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Home > SCOP hierarchy > FucI/AraA N-terminal and middle domains > Domain combinations

Domain combinations for FucI/AraA N-terminal and middle domains superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a FucI/AraA N-terminal and middle domains domain in that genome.

Complete genomes
Genome Number Proteins

Adineta_vaga 6 6

Chlorella_variabilis_sp._NC64A_ 1 1

Naegleria_gruberi_ 2 1

Trichomonas_vaginalis_ 1 1

Thermobaculum_terrenum_ATCC_BAA-798 1 1

Conexibacter_woesei_DSM_14684 2 2

Coriobacterium_glomerans_PW2 4 4

Rubrobacter_xylanophilus_DSM_9941 2 2

Acidothermus_cellulolyticus_11B 1 1

Modestobacter_marinus 1 1

Geodermatophilus_obscurus_DSM_43160 1 1

Catenulispora_acidiphila_DSM_44928 1 1

Stackebrandtia_nassauensis_DSM_44728 3 3

Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 1 1

Streptosporangium_roseum_DSM_43021 2 2

Kitasatospora_setae_KM-6054 1 1

Streptomyces_bingchenggensis_BCW-1 1 1

Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1 1

Actinosynnema_mirum_DSM_43827 1 1

Saccharopolyspora_erythraea_NRRL_2338 1 1

Amycolatopsis_mediterranei_U32 2 2

Kribbella_flavida_DSM_17836 1 1

Nocardioides_sp._JS614 1 1

Propionibacterium_propionicum_F0230a 1 1

Propionibacterium_acnes_SK137 2 2

Microlunatus_phosphovorus_NM-1 1 1

Propionibacterium_freudenreichii_subsp._shermanii_CIRM-BIA1 1 1

Verrucosispora_maris_AB-18-032 1 1

Micromonospora_sp._L5 2 2

Micromonospora_aurantiaca_ATCC_27029 1 1

Actinoplanes_sp._N902-109 1 1

Actinoplanes_sp._SE50/110 2 2

Actinoplanes_missouriensis_431 2 2

Rhodococcus_jostii_RHA1 1 1

Amycolicicoccus_subflavus_DQS3-9A1 1 1

Mycobacterium_smegmatis_str._MC2_155 1 1

Sanguibacter_keddieii_DSM_10542 1 1

Beutenbergia_cavernae_DSM_12333 2 2

Microbacterium_testaceum_StLB037 1 1

Clavibacter_michiganensis_subsp._michiganensis_NCPPB_382 1 1

Jonesia_denitrificans_DSM_20603 1 1

Brachybacterium_faecium_DSM_4810 1 1

Isoptericola_variabilis_225 1 1

Xylanimonas_cellulosilytica_DSM_15894 1 1

Cellulomonas_flavigena_DSM_20109 1 1

Cellulomonas_fimi_ATCC_484 1 1

[Cellvibrio]_gilvus_ATCC_13127 1 1

Arthrobacter_phenanthrenivorans_Sphe3 1 1

Arthrobacter_chlorophenolicus_A6 1 1

Arthrobacter_aurescens_TC1 1 1

Arthrobacter_arilaitensis_Re117 1 1

Arthrobacter_sp._Rue61a 1 1

Arthrobacter_sp._FB24 1 1

Bifidobacterium_longum_subsp._longum_JDM301 1 1

Bifidobacterium_animalis_subsp._lactis_Bl-04 1 1

Bifidobacterium_dentium_Bd1 1 1

Bifidobacterium_adolescentis_ATCC_15703 1 1

Actinomyces_sp._F0330 1 1

Caldilinea_aerophila_DSM_14535_=_NBRC_104270 4 4

Anaerolinea_thermophila_UNI-1 2 2

Herpetosiphon_aurantiacus_DSM_785 1 1

Truepera_radiovictrix_DSM_17093 2 2

Deinococcus_deserti_VCD115 1 1

Deinococcus_maricopensis_DSM_21211 1 1

Meiothermus_silvanus_DSM_9946 1 1

Meiothermus_ruber_DSM_1279 1 1

Megamonas_hypermegale 5 5

Selenomonas_ruminantium_subsp._lactilytica_TAM6421 2 2

Clostridium_clariflavum_DSM_19732 1 1

Eubacterium_siraeum 3 3

Clostridium_cellulolyticum_H10 2 2

Ruminococcus_sp. 3 3

Ruminococcus_albus_7 1 1

Sulfobacillus_acidophilus_DSM_10332 1 1

Oscillibacter_valericigenes_Sjm18-20 2 2

Desulfosporosinus_acidiphilus_SJ4 1 1

Desulfitobacterium_hafniense_Y51 1 1

Desulfotomaculum_ruminis_DSM_2154 1 1

Eubacterium_eligens_ATCC_27750 1 1

Eubacterium_limosum_KIST612 1 1

Clostridium_saccharolyticum_WM1 2 2

Clostridium_phytofermentans_ISDg 3 3

Clostridium_lentocellum_DSM_5427 2 2

[Ruminococcus]_obeum 6 6

[Ruminococcus]_torques 3 3

Eubacterium_rectale_M104/1 1 1

Eubacterium_rectale_ATCC_33656 2 2

Roseburia_hominis_A2-183 2 2

Roseburia_intestinalis 2 2

Butyrivibrio_proteoclasticus_B316 1 1

Butyrivibrio_fibrisolvens 3 3

Clostridium_sp._BNL1100 2 2

Clostridium_ljungdahlii_DSM_13528 1 1

Clostridium_beijerinckii_NCIMB_8052 3 3

Clostridium_perfringens_ATCC_13124 1 1

Clostridium_cellulovorans_743B 3 3

Clostridium_acetobutylicum_ATCC_824 3 3

Mahella_australiensis_50-1_BON 4 4

Caldicellulosiruptor_obsidiansis_OB47 1 1

Caldicellulosiruptor_kronotskyensis_2002 2 2

Caldicellulosiruptor_hydrothermalis_108 3 3

Caldicellulosiruptor_owensensis_OL 2 2

Caldicellulosiruptor_saccharolyticus_DSM_8903 2 2

Caldicellulosiruptor_bescii_DSM_6725 2 2

Thermoanaerobacterium_xylanolyticum_LX-11 2 2

Thermoanaerobacterium_thermosaccharolyticum_DSM_571 2 2

Coprothermobacter_proteolyticus_DSM_5265 1 1

Tepidanaerobacter_acetatoxydans_Re1 1 1

Thermoanaerobacter_mathranii_subsp._mathranii_str._A3 2 2

Thermoanaerobacter_italicus_Ab9 1 1

Halothermothrix_orenii_H_168 1 1

Halanaerobium_hydrogeniformans 1 1

Halanaerobium_praevalens_DSM_2228 1 1

Carnobacterium_sp._17-4 1 1

Tetragenococcus_halophilus_NBRC_12172 1 1

Melissococcus_plutonius_DAT561 1 1

Enterococcus_hirae_ATCC_9790 1 1

Enterococcus_faecium_Aus0004 1 1

Weissella_koreensis_KACC_15510 1 1

Leuconostoc_sp._C2 1 1

Leuconostoc_kimchii_IMSNU_11154 1 1

Leuconostoc_citreum_KM20 1 1

Leuconostoc_mesenteroides_subsp._mesenteroides_ATCC_8293 1 1

Leuconostoc_gasicomitatum_LMG_18811 1 1

Lactobacillus_crispatus_ST1 1 1

Lactobacillus_fermentum_IFO_3956 1 1

Lactobacillus_sakei_subsp._sakei_23K 1 1

Lactobacillus_reuteri_DSM_20016 1 1

Lactobacillus_plantarum_JDM1 1 1

Lactobacillus_buchneri_NRRL_B-30929 2 2

Lactobacillus_buchneri 3 3

Lactobacillus_brevis_ATCC_367 1 1

Pediococcus_pentosaceus_ATCC_25745 1 1

Streptococcus_pneumoniae_P1031 1 1

Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_DSM_446 1 1

Paenibacillus_sp._JDR-2 2 2

Paenibacillus_terrae_HPL-003 2 2

Paenibacillus_mucilaginosus_3016 3 3

Paenibacillus_polymyxa_M1 2 2

Bacillus_selenitireducens_MLS10 1 1

Listeria_monocytogenes_serotype_4b_str._CLIP_80459 1 1

Listeria_ivanovii_subsp._ivanovii_PAM_55 2 2

Oceanobacillus_iheyensis_HTE831 1 1

Anoxybacillus_flavithermus_WK1 1 1

Geobacillus_thermoleovorans_CCB_US3_UF5 1 1

Geobacillus_kaustophilus_HTA426 1 1

Geobacillus_sp._GHH01 1 1

Geobacillus_thermodenitrificans_NG80-2 1 1

Bacillus_sp._JS 1 1

Bacillus_amyloliquefaciens_FZB42 1 1

Bacillus_atrophaeus_1942 1 1

Bacillus_subtilis_subsp._subtilis_str._168 1 1

Bacillus_licheniformis_DSM_13_=_ATCC_14580 2 2

Bacillus_halodurans_C-125 1 1

Bacillus_clausii_KSM-K16 1 1

Bacillus_cellulosilyticus_DSM_2522 1 1

Bacillus_pumilus_SAFR-032 1 1

Bacillus_megaterium_DSM_319 1 1

Bacillus_coagulans_2-6 1 1

Melioribacter_roseus_P3M 2 2

Haliscomenobacter_hydrossis_DSM_1100 1 1

Niastella_koreensis_GR20-10 3 3

Chitinophaga_pinensis_DSM_2588 1 1

Rhodothermus_marinus_DSM_4252 1 1

Belliella_baltica_DSM_15883 1 1

Cyclobacterium_marinum_DSM_745 3 3

Fibrella_aestuarina 1 1

Leadbetterella_byssophila_DSM_17132 1 1

Dyadobacter_fermentans_DSM_18053 3 3

Spirosoma_linguale_DSM_74 3 3

Runella_slithyformis_DSM_19594 2 2

Tannerella_forsythia_ATCC_43037 1 1

Paludibacter_propionicigenes_WB4 1 1

Odoribacter_splanchnicus_DSM_20712 1 1

Bacteroides_sp._CF50 2 2

Prevotella_ruminicola_23 4 4

Bacteroides_salanitronis_DSM_18170 2 2

Bacteroides_helcogenes_P_36-108 2 2

Bacteroides_vulgatus_ATCC_8482 4 4

Bacteroides_thetaiotaomicron_VPI-5482 4 4

Bacteroides_fragilis_YCH46 2 2

Pedobacter_saltans_DSM_12145 2 2

Pedobacter_heparinus_DSM_2366 4 4

Sphingobacterium_sp._21 3 3

Zunongwangia_profunda_SM-A87 1 1

Gramella_forsetii_KT0803 1 1

Robiginitalea_biformata_HTCC2501 1 1

Zobellia_galactanivorans 1 1

Muricauda_ruestringensis_DSM_13258 1 1

Flavobacterium_johnsoniae_UW101 1 1

Phycisphaera_mikurensis_NBRC_102666 3 3

Rhodopirellula_baltica_SH_1 1 1

Pirellula_staleyi_DSM_6068 1 1

Coraliomargarita_akajimensis_DSM_45221 1 1

Opitutus_terrae_PB90-1 2 2

Akkermansia_muciniphila_ATCC_BAA-835 1 1

Brachyspira_murdochii_DSM_12563 1 1

Brachyspira_intermedia_PWS/A 1 1

Brachyspira_pilosicoli_95/1000 2 2

Spirochaeta_smaragdinae_DSM_11293 3 3

Sphaerochaeta_pleomorpha_str._Grapes 6 6

Sphaerochaeta_globus_str._Buddy 4 4

Sphaerochaeta_coccoides_DSM_17374 2 2

Spirochaeta_caldaria_DSM_7334 3 3

Treponema_azotonutricium_ZAS-9 3 3

Treponema_brennaborense_DSM_12168 1 1

Treponema_succinifaciens_DSM_2489 1 1

Spirochaeta_africana_DSM_8902 1 1

Spirochaeta_thermophila_DSM_6192 1 1

Petrotoga_mobilis_SJ95 1 1

Mesotoga_prima_MesG1.Ag.4.2 2 2

Fervidobacterium_pennivorans_DSM_9078 1 1

Thermotoga_lettingae_TMO 3 3

Thermotoga_thermarum_DSM_5069 2 2

Thermotoga_sp._RQ2 2 2

Thermotoga_naphthophila_RKU-10 2 2

Thermotoga_petrophila_RKU-1 2 2

Thermotoga_neapolitana_DSM_4359 4 4

Thermotoga_maritima_MSB8 3 3

Dictyoglomus_turgidum_DSM_6724 4 4

Dictyoglomus_thermophilum_H-6-12 3 3

Candidatus_Solibacter_usitatus_Ellin6076 2 2

Granulicella_tundricola_MP5ACTX9 1 1

Granulicella_mallensis_MP5ACTX8 3 3

Candidatus_Koribacter_versatilis_Ellin345 1 1

Terriglobus_saanensis_SP1PR4 2 2

Terriglobus_roseus_DSM_18391 3 3

Acidobacterium_capsulatum_ATCC_51196 1 1

Desulfomonile_tiedjei_DSM_6799 1 1

Sorangium_cellulosum_'So_ce_56' 2 2

Stigmatella_aurantiaca_DW4/3-1 1 1

Leptothrix_cholodnii_SP-6 1 1

Pseudovibrio_sp._FO-BEG1 1 1

Jannaschia_sp._CCS1 1 1

Rhodobacter_capsulatus_SB_1003 1 1

Gluconacetobacter_diazotrophicus_PAl_5 1 1

alpha_proteobacterium_HIMB59 1 1

Rhizobium_leguminosarum_bv._viciae_3841 1 1

Saccharophagus_degradans_2-40 1 1

Cellvibrio_japonicus_Ueda107 1 1

Haemophilus_somnus_129PT 1 1

Gallibacterium_anatis_UMN179 1 1

Haemophilus_parasuis_SH0165 1 1

Haemophilus_influenzae_PittEE 1 1

Actinobacillus_succinogenes_130Z 2 2

Actinobacillus_pleuropneumoniae_serovar_5b_str._L20 1 1

Tolumonas_auensis_DSM_9187 2 2

Aeromonas_salmonicida_subsp._salmonicida_A449 1 1

Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 1 1

Vibrio_parahaemolyticus_RIMD_2210633 1 1

Vibrio_anguillarum_775 1 1

Vibrio_furnissii_NCTC_11218 1 1

Vibrio_vulnificus_MO6-24/O 1 1

Shewanella_sp._MR-4 1 1

Shewanella_putrefaciens_CN-32 1 1

Photorhabdus_asymbiotica 1 1

Proteus_mirabilis_HI4320 1 1

Edwardsiella_tarda_EIB202 1 1

Rahnella_sp._Y9602 1 1

Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 1 1

Yersinia_pseudotuberculosis_IP_31758 2 2

Yersinia_pestis_Pestoides_F 2 2

Yersinia_enterocolitica_subsp._enterocolitica_8081 2 2

Serratia_sp._AS12 1 1

Serratia_sp._ATCC_39006 2 2

Serratia_plymuthica_AS9 1 1

Serratia_proteamaculans_568 1 1

Dickeya_dadantii_Ech703 2 2

Dickeya_zeae_Ech1591 1 1

Pectobacterium_wasabiae_WPP163 1 1

Pectobacterium_sp._SCC3193 1 1

Pectobacterium_atrosepticum_SCRI1043 1 1

Pectobacterium_carotovorum_subsp._carotovorum_PC1 1 1

Sodalis_glossinidius_str._'morsitans' 1 1

Pantoea_sp._At-9b 1 1

Pantoea_vagans_C9-1 2 2

Pantoea_ananatis_LMG_20103 2 2

Erwinia_tasmaniensis_Et1/99 1 1

Erwinia_sp._Ejp617 1 1

Erwinia_billingiae_Eb661 1 1

Erwinia_pyrifoliae_Ep1/96 1 1

Erwinia_amylovora_ATCC_49946 1 1

Escherichia_blattae_DSM_4481 1 1

Cronobacter_turicensis_z3032 1 1

Cronobacter_sakazakii_ES15 1 1

Enterobacteriaceae_bacterium_strain_FGI_57 1 1

Shigella_sonnei_Ss046 1 1

Shigella_flexneri_5_str._8401 2 2

Shigella_dysenteriae_Sd197 2 2

Shigella_boydii_CDC_3083-94 1 1

Salmonella_bongori_NCTC_12419 1 1

Salmonella_enterica_subsp._enterica_serovar_Paratyphi_C_strain_RKS4594 1 1

Klebsiella_oxytoca_E718 3 3

Klebsiella_variicola_At-22 2 2

Klebsiella_pneumoniae_NTUH-K2044 2 2

Enterobacter_aerogenes_KCTC_2190 1 1

Escherichia_fergusonii_ATCC_35469 1 1

Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 2 2

Enterobacter_sp._R4-368 1 1

Enterobacter_sp._638 1 1

Enterobacter_asburiae_LF7a 2 2

Enterobacter_cloacae_subsp._dissolvens_SDM 1 1

Citrobacter_rodentium_ICC168 2 2

Citrobacter_koseri_ATCC_BAA-895 2 2

Pyrolobus_fumarii_1A 2 2

Hyperthermus_butylicus_DSM_5456 1 1

Thermogladius_cellulolyticus_1633 1 1

Ignisphaera_aggregans_DSM_17230 2 2

Aeropyrum_pernix_K1 1 1

Ignicoccus_hospitalis_KIN4/I 1 1

Thermosphaera_aggregans_DSM_11486 1 1

Staphylothermus_hellenicus_DSM_12710 1 1

Staphylothermus_marinus_F1 1 1

Desulfurococcus_kamchatkensis_1221n 1 1

Thermofilum_sp._1910b 1 1

Thermofilum_pendens_Hrk_5 2 2

Vulcanisaeta_moutnovskia_768-28 2 2

Vulcanisaeta_distributa_DSM_14429 2 2

Caldivirga_maquilingensis_IC-167 4 4

Pyrobaculum_sp._1860 2 2

Pyrobaculum_calidifontis_JCM_11548 2 2

Pyrobaculum_arsenaticum_DSM_13514 2 2

Pyrobaculum_oguniense_TE7 2 2

Thermoproteus_neutrophilus_V24Sta 1 1

Pyrobaculum_aerophilum_str._IM2 2 2

Pyrobaculum_islandicum_DSM_4184 1 1

Thermoproteus_uzoniensis_768-20 1 1

Thermoproteus_tenax_Kra_1 2 2

Archaeoglobus_profundus_DSM_5631 1 1

Thermococcus_sp._4557 2 2

Thermococcus_onnurineus_NA1 1 1

Thermococcus_kodakarensis_KOD1 1 1

Thermococcus_gammatolerans_EJ3 2 2

Thermococcus_sibiricus_MM_739 2 2

Thermococcus_barophilus_MP 2 2

Pyrococcus_sp._ST04 1 1

Pyrococcus_horikoshii_OT3 1 1

Pyrococcus_abyssi_GE5 1 1

Pyrococcus_furiosus_COM1 2 2

Halorhabdus_utahensis_DSM_12940 1 1

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Others
Genome Number Proteins

NCBI_plasmid_sequences_(Plasmids) 13 13

TargetDB__(Targets) 30 30

STRING_v9.0.5_(STRING) 379 379

Uniprot_2018_03_genome 10370 10362

NCBI_2017_08_genome 62669 62658

PDB_chains_(SCOP_1.75)_(PDB) 2 2

Protein_Data_Bank_(all_PDB_sequenc) 54 54

NCBI_viral_sequences_(Viral) 2 2

Protozoadb_2010_08_(Protozoadb) 2 2

SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 188 188

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Domain combinations for FucI/AraA N-terminal and middle domains superfamily in groups of genomes