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Domain combinations for Outer arm dynein light chain 1 superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Outer arm dynein light chain 1 domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   33 33
Pan_troglodytes_76_2.1.4   (Chimpanzee)   7 7
Gorilla_gorilla_76_3.1   (Western gorilla)   10 10
Pongo_abelii_76_2   (Sumatran orangutan)   10 10
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   9 9
Papio_anubis_76   (Olive baboon)   8 7
Macaca_mulatta_76_1   (Rhesus monkey)   9 9
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   15 15
Otolemur_garnettii_76_3   (Small-eared galago)   8 7
Microcebus_murinus_76_1   (Gray mouse lemur)   6 6
Rattus_norvegicus_76_5.0   (Norway rat)   7 5
Mus_musculus_76_38   (House mouse)   28 25
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   6 6
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   5 4
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   3 3
Cavia_porcellus_76_3   (Domestic guinea pig)   7 7
Oryctolagus_cuniculus_76_2   (Rabbit)   7 6
Ochotona_princeps_76   (American pika)   9 9
Tupaia_belangeri_76   (Northern tree shrew)   5 5
Sus_scrofa_76_10.2   (Pig)   9 9
Bos_taurus_76_3.1   (Cattle)   10 8
Ovis_aries_76_3.1   (Sheep)   13 12
Vicugna_pacos_76_1   (Alpaca)   2 2
Tursiops_truncatus_76_1   (Bottlenose dolphin)   9 9
Mustela_putorius_furo_76_1.0   (Domestic ferret)   9 9
Ailuropoda_melanoleuca_76_1   (Giant panda)   6 6
Canis_familiaris_76_3.1   (Dog)   14 14
Felis_catus_76_6.2   (Domestic cat)   8 7
Equus_caballus_76_2   (Horse)   7 7
Myotis_lucifugus_76_2.0   (Little brown bat)   10 9
Pteropus_vampyrus_76_1   (Large flying fox)   12 12
Sorex_araneus_76_1   (European shrew)   5 5
Erinaceus_europaeus_76   (Western European hedgehog)   8 8
Procavia_capensis_76_1   (Cape rock hyrax)   7 7
Loxodonta_africana_76_3   (African savanna elephant)   14 14
Echinops_telfairi_76   (Small Madagascar hedgehog)   8 7
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   9 9
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   9 9
Macropus_eugenii_76_1.0   (Tammar wallaby)   9 9
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   11 10
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   11 11
Ornithorhynchus_anatinus_76_5   (Platypus)   9 9
Saccoglossus_kowalevskii_v3.0 21 19
Petromyzon_marinus_76_7.0   (Sea lamprey)   6 6
Meleagris_gallopavo_76_2   (Turkey)   12 10
Gallus_gallus_76_4   (Chicken)   7 7
Anas_platyrhynchos_76_1.0   (Mallard)   10 10
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   9 9
Ficedula_albicollis_76_1.0   (Collared flycatcher)   6 6
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   12 12
Anolis_carolinensis_76_2.0   (Green anole)   9 8
Xenopus_laevis_   (African clawed frog)   9 9
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   12 10
Latimeria_chalumnae_76_1   (Coelacanth)   11 10
Lepisosteus_oculatus_76   (Spotted gar)   10 9
Gadus_morhua_76_1   (Atlantic cod)   9 9
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   10 10
Takifugu_rubripes_76_4   (Torafugu)   18 15
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   6 6
Oryzias_latipes_76_1   (Japanese medaka)   8 8
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   10 10
Poecilia_formosa_76   (Amazon molly)   8 8
Oreochromis_niloticus_76_1.0   (Nile tilapia)   14 11
Astyanax_mexicanus_76   (Mexican tetra)   13 12
Danio_rerio_76_9   (Zebrafish)   16 16
Oikopleura_dioica 8 8
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   11 11
Ciona_intestinalis_76   (Vase tunicate)   13 13
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   12 12
Adineta_vaga 22 20
Octopus_bimaculoides_280 13 13
Crassostrea_gigas_22   (Pacific oyster)   13 13
Lottia_gigantea_   (Owl limpet)   11 11
Helobdella_robusta_ 8 8
Capitella_sp._I_ 23 23
Danaus_plexippus_OGS1.0   (Monarch butterfly)   8 8
Heliconius_melpomene_   (Postman butterfly)   6 6
Bombyx_mori_   (Domestic silkworm)   8 8
Nasonia_vitripennis_   (Jewel wasp)   4 4
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   15 15
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   8 8
Linepithema_humile_v1.1   (Argentine ant)   7 7
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   7 7
Solenopsis_invicta_v.2.2.3   (Red fire ant)   7 7
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   8 8
Atta_cephalotes_v1.1 8 8
Camponotus_floridanus_v3.3   (Florida carpenter ant)   9 9
Lucilia_cuprina   (Australian sheep blowfly)   9 9
Drosophila_grimshawi_1.3 7 7
Drosophila_willistoni_1.3 11 11
Drosophila_pseudoobscura_2.13 6 6
Drosophila_persimilis_1.3 6 6
Drosophila_suzukii 8 8
Drosophila_yakuba_1.3 7 7
Drosophila_simulans_1.3 9 9
Drosophila_sechellia_1.3 10 10
Drosophila_melanogaster_76_5   (Fruit fly)   15 15
Drosophila_erecta_1.3 7 7
Drosophila_ananassae_1.3 4 4
Drosophila_virilis_1.2 5 5
Drosophila_mojavensis_1.3 6 6
Megaselia_scalaris_22 4 4
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   13 13
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   16 16
Anopheles_darlingi_22   (American malaria mosquito)   5 5
Anopheles_gambiae_49_3j   (African malaria mosquito)   11 11
Tribolium_castaneum_3.0   (Red flour beetle)   8 8
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   6 6
Acyrthosiphon_pisum_   (Pea aphid)   5 5
Rhodnius_prolixus_22 4 4
Daphnia_pulex_   (Common water flea)   8 8
Strigamia_maritima_22 15 13
Sarcoptes_scabiei 2 2
Tetranychus_urticae_   (Two-spotted spider mite)   4 4
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   6 6
Pristionchus_pacificus_ 3 3
Meloidogyne_incognita_   (Southern root-knot nematode)   1 1
Meloidogyne_hapla_ 3 3
Onchocerca_volvulus_22 3 3
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   3 3
Caenorhabditis_japonica_ 9 9
Caenorhabditis_brenneri_ 6 6
Caenorhabditis_remanei_ 3 3
Caenorhabditis_elegans_76_235   (Roundworm)   3 3
Caenorhabditis_briggsae_2 3 3
Trichinella_spiralis_22 2 2
Hymenolepis_microstoma_ 7 7
Echinococcus_multilocularis_ 6 6
Echinococcus_granulosus_ 7 7
Taenia_solium_   (Pork tapeworm)   11 11
Schistosoma_mansoni_ 8 8
Mnemiopsis_leidyi   (Sea walnut)   7 7
Acropora_digitifera_v1.0 8 8
Nematostella_vectensis_1.0   (Starlet sea anemone)   16 16
Hydra_vulgaris 7 6
Amphimedon_queenslandica 15 12
Trichoplax_adhaerens_ 11 9
Proterospongia_sp._ATCC_50818_ 10 9
Monosiga_brevicollis_ 11 9
Sphaeroforma_arctica_JP610_ 4 4
Capsaspora_owczarzaki_ATCC_30864_ 3 3
Conidiobolus_coronatus_NRRL28638_v1.0 3 3
Mortierella_verticillata_NRRL_6337_ 7 7
Phycomyces_blakesleeanus_ 4 4
Rhizopus_oryzae_RA_99-880_ 1 1
Mucor_circinelloides_ 1 1
Rhizomucor_miehei_CAU432_ 2 2
Malassezia_globosa_CBS_7966_ 2 2
Sporisorium_reilianum_22 1 1
Mixia_osmundae_IAM_14324_v1.0 2 2
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 4 4
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 4 4
Melampsora_laricis-populina_ 2 2
Rhodotorula_graminis_WP1_v1.0 1 1
Sporobolomyces_roseus_IAM_13481_ 2 2
Microbotryum_violaceum_22 3 3
Sphaerobolus_stellatus_v1.0 2 2
Piloderma_croceum_F_1598_v1.0 3 3
Serpula_lacrymans_var._lacrymans_S7.9_ 2 2
Coniophora_puteana 3 3
Hydnomerulius_pinastri_v2.0 3 3
Paxillus_rubicundulus_Ve08.2h10_v1.0 4 4
Pisolithus_microcarpus_441_v1.0 1 1
Pisolithus_tinctorius_Marx_270_v1.0 5 5
Scleroderma_citrinum_Foug_A_v1.0 4 4
Coprinopsis_cinerea_okayama7_130_v3 5 5
Pleurotus_ostreatus_   (Oyster mushroom)   1 1
Amanita_thiersii_Skay4041_v1.0 2 2
Amanita_muscaria_Koide_v1.0   (Fly agaric)   4 4
Galerina_marginata_v1.0 4 4
Hebeloma_cylindrosporum_h7_v2.0 3 3
Laccaria_bicolor_S238N-H82_ 4 4
Agaricus_bisporus_var._bisporus_ 2 2
Schizophyllum_commune_ 3 3
Stereum_hirsutum_FP-91666_SS1__v1.0 6 6
Heterobasidion_annosum_ 1 1
Gloeophyllum_trabeumv1.0 3 3
Punctularia_strigosozonata_v1.0 3 3
Sebacina_vermifera_MAFF_305830_v1.0 3 3
Fomitiporia_mediterranea_v1.0 1 1
Tulasnella_calospora_AL13/4D_v1.0 2 2
Postia_placenta_ 4 4
Wolfiporia_cocos_MD-104_SS10__v1.0 1 1
Fomitopsis_pinicolav1.0 2 2
Fomitopsis_pinicola_FP-58527_SS1_v3.0 2 2
Phanerochaete_chrysosporium_RP-78_2.1 3 3
Dichomitus_squalens 2 2
Trametes_versicolor_v1.0 3 3
Daldinia_eschscholzii_EC12_v1.0 3 3
Apiospora_montagnei_NRRL_25634_v1.0 2 2
Magnaporthe_poae_ATCC_64411_22 3 3
Magnaporthe_grisea_70-15_ 5 5
Podospora_anserina_ 6 6
Sporotrichum_thermophile_ATCC_42464_ 1 1
Thielavia_terrestris_NRRL_8126_ 3 3
Chaetomium_globosum_CBS_148.51_ 1 1
Neurospora_tetrasperma_ 3 3
Neurospora_discreta_FGSC_8579_ 3 3
Neurospora_crassa_OR74A_ 2 2
Cryphonectria_parasitica_   (Chestnut blight fungus)   3 3
Verticillium_albo-atrum_VaMs.102_ 1 1
Verticillium_dahliae_VdLs.17_ 2 2
Acremonium_alcalophilumv_1.0 1 1
Glomerella_graminicola_22 3 3
Fusarium_graminearum_ 3 3
Nectria_haematococca_mpVI_ 4 4
Fusarium_oxysporum_f._sp._lycopersici_4286_ 4 4
Fusarium_verticillioides_7600_ 3 3
Trichoderma_asperellum_CBS_433.97_v1.0 2 2
Trichoderma_atroviride_ 2 2
Trichoderma_citrinoviride_v1.0 1 1
Trichoderma_reesei_1.2 1 1
Trichoderma_virens_Gv29-8_ 1 1
Trichoderma_longibrachiatum_ATCC_18648_v1.0 1 1
Trichoderma_harzianum_CBS_226.95_v1.0 2 2
Amorphotheca_resinae_v1.0   (Creosote fungus)   2 2
Sclerotinia_sclerotiorum_ 2 2
Blumeria_graminis_22 2 2
Didymella_exigua_CBS_183.55_v1.0 4 4
Leptosphaeria_maculans_22 3 3
Setosphaeria_turcica_v1.0 3 3
Cochliobolus_miyabeanus_ATCC_44560_v1.0 4 4
Cochliobolus_victoriae_FI3_v1.0 3 3
Cochliobolus_carbonum_26-R-13_v1.0 4 4
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   2 2
Alternaria_brassicicola_ 2 2
Cochliobolus_lunatus_m118_v2.0 2 2
Pyrenophora_teres_f._teres_22 4 4
Pyrenophora_tritici-repentis_ 4 4
Stagonospora_nodorum_ 4 4
Mycosphaerella_graminicola_IPO323_ 3 3
Zasmidium_cellare_ATCC_36951_v1.0 5 5
Dothistroma_septosporum 2 2
Septoria_musiva_v1.0 4 4
Mycosphaerella_fijiensis_CIRAD86_ 2 2
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 1 1
Paracoccidioides_brasiliensis_Pb18_ 1 1
Coccidioides_posadasii_RMSCC_3488_ 1 1
Coccidioides_immitis_RS_ 1 1
Uncinocarpus_reesii_1704_ 3 3
Penicillium_chrysogenum_Wisconsin_54-1255_ 1 1
Penicillium_chrysogenum_v1.0 1 1
Aspergillus_acidus_v1.0 1 1
Aspergillus_fumigatus_Af293 2 2
Aspergillus_brasiliensis_v1.0 2 2
Aspergillus_glaucus 2 2
Aspergillus_carbonarius_ITEM_5010_ 2 2
Neosartorya_fischeri_NRRL_181_ 1 1
Aspergillus_terreus_NIH2624_ 1 1
Aspergillus_tubingensis_v1.0 2 2
Aspergillus_wentii_v1.0 1 1
Aspergillus_oryzae_RIB40_ 3 3
Aspergillus_niger_22 2 2
Aspergillus_niger_ATCC_1015_ 1 1
Aspergillus_flavus_NRRL3357_ 3 3
Aspergillus_clavatus_NRRL_1_ 3 3
Penicillium_marneffei_ATCC_18224_ 1 1
Tuber_melanosporum_Mel28_22 1 1
Tuber_melanosporum_Vittad_   (Perigord truffle)   1 1
Hansenula_polymorpha_v2.0 2 2
Dekkera_bruxellensis_CBS_2499_v2.0 1 1
Pichia_membranifaciensv1.0 1 1
Candida_tanzawaensis_NRRL_Y-17324__v1.0 2 2
Candida_dubliniensis_CD36_ 2 2
Candida_tropicalis_MYA-3404_ 4 4
Candida_parapsilosis_ 1 1
Candida_albicans_SC5314 3 3
Lodderomyces_elongisporus_NRRL_YB-4239_ 1 1
Babjeviella_inositovora_NRRL_Y-12698_v1.0 2 2
Pichia_stipitis_CBS_6054_ 1 1
Candida_guilliermondii_ATCC_6260_ 2 2
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 3 3
Debaromyces_hansenii 2 2
Wickerhamomyces_anomalus 1 1
Pichia_pastoris_GS115_ 1 1
Yarrowia_lipolytica_CLIB122 1 1
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 1 1
Candida_glabrata_CBS138 1 1
Kluyveromyces_waltii 1 1
Ashbya_gossypii_ATCC_10895_ 1 1
Zygosaccharomyces_rouxii_ 1 1
Schizosaccharomyces_japonicus_yFS275_ 1 1
Catenaria_anguillulae_PL171_v1.0 4 4
Allomyces_macrogynus_ATCC_38327_ 19 19
Spizellomyces_punctatus_DAOM_BR117_ 6 6
Dictyostelium_discoideum 10 10
Dictyostelium_purpureum_ 5 5
Entamoeba_dispar_1.2 8 8
Entamoeba_invadens_1.2 7 7
Entamoeba_histolytica_1 9 9
Selaginella_moellendorffii_ 16 15
Pinus_taeda   (Loblolly pine)   10 10
Picea_abies   (Norway spruce)   3 3
Eucalyptus_grandis_v201   (Rose gum)   16 16
Theobroma_cacao_B97-61/B2_v1   (Cacao)   6 6
Gossypium_raimondii_v221 28 28
Citrus_clementina_v165 6 6
Citrus_sinensis_v154   (Sweet orange)   13 13
Thellungiella_halophila_v173 3 3
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   7 7
Capsella_rubella_v183 7 7
Arabidopsis_lyrata_   (Lyrate rockcress)   4 4
Arabidopsis_thaliana_10   (Thale cress)   4 4
Carica_papaya_   (Papaya)   4 4
Medicago_truncatula_   (Barrel medic)   13 13
Phaseolus_vulgaris_v186   (French bean)   10 10
Glycine_max_v109   (Soybean)   17 17
Cucumis_sativus_v122   (Cucumber)   9 9
Fragaria_vesca_   (Wild strawberry)   6 6
Malus_domestica_v196   (Apple)   14 14
Prunus_persica_v139   (Peach)   6 6
Linum_usitatissimum_v200   (Flax)   7 7
Manihot_esculenta_v147   (Cassava)   11 11
Populus_trichocarpa_v156   (Black cottonwood)   12 12
Vitis_vinifera_   (Wine grape)   6 6
Mimulus_guttatus_v140   (Spotted monkey flower)   3 3
Solanum_lycopersicum_v.2.3   (Tomato)   4 4
Solanum_tuberosum_   (Potato)   10 10
Actinidia_chinensis_Hongyang_ 4 4
Aquilegia_coerulea_v195 16 16
Triticum_urartu_22 4 4
Triticum_aestivum_22   (Bread wheat)   14 14
Aegilops_tauschii_22 4 4
Brachypodium_distachyon_   (Stiff brome)   8 8
Oryza_barthii_22   (African wild rice)   9 9
Oryza_meridionalis_22 1 1
Oryza_glumaepatula_22 9 9
Oryza_glaberrima   (African rice)   5 5
Oryza_punctata_22 7 7
Oryza_nivara_22 10 10
Oryza_brachyantha_22   (Malo sina)   7 7
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   12 12
Oryza_sativa_v193   (Rice)   12 12
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   9 9
Panicum_virgatum_v202   (Switchgrass)   12 12
Setaria_italica_v164   (Foxtail millet)   5 5
Zea_mays_subsp._mays_   (Maize)   10 10
Zea_mays_v181   (Maize)   11 11
Sorghum_bicolor_   (Sorghum)   4 4
Musa_balbisiana   (Balbis banana)   10 10
Musa_acuminata_22   (Wild Malaysian banana)   9 9
Amborella_trichopoda_22 4 4
Physcomitrella_patens 7 7
Coccomyxa_subellipsoidea_sp._C-169_v2 1 1
Asterochloris_sp._Cgr/DA1pho_v1.0 11 11
Chlorella_variabilis_sp._NC64A_ 3 3
Volvox_carteri_f._nagariensis_ 8 8
Volvox_carteri_v199 9 8
Chlamydomonas_reinhardtii_4.0 9 9
Ostreococcus_sp._RCC809_ 4 4
Ostreococcus_lucimarinus_CCE9901_ 3 3
Ostreococcus_tauri_ 2 2
Bathycoccus_prasinos_ 1 1
Micromonas_sp._RCC299_ 9 9
Micromonas_pusilla_CCMP1545_v3.0 5 5
Thecamonas_trahens_ATCC_50062_ 9 9
Bigelowiella_natans_CCMP2755_22 15 15
Giardia_lamblia_2.3 4 4
Cyanophora_paradoxa_ 50 50
Leishmania_mexicana_2.4 8 7
Leishmania_major_strain_Friedlin_ 8 7
Leishmania_infantum_JPCM5_2.4 6 6
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 8 8
Trypanosoma_vivax_ 7 7
Trypanosoma_cruzi_strain_CL_Brener 7 7
Trypanosoma_congolense_2.4 15 11
Trypanosoma_brucei_gambiense_v4.1 8 8
Trypanosoma_brucei_TREU927_v4.1 9 9
Ectocarpus_siliculosus 10 10
Aureococcus_anophagefferens_ 6 6
Albugo_laibachii_22 19 19
Pythium_iwayamai_DAOM_BR242034_22 14 14
Pythium_arrhenomanes_ATCC_12531_22 12 12
Pythium_ultimum_v1.7-2 16 16
Pythium_aphanidermatum_DAOM_BR444_22 6 6
Pythium_irregulare_DAOM_BR486_22 11 10
Pythium_vexans_DAOM_BR484_22 10 10
Phytophthora_ramorum_1.1   (Sudden oak death agent)   10 10
Phytophthora_sojae_1.1 14 14
Phytophthora_infestans_T30-4_ 10 10
Phytophthora_capsici_ 12 12
Hyaloperonospora_arabidopsidis_22 2 2
Phaeodactylum_tricornutumCCAP_1055/1 1 1
Fragilariopsis_cylindrus 3 3
Thalassiosira_pseudonana_CCMP1335 5 5
Perkinsus_marinus_ATCC_50983_ 5 5
Paramecium_tetraurelia_ 24 22
Tetrahymena_thermophila_SB210_1_ 16 14
Ichthyophthirius_multifiliis_strain_G5_ 5 5
Cryptosporidium_hominis 1 1
Cryptosporidium_muris 1 1
Neospora_caninum 7 7
Toxoplasma_gondii_VEG 9 9
Toxoplasma_gondii_ME49 9 9
Toxoplasma_gondii_GT1 9 9
Plasmodium_falciparum_3D7_ 5 4
Plasmodium_vivax_SaI-1_7.0 3 3
Plasmodium_knowlesi_strain_H_ 5 5
Plasmodium_chabaudi_ 4 4
Plasmodium_berghei_ANKA_ 3 3
Symbiodinium_minutum_clade_B1_v1.2 11 11
Naegleria_gruberi_ 9 9
Trichomonas_vaginalis_ 23 23
Guillardia_theta_CCMP2712_v1.0_ 21 21
Emiliania_huxleyi_CCMP1516_ 4 3
Acaryochloris_marina_MBIC11017 1 1
Calothrix_sp._PCC_7507 1 1
Natranaerobius_thermophilus_JW/NM-WN-LF 2 2
Clostridium_clariflavum_DSM_19732 2 2
Pelotomaculum_thermopropionicum_SI 1 1
Syntrophobotulus_glycolicus_DSM_8271 1 1
Lactobacillus_plantarum_JDM1 1 1
Listeria_seeligeri_serovar_1/2b_str._SLCC3954 1 1
Listeria_ivanovii_subsp._ivanovii_PAM_55 2 2
Bacillus_weihenstephanensis_KBAB4 1 1
Bacillus_cellulosilyticus_DSM_2522 1 1
Chlorobium_tepidum_TLS 1 1
Haliscomenobacter_hydrossis_DSM_1100 1 1
Saprospira_grandis_str._Lewin 1 1
Flexibacter_litoralis_DSM_6794 2 2
Spirosoma_linguale_DSM_74 1 1
Flavobacterium_johnsoniae_UW101 2 2
Candidatus_Protochlamydia_amoebophila_UWE25 1 1
Turneriella_parva_DSM_21527 1 1
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._L550 1 1
Leptospira_interrogans_serovar_Lai_str._IPAV 6 6
Treponema_azotonutricium_ZAS-9 1 1
Leptotrichia_buccalis_C-1013-b 1 1
Bacteriovorax_marinus_SJ 1 1
Arcobacter_nitrofigilis_DSM_7299 1 1
Desulfatibacillum_alkenivorans_AK-01 1 1
Acidovorax_avenae_subsp._avenae_ATCC_19860 1 1
Azospirillum_lipoferum_4B 1 1
Saccharophagus_degradans_2-40 1 1
Cellvibrio_japonicus_Ueda107 1 1
Vibrio_sp._Ex25 1 1
Vibrio_harveyi_ATCC_BAA-1116 1 1
Vibrio_parahaemolyticus_RIMD_2210633 1 1
Vibrio_splendidus_LGP32 1 1
Marinomonas_mediterranea_MMB-1 1 1
Erwinia_amylovora_ATCC_49946 1 1
Pseudomonas_sp._VLB120 1 1

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   20 15
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   11 11
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   12 12
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   3 3
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   3 3
Cryptococcus_neoformans_var._grubii_H99_ 3 3
Cryptococcus_neoformans_B-3501A_ 2 2
Cryptococcus_neoformans_JEC21_ 2 2
Paracoccidioides_brasiliensis_Pb03_ 1 1
Coccidioides_posadasii_str._Silveira_ 1 1
Coccidioides_immitis_RMSCC_3703_ 1 1
Coccidioides_immitis_RMSCC_2394_ 1 1
Coccidioides_immitis_H538.4_ 1 1
Aspergillus_fumigatus_A1163_ 2 2
Candida_albicans_WO-1_ 3 3
Batrachochytrium_dendrobatidis_JEL423_ 8 6
Batrachochytrium_dendrobatidis_JAM81_ 5 5
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   4 4
Hordeum_vulgare_22   (Domesticated barley)   19 19
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   7 7
Trypanosoma_brucei_Lister_427_v4.1 8 8
Neospora_caninum_Nc-Liverpool_6.2 7 7
Plasmodium_falciparum_HB3_ 3 3
Chamaesiphon_minutus_PCC_6605 1 1
Oscillatoria_nigro-viridis_PCC_7112 1 1
Oscillatoria_acuminata_PCC_6304 1 1
Arthrospira_platensis_NIES-39 1 1
Cyanothece_sp._PCC_7425 2 2
Anabaena_cylindrica_PCC_7122 1 1
Desulfitobacterium_dichloroeliminans_LMG_P-21439 1 1
Desulfitobacterium_hafniense_DCB-2 1 1
Clostridium_tetani_genome_12124569 1 1
Lactobacillus_plantarum_subsp._plantarum_ST-III 1 1
Thermobacillus_composti_KWC4 1 1
Listeria_monocytogenes_EGD_sequence 1 1
Listeria_monocytogenes_J1816 1 1
Listeria_monocytogenes_SLCC2376 1 1
Listeria_monocytogenes_SLCC5850 1 1
Listeria_monocytogenes_SLCC2479 1 1
Listeria_monocytogenes_SLCC7179 1 1
Listeria_monocytogenes_serotype_1/2c_str._SLCC2372 1 1
Listeria_monocytogenes_08-5578 1 1
Listeria_monocytogenes_08-5923 1 1
Listeria_monocytogenes_10403S 1 1
Listeria_monocytogenes_Finland_1998 1 1
Listeria_monocytogenes_FSL_R2-561 1 1
Listeria_monocytogenes_EGD-e 1 1
Bacillus_toyonensis_BCT-7112 1 1
Bacillus_thuringiensis_MC28 1 1
Bacillus_thuringiensis_serovar_chinensis_CT-43 1 1
Bacillus_thuringiensis_YBT-1518 1 1
Bacillus_thuringiensis_Bt407 1 1
Bacillus_thuringiensis_serovar_kurstaki_str._HD73 1 1
Bacillus_thuringiensis_BMB171 1 1
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 1 1
Bacillus_cereus_FRI-35 1 1
Bacillus_cereus_AH820 1 1
Bacillus_cereus_AH187 1 1
Bacillus_cereus_B4264 1 1
Bacillus_cereus_G9842 1 1
Bacillus_cereus_Q1 1 1
Bacillus_cereus_NC7401 1 1
Bacillus_cereus_ATCC_14579 1 1
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._JB197 1 1
Leptospira_interrogans_serovar_Lai_str._56601 5 5
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 3 3
Bdellovibrio_bacteriovorus_str._Tiberius 1 1
Sorangium_cellulosum_So0157-2 1 1
Pandoraea_pnomenusa_3kgm 1 1
Ralstonia_solanacearum_Po82 1 1
Simiduia_agarivorans_SA1_=_DSM_21679 2 2
Vibrio_parahaemolyticus_BB22OP 1 1
Erwinia_amylovora_CFBP1430 1 1
Pseudomonas_putida_W619 1 1
Pseudomonas_fluorescens_R124 1 1
Pseudomonas_fluorescens_Pf0-1 1 1

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Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   5 5
Pan_troglodytes_69_2.1.4   (Chimpanzee)   6 6
Gorilla_gorilla_69_3.1   (Western gorilla)   8 8
Pongo_abelii_69_2   (Sumatran orangutan)   10 10
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   8 8
Macaca_mulatta_69_1   (Rhesus monkey)   7 7
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   5 5
Otolemur_garnettii_69_3   (Small-eared galago)   8 7
Microcebus_murinus_69_1   (Gray mouse lemur)   6 6
Rattus_norvegicus_69_3.4   (Norway rat)   8 7
Mus_musculus_69_38   (House mouse)   8 7
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   6 6
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   5 4
Cavia_porcellus_69_3   (Domestic guinea pig)   6 6
Oryctolagus_cuniculus_69_2   (Rabbit)   6 6
Ochotona_princeps_69   (American pika)   9 9
Tupaia_belangeri_69   (Northern tree shrew)   5 5
Sus_scrofa_69_10.2   (Pig)   9 9
Bos_taurus_69_3.1   (Cattle)   8 7
Vicugna_pacos_69_1   (Alpaca)   2 2
Tursiops_truncatus_69_1   (Bottlenose dolphin)   9 9
Mustela_putorius_furo_69_1.0   (Domestic ferret)   9 9
Ailuropoda_melanoleuca_69_1   (Giant panda)   5 5
Canis_familiaris_69_3.1   (Dog)   6 6
Felis_catus_69   (Domestic cat)   9 9
Equus_caballus_69_2   (Horse)   7 7
Myotis_lucifugus_69_2.0   (Little brown bat)   10 9
Pteropus_vampyrus_69_1   (Large flying fox)   12 12
Sorex_araneus_69_1   (European shrew)   5 5
Erinaceus_europaeus_69   (Western European hedgehog)   8 8
Procavia_capensis_69_1   (Cape rock hyrax)   7 7
Loxodonta_africana_69_3   (African savanna elephant)   10 10
Echinops_telfairi_69   (Small Madagascar hedgehog)   8 7
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   4 4
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   9 9
Macropus_eugenii_69_1.0   (Tammar wallaby)   9 9
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   10 9
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   11 11
Ornithorhynchus_anatinus_69_5   (Platypus)   8 8
Petromyzon_marinus_69_7.0   (Sea lamprey)   4 4
Meleagris_gallopavo_69_2   (Turkey)   8 8
Gallus_gallus_69_2   (Chicken)   9 9
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   9 9
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   12 12
Anolis_carolinensis_69_2.0   (Green anole)   9 9
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   7 7
Latimeria_chalumnae_69_1   (Coelacanth)   10 9
Gadus_morhua_69_1   (Atlantic cod)   9 9
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   9 9
Takifugu_rubripes_69_4   (Torafugu)   10 7
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   6 6
Oryzias_latipes_69_1   (Japanese medaka)   6 6
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   10 10
Oreochromis_niloticus_69_1.0   (Nile tilapia)   10 7
Danio_rerio_69_9   (Zebrafish)   7 7
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   8 8
Ciona_intestinalis_69   (Vase tunicate)   10 10
Drosophila_melanogaster_69_5   (Fruit fly)   8 8
Caenorhabditis_elegans_69_215   (Roundworm)   3 3
Arabidopsis_thaliana_10   (Thale cress)   3 3

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   33 33
Homo_sapiens__(NCBI_version)   (Human)   7 7
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   8 7
Heliconius_numata__(Incomplete) 5 5
Loa_loa_v3.3_(Request)   (Eye worm)   4 4
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   2 2
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   3 3
Moniliophthora_perniciosa_FA553__(Genome_survey) 3 3
Encephalitozoon_intestinalis__(endoparasite) 2 2
Encephalitozoon_cuniculi_(endoparasite) 2 2
Lotus_japonicus__(Early_assembly) 6 6
Malus_x_domestica_(Duplicate)   (Apple)   14 14
Ricinus_communis__(Early_assembly)   (Castor bean)   8 8
Nicotiana_benthamiana_0.4.4_(Early_draft) 9 9
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   5 5
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   4 4
Phoenix_dactylifera__(Early_draft)   (Date palm)   7 7
Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 1 1
NCBI_plasmid_sequences_(Plasmids) 3 3
NCBI_2017_08_genome 11321 11056
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 6 6
TargetDB__(Targets) 17 17
Protozoadb_2010_08_(Protozoadb) 188 183
STRING_v9.0.5_(STRING) 740 725
Uniprot_2018_03_genome 9046 8898

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