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Domain combinations for RuBisCo, C-terminal domain superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a RuBisCo, C-terminal domain domain in that genome.

Complete genomes
Genome     Number   Proteins
Pteropus_vampyrus_76_1   (Large flying fox)   1 1
Selaginella_moellendorffii_ 1 1
Pinus_taeda   (Loblolly pine)   1 1
Picea_abies   (Norway spruce)   1 1
Theobroma_cacao_B97-61/B2_v1   (Cacao)   1 1
Gossypium_raimondii_v221 7 6
Citrus_clementina_v165 1 1
Thellungiella_halophila_v173 1 1
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   2 2
Arabidopsis_lyrata_   (Lyrate rockcress)   3 3
Arabidopsis_thaliana_10   (Thale cress)   3 3
Carica_papaya_   (Papaya)   3 3
Medicago_truncatula_   (Barrel medic)   15 15
Phaseolus_vulgaris_v186   (French bean)   3 3
Cucumis_sativus_v122   (Cucumber)   2 2
Fragaria_vesca_   (Wild strawberry)   3 3
Malus_domestica_v196   (Apple)   3 3
Manihot_esculenta_v147   (Cassava)   2 2
Populus_trichocarpa_v156   (Black cottonwood)   3 3
Vitis_vinifera_   (Wine grape)   2 2
Mimulus_guttatus_v140   (Spotted monkey flower)   1 1
Solanum_lycopersicum_v.2.3   (Tomato)   10 10
Solanum_tuberosum_   (Potato)   1 1
Actinidia_chinensis_Hongyang_ 3 2
Aquilegia_coerulea_v195 1 1
Triticum_urartu_22 5 5
Triticum_aestivum_22   (Bread wheat)   54 54
Aegilops_tauschii_22 1 1
Brachypodium_distachyon_   (Stiff brome)   4 4
Oryza_barthii_22   (African wild rice)   3 3
Oryza_meridionalis_22 2 2
Oryza_glumaepatula_22 2 2
Oryza_glaberrima   (African rice)   10 9
Oryza_brachyantha_22   (Malo sina)   3 3
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   4 4
Oryza_sativa_v193   (Rice)   4 4
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   4 4
Setaria_italica_v164   (Foxtail millet)   1 1
Zea_mays_subsp._mays_   (Maize)   6 6
Zea_mays_v181   (Maize)   8 8
Sorghum_bicolor_   (Sorghum)   4 4
Musa_balbisiana   (Balbis banana)   2 2
Musa_acuminata_22   (Wild Malaysian banana)   3 3
Amborella_trichopoda_22 5 5
Asterochloris_sp._Cgr/DA1pho_v1.0 1 1
Ostreococcus_sp._RCC809_ 2 2
Ostreococcus_lucimarinus_CCE9901_ 2 2
Ostreococcus_tauri_ 1 1
Bathycoccus_prasinos_ 2 2
Micromonas_sp._RCC299_ 2 2
Micromonas_pusilla_CCMP1545_v3.0 2 2
Cyanidioschyzon_merolae_strain_10D_22 1 1
Cyanidioschyzon_merolae 1 1
Porphyridium_purpureum_02_2012 1 1
Thalassiosira_pseudonana_CCMP1335 1 1
Symbiodinium_minutum_clade_B1_v1.2 5 4
Leptolyngbya_sp._PCC_7376 1 1
Pseudanabaena_sp._PCC_7367 1 1
Acaryochloris_marina_MBIC11017 1 1
Synechocystis_sp._PCC_6803 1 1
Thermosynechococcus_sp._NK55 1 1
Thermosynechococcus_elongatus_BP-1 1 1
Synechococcus_sp._PCC_7502 1 1
Synechococcus_sp._PCC_6312 1 1
Synechococcus_sp._CC9311 1 1
Synechococcus_elongatus_PCC_7942 1 1
Prochlorococcus_marinus_str._MIT_9515 1 1
Microcoleus_sp._PCC_7113 2 2
Trichodesmium_erythraeum_IMS101 1 1
Geitlerinema_sp._PCC_7407 2 2
Cyanothece_sp._PCC_8802 2 2
Gloeocapsa_sp._PCC_7428 1 1
Halothece_sp._PCC_7418 1 1
Microcystis_aeruginosa_NIES-843 2 2
Gloeobacter_violaceus_PCC_7421 1 1
Rivularia_sp._PCC_7116 2 2
Calothrix_sp._PCC_7507 1 1
Anabaena_variabilis_ATCC_29413 1 1
'Nostoc_azollae'_0708 1 1
Nostoc_sp._PCC_7107 1 1
Nostoc_punctiforme_PCC_73102 1 1
Nostoc_sp._PCC_7120 1 1
Nostoc_sp._PCC_7524 1 1
Anabaena_sp._90 1 1
Acidimicrobium_ferrooxidans_DSM_10331 1 1
Nakamurella_multipartita_DSM_44233 1 1
Geodermatophilus_obscurus_DSM_43160 2 2
Thermomonospora_curvata_DSM_43183 1 1
Pseudonocardia_dioxanivorans_CB1190 1 1
Gordonia_sp._KTR9 1 1
Nocardia_cyriacigeorgica_GUH-2 1 1
Arthrobacter_chlorophenolicus_A6 1 1
Arthrobacter_aurescens_TC1 1 1
Arthrobacter_sp._Rue61a 1 1
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 1 1
Thermomicrobium_roseum_DSM_5159 1 1
Chloroflexus_sp._MS-G 1 1
Oceanithermus_profundus_DSM_14977 1 1
Meiothermus_silvanus_DSM_9946 2 2
Meiothermus_ruber_DSM_1279 1 1
Veillonella_parvula_DSM_2008 1 1
Clostridium_clariflavum_DSM_19732 1 1
Sulfobacillus_acidophilus_DSM_10332 2 2
Thermodesulfobium_narugense_DSM_14796 1 1
Tepidanaerobacter_acetatoxydans_Re1 1 1
Ammonifex_degensii_KC4 1 1
Exiguobacterium_sp._MH3 1 1
Exiguobacterium_sp._AT1b 1 1
Exiguobacterium_sibiricum_255-15 1 1
Kyrpidia_tusciae_DSM_2912 1 1
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_DSM_446 1 1
Brevibacillus_brevis_NBRC_100599 1 1
Paenibacillus_sp._JDR-2 1 1
Paenibacillus_terrae_HPL-003 1 1
Paenibacillus_mucilaginosus_3016 2 2
Paenibacillus_polymyxa_M1 1 1
Anoxybacillus_flavithermus_WK1 1 1
Geobacillus_thermoleovorans_CCB_US3_UF5 1 1
Geobacillus_kaustophilus_HTA426 1 1
Geobacillus_sp._GHH01 1 1
Geobacillus_sp._WCH70 1 1
Geobacillus_thermodenitrificans_NG80-2 1 1
Bacillus_sp._JS 1 1
Bacillus_amyloliquefaciens_FZB42 1 1
Bacillus_atrophaeus_1942 1 1
Bacillus_subtilis_subsp._subtilis_str._168 1 1
Bacillus_licheniformis_DSM_13_=_ATCC_14580 1 1
Bacillus_weihenstephanensis_KBAB4 1 1
Bacillus_thuringiensis_str._Al_Hakam 1 1
Bacillus_cereus_03BB102 1 1
Bacillus_anthracis_str._A0248 1 1
Bacillus_pseudofirmus_OF4 1 1
Bacillus_clausii_KSM-K16 1 1
Bacillus_pumilus_SAFR-032 1 1
Bacillus_megaterium_DSM_319 1 1
Pelodictyon_phaeoclathratiforme_BU-1 1 1
Chlorobium_luteolum_DSM_273 1 1
Chlorobium_chlorochromatii_CaD3 1 1
Chlorobium_phaeobacteroides_DSM_266 1 1
Chlorobium_phaeovibrioides_DSM_265 1 1
Chlorobium_limicola_DSM_245 1 1
Chlorobaculum_parvum_NCIB_8327 1 1
Chlorobium_tepidum_TLS 1 1
Chloroherpeton_thalassium_ATCC_35110 1 1
Prosthecochloris_aestuarii_DSM_271 1 1
Niastella_koreensis_GR20-10 1 1
Rhodothermus_marinus_DSM_4252 1 1
Dyadobacter_fermentans_DSM_18053 1 1
Pedobacter_heparinus_DSM_2366 1 1
Sphingobacterium_sp._21 1 1
Isosphaera_pallida_ATCC_43644 1 1
Planctomyces_limnophilus_DSM_3776 1 1
Methylacidiphilum_infernorum_V4 1 1
Thermotoga_lettingae_TMO 1 1
Persephonella_marina_EX-H1 1 1
Candidatus_Nitrospira_defluvii 1 1
Leptospirillum_ferrooxidans_C2-3 2 2
Candidatus_Methylomirabilis_oxyfera 2 2
candidate_division_SR1_bacterium_RAAC1_SR1_1 1 1
Acidithiobacillus_ferrivorans_SS3 4 4
Acidithiobacillus_caldus_SM-1 3 3
Acidithiobacillus_ferrooxidans_ATCC_53993 4 4
Desulfovibrio_aespoeensis_Aspo-2 1 1
Dechloromonas_aromatica_RCB 1 1
Azoarcus_sp._KH32C 1 1
Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 1 1
Methylibium_petroleiphilum_PM1 2 2
Thiomonas_arsenitoxydans 2 2
Thiomonas_intermedia_K12 2 2
Rubrivivax_gelatinosus_IL144 1 1
Leptothrix_cholodnii_SP-6 1 1
Burkholderia_phytofirmans_PsJN 1 1
Burkholderia_phymatum_STM815 1 1
Burkholderia_xenovorans_LB400 2 2
Cupriavidus_taiwanensis_LMG_19424 1 1
Cupriavidus_metallidurans_CH34 1 1
Cupriavidus_necator_N-1 2 2
Ralstonia_eutropha_H16 2 2
Burkholderia_sp._RPE64 2 2
Burkholderia_sp._CCGE1002 1 1
Delftia_acidovorans_SPH-1 1 1
Polaromonas_sp._JS666 2 2
Polaromonas_naphthalenivorans_CJ2 1 1
Variovorax_paradoxus_S110 2 2
Rhodoferax_ferrireducens_T118 1 1
Acidovorax_sp._KKS102 1 1
Advenella_kashmirensis_WT001 2 2
Bordetella_bronchiseptica_RB50 1 1
Achromobacter_xylosoxidans_A8 1 1
Thiobacillus_denitrificans_ATCC_25259 2 2
Nitrosospira_multiformis_ATCC_25196 1 1
Nitrosomonas_sp._Is79A3 2 2
Nitrosomonas_eutropha_C91 1 1
Nitrosomonas_europaea_ATCC_19718 1 1
Sideroxydans_lithotrophicus_ES-1 2 2
Gallionella_capsiferriformans_ES-2 1 1
Jannaschia_sp._CCS1 1 1
Rhodobacter_sphaeroides_ATCC_17029 2 2
Rhodobacter_capsulatus_SB_1003 2 2
Paracoccus_denitrificans_PD1222 1 1
Rhodospirillum_photometricum_DSM_122 3 3
Magnetospirillum_magneticum_AMB-1 1 1
Rhodospirillum_centenum_SW 2 2
Rhodospirillum_rubrum_F11 2 2
Azospirillum_lipoferum_4B 1 1
Azospirillum_brasilense_Sp245 1 1
Acidiphilium_multivorum_AIU301 2 2
Acidiphilium_cryptum_JF-5 2 2
Polymorphum_gilvum_SL003B-26A1 1 1
Starkeya_novella_DSM_506 2 2
Xanthobacter_autotrophicus_Py2 2 2
Azorhizobium_caulinodans_ORS_571 1 1
Methylobacterium_sp._4-46 1 1
Methylobacterium_nodulans_ORS_2060 2 2
Ochrobactrum_anthropi_ATCC_49188 2 2
Sinorhizobium_fredii_NGR234 2 2
Sinorhizobium_medicae_WSM419 2 2
Sinorhizobium_meliloti_AK83 2 2
Rhizobium_etli_CIAT_652 1 1
Rhizobium_leguminosarum_bv._viciae_3841 1 1
Agrobacterium_radiobacter_K84 1 1
Mesorhizobium_opportunistum_WSM2075 2 2
Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 2 2
Mesorhizobium_loti_MAFF303099 1 1
Methylocella_silvestris_BL2 2 2
Rhodomicrobium_vannielii_ATCC_17100 3 3
Oligotropha_carboxidovorans_OM4 1 1
Rhodopseudomonas_palustris_BisA53 4 4
Nitrobacter_winogradskyi_Nb-255 2 2
Nitrobacter_hamburgensis_X14 3 3
Bradyrhizobium_japonicum_USDA_110 1 1
Bradyrhizobium_sp._ORS_278 2 2
Marinomonas_sp._MWYL1 1 1
Marinomonas_mediterranea_MMB-1 1 1
Chromohalobacter_salexigens_DSM_3043 1 1
Halomonas_elongata_DSM_2581 1 1
Methylococcus_capsulatus_str._Bath 1 1
Halothiobacillus_neapolitanus_c2 2 2
Alkalilimnicola_ehrlichii_MLHE-1 2 2
Thioalkalivibrio_sulfidophilus_HL-EbGr7 1 1
Thioalkalivibrio_sp._K90mix 1 1
Halorhodospira_halophila_SL1 2 2
Allochromatium_vinosum_DSM_180 3 3
Thiocystis_violascens_DSM_198 4 4
Nitrosococcus_watsonii_C-113 1 1
Nitrosococcus_halophilus_Nc4 2 2
Nitrosococcus_oceani_ATCC_19707 1 1
Candidatus_Ruthia_magnifica_str._Cm_(Calyptogena_magnifica) 1 1
Candidatus_Vesicomyosocius_okutanii_HA 1 1
Pseudomonas_putida_F1 1 1
Methylophaga_sp._JAM1 1 1
Thiomicrospira_crunogena_XCL-2 3 3
Thioalkalimicrobium_cyclicum_ALM1 1 1
Hyperthermus_butylicus_DSM_5456 1 1
Thermogladius_cellulolyticus_1633 1 1
Ignisphaera_aggregans_DSM_17230 1 1
Thermosphaera_aggregans_DSM_11486 1 1
Staphylothermus_hellenicus_DSM_12710 1 1
Staphylothermus_marinus_F1 1 1
Desulfurococcus_fermentans_DSM_16532 1 1
Desulfurococcus_kamchatkensis_1221n 1 1
Desulfurococcus_mucosus_DSM_2162 1 1
Thermofilum_sp._1910b 1 1
Thermofilum_pendens_Hrk_5 1 1
Methanocella_arvoryzae_MRE50 1 1
Methanocella_conradii_HZ254 1 1
Methanocella_paludicola_SANAE 1 1
Methanosaeta_harundinacea_6Ac 1 1
Methanosaeta_thermophila_PT 1 1
Methanosaeta_concilii_GP6 1 1
Methanosalsum_zhilinae_DSM_4017 1 1
Methanohalobium_evestigatum_Z-7303 1 1
Methanococcoides_burtonii_DSM_6242 1 1
Methanosarcina_acetivorans_C2A 1 1
Methanosarcina_mazei_Go1 1 1
Methanosarcina_barkeri_str._Fusaro 1 1
Methanohalophilus_mahii_DSM_5219 1 1
Methanosphaerula_palustris_E1-9c 1 1
Methanoregula_boonei_6A8 1 1
Methanospirillum_hungatei_JF-1 1 1
Methanocorpusculum_labreanum_Z 1 1
Methanoplanus_petrolearius_DSM_11571 1 1
Methanoculleus_bourgensis_MS2 1 1
Methanoculleus_marisnigri_JR1 1 1
Ferroglobus_placidus_DSM_10642 1 1
Archaeoglobus_profundus_DSM_5631 1 1
Archaeoglobus_veneficus_SNP6 1 1
Archaeoglobus_fulgidus_DSM_4304 2 2
Thermococcus_sp._4557 1 1
Thermococcus_onnurineus_NA1 1 1
Thermococcus_kodakarensis_KOD1 1 1
Thermococcus_gammatolerans_EJ3 1 1
Thermococcus_sibiricus_MM_739 1 1
Thermococcus_barophilus_MP 1 1
Pyrococcus_sp._ST04 1 1
Pyrococcus_yayanosii_CH1 1 1
Pyrococcus_horikoshii_OT3 1 1
Pyrococcus_abyssi_GE5 1 1
Pyrococcus_furiosus_COM1 1 1
Thermoplasmatales_archaeon_BRNA1 1 1
Natrinema_sp._J7-2 1 1
Natrialba_magadii_ATCC_43099 1 1
Halogeometricum_borinquense_DSM_11551 1 1
Haloferax_mediterranei_ATCC_33500 1 1
Haloferax_volcanii_DS2 1 1
Halomicrobium_mukohataei_DSM_12286 1 1
Natronomonas_pharaonis_DSM_2160 1 1
Methanotorris_igneus_Kol_5 1 1
Methanocaldococcus_sp._FS406-22 1 1
Methanocaldococcus_fervens_AG86 1 1
Methanocaldococcus_vulcanius_M7 1 1
Methanocaldococcus_jannaschii_DSM_2661 1 1
Methanothermococcus_okinawensis_IH1 1 1
Aciduliprofundum_sp._MAR08-339 1 1
Aciduliprofundum_boonei_T469 1 1

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Strains
Genome     Number   Proteins
Hordeum_vulgare_22   (Domesticated barley)   1 1
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   1 1
Chroococcidiopsis_thermalis_PCC_7203 1 1
Chamaesiphon_minutus_PCC_6605 1 1
Synechocystis_sp._PCC_6803_substr._PCC-P 1 1
Synechocystis_sp._PCC_6803_substr._PCC-N 1 1
Synechocystis_sp._PCC_6803_substr._GT-I 1 1
Synechocystis_sp._PCC_6803 1 1
Cyanobium_gracile_PCC_6307 1 1
Dactylococcopsis_salina_PCC_8305 1 1
Synechococcus_sp._JA-2-3B'a(2-13) 1 1
Synechococcus_sp._JA-3-3Ab 1 1
Synechococcus_sp._CC9902 1 1
Synechococcus_sp._RCC307 1 1
Synechococcus_sp._CC9605 1 1
Synechococcus_sp._WH_8102 1 1
Synechococcus_sp._WH_7803 1 1
Synechococcus_sp._PCC_7002 1 1
Synechococcus_elongatus_PCC_6301 1 1
Prochlorococcus_marinus_str._NATL1A 1 1
Prochlorococcus_marinus_str._MIT_9301 1 1
Prochlorococcus_marinus_str._AS9601 1 1
Prochlorococcus_marinus_subsp._marinus_str._CCMP1375 1 1
Prochlorococcus_marinus_subsp._pastoris_str._CCMP1986 1 1
Prochlorococcus_marinus_str._MIT_9215 1 1
Prochlorococcus_marinus_str._MIT_9211 1 1
Prochlorococcus_marinus_str._MIT_9313 1 1
Prochlorococcus_marinus_str._MIT_9312 1 1
Prochlorococcus_marinus_str._MIT_9303 1 1
Prochlorococcus_marinus_str._NATL2A 1 1
Crinalium_epipsammum_PCC_9333 1 1
Oscillatoria_nigro-viridis_PCC_7112 1 1
Oscillatoria_acuminata_PCC_6304 1 1
Arthrospira_platensis_NIES-39 2 2
Cyanothece_sp._PCC_7822 2 2
Cyanothece_sp._PCC_7425 1 1
Cyanothece_sp._PCC_7424 2 2
Cyanothece_sp._ATCC_51142 1 1
Cyanothece_sp._PCC_8801 2 2
Cyanobacterium_aponinum_PCC_10605 1 1
Cyanobacterium_stanieri_PCC_7202 1 1
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 1 1
Pleurocapsa_minor_Pleurocapsa_sp._PCC_7327 2 2
Stanieria_cyanosphaera_PCC_7437 2 2
Calothrix_parietina_Calothrix_sp._PCC_6303 2 2
Cylindrospermum_stagnale_PCC_7417 1 1
Anabaena_cylindrica_PCC_7122 1 1
Thermus_oshimai_JL-2 1 1
Sulfobacillus_acidophilus_TPY 2 2
Thermacetogenium_phaeum_DSM_12270 1 1
Exiguobacterium_antarcticum_B7 1 1
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_Tc-4-1 1 1
Thermobacillus_composti_KWC4 1 1
Paenibacillus_sp._Y412MC10 2 2
Paenibacillus_mucilaginosus_KNP414 2 2
Paenibacillus_mucilaginosus_K02 1 1
Paenibacillus_larvae_subsp._larvae_DSM_25430 1 1
Paenibacillus_polymyxa_CR1 1 1
Paenibacillus_polymyxa_SC2 1 1
Paenibacillus_polymyxa_E681 1 1
Geobacillus_sp._C56-T3 1 1
Geobacillus_sp._Y4.1MC1 1 1
Geobacillus_sp._Y412MC52 1 1
Geobacillus_sp._Y412MC61 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_sequencing 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5033 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_AS43.3 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_YAU_B9601-Y2 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5113 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5036 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_CAU_B946 1 1
Bacillus_amyloliquefaciens_LFB112 1 1
Bacillus_amyloliquefaciens_CC178 1 1
Bacillus_amyloliquefaciens_Y2 1 1
Bacillus_amyloliquefaciens_IT-45 1 1
Bacillus_amyloliquefaciens_XH7 1 1
Bacillus_amyloliquefaciens_LL3 1 1
Bacillus_amyloliquefaciens_TA208 1 1
Bacillus_amyloliquefaciens_DSM_7 1 1
Bacillus_licheniformis_9945A 1 1
Bacillus_subtilis_PY79 1 1
Bacillus_subtilis_XF-1 1 1
Bacillus_subtilis_QB928 1 1
Bacillus_subtilis_BSn5 1 1
Bacillus_subtilis_subsp._subtilis_str._BAB-1 1 1
Bacillus_subtilis_subsp._subtilis_str._BSP1 1 1
Bacillus_subtilis_subsp._subtilis_str._RO-NN-1 1 1
Bacillus_subtilis_subsp._subtilis_6051-HGW 1 1
Bacillus_subtilis_subsp._spizizenii_TU-B-10 1 1
Bacillus_subtilis_subsp._spizizenii_str._W23 1 1
Bacillus_subtilis_subsp._natto_BEST195 1 1
Bacillus_licheniformis_DSM_13_=_ATCC_14580 1 1
Bacillus_infantis_NRRL_B-14911 1 1
Bacillus_cereus_subsp._cytotoxis_NVH_391-98 1 1
Bacillus_toyonensis_BCT-7112 1 1
Bacillus_thuringiensis_HD-771 1 1
Bacillus_thuringiensis_HD-789 1 1
Bacillus_thuringiensis_MC28 1 1
Bacillus_thuringiensis_serovar_chinensis_CT-43 1 1
Bacillus_thuringiensis_YBT-1518 1 1
Bacillus_thuringiensis_Bt407 1 1
Bacillus_thuringiensis_serovar_konkukian_str._97-27 1 1
Bacillus_thuringiensis_serovar_kurstaki_str._HD73 1 1
Bacillus_thuringiensis_BMB171 1 1
Bacillus_thuringiensis_serovar_finitimus_YBT-020 1 1
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 1 1
Bacillus_cereus_FRI-35 1 1
Bacillus_cereus_biovar_anthracis_str._CI 1 1
Bacillus_cereus_AH820 1 1
Bacillus_cereus_AH187 1 1
Bacillus_cereus_B4264 1 1
Bacillus_cereus_G9842 1 1
Bacillus_cereus_Q1 1 1
Bacillus_cereus_F837/76 1 1
Bacillus_cereus_NC7401 1 1
Bacillus_cereus_E33L 1 1
Bacillus_cereus_ATCC_14579 1 1
Bacillus_cereus_ATCC_10987 1 1
Bacillus_anthracis_str._H9401 1 1
Bacillus_anthracis_str._CDC_684 1 1
Bacillus_anthracis_str._'Ames_Ancestor' 1 1
Bacillus_anthracis_str._Sterne 1 1
Bacillus_anthracis_str._Ames 1 1
Bacillus_megaterium_WSH-002 1 1
Bacillus_megaterium_QM_B1551 1 1
Chlorobium_phaeobacteroides_BS1 1 1
Rhodothermus_marinus_SG0.5JP17-172 1 1
Echinicola_vietnamensis_DSM_17526 1 1
Porphyromonas_gingivalis_W83 1 1
Leptospirillum_ferriphilum_ML-04 2 2
Acidithiobacillus_ferrooxidans_ATCC_23270 4 4
Desulfovibrio_hydrothermalis_AM13_=_DSM_14728 2 2
Burkholderia_phenoliruptrix_BR3459a 1 1
Pandoraea_pnomenusa_3kgm 1 1
Burkholderia_sp._YI23 2 2
Burkholderia_sp._CCGE1003 1 1
Burkholderia_sp._CCGE1001 1 1
Burkholderia_ambifaria_MC40-6 1 1
Variovorax_paradoxus_B4 3 3
Variovorax_paradoxus_EPS 2 2
Bordetella_bronchiseptica_MO149 1 1
Bordetella_bronchiseptica_253 1 1
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 1 1
Nitrosomonas_sp._AL212 2 2
Sulfuricella_denitrificans_skB26 2 2
Octadecabacter_antarcticus_307 1 1
Rhodobacter_sphaeroides_KD131 3 3
Rhodobacter_sphaeroides_ATCC_17025 3 3
Rhodobacter_sphaeroides_2.4.1 2 2
Magnetospirillum_gryphiswaldense_MSR-1_v2 1 1
Rhodospirillum_rubrum_ATCC_11170 2 2
Sinorhizobium_fredii_USDA_257 2 2
Sinorhizobium_fredii_HH103 2 2
Sinorhizobium_meliloti_2011 2 2
Sinorhizobium_meliloti_GR4 2 2
Sinorhizobium_meliloti_Rm41 2 2
Sinorhizobium_meliloti_SM11 2 2
Sinorhizobium_meliloti_BL225C 2 2
Sinorhizobium_meliloti_1021 2 2
Rhizobium_etli_CFN_42 1 1
Rhizobium_etli_bv._mimosae_str._Mim1 1 1
Rhizobium_tropici_CIAT_899 1 1
Rhizobium_leguminosarum_bv._trifolii_WSM2304 1 1
Rhizobium_leguminosarum_bv._trifolii_WSM1325 1 1
Mesorhizobium_australicum_WSM2073 2 2
Oligotropha_carboxidovorans_OM5 1 1
Oligotropha_carboxidovorans_OM5 1 1
Rhodopseudomonas_palustris_DX-1 4 4
Rhodopseudomonas_palustris_TIE-1 4 4
Rhodopseudomonas_palustris_HaA2 4 4
Rhodopseudomonas_palustris_BisB5 5 5
Rhodopseudomonas_palustris_BisB18 4 4
Rhodopseudomonas_palustris_CGA009 4 4
Bradyrhizobium_sp._S23321 1 1
Bradyrhizobium_sp._BTAi1 3 3
Bradyrhizobium_oligotrophicum_S58 2 2
Bradyrhizobium_japonicum_USDA_6 2 2
Thioalkalivibrio_nitratireducens_DSM_14787 1 1
Thioflavicoccus_mobilis_8321 5 5
Pseudomonas_putida_ND6 1 1
Methanomethylovorans_hollandica_DSM_15978 2 2
Methanolobus_psychrophilus_R15 1 1
Methanosarcina_mazei_Tuc01 1 1
Methanoregula_formicica_Methanoregula_formicicum_SMSP 1 1
Archaeoglobus_sulfaticallidus_PM70-1 1 1
Thermococcus_sp._AM4 1 1
Thermococcus_sp._CL1 1 1
Thermococcus_litoralis_DSM_5473 1 1
Pyrococcus_sp._NA2 1 1
Pyrococcus_furiosus_DSM_3638 1 1
Candidatus_Methanomethylophilus_alvus_Mx1201 1 1
Candidatus_Methanomassiliicoccus_intestinalis_Issoire-Mx1 1 1

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Longest transcript per gene
Genome     Number   Proteins
Pteropus_vampyrus_69_1   (Large flying fox)   1 1
Arabidopsis_thaliana_10   (Thale cress)   3 3

Others
Genome     Number   Proteins
Lotus_japonicus__(Early_assembly) 19 19
Malus_x_domestica_(Duplicate)   (Apple)   3 3
Ricinus_communis__(Early_assembly)   (Castor bean)   7 6
Nicotiana_benthamiana_0.4.4_(Early_draft) 7 6
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   10 10
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   10 10
Guillardia_theta_(nucleomorph) 1 1
NCBI_plasmid_sequences_(Plasmids) 42 42
Uniprot_2018_03_genome 137160 136891
PDB_chains_(SCOP_1.75)_(PDB) 27 27
STRING_v9.0.5_(STRING) 301 301
Protein_Data_Bank_(all_PDB_sequenc) 567 567
TargetDB__(Targets) 17 17
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 1208 1208
NCBI_2017_08_genome 6552 6550

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