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Domain combinations for Beta-D-glucan exohydrolase, C-terminal domain superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Beta-D-glucan exohydrolase, C-terminal domain domain in that genome.

Complete genomes
Genome     Number   Proteins
Saccoglossus_kowalevskii_v3.0 4 4
Gallus_gallus_76_4   (Chicken)   1 1
Anas_platyrhynchos_76_1.0   (Mallard)   1 1
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   2 2
Ficedula_albicollis_76_1.0   (Collared flycatcher)   2 2
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   1 1
Ciona_intestinalis_76   (Vase tunicate)   1 1
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   1 1
Adineta_vaga 28 27
Octopus_bimaculoides_280 1 1
Crassostrea_gigas_22   (Pacific oyster)   2 2
Lottia_gigantea_   (Owl limpet)   20 20
Helobdella_robusta_ 1 1
Capitella_sp._I_ 6 6
Strigamia_maritima_22 1 1
Hymenolepis_microstoma_ 1 1
Echinococcus_multilocularis_ 2 1
Echinococcus_granulosus_ 1 1
Taenia_solium_   (Pork tapeworm)   1 1
Schistosoma_mansoni_ 2 1
Amphimedon_queenslandica 8 8
Proterospongia_sp._ATCC_50818_ 5 5
Monosiga_brevicollis_ 12 12
Sphaeroforma_arctica_JP610_ 2 2
Capsaspora_owczarzaki_ATCC_30864_ 1 1
Conidiobolus_coronatus_NRRL28638_v1.0 2 2
Mortierella_verticillata_NRRL_6337_ 1 1
Phycomyces_blakesleeanus_ 3 3
Rhizopus_oryzae_RA_99-880_ 6 6
Mucor_circinelloides_ 5 5
Rhizomucor_miehei_CAU432_ 6 6
Malassezia_globosa_CBS_7966_ 2 2
Sporisorium_reilianum_22 4 4
Ustilago_maydis_ 3 3
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 5 5
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 2 2
Melampsora_laricis-populina_ 3 3
Rhodotorula_graminis_WP1_v1.0 4 4
Sporobolomyces_roseus_IAM_13481_ 2 2
Microbotryum_violaceum_22 3 3
Wallemia_sebi_v1.0 4 4
Sphaerobolus_stellatus_v1.0 18 18
Piloderma_croceum_F_1598_v1.0 10 10
Serpula_lacrymans_var._lacrymans_S7.9_ 8 8
Coniophora_puteana 12 12
Hydnomerulius_pinastri_v2.0 13 12
Paxillus_rubicundulus_Ve08.2h10_v1.0 3 3
Pisolithus_microcarpus_441_v1.0 3 3
Pisolithus_tinctorius_Marx_270_v1.0 3 3
Scleroderma_citrinum_Foug_A_v1.0 3 3
Coprinopsis_cinerea_okayama7_130_v3 7 7
Pleurotus_ostreatus_   (Oyster mushroom)   11 11
Amanita_thiersii_Skay4041_v1.0 8 8
Amanita_muscaria_Koide_v1.0   (Fly agaric)   3 3
Galerina_marginata_v1.0 10 10
Hebeloma_cylindrosporum_h7_v2.0 4 4
Laccaria_bicolor_S238N-H82_ 2 2
Agaricus_bisporus_var._bisporus_ 7 7
Schizophyllum_commune_ 11 11
Stereum_hirsutum_FP-91666_SS1__v1.0 15 15
Heterobasidion_annosum_ 10 10
Gloeophyllum_trabeumv1.0 10 10
Punctularia_strigosozonata_v1.0 12 12
Sebacina_vermifera_MAFF_305830_v1.0 8 8
Fomitiporia_mediterranea_v1.0 8 7
Tulasnella_calospora_AL13/4D_v1.0 13 13
Postia_placenta_ 8 8
Wolfiporia_cocos_MD-104_SS10__v1.0 7 7
Fomitopsis_pinicolav1.0 13 13
Fomitopsis_pinicola_FP-58527_SS1_v3.0 12 12
Phanerochaete_chrysosporium_RP-78_2.1 10 10
Dichomitus_squalens 7 7
Trametes_versicolor_v1.0 12 12
Tremella_mesenterica_   (Witches' butter)   3 3
Daldinia_eschscholzii_EC12_v1.0 17 17
Apiospora_montagnei_NRRL_25634_v1.0 19 19
Magnaporthe_poae_ATCC_64411_22 13 13
Magnaporthe_grisea_70-15_ 17 17
Podospora_anserina_ 11 11
Sporotrichum_thermophile_ATCC_42464_ 9 9
Thielavia_terrestris_NRRL_8126_ 11 11
Chaetomium_globosum_CBS_148.51_ 11 11
Neurospora_tetrasperma_ 9 9
Neurospora_discreta_FGSC_8579_ 9 9
Neurospora_crassa_OR74A_ 8 8
Cryphonectria_parasitica_   (Chestnut blight fungus)   15 15
Verticillium_albo-atrum_VaMs.102_ 22 22
Verticillium_dahliae_VdLs.17_ 16 16
Acremonium_alcalophilumv_1.0 10 10
Glomerella_graminicola_22 18 18
Fusarium_graminearum_ 20 20
Nectria_haematococca_mpVI_ 38 38
Fusarium_oxysporum_f._sp._lycopersici_4286_ 31 31
Fusarium_verticillioides_7600_ 25 24
Trichoderma_asperellum_CBS_433.97_v1.0 16 16
Trichoderma_atroviride_ 14 14
Trichoderma_citrinoviride_v1.0 12 12
Trichoderma_reesei_1.2 12 12
Trichoderma_virens_Gv29-8_ 17 17
Trichoderma_longibrachiatum_ATCC_18648_v1.0 12 12
Trichoderma_harzianum_CBS_226.95_v1.0 16 16
Amorphotheca_resinae_v1.0   (Creosote fungus)   5 5
Botrytis_cinerea_B05.10_ 15 15
Sclerotinia_sclerotiorum_ 12 12
Didymella_exigua_CBS_183.55_v1.0 12 12
Leptosphaeria_maculans_22 12 12
Setosphaeria_turcica_v1.0 13 13
Cochliobolus_miyabeanus_ATCC_44560_v1.0 14 14
Cochliobolus_victoriae_FI3_v1.0 14 14
Cochliobolus_carbonum_26-R-13_v1.0 15 15
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   16 16
Alternaria_brassicicola_ 12 12
Cochliobolus_lunatus_m118_v2.0 16 16
Pyrenophora_teres_f._teres_22 11 11
Pyrenophora_tritici-repentis_ 11 11
Stagonospora_nodorum_ 16 15
Mycosphaerella_graminicola_IPO323_ 14 14
Zasmidium_cellare_ATCC_36951_v1.0 20 19
Dothistroma_septosporum 12 12
Septoria_musiva_v1.0 8 8
Mycosphaerella_fijiensis_CIRAD86_ 12 12
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 21 21
Paracoccidioides_brasiliensis_Pb18_ 3 3
Coccidioides_posadasii_RMSCC_3488_ 3 3
Coccidioides_immitis_RS_ 3 3
Ajellomyces_dermatitidis_SLH14081_ 3 3
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 3 3
Microsporum_canis_CBS_113480_ 4 4
Trichophyton_equinum_CBS_127.97_ 4 4
Trichophyton_verrucosum_HKI_0517_ 5 5
Arthroderma_benhamiae_CBS_112371_ 5 5
Trichophyton_tonsurans_CBS_112818_ 5 5
Trichophyton_rubrum_CBS_118892_ 5 5
Uncinocarpus_reesii_1704_ 4 4
Aspergillus_zonatus_v1.0 14 14
Penicillium_chrysogenum_Wisconsin_54-1255_ 15 15
Penicillium_chrysogenum_v1.0 14 14
Aspergillus_acidus_v1.0 16 16
Aspergillus_fumigatus_Af293 15 15
Aspergillus_brasiliensis_v1.0 18 18
Aspergillus_nidulans_FGSC_A4_ 18 18
Aspergillus_sydowii_v1.0 28 28
Aspergillus_versicolor_v1.0 30 28
Aspergillus_glaucus 13 13
Aspergillus_carbonarius_ITEM_5010_ 12 12
Neosartorya_fischeri_NRRL_181_ 19 17
Aspergillus_terreus_NIH2624_ 18 18
Aspergillus_tubingensis_v1.0 14 14
Aspergillus_wentii_v1.0 13 13
Aspergillus_oryzae_RIB40_ 21 21
Aspergillus_niger_22 15 15
Aspergillus_niger_ATCC_1015_ 12 12
Aspergillus_flavus_NRRL3357_ 22 22
Aspergillus_clavatus_NRRL_1_ 8 8
Penicillium_marneffei_ATCC_18224_ 10 10
Tuber_melanosporum_Mel28_22 4 4
Tuber_melanosporum_Vittad_   (Perigord truffle)   4 4
Hansenula_polymorpha_v2.0 4 4
Dekkera_bruxellensis_CBS_2499_v2.0 2 2
Candida_tanzawaensis_NRRL_Y-17324__v1.0 2 2
Candida_dubliniensis_CD36_ 1 1
Candida_tropicalis_MYA-3404_ 2 2
Candida_parapsilosis_ 1 1
Candida_albicans_SC5314 2 2
Babjeviella_inositovora_NRRL_Y-12698_v1.0 5 5
Pichia_stipitis_CBS_6054_ 7 7
Candida_guilliermondii_ATCC_6260_ 5 5
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 2 2
Debaromyces_hansenii 3 3
Wickerhamomyces_anomalus 6 6
Pichia_pastoris_GS115_ 1 1
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 3 3
Yarrowia_lipolytica_CLIB122 5 5
Candida_lusitaniae_ATCC_42720_ 3 3
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 3 3
Lachancea_kluyveri_ 1 1
Saccharomyces_mikatae_MIT 3 3
Kluyveromyces_lactis 3 3
Schizosaccharomyces_pombe   (Fission yeast)   1 1
Spizellomyces_punctatus_DAOM_BR117_ 1 1
Dictyostelium_discoideum 1 1
Dictyostelium_purpureum_ 1 1
Entamoeba_dispar_1.2 1 1
Entamoeba_invadens_1.2 2 2
Entamoeba_histolytica_1 1 1
Selaginella_moellendorffii_ 12 12
Pinus_taeda   (Loblolly pine)   38 36
Picea_abies   (Norway spruce)   21 20
Eucalyptus_grandis_v201   (Rose gum)   27 27
Theobroma_cacao_B97-61/B2_v1   (Cacao)   22 22
Gossypium_raimondii_v221 47 47
Citrus_clementina_v165 22 22
Citrus_sinensis_v154   (Sweet orange)   30 30
Thellungiella_halophila_v173 18 18
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   23 23
Capsella_rubella_v183 16 16
Arabidopsis_lyrata_   (Lyrate rockcress)   15 15
Arabidopsis_thaliana_10   (Thale cress)   20 20
Carica_papaya_   (Papaya)   16 16
Medicago_truncatula_   (Barrel medic)   30 30
Phaseolus_vulgaris_v186   (French bean)   17 17
Glycine_max_v109   (Soybean)   34 34
Cucumis_sativus_v122   (Cucumber)   20 20
Fragaria_vesca_   (Wild strawberry)   16 16
Malus_domestica_v196   (Apple)   50 47
Prunus_persica_v139   (Peach)   20 20
Linum_usitatissimum_v200   (Flax)   32 32
Manihot_esculenta_v147   (Cassava)   18 18
Populus_trichocarpa_v156   (Black cottonwood)   26 26
Vitis_vinifera_   (Wine grape)   25 24
Mimulus_guttatus_v140   (Spotted monkey flower)   35 35
Solanum_lycopersicum_v.2.3   (Tomato)   18 18
Solanum_tuberosum_   (Potato)   31 31
Actinidia_chinensis_Hongyang_ 19 19
Aquilegia_coerulea_v195 34 34
Triticum_urartu_22 17 17
Triticum_aestivum_22   (Bread wheat)   45 45
Aegilops_tauschii_22 19 18
Brachypodium_distachyon_   (Stiff brome)   16 16
Oryza_barthii_22   (African wild rice)   21 21
Oryza_meridionalis_22 21 21
Oryza_glumaepatula_22 22 22
Oryza_glaberrima   (African rice)   16 16
Oryza_punctata_22 22 21
Oryza_nivara_22 30 30
Oryza_brachyantha_22   (Malo sina)   17 16
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   28 28
Oryza_sativa_v193   (Rice)   28 28
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   20 20
Panicum_virgatum_v202   (Switchgrass)   45 45
Setaria_italica_v164   (Foxtail millet)   30 30
Zea_mays_subsp._mays_   (Maize)   39 39
Zea_mays_v181   (Maize)   39 39
Sorghum_bicolor_   (Sorghum)   19 18
Musa_balbisiana   (Balbis banana)   25 24
Musa_acuminata_22   (Wild Malaysian banana)   25 24
Amborella_trichopoda_22 20 19
Physcomitrella_patens 10 10
Asterochloris_sp._Cgr/DA1pho_v1.0 2 2
Chlorella_variabilis_sp._NC64A_ 2 2
Thecamonas_trahens_ATCC_50062_ 1 1
Bigelowiella_natans_CCMP2755_22 7 7
Ectocarpus_siliculosus 1 1
Aureococcus_anophagefferens_ 5 5
Albugo_laibachii_22 4 4
Pythium_iwayamai_DAOM_BR242034_22 8 8
Pythium_arrhenomanes_ATCC_12531_22 7 7
Pythium_ultimum_v1.7-2 6 6
Pythium_aphanidermatum_DAOM_BR444_22 7 7
Pythium_irregulare_DAOM_BR486_22 8 8
Pythium_vexans_DAOM_BR484_22 15 15
Phytophthora_ramorum_1.1   (Sudden oak death agent)   27 27
Phytophthora_sojae_1.1 31 31
Phytophthora_infestans_T30-4_ 21 21
Phytophthora_capsici_ 27 27
Hyaloperonospora_arabidopsidis_22 6 6
Phaeodactylum_tricornutumCCAP_1055/1 3 3
Fragilariopsis_cylindrus 5 5
Paramecium_tetraurelia_ 2 2
Tetrahymena_thermophila_SB210_1_ 2 2
Symbiodinium_minutum_clade_B1_v1.2 19 19
Trichomonas_vaginalis_ 2 2
Emiliania_huxleyi_CCMP1516_ 22 21
Thermobaculum_terrenum_ATCC_BAA-798 5 5
Conexibacter_woesei_DSM_14684 1 1
Slackia_heliotrinireducens_DSM_20476 1 1
Olsenella_uli_DSM_7084 4 4
Coriobacterium_glomerans_PW2 1 1
Rubrobacter_xylanophilus_DSM_9941 1 1
Ilumatobacter_coccineus 1 1
Thermobispora_bispora_DSM_43833 2 2
Nakamurella_multipartita_DSM_44233 1 1
Acidothermus_cellulolyticus_11B 3 2
Modestobacter_marinus 9 9
Kineococcus_radiotolerans_SRS30216 7 7
Catenulispora_acidiphila_DSM_44928 16 16
Stackebrandtia_nassauensis_DSM_44728 5 5
Frankia_sp._EAN1pec 7 7
Thermobifida_fusca_YX 2 2
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 4 4
Thermomonospora_curvata_DSM_43183 1 1
Streptosporangium_roseum_DSM_43021 5 5
Kitasatospora_setae_KM-6054 2 2
Streptomyces_coelicolor_A3(2) 7 7
Streptomyces_sp._PAMC26508 7 7
Streptomyces_flavogriseus_ATCC_33331 7 7
Streptomyces_sp._SirexAA-E 6 6
Streptomyces_griseus_subsp._griseus_NBRC_13350 2 2
Streptomyces_bingchenggensis_BCW-1 10 10
Streptomyces_violaceusniger_Tu_4113 9 9
Streptomyces_avermitilis_MA-4680 4 4
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1 1
Streptomyces_scabiei_87.22 8 8
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 5 5
Actinosynnema_mirum_DSM_43827 8 8
Saccharomonospora_viridis_DSM_43017 2 2
Saccharopolyspora_erythraea_NRRL_2338 4 4
Amycolatopsis_mediterranei_U32 12 12
Kribbella_flavida_DSM_17836 7 7
Nocardioides_sp._JS614 2 2
Propionibacterium_acnes_SK137 1 1
Microlunatus_phosphovorus_NM-1 9 9
Propionibacterium_freudenreichii_subsp._shermanii_CIRM-BIA1 1 1
Salinispora_arenicola_CNS-205 1 1
Salinispora_tropica_CNB-440 1 1
Verrucosispora_maris_AB-18-032 2 2
Micromonospora_sp._L5 2 2
Micromonospora_aurantiaca_ATCC_27029 2 2
Actinoplanes_sp._N902-109 10 10
Actinoplanes_sp._SE50/110 5 5
Actinoplanes_missouriensis_431 9 9
Tsukamurella_paurometabola_DSM_20162 1 1
Gordonia_sp._KTR9 1 1
Gordonia_polyisoprenivorans_VH2 1 1
Rhodococcus_jostii_RHA1 1 1
Rhodococcus_equi_103S 1 1
Rhodococcus_erythropolis_PR4 1 1
Nocardia_cyriacigeorgica_GUH-2 1 1
Nocardia_farcinica_IFM_10152 2 2
Amycolicicoccus_subflavus_DQS3-9A1 1 1
Mycobacterium_intracellulare_ATCC_13950 1 1
Mycobacterium_avium_104 1 1
Mycobacterium_canettii_CIPT_140010059 1 1
Mycobacterium_tuberculosis_KZN_1435 1 1
Mycobacterium_tuberculosis 1 1
Mycobacterium_bovis_BCG_str._Pasteur_1173P2 1 1
Mycobacterium_rhodesiae_NBB3 1 1
Mycobacterium_ulcerans_Agy99 1 1
Mycobacterium_marinum_M 1 1
Mycobacterium_smegmatis_str._MC2_155 2 2
Corynebacterium_efficiens_YS-314 1 1
Corynebacterium_variabile_DSM_44702 1 1
Corynebacterium_glutamicum_R 1 1
Sanguibacter_keddieii_DSM_10542 10 10
Beutenbergia_cavernae_DSM_12333 5 5
Microbacterium_testaceum_StLB037 6 6
Clavibacter_michiganensis_subsp._michiganensis_NCPPB_382 8 8
Jonesia_denitrificans_DSM_20603 6 6
Intrasporangium_calvum_DSM_43043 1 1
Brachybacterium_faecium_DSM_4810 4 4
Isoptericola_variabilis_225 3 3
Xylanimonas_cellulosilytica_DSM_15894 3 3
Cellulomonas_flavigena_DSM_20109 3 3
Cellulomonas_fimi_ATCC_484 9 9
[Cellvibrio]_gilvus_ATCC_13127 5 5
Arthrobacter_phenanthrenivorans_Sphe3 3 3
Arthrobacter_chlorophenolicus_A6 3 3
Arthrobacter_aurescens_TC1 5 5
Arthrobacter_arilaitensis_Re117 1 1
Arthrobacter_sp._Rue61a 7 7
Arthrobacter_sp._FB24 2 2
Bifidobacterium_longum_subsp._longum_JDM301 3 3
Bifidobacterium_animalis_subsp._lactis_Bl-04 2 2
Bifidobacterium_dentium_Bd1 12 12
Bifidobacterium_breve_ACS-071-V-Sch8b 4 4
Bifidobacterium_adolescentis_ATCC_15703 5 5
Actinomyces_sp._F0330 1 1
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 2 2
Anaerolinea_thermophila_UNI-1 3 3
Herpetosiphon_aurantiacus_DSM_785 2 2
Roseiflexus_sp._RS-1 1 1
Roseiflexus_castenholzii_DSM_13941 2 2
Chloroflexus_sp._MS-G 1 1
Chloroflexus_sp._Y-400-fl 4 4
Chloroflexus_aggregans_DSM_9485 3 3
Chloroflexus_aurantiacus_J-10-fl 4 4
Deinococcus_gobiensis_I-0 2 2
Deinococcus_maricopensis_DSM_21211 1 1
Deinococcus_proteolyticus_MRP 1 1
Oceanithermus_profundus_DSM_14977 1 1
Meiothermus_silvanus_DSM_9946 2 2
Anaerococcus_prevotii_DSM_20548 1 1
Selenomonas_ruminantium_subsp._lactilytica_TAM6421 1 1
Symbiobacterium_thermophilum_IAM_14863 2 2
Clostridiales_genomosp._BVAB3_str._UPII9-5 2 2
Clostridium_clariflavum_DSM_19732 2 2
Eubacterium_siraeum 3 3
Clostridium_cellulolyticum_H10 4 4
Clostridium_thermocellum_ATCC_27405 1 1
Faecalibacterium_prausnitzii 2 2
Ruminococcus_sp. 3 3
Ruminococcus_albus_7 3 3
Sulfobacillus_acidophilus_DSM_10332 1 1
Pelotomaculum_thermopropionicum_SI 1 1
Acetobacterium_woodii_DSM_1030 1 1
Eubacterium_limosum_KIST612 1 1
Clostridium_phytofermentans_ISDg 6 6
Clostridium_lentocellum_DSM_5427 4 4
[Ruminococcus]_obeum 4 4
[Ruminococcus]_torques 3 3
Eubacterium_rectale_M104/1 2 2
Eubacterium_rectale_ATCC_33656 3 3
Coprococcus_sp._ART55/1 1 1
Roseburia_hominis_A2-183 3 3
Roseburia_intestinalis 8 8
Butyrivibrio_proteoclasticus_B316 8 8
Butyrivibrio_fibrisolvens 6 6
Clostridium_sp._BNL1100 4 4
Clostridium_beijerinckii_NCIMB_8052 6 6
Clostridium_perfringens_ATCC_13124 1 1
Clostridium_cellulovorans_743B 4 4
Clostridium_acetobutylicum_ATCC_824 2 2
Mahella_australiensis_50-1_BON 3 3
Caldicellulosiruptor_obsidiansis_OB47 1 1
Caldicellulosiruptor_kronotskyensis_2002 1 1
Caldicellulosiruptor_hydrothermalis_108 1 1
Caldicellulosiruptor_owensensis_OL 1 1
Caldicellulosiruptor_lactoaceticus_6A 1 1
Caldicellulosiruptor_kristjanssonii_177R1B 1 1
Caldicellulosiruptor_saccharolyticus_DSM_8903 2 2
Caldicellulosiruptor_bescii_DSM_6725 1 1
Thermoanaerobacterium_thermosaccharolyticum_DSM_571 2 2
Thermoanaerobacter_tengcongensis_MB4 2 2
Thermoanaerobacter_mathranii_subsp._mathranii_str._A3 2 2
Thermoanaerobacter_pseudethanolicus_ATCC_33223 1 1
Thermoanaerobacter_sp._X514 1 1
Thermoanaerobacter_italicus_Ab9 2 2
Thermoanaerobacter_wiegelii_Rt8.B1 1 1
Thermoanaerobacter_brockii_subsp._finnii_Ako-1 1 1
Halothermothrix_orenii_H_168 2 2
Halanaerobium_praevalens_DSM_2228 2 2
Carnobacterium_sp._17-4 2 2
Carnobacterium_sp._WN1359 1 1
Tetragenococcus_halophilus_NBRC_12172 1 1
Enterococcus_sp._7L76 1 1
Enterococcus_hirae_ATCC_9790 2 2
Enterococcus_faecalis_62 1 1
Oenococcus_oeni_PSU-1 1 1
Leuconostoc_mesenteroides_subsp._mesenteroides_ATCC_8293 1 1
Lactobacillus_casei_ATCC_334 1 1
Lactobacillus_rhamnosus_Lc_705 1 1
Lactobacillus_gasseri_ATCC_33323 1 1
Lactobacillus_buchneri_NRRL_B-30929 1 1
Lactobacillus_buchneri 1 1
Lactobacillus_brevis_ATCC_367 1 1
Lactococcus_lactis_subsp._cremoris_MG1363 1 1
Streptococcus_suis_P1/7 2 2
Streptococcus_sanguinis_SK36 1 1
Exiguobacterium_sp._MH3 1 1
Exiguobacterium_sp._AT1b 2 2
Exiguobacterium_sibiricum_255-15 1 1
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_DSM_446 2 2
Brevibacillus_brevis_NBRC_100599 1 1
Paenibacillus_sp._JDR-2 14 14
Paenibacillus_terrae_HPL-003 6 6
Paenibacillus_mucilaginosus_3016 5 5
Paenibacillus_polymyxa_M1 4 4
Listeria_welshimeri_serovar_6b_str._SLCC5334 3 3
Listeria_innocua_Clip11262 1 1
Listeria_seeligeri_serovar_1/2b_str._SLCC3954 3 3
Listeria_monocytogenes_serotype_4b_str._CLIP_80459 2 2
Listeria_ivanovii_subsp._ivanovii_PAM_55 2 2
Geobacillus_thermoglucosidasius_C56-YS93 1 1
Oceanobacillus_iheyensis_HTE831 1 1
Geobacillus_sp._GHH01 1 1
Geobacillus_sp._WCH70 1 1
Geobacillus_thermodenitrificans_NG80-2 1 1
Halobacillus_halophilus_DSM_2266 1 1
Bacillus_sp._JS 1 1
Bacillus_amyloliquefaciens_FZB42 1 1
Bacillus_atrophaeus_1942 1 1
Bacillus_subtilis_subsp._subtilis_str._168 1 1
Bacillus_licheniformis_DSM_13_=_ATCC_14580 2 2
Bacillus_halodurans_C-125 2 2
Bacillus_weihenstephanensis_KBAB4 1 1
Bacillus_pseudofirmus_OF4 1 1
Bacillus_clausii_KSM-K16 1 1
Bacillus_cellulosilyticus_DSM_2522 3 3
Bacillus_pumilus_SAFR-032 1 1
Staphylococcus_carnosus_subsp._carnosus_TM300 2 2
Gemmatimonas_aurantiaca_T-27 1 1
Melioribacter_roseus_P3M 5 5
Ignavibacterium_album_JCM_16511 2 2
Chlorobium_phaeobacteroides_DSM_266 1 1
Chlorobium_phaeovibrioides_DSM_265 1 1
Chlorobium_limicola_DSM_245 1 1
Chlorobaculum_parvum_NCIB_8327 1 1
Chlorobium_tepidum_TLS 1 1
Chloroherpeton_thalassium_ATCC_35110 1 1
Prosthecochloris_aestuarii_DSM_271 1 1
Haliscomenobacter_hydrossis_DSM_1100 5 5
Niastella_koreensis_GR20-10 10 10
Chitinophaga_pinensis_DSM_2588 4 4
Salinibacter_ruber_M8 2 2
Rhodothermus_marinus_DSM_4252 6 6
Flexibacter_litoralis_DSM_6794 1 1
Cyclobacterium_marinum_DSM_745 1 1
Marivirga_tractuosa_DSM_4126 2 2
Fibrella_aestuarina 4 4
Leadbetterella_byssophila_DSM_17132 2 2
Dyadobacter_fermentans_DSM_18053 2 2
Cytophaga_hutchinsonii_ATCC_33406 5 5
Spirosoma_linguale_DSM_74 4 4
Runella_slithyformis_DSM_19594 3 3
Parabacteroides_distasonis_ATCC_8503 7 7
Tannerella_forsythia_ATCC_43037 3 3
Paludibacter_propionicigenes_WB4 11 11
Odoribacter_splanchnicus_DSM_20712 1 1
Bacteroides_sp._CF50 1 1
Prevotella_melaninogenica_ATCC_25845 1 1
Prevotella_denticola_F0289 1 1
Prevotella_ruminicola_23 11 11
Alistipes_finegoldii_DSM_17242 7 7
Bacteroides_salanitronis_DSM_18170 8 8
Bacteroides_helcogenes_P_36-108 7 7
Bacteroides_vulgatus_ATCC_8482 4 4
Bacteroides_thetaiotaomicron_VPI-5482 9 9
Bacteroides_fragilis_YCH46 7 7
Pedobacter_saltans_DSM_12145 5 5
Solitalea_canadensis_DSM_3403 12 12
Pedobacter_heparinus_DSM_2366 4 4
Sphingobacterium_sp._21 3 3
Fluviicola_taffensis_DSM_16823 1 1
Owenweeksia_hongkongensis_DSM_17368 1 1
Zunongwangia_profunda_SM-A87 10 10
Krokinobacter_sp._4H-3-7-5 1 1
Gramella_forsetii_KT0803 3 3
Maribacter_sp._HTCC2170 1 1
Robiginitalea_biformata_HTCC2501 3 3
Croceibacter_atlanticus_HTCC2559 1 1
Aequorivita_sublithincola_DSM_14238 1 1
Zobellia_galactanivorans 3 3
Muricauda_ruestringensis_DSM_13258 3 3
Cellulophaga_algicola_DSM_14237 3 3
Cellulophaga_lytica_DSM_7489 4 4
Flavobacteriaceae_bacterium_3519-10 2 2
Polaribacter_sp._MED152 1 1
Riemerella_anatipestifer_ATCC_11845_=_DSM_15868 1 1
Ornithobacterium_rhinotracheale_DSM_15997 1 1
Capnocytophaga_canimorsus_Cc5 1 1
Capnocytophaga_ochracea_DSM_7271 3 3
Weeksella_virosa_DSM_16922 1 1
Flavobacterium_psychrophilum_JIP02/86 1 1
Flavobacterium_branchiophilum_FL-15 3 3
Flavobacterium_columnare_ATCC_49512 1 1
Flavobacterium_johnsoniae_UW101 12 12
Fibrobacter_succinogenes_subsp._succinogenes_S85 1 1
Methylacidiphilum_infernorum_V4 1 1
Opitutus_terrae_PB90-1 6 6
Brachyspira_murdochii_DSM_12563 1 1
Brachyspira_intermedia_PWS/A 1 1
Brachyspira_hyodysenteriae_WA1 1 1
Spirochaeta_smaragdinae_DSM_11293 3 3
Sphaerochaeta_pleomorpha_str._Grapes 3 3
Sphaerochaeta_globus_str._Buddy 3 3
Sphaerochaeta_coccoides_DSM_17374 1 1
Spirochaeta_caldaria_DSM_7334 2 2
Treponema_azotonutricium_ZAS-9 3 3
Treponema_primitia_ZAS-2 1 1
Treponema_brennaborense_DSM_12168 1 1
Treponema_succinifaciens_DSM_2489 1 1
Spirochaeta_africana_DSM_8902 1 1
Spirochaeta_thermophila_DSM_6192 4 4
Petrotoga_mobilis_SJ95 1 1
Mesotoga_prima_MesG1.Ag.4.2 1 1
Kosmotoga_olearia_TBF_19.5.1 1 1
Fervidobacterium_pennivorans_DSM_9078 1 1
Fervidobacterium_nodosum_Rt17-B1 2 2
Thermosipho_africanus_TCF52B 1 1
Thermotoga_lettingae_TMO 2 2
Thermotoga_thermarum_DSM_5069 2 2
Thermotoga_sp._RQ2 3 3
Thermotoga_naphthophila_RKU-10 2 2
Thermotoga_petrophila_RKU-1 2 2
Thermotoga_neapolitana_DSM_4359 2 2
Thermotoga_maritima_MSB8 2 2
Elusimicrobium_minutum_Pei191 1 1
Dictyoglomus_turgidum_DSM_6724 5 5
Dictyoglomus_thermophilum_H-6-12 5 5
Candidatus_Solibacter_usitatus_Ellin6076 4 4
Granulicella_tundricola_MP5ACTX9 6 6
Granulicella_mallensis_MP5ACTX8 12 12
Candidatus_Koribacter_versatilis_Ellin345 7 7
Terriglobus_saanensis_SP1PR4 3 3
Terriglobus_roseus_DSM_18391 3 3
Acidobacterium_capsulatum_ATCC_51196 6 6
Haliangium_ochraceum_DSM_14365 3 3
Sorangium_cellulosum_'So_ce_56' 3 3
Anaeromyxobacter_sp._Fw109-5 1 1
Stigmatella_aurantiaca_DW4/3-1 8 8
Corallococcus_coralloides_DSM_2259 1 1
Myxococcus_fulvus_HW-1 1 1
Leptothrix_cholodnii_SP-6 1 1
Cupriavidus_metallidurans_CH34 1 1
Ralstonia_solanacearum_CFBP2957 1 1
Burkholderia_sp._CCGE1002 3 3
Burkholderia_thailandensis_E264 2 2
Burkholderia_pseudomallei_1106a 3 3
Burkholderia_mallei_SAVP1 2 2
Burkholderia_ambifaria_AMMD 4 4
Burkholderia_cenocepacia_HI2424 2 2
Burkholderia_multivorans_ATCC_17616 1 1
Burkholderia_vietnamiensis_G4 1 1
Burkholderia_gladioli_BSR3 1 1
Burkholderia_glumae_BGR1 1 1
Verminephrobacter_eiseniae_EF01-2 1 1
Ramlibacter_tataouinensis_TTB310 1 1
Variovorax_paradoxus_S110 2 2
Rhodoferax_ferrireducens_T118 1 1
Herbaspirillum_seropedicae_SmR1 1 1
Nitrosomonas_eutropha_C91 2 2
Asticcacaulis_excentricus_CB_48 11 11
Brevundimonas_subvibrioides_ATCC_15264 3 3
Caulobacter_sp._K31 8 8
Caulobacter_crescentus_NA1000 6 6
Caulobacter_segnis_ATCC_21756 7 7
Phenylobacterium_zucineum_HLK1 2 2
Sphingopyxis_alaskensis_RB2256 2 2
Novosphingobium_sp._PP1Y 6 6
Novosphingobium_aromaticivorans_DSM_12444 4 4
Sphingobium_japonicum_UT26S 6 6
Sphingobium_chlorophenolicum_L-1 5 5
Sphingomonas_sp._MM-1 5 5
Maricaulis_maris_MCS10 3 3
Hirschia_baltica_ATCC_49814 6 6
Hyphomonas_neptunium_ATCC_15444 1 1
Pseudovibrio_sp._FO-BEG1 2 1
Ketogulonicigenium_vulgare_Y25 3 3
Ketogulonigenium_vulgarum_WSH-001 2 2
Rhodobacter_capsulatus_SB_1003 1 1
Rhodospirillum_photometricum_DSM_122 2 2
Tistrella_mobilis_KA081020-065 1 1
Rhodospirillum_rubrum_F11 1 1
Gluconacetobacter_xylinus_NBRC_3288 2 2
Gluconacetobacter_diazotrophicus_PAl_5 1 1
Acidiphilium_multivorum_AIU301 1 1
Acidiphilium_cryptum_JF-5 1 1
Micavibrio_aeruginosavorus_ARL-13 1 1
Methylobacterium_chloromethanicum_CM4 1 1
Methylobacterium_extorquens_AM1 1 1
Methylobacterium_populi_BJ001 1 1
Methylobacterium_nodulans_ORS_2060 1 1
Sinorhizobium_fredii_NGR234 1 1
Rhizobium_etli_CIAT_652 2 2
Rhizobium_leguminosarum_bv._viciae_3841 1 1
Agrobacterium_radiobacter_K84 4 4
Agrobacterium_vitis_S4 2 2
Methylocella_silvestris_BL2 1 1
Pelagibacterium_halotolerans_B2 1 1
Rhodomicrobium_vannielii_ATCC_17100 1 1
Methylocystis_sp._SC2 1 1
Saccharophagus_degradans_2-40 5 5
Teredinibacter_turnerae_T7901 4 4
Cellvibrio_japonicus_Ueda107 4 4
Oceanimonas_sp._GK1 1 1
Tolumonas_auensis_DSM_9187 3 3
Aeromonas_veronii_B565 1 1
Aeromonas_salmonicida_subsp._salmonicida_A449 1 1
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 1 1
Vibrio_harveyi_ATCC_BAA-1116 1 1
Vibrio_anguillarum_775 1 1
Vibrio_vulnificus_MO6-24/O 1 1
Photobacterium_profundum_SS9 1 1
Psychromonas_ingrahamii_37 2 2
Shewanella_piezotolerans_WP3 2 2
Shewanella_halifaxensis_HAW-EB4 1 1
Shewanella_denitrificans_OS217 1 1
Shewanella_pealeana_ATCC_700345 1 1
Shewanella_baltica_OS185 1 1
Shewanella_woodyi_ATCC_51908 4 4
Shewanella_amazonensis_SB2B 1 1
Shewanella_violacea_DSS12 1 1
Shewanella_frigidimarina_NCIMB_400 2 2
Colwellia_psychrerythraea_34H 6 6
Pseudoalteromonas_sp._SM9913 2 2
Pseudoalteromonas_atlantica_T6c 2 2
Pseudoalteromonas_haloplanktis_TAC125 1 1
Glaciecola_sp._4H-3-7+YE-5 4 4
Glaciecola_nitratireducens_FR1064 2 2
Alteromonas_sp._SN2 1 1
Alteromonas_macleodii_str._'Deep_ecotype' 1 1
Hahella_chejuensis_KCTC_2396 1 1
Marinomonas_posidonica_IVIA-Po-181 1 1
Marinomonas_sp._MWYL1 3 3
Halomonas_elongata_DSM_2581 1 1
Methylomonas_methanica_MC09 1 1
Rhodanobacter_denitrificans 1 1
Pseudoxanthomonas_spadix_BD-a59 2 2
Pseudoxanthomonas_suwonensis_11-1 4 4
Stenotrophomonas_maltophilia_K279a 3 3
Xylella_fastidiosa_M23 2 2
Xanthomonas_axonopodis_pv._citri_str._306 5 5
Xanthomonas_albilineans_GPE_PC73 5 5
Xanthomonas_oryzae_pv._oryzae_PXO99A 5 5
Xanthomonas_campestris_pv._campestris_str._B100 6 6
Edwardsiella_ictaluri_93-146 2 2
Edwardsiella_tarda_EIB202 3 3
Rahnella_sp._Y9602 3 3
Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 3 3
Yersinia_pseudotuberculosis_IP_31758 2 2
Yersinia_pestis_Pestoides_F 2 2
Serratia_sp._AS12 1 1
Serratia_sp._ATCC_39006 3 3
Serratia_plymuthica_AS9 1 1
Serratia_proteamaculans_568 1 1
Dickeya_dadantii_Ech703 2 2
Dickeya_zeae_Ech1591 2 2
Pectobacterium_wasabiae_WPP163 2 2
Pectobacterium_sp._SCC3193 2 2
Pectobacterium_atrosepticum_SCRI1043 2 2
Pectobacterium_carotovorum_subsp._carotovorum_PC1 2 2
Sodalis_glossinidius_str._'morsitans' 1 1
Pantoea_sp._At-9b 2 2
Pantoea_vagans_C9-1 1 1
Pantoea_ananatis_LMG_20103 2 2
Erwinia_tasmaniensis_Et1/99 1 1
Erwinia_sp._Ejp617 1 1
Erwinia_billingiae_Eb661 2 2
Erwinia_pyrifoliae_Ep1/96 1 1
Erwinia_amylovora_ATCC_49946 1 1
Escherichia_blattae_DSM_4481 2 2
Cronobacter_turicensis_z3032 2 2
Cronobacter_sakazakii_ES15 2 2
Enterobacteriaceae_bacterium_strain_FGI_57 3 3
Shigella_sonnei_Ss046 1 1
Shigella_flexneri_5_str._8401 1 1
Shigella_dysenteriae_Sd197 1 1
Shigella_boydii_CDC_3083-94 1 1
Salmonella_bongori_NCTC_12419 1 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_C_strain_RKS4594 1 1
Klebsiella_oxytoca_E718 3 3
Klebsiella_variicola_At-22 2 2
Klebsiella_pneumoniae_NTUH-K2044 2 2
Enterobacter_aerogenes_KCTC_2190 2 2
Escherichia_fergusonii_ATCC_35469 1 1
Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 1 1
Enterobacter_sp._R4-368 2 2
Enterobacter_sp._638 1 1
Enterobacter_asburiae_LF7a 2 2
Enterobacter_cloacae_subsp._dissolvens_SDM 2 2
Citrobacter_rodentium_ICC168 2 2
Citrobacter_koseri_ATCC_BAA-895 1 1
Pseudomonas_sp._TKP 2 2
Pseudomonas_sp._UW4 1 1
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 1 1
Pseudomonas_entomophila_L48 1 1
Pseudomonas_syringae_pv._tomato_str._DC3000 3 3
Pseudomonas_stutzeri_A1501 1 1
Pseudomonas_putida_F1 1 1
Pseudomonas_protegens_Pf-5 1 1
Pseudomonas_fluorescens_SBW25 1 1
Pseudomonas_mendocina_ymp 1 1
Pseudomonas_aeruginosa_UCBPP-PA14 1 1
Pseudomonas_sp._VLB120 2 2
Acidilobus_saccharovorans_345-15 1 1
Ignisphaera_aggregans_DSM_17230 3 3
Sulfolobus_islandicus_Y.N.15.51 1 1
Sulfolobus_solfataricus_P2 1 1
Thermofilum_sp._1910b 1 1
Thermofilum_pendens_Hrk_5 1 1
Caldivirga_maquilingensis_IC-167 2 2
Methanocella_arvoryzae_MRE50 1 1
Methanocella_paludicola_SANAE 1 1
Salinarchaeum_sp._Harcht-Bsk1 3 3
Halopiger_xanaduensis_SH-6 9 8
Haloterrigena_turkmenica_DSM_5511 2 2
Natrinema_sp._J7-2 1 1
Halogeometricum_borinquense_DSM_11551 1 1
Haloferax_mediterranei_ATCC_33500 1 1
Haloferax_volcanii_DS2 3 3
Halorhabdus_utahensis_DSM_12940 7 7
Haloarcula_hispanica_ATCC_33960 3 3
Haloarcula_marismortui_ATCC_43049 2 2
Halalkalicoccus_jeotgali_B3 2 2
Acholeplasma_laidlawii_PG-8A 2 2

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   1 1
Cryptococcus_neoformans_var._grubii_H99_ 7 7
Cryptococcus_neoformans_B-3501A_ 3 3
Cryptococcus_neoformans_JEC21_ 2 2
Paracoccidioides_brasiliensis_Pb01_ 3 3
Paracoccidioides_brasiliensis_Pb03_ 3 3
Coccidioides_posadasii_str._Silveira_ 3 3
Coccidioides_immitis_RMSCC_3703_ 3 3
Coccidioides_immitis_RMSCC_2394_ 3 3
Coccidioides_immitis_H538.4_ 3 3
Ajellomyces_dermatitidis_ER-3_ 3 3
Histoplasma_capsulatum_H143 3 3
Histoplasma_capsulatum_H88 3 3
Histoplasma_capsulatum_G186AR 3 3
Aspergillus_fumigatus_A1163_ 15 15
Candida_albicans_WO-1_ 2 2
Schizosaccharomyces_pombe_972h-_ 1 1
Batrachochytrium_dendrobatidis_JAM81_ 1 1
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   21 21
Hordeum_vulgare_22   (Domesticated barley)   41 41
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   15 15
Cyanobium_gracile_PCC_6307 1 1
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 1 1
Frankia_sp._EuI1c 3 3
Nocardiopsis_alba_ATCC_BAA-2165 2 2
Streptomyces_albus_J1074 3 3
Streptomyces_rapamycinicus_NRRL_5491 8 8
Streptomyces_davawensis_JCM_4913 7 7
Streptomyces_fulvissimus_DSM_40593 5 5
Streptomyces_venezuelae_ATCC_10712 5 5
Streptomyces_collinus_Tu_365 4 4
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1 1
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 4 4
Saccharothrix_espanaensis_DSM_44229 4 4
Amycolatopsis_mediterranei_RB 12 12
Amycolatopsis_mediterranei_S699 12 12
Amycolatopsis_mediterranei_S699 12 12
Amycolatopsis_orientalis_HCCB10007 3 3
Propionibacterium_avidum_44067 1 1
Propionibacterium_acnes_ATCC_11828 2 2
Propionibacterium_acnes_TypeIA2_P.acn31 1 1
Propionibacterium_acnes_TypeIA2_P.acn17 1 1
Propionibacterium_acnes_TypeIA2_P.acn33 1 1
Propionibacterium_acnes_C1 1 1
Propionibacterium_acnes_HL096PA1 1 1
Propionibacterium_acnes_6609 1 1
Propionibacterium_acnes_266 1 1
Propionibacterium_acnes_KPA171202 1 1
Propionibacterium_acidipropionici_ATCC_4875 4 4
Actinoplanes_friuliensis_DSM_7358 6 6
Rhodococcus_pyridinivorans_SB3094 1 1
Rhodococcus_erythropolis_CCM2595 1 1
Nocardia_brasiliensis_ATCC_700358 1 1
Mycobacterium_sp._MOTT36Y 1 1
Mycobacterium_yongonense_05-1390 1 1
Mycobacterium_intracellulare_MOTT-64 1 1
Mycobacterium_indicus_pranii_MTCC_9506 1 1
Mycobacterium_intracellulare_MOTT-02 1 1
Mycobacterium_avium_subsp._paratuberculosis_MAP4 1 1
Mycobacterium_avium_subsp._paratuberculosis_K-10 1 1
Mycobacterium_canettii_CIPT_140070017 1 1
Mycobacterium_canettii_CIPT_140060008 1 1
Mycobacterium_canettii_CIPT_140070008 1 1
Mycobacterium_canettii_CIPT_140070010 1 1
Mycobacterium_tuberculosis_EAI5/NITR206 1 1
Mycobacterium_tuberculosis_EAI5 1 1
Mycobacterium_tuberculosis_CAS/NITR204 1 1
Mycobacterium_tuberculosis_str._Beijing/NITR203 1 1
Mycobacterium_tuberculosis_UT205 1 1
Mycobacterium_tuberculosis_RGTB423 1 1
Mycobacterium_tuberculosis_RGTB327 1 1
Mycobacterium_tuberculosis_CTRI-2 1 1
Mycobacterium_tuberculosis_str._Erdman_=_ATCC_35801 1 1
Mycobacterium_tuberculosis_KZN_605 1 1
Mycobacterium_tuberculosis_KZN_4207 1 1
Mycobacterium_tuberculosis_CCDC5180 1 1
Mycobacterium_tuberculosis_CCDC5079 1 1
Mycobacterium_tuberculosis_CCDC5079 1 1
Mycobacterium_tuberculosis_H37Ra 1 1
Mycobacterium_tuberculosis_str._Haarlem/NITR202 1 1
Mycobacterium_tuberculosis_str._Haarlem 1 1
Mycobacterium_tuberculosis_F11 1 1
Mycobacterium_tuberculosis_H37Rv 1 1
Mycobacterium_tuberculosis_CDC1551 1 1
Mycobacterium_bovis_AF2122/97 1 1
Mycobacterium_bovis_BCG_str._Korea_1168P 1 1
Mycobacterium_bovis_BCG_str._Mexico 1 1
Mycobacterium_bovis_BCG_str._Tokyo_172 1 1
Mycobacterium_smegmatis_str._MC2_155 2 2
Mycobacterium_kansasii_ATCC_12478 2 2
Corynebacterium_maris_DSM_45190 2 2
Corynebacterium_halotolerans_YIM_70093_=_DSM_44683 1 1
Corynebacterium_terpenotabidum_Y-11 1 1
Corynebacterium_glutamicum_SCgG2 1 1
Corynebacterium_glutamicum_SCgG1 1 1
Corynebacterium_glutamicum_ATCC_13032 1 1
Corynebacterium_glutamicum_ATCC_13032 1 1
Corynebacterium_glutamicum_ATCC_13032 1 1
Leifsonia_xyli_subsp._cynodontis_DSM_46306 2 2
Clavibacter_michiganensis_subsp._sepedonicus 4 4
Clavibacter_michiganensis_subsp._nebraskensis_NCPPB_2581 3 3
Bifidobacterium_longum_NCC2705 2 2
Bifidobacterium_longum_DJO10A 2 2
Bifidobacterium_longum_subsp._infantis_157F 4 4
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 1 1
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 1 1
Bifidobacterium_longum_subsp._longum_KACC_91563 3 3
Bifidobacterium_longum_subsp._longum_BBMN68 3 3
Bifidobacterium_longum_subsp._longum_F8 4 4
Bifidobacterium_longum_subsp._longum_JCM_1217 2 2
Bifidobacterium_thermophilum_RBL67 1 1
Bifidobacterium_animalis_subsp._animalis_ATCC_25527 1 1
Bifidobacterium_animalis_subsp._lactis_Bl12 2 2
Bifidobacterium_animalis_subsp._lactis_B420 2 2
Bifidobacterium_animalis_subsp._lactis_ATCC_27673 1 1
Bifidobacterium_animalis_subsp._lactis_BLC1 2 2
Bifidobacterium_animalis_subsp._lactis_CNCM_I-2494 2 2
Bifidobacterium_animalis_subsp._lactis_Bi-07 2 2
Bifidobacterium_animalis_subsp._lactis_V9 2 2
Bifidobacterium_animalis_subsp._lactis_DSM_10140 2 2
Bifidobacterium_animalis_subsp._lactis_BB-12 2 2
Bifidobacterium_animalis_subsp._lactis_AD011 2 2
Bifidobacterium_breve_UCC2003 3 3
Bifidobacterium_asteroides_PRL2011 4 4
Actinomyces_graevenitzii_C83_ 1 1
Actinomyces_odontolyticus_ATCC_17982 2 2
Actinomyces_viscosus_C505 1 1
Chthonomonas_calidirosea_T49 1 1
Deinococcus_peraridilitoris_DSM_19664 2 2
Eubacterium_siraeum_V10Sc8a 3 3
Clostridium_thermocellum_DSM_1313 1 1
[Clostridium]_stercorarium_Clostridiu_subsp._stercorarium_DSM_8532 4 4
Faecalibacterium_prausnitzii_L2-6 2 2
Ruminococcus_champanellensis_18P13 1 1
Sulfobacillus_acidophilus_TPY 1 1
Roseburia_intestinalis_XB6B4 17 17
Clostridium_saccharobutylicum_DSM_13864 2 2
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 7 7
Clostridium_perfringens_str._13 1 1
Clostridium_acetobutylicum_DSM_1731 2 2
Clostridium_acetobutylicum_EA_2018 2 2
Thermoanaerobacterium_thermosaccharolyticum_M0795 1 1
Thermoanaerobacter_sp._X513 1 1
Halobacteroides_halobius_DSM_5150 1 1
Carnobacterium_maltaromaticum_LMA28 6 6
Enterococcus_casseliflavus_EC20 3 3
Enterococcus_faecalis_str._Symbioflor_1 1 1
Enterococcus_faecalis_D32 1 1
Enterococcus_faecalis_OG1RF 1 1
Enterococcus_faecalis_V583 1 1
Leuconostoc_mesenteroides_subsp._mesenteroides_J18 1 1
Lactobacillus_paracasei_subsp._paracasei_8700:2 1 1
Lactobacillus_casei_LOCK919 1 1
Lactobacillus_casei_W56 1 1
Lactobacillus_casei_LC2W 1 1
Lactobacillus_casei_BD-II 1 1
Lactobacillus_casei_BL23 1 1
Lactobacillus_casei_str._Zhang 1 1
Lactobacillus_rhamnosus_LOCK908 1 1
Lactobacillus_rhamnosus_LOCK900 1 1
Lactobacillus_rhamnosus_ATCC_8530 1 1
Lactobacillus_rhamnosus_GG 1 1
Lactobacillus_rhamnosus_GG 1 1
Lactobacillus_brevis_KB290 2 2
Lactococcus_lactis_subsp._cremoris_NZ9000 1 1
Streptococcus_suis_T15 2 2
Streptococcus_suis_SC070731 2 2
Streptococcus_suis_S735 2 2
Streptococcus_suis_SS12 2 2
Streptococcus_suis_ST1 2 2
Streptococcus_suis_A7 2 2
Streptococcus_suis_JS14 2 2
Streptococcus_suis_BM407 2 2
Streptococcus_suis_SC84 2 2
Streptococcus_suis_GZ1 2 2
Streptococcus_suis_98HAH33 2 2
Streptococcus_suis_05ZYH33 2 2
Exiguobacterium_antarcticum_B7 2 2
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_Tc-4-1 2 2
Thermobacillus_composti_KWC4 6 6
Paenibacillus_sp._Y412MC10 9 9
Paenibacillus_mucilaginosus_KNP414 6 6
Paenibacillus_mucilaginosus_K02 6 6
Paenibacillus_larvae_subsp._larvae_DSM_25430 1 1
Paenibacillus_polymyxa_CR1 7 7
Paenibacillus_polymyxa_SC2 4 4
Paenibacillus_polymyxa_E681 3 3
Listeria_monocytogenes_EGD_sequence 2 2
Listeria_monocytogenes_N53-1 2 2
Listeria_monocytogenes_La111 2 2
Listeria_monocytogenes_serotype_4b_str._LL195 2 2
Listeria_monocytogenes_07PF0776 2 2
Listeria_monocytogenes_M7 2 2
Listeria_monocytogenes_J1-220 2 2
Listeria_monocytogenes_J1816 2 2
Listeria_monocytogenes_SLCC2376 2 2
Listeria_monocytogenes_SLCC5850 2 2
Listeria_monocytogenes_ATCC_19117 2 2
Listeria_monocytogenes_L312 2 2
Listeria_monocytogenes_SLCC2479 2 2
Listeria_monocytogenes_SLCC7179 2 2
Listeria_monocytogenes_SLCC2540 2 2
Listeria_monocytogenes_SLCC2378 2 2
Listeria_monocytogenes_serotype_1/2b_str._SLCC2755 2 2
Listeria_monocytogenes_serotype_1/2c_str._SLCC2372 2 2
Listeria_monocytogenes_serotype_7_str._SLCC2482 2 2
Listeria_monocytogenes_08-5578 2 2
Listeria_monocytogenes_08-5923 2 2
Listeria_monocytogenes_L99 2 2
Listeria_monocytogenes_HCC23 2 2
Listeria_monocytogenes_10403S 2 2
Listeria_monocytogenes_J0161 2 2
Listeria_monocytogenes_Finland_1998 2 2
Listeria_monocytogenes_FSL_R2-561 2 2
Listeria_monocytogenes_serotype_4b_str._F2365 2 2
Listeria_monocytogenes_EGD-e 2 2
Geobacillus_sp._Y4.1MC1 1 1
Amphibacillus_xylanus_NBRC_15112 4 4
Bacillus_amyloliquefaciens_subsp._plantarum_sequencing 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5033 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_YAU_B9601-Y2 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5113 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5036 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_CAU_B946 1 1
Bacillus_amyloliquefaciens_LFB112 1 1
Bacillus_amyloliquefaciens_CC178 1 1
Bacillus_amyloliquefaciens_Y2 1 1
Bacillus_amyloliquefaciens_IT-45 1 1
Bacillus_amyloliquefaciens_XH7 1 1
Bacillus_amyloliquefaciens_LL3 1 1
Bacillus_amyloliquefaciens_TA208 1 1
Bacillus_amyloliquefaciens_DSM_7 1 1
Bacillus_licheniformis_9945A 2 2
Bacillus_subtilis_PY79 1 1
Bacillus_subtilis_XF-1 1 1
Bacillus_subtilis_QB928 1 1
Bacillus_subtilis_BSn5 1 1
Bacillus_subtilis_subsp._subtilis_str._BAB-1 1 1
Bacillus_subtilis_subsp._subtilis_str._BSP1 1 1
Bacillus_subtilis_subsp._subtilis_str._RO-NN-1 1 1
Bacillus_subtilis_subsp._subtilis_6051-HGW 1 1
Bacillus_subtilis_subsp._spizizenii_TU-B-10 1 1
Bacillus_subtilis_subsp._spizizenii_str._W23 1 1
Bacillus_subtilis_subsp._natto_BEST195 1 1
Bacillus_licheniformis_DSM_13_=_ATCC_14580 2 2
Bacillus_infantis_NRRL_B-14911 2 2
Bacillus_toyonensis_BCT-7112 1 1
Bacillus_thuringiensis_MC28 1 1
Bacillus_coagulans_36D1 1 1
Chlorobium_phaeobacteroides_BS1 1 1
Salinibacter_ruber_DSM_13855 2 2
Rhodothermus_marinus_SG0.5JP17-172 5 5
Echinicola_vietnamensis_DSM_17526 5 5
Emticicia_oligotrophica_DSM_17448 4 4
Prevotella_dentalis_DSM_3688 4 4
Alistipes_shahii_WAL_8301 6 6
Bacteroides_xylanisolvens_XB1A 12 12
Bacteroides_fragilis_638R 7 7
Bacteroides_fragilis_NCTC_9343 7 7
Nonlabens_dokdonensis_DSW-6 1 1
Psychroflexus_torquis_ATCC_700755 2 2
Riemerella_anatipestifer_RA-CH-2 1 1
Riemerella_anatipestifer_RA-CH-1 1 1
Riemerella_anatipestifer_RA-GD 1 1
Riemerella_anatipestifer_ATCC_11845_=_DSM_15868 1 1
Fibrobacter_succinogenes_subsp._succinogenes_S85 1 1
Spirochaeta_thermophila_DSM_6578 5 5
Thermotoga_maritima_MSB8 2 2
Sorangium_cellulosum_So0157-2 5 5
Pandoraea_pnomenusa_3kgm 1 1
Ralstonia_solanacearum_FQY_4 1 1
Ralstonia_solanacearum_PSI07 1 1
Ralstonia_solanacearum_GMI1000 1 1
Burkholderia_sp._KJ006 1 1
Burkholderia_thailandensis_MSMB121 3 3
Burkholderia_pseudomallei_MSHR305 3 3
Burkholderia_pseudomallei_NCTC_13179 2 2
Burkholderia_pseudomallei_BPC006 3 3
Burkholderia_pseudomallei_1026b 2 2
Burkholderia_pseudomallei_MSHR346 2 2
Burkholderia_pseudomallei_668 4 4
Burkholderia_pseudomallei_1710b 3 3
Burkholderia_pseudomallei_K96243 2 2
Burkholderia_mallei_NCTC_10229 2 2
Burkholderia_lata 2 2
Burkholderia_ambifaria_MC40-6 2 2
Burkholderia_cenocepacia_MC0-3 2 2
Burkholderia_cenocepacia_AU_1054 2 2
Burkholderia_cenocepacia_J2315 2 2
Burkholderia_multivorans_ATCC_17616 1 1
Burkholderia_cepacia_GG4 2 2
Candidatus_Symbiobacter_mobilis_Comamonadaceae_bacterium_CR 1 1
Variovorax_paradoxus_B4 1 1
Variovorax_paradoxus_EPS 1 1
Caulobacter_crescentus_CB15 6 6
Rhodospirillum_rubrum_ATCC_11170 1 1
Gluconacetobacter_diazotrophicus_PAl_5 1 1
Micavibrio_aeruginosavorus_EPB 1 1
Methylobacterium_extorquens_DM4 1 1
Methylobacterium_extorquens_PA1 1 1
Rhizobium_etli_CFN_42 2 2
Rhizobium_etli_bv._mimosae_str._Mim1 1 1
Rhizobium_tropici_CIAT_899 3 3
Rhizobium_leguminosarum_bv._trifolii_WSM2304 1 1
Rhizobium_leguminosarum_bv._trifolii_WSM1325 1 1
Rhodopseudomonas_palustris_BisB18 1 1
Simiduia_agarivorans_SA1_=_DSM_21679 3 3
Aeromonas_hydrophila_ML09-119 1 1
Vibrio_sp._EJY3 2 2
Vibrio_anguillarum_Listonella_anguillarum_M3 1 1
Vibrio_vulnificus_CMCP6 1 1
Vibrio_vulnificus_YJ016 1 1
Shewanella_baltica_BA175 1 1
Shewanella_baltica_OS678 1 1
Shewanella_baltica_OS117 1 1
Shewanella_baltica_OS223 1 1
Shewanella_baltica_OS195 1 1
Shewanella_baltica_OS155 1 1
Glaciecola_psychrophila_170 5 5
Alteromonas_macleodii_str._'Ionian_Sea_UM4b' 2 2
Alteromonas_macleodii_str._'Ionian_Sea_UM7' 2 2
Alteromonas_macleodii_str._'Ionian_Sea_U8' 1 1
Alteromonas_macleodii_str._'Ionian_Sea_U7' 1 1
Alteromonas_macleodii_str._'Ionian_Sea_U4' 1 1
Alteromonas_macleodii_str._'Aegean_Sea_MED64' 1 1
Alteromonas_macleodii_AltDE1 2 2
Alteromonas_macleodii_str._'English_Channel_673' 1 1
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 1 1
Alteromonas_macleodii_str._'Black_Sea_11' 2 2
Alteromonas_macleodii_ATCC_27126 2 2
Stenotrophomonas_maltophilia_D457 4 4
Stenotrophomonas_maltophilia_JV3 2 2
Stenotrophomonas_maltophilia_R551-3 2 2
Xylella_fastidiosa_subsp._fastidiosa_GB514 1 1
Xylella_fastidiosa_M12 3 3
Xylella_fastidiosa_Temecula1 2 2
Xylella_fastidiosa_9a5c 2 2
Xanthomonas_citri_subsp._citri_Aw12879 5 5
Xanthomonas_campestris_pv._vesicatoria_str._85-10 5 5
Xanthomonas_axonopodis_pv._citrumelo_F1 5 5
Xanthomonas_axonopodis_Xac29-1 5 5
Xanthomonas_oryzae_pv._oryzicola_BLS256 5 5
Xanthomonas_oryzae_pv._oryzae_MAFF_311018 5 5
Xanthomonas_oryzae_pv._oryzae_KACC_10331 5 5
Xanthomonas_campestris_pv._raphani_756C 6 6
Xanthomonas_campestris_pv._campestris_str._8004 6 6
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 6 6
Edwardsiella_tarda_C07-087 3 3
Edwardsiella_tarda_FL6-60 3 3
Rahnella_aquatilis_HX2 3 3
Yersinia_pseudotuberculosis_PB1/+ 2 2
Yersinia_pseudotuberculosis_YPIII 2 2
Yersinia_pseudotuberculosis_IP_32953 2 2
Yersinia_pestis_biovar_Microtus_str._91001 2 2
Yersinia_pestis_A1122 2 2
Yersinia_pestis_Z176003 2 2
Yersinia_pestis_D182038 2 2
Yersinia_pestis_D106004 2 2
Yersinia_pestis_biovar_Medievalis_str._Harbin_35 2 2
Yersinia_pestis_Nepal516 2 2
Yersinia_pestis_Antiqua 2 2
Yersinia_pestis_CO92 2 2
Yersinia_pestis_KIM10+ 2 2
Serratia_sp._AS13 1 1
Serratia_plymuthica_4Rx13 1 1
Serratia_marcescens_FGI94 1 1
Serratia_marcescens_WW4 2 2
Serratia_liquefaciens_ATCC_27592 1 1
Dickeya_dadantii_Ech586 2 2
Dickeya_dadantii_3937 2 2
Pectobacterium_carotovorum_subsp._carotovorum_PCC21 1 1
Pantoea_ananatis_LMG_5342 2 2
Pantoea_ananatis_PA13 2 2
Pantoea_ananatis_AJ13355 2 2
Erwinia_pyrifoliae_DSM_12163 1 1
Erwinia_amylovora_CFBP1430 1 1
Cronobacter_sakazakii_CMCC_45402 2 2
Cronobacter_sakazakii_SP291 2 2
Cronobacter_sakazakii_ATCC_BAA-894 2 2
Raoultella_ornithinolytica_B6 2 2
Shigella_sonnei_53G 1 1
Shigella_flexneri_2002017 1 1
Shigella_flexneri_2a_str._2457T 1 1
Shigella_flexneri_2a_str._301 1 1
Shigella_dysenteriae_1617 1 1
Shigella_boydii_Sb227 1 1
Salmonella_bongori_N268-08 1 1
Salmonella_enterica_subsp._arizonae_serovar_62:z4,z23:--_str._RSK2980 1 1
Salmonella_enterica_subsp._enterica_serovar_4,[5],12:i:-_str._08-1736 1 1
Salmonella_enterica_subsp._enterica_serovar_Javiana_str._CFSAN001992 1 1
Salmonella_enterica_subsp._enterica_serovar_Schwarzengrund_str._CVM19633 1 1
Salmonella_enterica_subsp._enterica_Serovar_Cubana_str._CFSAN002050 1 1
Salmonella_enterica_subsp._enterica_serovar_Enteritidis_str._P125109 1 1
Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67 1 1
Salmonella_enterica_subsp._enterica_serovar_Newport_str._USMARC-S3124.1 1 1
Salmonella_enterica_subsp._enterica_serovar_Newport_str._SL254 1 1
Salmonella_enterica_subsp._enterica_serovar_Dublin_str._CT_02021853 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_var._5-_str._CFSAN001921 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._U288 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._798 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._UK-1 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._ST4/74 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._T000240 1 1
Salmonella_enterica_The_genome_of__subsp._enterica_serovar_Typhimurium_str._DT2 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._D23580 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._14028S 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_Definitive_Type_104 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._P-stx-12 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty21a 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2 1 1
Salmonella_enterica_serovar_Bovismorbificans_genomics 1 1
Salmonella_enterica_subsp._enterica_serovar_Bareilly_str._CFSAN000189 1 1
Salmonella_enterica_subsp._enterica_serovar_Agona_str._24249 1 1
Salmonella_enterica_subsp._enterica_serovar_Agona_str._SL483 1 1
Salmonella_enterica_subsp._enterica_serovar_Weltevreden_str._2007-60-3289-1 1 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_B_str._SPB7 1 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._AKU_12601 1 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._ATCC_9150 1 1
Salmonella_enterica_subsp._enterica_Serovar_Heidelberg_str._CFSAN002069 1 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._B182 1 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._41578 1 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._SL476 1 1
Salmonella_enterica_subsp._enterica_serovar_Pullorum_str._S06004 1 1
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._CDC1983-67 1 1
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._RKS5078 1 1
Salmonella_enterica_subsp._enterica_serovar_Thompson_str._RM6836 1 1
Salmonella_enterica_subsp._enterica_serovar_Gallinarum_str._287/91 1 1
Klebsiella_oxytoca_KCTC_1686 3 3
Klebsiella_pneumoniae_JM45 1 1
Klebsiella_pneumoniae_CG43 1 1
Klebsiella_pneumoniae_KCTC_2242 1 1
Klebsiella_pneumoniae_342 2 2
Klebsiella_pneumoniae_subsp._pneumoniae_1084 2 2
Klebsiella_pneumoniae_subsp._pneumoniae_HS11286 1 1
Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578 1 1
Klebsiella_pneumoniae_subsp._rhinoscleromatis_SB3432 1 1
Enterobacter_aerogenes_EA1509E 2 2
Escherichia_coli_E24377A 1 1
Escherichia_coli_E._coli_PMV-1 1 1
Escherichia_coli_JJ1886 1 1
Escherichia_coli_LY180 1 1
Escherichia_coli_APEC_O78 1 1
Escherichia_coli_O7:K1_str._CE10 1 1
Escherichia_coli_O104:H4_str._2009EL-2050 1 1
Escherichia_coli_O104:H4_str._2009EL-2071 1 1
Escherichia_coli_O104:H4_str._2011C-3493 1 1
Escherichia_coli_NA114 1 1
Escherichia_coli_P12b 1 1
Escherichia_coli_str._'clone_D_i2' 1 1
Escherichia_coli_str._'clone_D_i14' 1 1
Escherichia_coli_UM146 1 1
Escherichia_coli_042 1 1
Escherichia_coli_Xuzhou21 1 1
Escherichia_coli_IHE3034 1 1
Escherichia_coli_UMNK88 1 1
Escherichia_coli_O83:H1_str._NRG_857C 1 1
Escherichia_coli_ABU_83972 1 1
Escherichia_coli_KO11FL 1 1
Escherichia_coli_KO11FL 1 1
Escherichia_coli_LF82 1 1
Escherichia_coli_ED1a 1 1
Escherichia_coli_IAI39 1 1
Escherichia_coli_UMN026 1 1
Escherichia_coli_55989 1 1
Escherichia_coli_S88 1 1
Escherichia_coli_IAI1 1 1
Escherichia_coli_W 1 1
Escherichia_coli_W 1 1
Escherichia_coli_DH1 1 1
Escherichia_coli_DH1 1 1
Escherichia_coli_ATCC_8739 1 1
Escherichia_coli_BL21(DE3) 1 1
Escherichia_coli_BL21(DE3) 1 1
Escherichia_coli_SMS-3-5 1 1
Escherichia_coli_SE15 1 1
Escherichia_coli_SE11 1 1
Escherichia_coli_APEC_O1 1 1
Escherichia_coli_O103:H2_str._12009 1 1
Escherichia_coli_UTI89 1 1
Escherichia_coli_536 1 1
Escherichia_coli_HS 1 1
Escherichia_coli_ETEC_H10407 1 1
Escherichia_coli_O55:H7_str._RM12579 1 1
Escherichia_coli_O55:H7_str._CB9615 1 1
Escherichia_coli_O26:H11_str._11368 1 1
Escherichia_coli_CFT073 1 1
Escherichia_coli_O111:H-_str._11128 1 1
Escherichia_coli_O127:H6_str._E2348/69 1 1
Escherichia_coli_O157:H7_str._TW14359 1 1
Escherichia_coli_O157:H7_str._EC4115 1 1
Escherichia_coli_O157:H7_str._Sakai 1 1
Escherichia_coli_O157:H7_str._EDL933 1 1
Escherichia_coli_str._K-12_substr._MDS42 1 1
Escherichia_coli_BW2952 1 1
Escherichia_coli_str._K-12_substr._MG1655 1 1
Escherichia_coli_str._K-12_substr._W3110 1 1
Escherichia_coli_str._K-12_substr._DH10B 1 1
Escherichia_coli_B_str._REL606 1 1
Enterobacter_cloacae_SCF1 1 1
Enterobacter_cloacae_EcWSU1 2 2
Enterobacter_cloacae_subsp._cloacae_ENHKU01 1 1
Enterobacter_cloacae_subsp._cloacae_NCTC_9394 1 1
Enterobacter_cloacae_subsp._cloacae_ATCC_13047 2 2
Pseudomonas_denitrificans_ATCC_13867 1 1
Pseudomonas_syringae_pv._phaseolicola_1448A 3 3
Pseudomonas_syringae_pv._syringae_B728a 3 3
Pseudomonas_stutzeri_CCUG_29243 1 1
Pseudomonas_stutzeri_DSM_10701 1 1
Pseudomonas_stutzeri_DSM_4166 1 1
Pseudomonas_stutzeri_RCH2 1 1
Pseudomonas_stutzeri_ATCC_17588_=_LMG_11199 1 1
Pseudomonas_monteilii_SB3101 1 1
Pseudomonas_monteilii_SB3078 1 1
Pseudomonas_putida_H8234 1 1
Pseudomonas_putida_HB3267 1 1
Pseudomonas_putida_NBRC_14164 1 1
Pseudomonas_putida_DOT-T1E 1 1
Pseudomonas_putida_S16 1 1
Pseudomonas_putida_BIRD-1 1 1
Pseudomonas_putida_W619 2 2
Pseudomonas_putida_ND6 1 1
Pseudomonas_putida_KT2440 1 1
Pseudomonas_putida_GB-1 1 1
Pseudomonas_protegens_CHA0 1 1
Pseudomonas_poae_RE*1-1-14 1 1
Pseudomonas_fluorescens_F113 2 2
Pseudomonas_fluorescens_A506 1 1
Pseudomonas_fluorescens_R124 1 1
Pseudomonas_fluorescens_Pf0-1 1 1
Pseudomonas_mendocina_NK-01 1 1
Pseudomonas_aeruginosa_SCV20265 1 1
Pseudomonas_aeruginosa_MTB-1 1 1
Pseudomonas_aeruginosa_LES431 1 1
Pseudomonas_aeruginosa_B136-33 1 1
Pseudomonas_aeruginosa_PA1R 1 1
Pseudomonas_aeruginosa_PA1 1 1
Pseudomonas_aeruginosa_DK2 1 1
Pseudomonas_aeruginosa_NCGM2.S1 1 1
Pseudomonas_aeruginosa_M18 1 1
Pseudomonas_aeruginosa_LESB58 1 1
Pseudomonas_aeruginosa_PA7 1 1
Pseudomonas_aeruginosa_PAO1 1 1
Sulfolobus_islandicus_LAL14/1 1 1
Sulfolobus_islandicus_REY15A 1 1
Sulfolobus_islandicus_HVE10/4 1 1
Sulfolobus_islandicus_Y.G.57.14 1 1
Sulfolobus_islandicus_L.S.2.15 1 1
Sulfolobus_islandicus_M.16.27 1 1
Sulfolobus_islandicus_M.14.25 1 1
Sulfolobus_islandicus_M.16.4 1 1
Sulfolobus_islandicus_L.D.8.5 1 1
Halovivax_ruber_XH-70 1 1
Natronococcus_occultus_SP4 2 2
Halorhabdus_tiamatea_SARL4B 6 6
Haloarcula_hispanica_N601 3 3

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Longest transcript per gene
Genome     Number   Proteins
Gallus_gallus_69_2   (Chicken)   1 1
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   2 2
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   1 1
Ciona_intestinalis_69   (Vase tunicate)   1 1
Arabidopsis_thaliana_10   (Thale cress)   16 16

Others
Genome     Number   Proteins
Moniliophthora_perniciosa_FA553__(Genome_survey) 18 18
Picea_sitchensis__(Incomplete)   (Sitka spruce)   1 1
Lotus_japonicus__(Early_assembly) 18 18
Malus_x_domestica_(Duplicate)   (Apple)   50 47
Ricinus_communis__(Early_assembly)   (Castor bean)   20 20
Nicotiana_benthamiana_0.4.4_(Early_draft) 41 38
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   17 17
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   18 18
Phoenix_dactylifera__(Early_draft)   (Date palm)   12 12
Acholeplasma_laidlawii_PG-8A_(duplicate) 2 2
Mycobacterium_tuberculosis_H37Rv_(Duplicate_of_ex) 1 1
Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 1 1
NCBI_plasmid_sequences_(Plasmids) 41 40
TargetDB__(Targets) 263 263
STRING_v9.0.5_(STRING) 1352 1349
Uniprot_2018_03_genome 39134 38959
NCBI_2017_08_genome 84787 84643
Protozoadb_2010_08_(Protozoadb) 8 8
Protein_Data_Bank_(all_PDB_sequenc) 136 134
PDB_chains_(SCOP_1.75)_(PDB) 2 2
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 211 211

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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