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Domain combinations for Glycosyl hydrolases family 6, cellulases superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Glycosyl hydrolases family 6, cellulases domain in that genome.

Complete genomes
Genome     Number   Proteins
Oikopleura_dioica 3 3
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   3 3
Ciona_intestinalis_76   (Vase tunicate)   2 2
Sphaerobolus_stellatus_v1.0 5 5
Serpula_lacrymans_var._lacrymans_S7.9_ 1 1
Coniophora_puteana 2 2
Hydnomerulius_pinastri_v2.0 1 1
Coprinopsis_cinerea_okayama7_130_v3 5 5
Pleurotus_ostreatus_   (Oyster mushroom)   3 3
Amanita_thiersii_Skay4041_v1.0 1 1
Galerina_marginata_v1.0 3 3
Agaricus_bisporus_var._bisporus_ 1 1
Schizophyllum_commune_ 1 1
Stereum_hirsutum_FP-91666_SS1__v1.0 1 1
Heterobasidion_annosum_ 1 1
Punctularia_strigosozonata_v1.0 1 1
Sebacina_vermifera_MAFF_305830_v1.0 5 5
Fomitiporia_mediterranea_v1.0 2 2
Tulasnella_calospora_AL13/4D_v1.0 7 7
Phanerochaete_chrysosporium_RP-78_2.1 1 1
Dichomitus_squalens 1 1
Trametes_versicolor_v1.0 1 1
Daldinia_eschscholzii_EC12_v1.0 3 3
Apiospora_montagnei_NRRL_25634_v1.0 4 4
Magnaporthe_poae_ATCC_64411_22 3 3
Magnaporthe_grisea_70-15_ 3 3
Podospora_anserina_ 4 4
Sporotrichum_thermophile_ATCC_42464_ 3 3
Thielavia_terrestris_NRRL_8126_ 2 2
Chaetomium_globosum_CBS_148.51_ 4 4
Neurospora_tetrasperma_ 3 3
Neurospora_discreta_FGSC_8579_ 3 3
Neurospora_crassa_OR74A_ 3 3
Cryphonectria_parasitica_   (Chestnut blight fungus)   2 2
Verticillium_albo-atrum_VaMs.102_ 4 4
Verticillium_dahliae_VdLs.17_ 4 4
Acremonium_alcalophilumv_1.0 5 5
Glomerella_graminicola_22 4 4
Fusarium_graminearum_ 1 1
Nectria_haematococca_mpVI_ 1 1
Fusarium_oxysporum_f._sp._lycopersici_4286_ 1 1
Fusarium_verticillioides_7600_ 1 1
Trichoderma_asperellum_CBS_433.97_v1.0 1 1
Trichoderma_atroviride_ 1 1
Trichoderma_citrinoviride_v1.0 1 1
Trichoderma_reesei_1.2 1 1
Trichoderma_virens_Gv29-8_ 1 1
Trichoderma_longibrachiatum_ATCC_18648_v1.0 1 1
Trichoderma_harzianum_CBS_226.95_v1.0 1 1
Botrytis_cinerea_B05.10_ 1 1
Sclerotinia_sclerotiorum_ 1 1
Didymella_exigua_CBS_183.55_v1.0 3 3
Leptosphaeria_maculans_22 3 3
Setosphaeria_turcica_v1.0 3 3
Cochliobolus_miyabeanus_ATCC_44560_v1.0 3 3
Cochliobolus_victoriae_FI3_v1.0 3 3
Cochliobolus_carbonum_26-R-13_v1.0 3 3
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   3 3
Alternaria_brassicicola_ 3 3
Cochliobolus_lunatus_m118_v2.0 3 3
Pyrenophora_teres_f._teres_22 3 3
Pyrenophora_tritici-repentis_ 3 3
Stagonospora_nodorum_ 4 4
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 2 2
Penicillium_chrysogenum_Wisconsin_54-1255_ 1 1
Penicillium_chrysogenum_v1.0 1 1
Aspergillus_acidus_v1.0 2 2
Aspergillus_fumigatus_Af293 1 1
Aspergillus_brasiliensis_v1.0 2 2
Aspergillus_nidulans_FGSC_A4_ 2 2
Aspergillus_sydowii_v1.0 1 1
Aspergillus_versicolor_v1.0 1 1
Aspergillus_carbonarius_ITEM_5010_ 1 1
Neosartorya_fischeri_NRRL_181_ 2 2
Aspergillus_terreus_NIH2624_ 2 2
Aspergillus_tubingensis_v1.0 2 2
Aspergillus_wentii_v1.0 1 1
Aspergillus_oryzae_RIB40_ 1 1
Aspergillus_niger_22 2 2
Aspergillus_niger_ATCC_1015_ 1 1
Aspergillus_flavus_NRRL3357_ 1 1
Aspergillus_clavatus_NRRL_1_ 2 2
Penicillium_marneffei_ATCC_18224_ 1 1
Aureococcus_anophagefferens_ 1 1
Albugo_laibachii_22 2 2
Pythium_iwayamai_DAOM_BR242034_22 4 4
Pythium_arrhenomanes_ATCC_12531_22 12 11
Pythium_ultimum_v1.7-2 6 6
Pythium_aphanidermatum_DAOM_BR444_22 2 2
Pythium_irregulare_DAOM_BR486_22 7 7
Pythium_vexans_DAOM_BR484_22 3 3
Phytophthora_ramorum_1.1   (Sudden oak death agent)   8 8
Phytophthora_sojae_1.1 7 7
Phytophthora_infestans_T30-4_ 7 7
Phytophthora_capsici_ 5 5
Hyaloperonospora_arabidopsidis_22 4 4
Symbiodinium_minutum_clade_B1_v1.2 3 2
Conexibacter_woesei_DSM_14684 2 2
Thermobispora_bispora_DSM_43833 2 2
Acidothermus_cellulolyticus_11B 2 2
Geodermatophilus_obscurus_DSM_43160 1 1
Kineococcus_radiotolerans_SRS30216 1 1
Catenulispora_acidiphila_DSM_44928 4 4
Stackebrandtia_nassauensis_DSM_44728 2 2
Frankia_symbiont_of_Datisca_glomerata 3 3
Frankia_sp._EAN1pec 2 2
Frankia_alni_ACN14a 2 2
Thermobifida_fusca_YX 2 2
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 3 3
Thermomonospora_curvata_DSM_43183 1 1
Streptosporangium_roseum_DSM_43021 3 3
Kitasatospora_setae_KM-6054 3 3
Streptomyces_coelicolor_A3(2) 3 3
Streptomyces_sp._PAMC26508 2 2
Streptomyces_flavogriseus_ATCC_33331 2 2
Streptomyces_sp._SirexAA-E 1 1
Streptomyces_griseus_subsp._griseus_NBRC_13350 4 4
Streptomyces_bingchenggensis_BCW-1 9 8
Streptomyces_violaceusniger_Tu_4113 7 6
Streptomyces_avermitilis_MA-4680 4 4
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1 1
Streptomyces_scabiei_87.22 4 4
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 3 3
Actinosynnema_mirum_DSM_43827 3 3
Saccharopolyspora_erythraea_NRRL_2338 1 1
Amycolatopsis_mediterranei_U32 2 2
Nocardioides_sp._JS614 3 3
Salinispora_arenicola_CNS-205 1 1
Salinispora_tropica_CNB-440 1 1
Verrucosispora_maris_AB-18-032 2 2
Micromonospora_sp._L5 2 2
Micromonospora_aurantiaca_ATCC_27029 2 2
Actinoplanes_sp._N902-109 3 3
Actinoplanes_sp._SE50/110 4 4
Actinoplanes_missouriensis_431 5 5
Segniliparus_rotundus_DSM_44985 1 1
Gordonia_bronchialis_DSM_43247 1 1
Mycobacterium_massiliense_str._GO_06 1 1
Mycobacterium_abscessus_ATCC_19977 1 1
Mycobacterium_sp._JLS 1 1
Mycobacterium_intracellulare_ATCC_13950 1 1
Mycobacterium_avium_104 1 1
Mycobacterium_vanbaalenii_PYR-1 1 1
Mycobacterium_canettii_CIPT_140010059 1 1
Mycobacterium_africanum_GM041182 1 1
Mycobacterium_tuberculosis_KZN_1435 1 1
Mycobacterium_tuberculosis 1 1
Mycobacterium_bovis_BCG_str._Pasteur_1173P2 1 1
Mycobacterium_rhodesiae_NBB3 2 2
Mycobacterium_gilvum_PYR-GCK 1 1
Mycobacterium_chubuense_NBB4 1 1
Mycobacterium_marinum_M 1 1
Mycobacterium_smegmatis_str._MC2_155 1 1
Sanguibacter_keddieii_DSM_10542 1 1
Microbacterium_testaceum_StLB037 1 1
Jonesia_denitrificans_DSM_20603 2 2
Brachybacterium_faecium_DSM_4810 1 1
Isoptericola_variabilis_225 1 1
Xylanimonas_cellulosilytica_DSM_15894 3 3
Cellulomonas_flavigena_DSM_20109 3 3
Cellulomonas_fimi_ATCC_484 4 4
[Cellvibrio]_gilvus_ATCC_13127 4 4
Arthrobacter_chlorophenolicus_A6 1 1
Herpetosiphon_aurantiacus_DSM_785 2 1
Paenibacillus_terrae_HPL-003 1 1
Paenibacillus_mucilaginosus_3016 1 1
Paenibacillus_polymyxa_M1 1 1
Capnocytophaga_ochracea_DSM_7271 3 3
Sorangium_cellulosum_'So_ce_56' 1 1
Stigmatella_aurantiaca_DW4/3-1 2 2
Corallococcus_coralloides_DSM_2259 1 1
Myxococcus_xanthus_DK_1622 1 1
Myxococcus_fulvus_HW-1 1 1
Ralstonia_solanacearum_CFBP2957 1 1
Novosphingobium_sp._PP1Y 1 1
Saccharophagus_degradans_2-40 1 1
Teredinibacter_turnerae_T7901 3 3
Cellvibrio_japonicus_Ueda107 1 1
Shewanella_violacea_DSS12 2 2
Hahella_chejuensis_KCTC_2396 1 1
Xylella_fastidiosa_M23 1 1
Xanthomonas_albilineans_GPE_PC73 1 1
Xanthomonas_oryzae_pv._oryzae_PXO99A 1 1
Xanthomonas_campestris_pv._campestris_str._B100 2 2
Providencia_stuartii_MRSN_2154 1 1

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Strains
Genome     Number   Proteins
Aspergillus_fumigatus_A1163_ 1 1
Nocardiopsis_alba_ATCC_BAA-2165 1 1
Streptomyces_albus_J1074 3 3
Streptomyces_rapamycinicus_NRRL_5491 8 7
Streptomyces_davawensis_JCM_4913 4 4
Streptomyces_fulvissimus_DSM_40593 5 5
Streptomyces_venezuelae_ATCC_10712 4 4
Streptomyces_collinus_Tu_365 1 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 3 3
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 3 3
Amycolatopsis_mediterranei_RB 2 2
Amycolatopsis_mediterranei_S699 2 2
Amycolatopsis_mediterranei_S699 2 2
Amycolatopsis_orientalis_HCCB10007 1 1
Actinoplanes_friuliensis_DSM_7358 3 3
Mycobacterium_sp._MOTT36Y 1 1
Mycobacterium_sp._JDM601 1 1
Mycobacterium_abscessus_subsp._bolletii_50594 1 1
Mycobacterium_liflandii_128FXT 1 1
Mycobacterium_sp._KMS 1 1
Mycobacterium_sp._MCS 1 1
Mycobacterium_yongonense_05-1390 1 1
Mycobacterium_intracellulare_MOTT-64 1 1
Mycobacterium_indicus_pranii_MTCC_9506 1 1
Mycobacterium_intracellulare_MOTT-02 1 1
Mycobacterium_avium_subsp._paratuberculosis_MAP4 1 1
Mycobacterium_avium_subsp._paratuberculosis_K-10 1 1
Mycobacterium_canettii_CIPT_140070017 1 1
Mycobacterium_canettii_CIPT_140060008 1 1
Mycobacterium_canettii_CIPT_140070008 1 1
Mycobacterium_canettii_CIPT_140070010 1 1
Mycobacterium_tuberculosis_EAI5/NITR206 1 1
Mycobacterium_tuberculosis_EAI5 1 1
Mycobacterium_tuberculosis_CAS/NITR204 2 2
Mycobacterium_tuberculosis_str._Beijing/NITR203 1 1
Mycobacterium_tuberculosis_UT205 1 1
Mycobacterium_tuberculosis_RGTB423 1 1
Mycobacterium_tuberculosis_RGTB327 1 1
Mycobacterium_tuberculosis_CTRI-2 1 1
Mycobacterium_tuberculosis_str._Erdman_=_ATCC_35801 1 1
Mycobacterium_tuberculosis_KZN_605 1 1
Mycobacterium_tuberculosis_KZN_4207 1 1
Mycobacterium_tuberculosis_CCDC5180 1 1
Mycobacterium_tuberculosis_CCDC5079 1 1
Mycobacterium_tuberculosis_CCDC5079 1 1
Mycobacterium_tuberculosis_H37Ra 1 1
Mycobacterium_tuberculosis_str._Haarlem/NITR202 1 1
Mycobacterium_tuberculosis_str._Haarlem 1 1
Mycobacterium_tuberculosis_F11 1 1
Mycobacterium_tuberculosis_H37Rv 1 1
Mycobacterium_tuberculosis_CDC1551 1 1
Mycobacterium_bovis_AF2122/97 1 1
Mycobacterium_bovis_BCG_str._Korea_1168P 1 1
Mycobacterium_bovis_BCG_str._Mexico 1 1
Mycobacterium_bovis_BCG_str._Tokyo_172 1 1
Mycobacterium_gilvum_Spyr1 1 1
Mycobacterium_smegmatis_str._MC2_155 1 1
Mycobacterium_kansasii_ATCC_12478 1 1
Paenibacillus_mucilaginosus_KNP414 1 1
Paenibacillus_mucilaginosus_K02 1 1
Paenibacillus_polymyxa_CR1 1 1
Paenibacillus_polymyxa_SC2 1 1
Paenibacillus_polymyxa_E681 1 1
Sorangium_cellulosum_So0157-2 1 1
Myxococcus_stipitatus_DSM_14675 1 1
Ralstonia_solanacearum_FQY_4 1 1
Ralstonia_solanacearum_Po82 1 1
Ralstonia_solanacearum_GMI1000 1 1
Xylella_fastidiosa_M12 1 1
Xylella_fastidiosa_Temecula1 1 1
Xylella_fastidiosa_9a5c 1 1
Xanthomonas_oryzae_pv._oryzicola_BLS256 3 3
Xanthomonas_oryzae_pv._oryzae_MAFF_311018 1 1
Xanthomonas_oryzae_pv._oryzae_KACC_10331 1 1
Xanthomonas_campestris_pv._raphani_756C 1 1
Xanthomonas_campestris_pv._campestris_str._8004 2 2
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 2 2

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Longest transcript per gene
Genome     Number   Proteins
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   1 1
Ciona_intestinalis_69   (Vase tunicate)   2 2

Others
Genome     Number   Proteins
Moniliophthora_perniciosa_FA553__(Genome_survey) 3 3
Mycobacterium_tuberculosis_H37Rv_(Duplicate_of_ex) 1 1
NCBI_plasmid_sequences_(Plasmids) 6 6
TargetDB__(Targets) 2 2
PDB_chains_(SCOP_1.75)_(PDB) 14 14
Protein_Data_Bank_(all_PDB_sequenc) 79 79
STRING_v9.0.5_(STRING) 132 131
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 204 204
Uniprot_2018_03_genome 4053 4018
NCBI_2017_08_genome 12581 12564

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