

Phoenix_dactylifera__(Early_draft) (Date palm) 21 20

NCBI_plasmid_sequences_(Plasmids) 9 7

STRING_v9.0.5_(STRING) 1137 1051

Uniprot_2018_03_genome 16394 14728

TargetDB__(Targets) 2 1

NCBI_2017_08_genome 16960 14433

UniProt__viral_sequences_(Viral) 1 1

Protein_Data_Bank_(all_PDB_sequenc) 142 120

NCBI_viral_sequences_(Viral) 5 5

PDB_chains_(SCOP_1.75)_(PDB) 13 12

SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 308 302

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Domain combinations for alpha-D-mannose-specific plant lectins superfamily in groups of genomes