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Home > SCOP hierarchy > Protease propeptides/inhibitors > Domain combinations

Domain combinations for Protease propeptides/inhibitors superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Protease propeptides/inhibitors domain in that genome.

Complete genomes
Genome Number Proteins

Homo_sapiens_76_38 (Human) 57 57

Pan_troglodytes_76_2.1.4 (Chimpanzee) 18 18

Gorilla_gorilla_76_3.1 (Western gorilla) 17 17

Pongo_abelii_76_2 (Sumatran orangutan) 15 15

Nomascus_leucogenys_76_1.0 (Northern white-cheeked gibbon) 15 15

Papio_anubis_76 (Olive baboon) 16 16

Macaca_mulatta_76_1 (Rhesus monkey) 21 21

Callithrix_jacchus_76_3.2.1 (White-tufted-ear marmoset) 30 30

Otolemur_garnettii_76_3 (Small-eared galago) 13 13

Microcebus_murinus_76_1 (Gray mouse lemur) 14 14

Rattus_norvegicus_76_5.0 (Norway rat) 16 16

Mus_musculus_76_38 (House mouse) 28 28

Dipodomys_ordii_76_1 (Ord's kangaroo rat) 13 13

Ictidomys_tridecemlineatus_76_2 (Thirteen-lined ground squirrel) 16 16

Heterocephalus_glaber_v1.7-2 (Naked mole-rat) 12 12

Cavia_porcellus_76_3 (Domestic guinea pig) 15 15

Oryctolagus_cuniculus_76_2 (Rabbit) 15 15

Ochotona_princeps_76 (American pika) 13 13

Tupaia_belangeri_76 (Northern tree shrew) 9 9

Sus_scrofa_76_10.2 (Pig) 19 19

Bos_taurus_76_3.1 (Cattle) 14 14

Ovis_aries_76_3.1 (Sheep) 17 17

Vicugna_pacos_76_1 (Alpaca) 11 11

Tursiops_truncatus_76_1 (Bottlenose dolphin) 15 15

Mustela_putorius_furo_76_1.0 (Domestic ferret) 15 15

Ailuropoda_melanoleuca_76_1 (Giant panda) 15 15

Canis_familiaris_76_3.1 (Dog) 18 18

Felis_catus_76_6.2 (Domestic cat) 13 13

Equus_caballus_76_2 (Horse) 15 14

Myotis_lucifugus_76_2.0 (Little brown bat) 12 12

Pteropus_vampyrus_76_1 (Large flying fox) 14 14

Sorex_araneus_76_1 (European shrew) 8 8

Erinaceus_europaeus_76 (Western European hedgehog) 11 11

Procavia_capensis_76_1 (Cape rock hyrax) 12 12

Loxodonta_africana_76_3 (African savanna elephant) 17 17

Echinops_telfairi_76 (Small Madagascar hedgehog) 12 12

Dasypus_novemcinctus_76_2 (Nine-banded armadillo) 14 14

Choloepus_hoffmanni_76_1 (Hoffmann's two-fingered sloth) 10 10

Macropus_eugenii_76_1.0 (Tammar wallaby) 13 13

Sarcophilus_harrisii_76_7.0 (Tasmanian devil) 17 17

Monodelphis_domestica_76_5 (Gray short-tailed opossum) 15 15

Ornithorhynchus_anatinus_76_5 (Platypus) 10 10

Saccoglossus_kowalevskii_v3.0 79 78

Petromyzon_marinus_76_7.0 (Sea lamprey) 3 3

Meleagris_gallopavo_76_2 (Turkey) 12 12

Gallus_gallus_76_4 (Chicken) 16 16

Anas_platyrhynchos_76_1.0 (Mallard) 13 13

Taeniopygia_guttata_76_3.2.4 (Zebra finch) 12 12

Ficedula_albicollis_76_1.0 (Collared flycatcher) 14 14

Pelodiscus_sinensis_76_1.0 (Chinese soft-shelled turtle) 17 17

Anolis_carolinensis_76_2.0 (Green anole) 15 15

Xenopus_laevis_ (African clawed frog) 57 57

Xenopus_tropicalis_76_4.2 (Tropical clawed frog) 20 20

Latimeria_chalumnae_76_1 (Coelacanth) 12 11

Lepisosteus_oculatus_76 (Spotted gar) 16 16

Gadus_morhua_76_1 (Atlantic cod) 13 13

Tetraodon_nigroviridis_76_8 (Spotted green pufferfish) 19 19

Takifugu_rubripes_76_4 (Torafugu) 38 38

Gasterosteus_aculeatus_76_1 (Three-spined stickleback) 17 17

Oryzias_latipes_76_1 (Japanese medaka) 22 22

Xiphophorus_maculatus_76_4.4.2 (Southern platyfish) 16 16

Poecilia_formosa_76 (Amazon molly) 14 14

Oreochromis_niloticus_76_1.0 (Nile tilapia) 14 14

Astyanax_mexicanus_76 (Mexican tetra) 14 14

Danio_rerio_76_9 (Zebrafish) 24 24

Oikopleura_dioica 11 11

Ciona_savignyi_76_2.0 (Pacific transparent sea squirt) 15 14

Ciona_intestinalis_76 (Vase tunicate) 14 14

Strongylocentrotus_purpuratus_v3.1 (Purple sea urchin) 74 74

Adineta_vaga 22 22

Octopus_bimaculoides_280 8 8

Crassostrea_gigas_22 (Pacific oyster) 7 7

Lottia_gigantea_ (Owl limpet) 6 6

Helobdella_robusta_ 13 13

Capitella_sp._I_ 20 20

Danaus_plexippus_OGS1.0 (Monarch butterfly) 20 20

Heliconius_melpomene_ (Postman butterfly) 19 10

Bombyx_mori_ (Domestic silkworm) 11 10

Nasonia_vitripennis_ (Jewel wasp) 12 12

Apis_mellifera_38.2d_(Not_maintained) (Honey bee) 23 23

Harpegnathos_saltator_v3.3 (Jerdon's jumping ant) 7 7

Linepithema_humile_v1.1 (Argentine ant) 12 10

Pogonomyrmex_barbatus_v1.2 (Red harvester ant) 12 12

Solenopsis_invicta_v.2.2.3 (Red fire ant) 8 8

Acromyrmex_echinatior_v3.8 (Panamanian leafcutter ant) 14 12

Atta_cephalotes_v1.1 10 10

Camponotus_floridanus_v3.3 (Florida carpenter ant) 5 5

Lucilia_cuprina (Australian sheep blowfly) 21 14

Drosophila_grimshawi_1.3 21 21

Drosophila_willistoni_1.3 23 23

Drosophila_pseudoobscura_2.13 22 22

Drosophila_persimilis_1.3 20 20

Drosophila_suzukii 22 17

Drosophila_yakuba_1.3 21 21

Drosophila_simulans_1.3 17 17

Drosophila_sechellia_1.3 18 18

Drosophila_melanogaster_76_5 (Fruit fly) 38 38

Drosophila_erecta_1.3 21 21

Drosophila_ananassae_1.3 20 20

Drosophila_virilis_1.2 22 22

Drosophila_mojavensis_1.3 23 23

Megaselia_scalaris_22 8 8

Aedes_aegypti_55_(Not_maintained) (Yellow fever mosquito) 22 22

Culex_pipiens_quinquefasciatus_ (Southern house mosquito) 23 23

Anopheles_darlingi_22 (American malaria mosquito) 12 12

Anopheles_gambiae_49_3j (African malaria mosquito) 18 18

Tribolium_castaneum_3.0 (Red flour beetle) 13 13

Pediculus_humanus_corporis__(Early_assembly) (Human body louse) 6 6

Acyrthosiphon_pisum_ (Pea aphid) 5 5

Rhodnius_prolixus_22 4 4

Daphnia_pulex_ (Common water flea) 27 26

Strigamia_maritima_22 11 11

Sarcoptes_scabiei 4 4

Tetranychus_urticae_ (Two-spotted spider mite) 8 8

Ixodes_scapularis__(Preliminary) (Black-legged tick) 3 3

Pristionchus_pacificus_ 8 8

Meloidogyne_incognita_ (Southern root-knot nematode) 15 15

Meloidogyne_hapla_ 4 4

Onchocerca_volvulus_22 10 10

Brugia_malayi_WS250 (Agent of lymphatic filariasis) 11 11

Caenorhabditis_japonica_ 11 11

Caenorhabditis_brenneri_ 13 12

Caenorhabditis_remanei_ 11 11

Caenorhabditis_elegans_76_235 (Roundworm) 33 33

Caenorhabditis_briggsae_2 9 9

Trichinella_spiralis_22 5 5

Hymenolepis_microstoma_ 2 2

Echinococcus_multilocularis_ 3 3

Echinococcus_granulosus_ 2 2

Taenia_solium_ (Pork tapeworm) 1 1

Schistosoma_mansoni_ 2 2

Mnemiopsis_leidyi (Sea walnut) 9 8

Thelohanellus_kitauei 1 1

Acropora_digitifera_v1.0 11 11

Nematostella_vectensis_1.0 (Starlet sea anemone) 15 14

Hydra_vulgaris 13 13

Amphimedon_queenslandica 17 16

Trichoplax_adhaerens_ 2 2

Proterospongia_sp._ATCC_50818_ 3 3

Monosiga_brevicollis_ 3 3

Capsaspora_owczarzaki_ATCC_30864_ 8 8

Conidiobolus_coronatus_NRRL28638_v1.0 17 17

Mortierella_verticillata_NRRL_6337_ 20 20

Phycomyces_blakesleeanus_ 3 3

Rhizopus_oryzae_RA_99-880_ 5 5

Mucor_circinelloides_ 1 1

Rhizomucor_miehei_CAU432_ 4 4

Malassezia_globosa_CBS_7966_ 4 4

Sporisorium_reilianum_22 3 3

Ustilago_maydis_ 3 3

Mixia_osmundae_IAM_14324_v1.0 9 9

Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 6 6

Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 9 9

Melampsora_laricis-populina_ 5 5

Rhodotorula_graminis_WP1_v1.0 2 2

Sporobolomyces_roseus_IAM_13481_ 3 3

Microbotryum_violaceum_22 2 2

Wallemia_sebi_v1.0 4 4

Sphaerobolus_stellatus_v1.0 25 23

Piloderma_croceum_F_1598_v1.0 9 9

Serpula_lacrymans_var._lacrymans_S7.9_ 11 11

Coniophora_puteana 21 20

Hydnomerulius_pinastri_v2.0 10 10

Paxillus_rubicundulus_Ve08.2h10_v1.0 6 6

Pisolithus_microcarpus_441_v1.0 4 4

Pisolithus_tinctorius_Marx_270_v1.0 4 4

Scleroderma_citrinum_Foug_A_v1.0 6 6

Coprinopsis_cinerea_okayama7_130_v3 8 8

Pleurotus_ostreatus_ (Oyster mushroom) 12 12

Amanita_thiersii_Skay4041_v1.0 13 13

Amanita_muscaria_Koide_v1.0 (Fly agaric) 8 8

Galerina_marginata_v1.0 22 22

Hebeloma_cylindrosporum_h7_v2.0 12 12

Laccaria_bicolor_S238N-H82_ 12 12

Agaricus_bisporus_var._bisporus_ 7 7

Schizophyllum_commune_ 9 9

Stereum_hirsutum_FP-91666_SS1__v1.0 22 21

Heterobasidion_annosum_ 18 18

Gloeophyllum_trabeumv1.0 12 12

Punctularia_strigosozonata_v1.0 13 13

Sebacina_vermifera_MAFF_305830_v1.0 12 12

Fomitiporia_mediterranea_v1.0 9 9

Tulasnella_calospora_AL13/4D_v1.0 7 7

Postia_placenta_ 36 36

Wolfiporia_cocos_MD-104_SS10__v1.0 20 20

Fomitopsis_pinicolav1.0 31 31

Fomitopsis_pinicola_FP-58527_SS1_v3.0 30 30

Phanerochaete_chrysosporium_RP-78_2.1 10 10

Dichomitus_squalens 29 29

Trametes_versicolor_v1.0 31 31

Tremella_mesenterica_ (Witches' butter) 2 2

Daldinia_eschscholzii_EC12_v1.0 17 17

Apiospora_montagnei_NRRL_25634_v1.0 19 19

Magnaporthe_poae_ATCC_64411_22 7 7

Magnaporthe_grisea_70-15_ 14 14

Podospora_anserina_ 11 11

Sporotrichum_thermophile_ATCC_42464_ 8 8

Thielavia_terrestris_NRRL_8126_ 10 10

Chaetomium_globosum_CBS_148.51_ 15 15

Neurospora_tetrasperma_ 9 9

Neurospora_discreta_FGSC_8579_ 8 8

Neurospora_crassa_OR74A_ 11 11

Cryphonectria_parasitica_ (Chestnut blight fungus) 16 16

Verticillium_albo-atrum_VaMs.102_ 10 10

Verticillium_dahliae_VdLs.17_ 11 11

Acremonium_alcalophilumv_1.0 8 8

Glomerella_graminicola_22 17 17

Fusarium_graminearum_ 19 19

Nectria_haematococca_mpVI_ 15 15

Fusarium_oxysporum_f._sp._lycopersici_4286_ 20 20

Fusarium_verticillioides_7600_ 18 18

Trichoderma_asperellum_CBS_433.97_v1.0 19 19

Trichoderma_atroviride_ 22 22

Trichoderma_citrinoviride_v1.0 14 14

Trichoderma_reesei_1.2 12 12

Trichoderma_virens_Gv29-8_ 16 16

Trichoderma_longibrachiatum_ATCC_18648_v1.0 10 10

Trichoderma_harzianum_CBS_226.95_v1.0 20 20

Amorphotheca_resinae_v1.0 (Creosote fungus) 14 14

Botrytis_cinerea_B05.10_ 14 14

Sclerotinia_sclerotiorum_ 12 12

Blumeria_graminis_22 3 3

Didymella_exigua_CBS_183.55_v1.0 11 11

Leptosphaeria_maculans_22 12 12

Setosphaeria_turcica_v1.0 15 15

Cochliobolus_miyabeanus_ATCC_44560_v1.0 12 12

Cochliobolus_victoriae_FI3_v1.0 14 14

Cochliobolus_carbonum_26-R-13_v1.0 13 13

Cochliobolus_heterostrophus_ (Southern corn leaf blight pathogen) 8 8

Alternaria_brassicicola_ 15 15

Cochliobolus_lunatus_m118_v2.0 12 12

Pyrenophora_teres_f._teres_22 14 14

Pyrenophora_tritici-repentis_ 13 13

Stagonospora_nodorum_ 16 16

Mycosphaerella_graminicola_IPO323_ 14 14

Zasmidium_cellare_ATCC_36951_v1.0 31 31

Dothistroma_septosporum 12 12

Septoria_musiva_v1.0 12 12

Mycosphaerella_fijiensis_CIRAD86_ 10 10

Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 8 8

Paracoccidioides_brasiliensis_Pb18_ 7 7

Coccidioides_posadasii_RMSCC_3488_ 17 17

Coccidioides_immitis_RS_ 17 17

Ajellomyces_dermatitidis_SLH14081_ 7 7

Histoplasma_capsulatum_class_NAmI_strain_WU24_ 5 5

Microsporum_canis_CBS_113480_ 15 15

Trichophyton_equinum_CBS_127.97_ 15 15

Trichophyton_verrucosum_HKI_0517_ 17 17

Arthroderma_benhamiae_CBS_112371_ 16 16

Trichophyton_tonsurans_CBS_112818_ 18 18

Trichophyton_rubrum_CBS_118892_ 17 17

Uncinocarpus_reesii_1704_ 17 17

Aspergillus_zonatus_v1.0 9 9

Penicillium_chrysogenum_Wisconsin_54-1255_ 8 8

Penicillium_chrysogenum_v1.0 9 9

Aspergillus_acidus_v1.0 12 12

Aspergillus_fumigatus_Af293 11 11

Aspergillus_brasiliensis_v1.0 10 10

Aspergillus_nidulans_FGSC_A4_ 8 8

Aspergillus_sydowii_v1.0 7 7

Aspergillus_versicolor_v1.0 7 7

Aspergillus_glaucus 6 6

Aspergillus_carbonarius_ITEM_5010_ 8 8

Neosartorya_fischeri_NRRL_181_ 8 8

Aspergillus_terreus_NIH2624_ 6 6

Aspergillus_tubingensis_v1.0 11 11

Aspergillus_wentii_v1.0 8 8

Aspergillus_oryzae_RIB40_ 8 8

Aspergillus_niger_22 11 11

Aspergillus_niger_ATCC_1015_ 5 5

Aspergillus_flavus_NRRL3357_ 9 9

Aspergillus_clavatus_NRRL_1_ 7 7

Penicillium_marneffei_ATCC_18224_ 11 11

Tuber_melanosporum_Mel28_22 3 3

Tuber_melanosporum_Vittad_ (Perigord truffle) 3 3

Hansenula_polymorpha_v2.0 2 2

Dekkera_bruxellensis_CBS_2499_v2.0 2 2

Pichia_membranifaciensv1.0 3 3

Candida_tanzawaensis_NRRL_Y-17324__v1.0 4 4

Candida_dubliniensis_CD36_ 3 3

Candida_tropicalis_MYA-3404_ 5 5

Candida_parapsilosis_ 3 3

Candida_albicans_SC5314 4 4

Lodderomyces_elongisporus_NRRL_YB-4239_ 3 3

Babjeviella_inositovora_NRRL_Y-12698_v1.0 3 3

Pichia_stipitis_CBS_6054_ 4 4

Candida_guilliermondii_ATCC_6260_ 3 3

Hyphopichia_burtonii_NRRL_Y-1933_v1.0 5 5

Debaromyces_hansenii 2 2

Wickerhamomyces_anomalus 3 3

Pichia_pastoris_GS115_ 2 2

Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 1 1

Yarrowia_lipolytica_CLIB122 9 9

Candida_lusitaniae_ATCC_42720_ 3 3

Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 3 3

Vanderwaltozyma_polyspora_DSM_70294_ 2 2

Candida_glabrata_CBS138 5 5

Kluyveromyces_thermotolerans_CBS_6340 3 3

Lachancea_kluyveri_ 4 4

Kluyveromyces_waltii 3 3

Ashbya_gossypii_ATCC_10895_ 3 3

Zygosaccharomyces_rouxii_ 3 3

Saccharomyces_mikatae_MIT 5 5

Saccharomyces_paradoxus_MIT 6 6

Saccharomyces_cerevisiae_76 (Baker's yeast) 5 5

Saccharomyces_bayanus_MIT 5 5

Kluyveromyces_lactis 3 3

Schizosaccharomyces_cryophilus_OY26_22 4 4

Schizosaccharomyces_octosporus_yFS286_ 3 3

Schizosaccharomyces_japonicus_yFS275_ 3 3

Schizosaccharomyces_pombe (Fission yeast) 2 2

Catenaria_anguillulae_PL171_v1.0 26 26

Allomyces_macrogynus_ATCC_38327_ 18 18

Spizellomyces_punctatus_DAOM_BR117_ 10 10

Dictyostelium_discoideum 8 8

Dictyostelium_purpureum_ 8 8

Selaginella_moellendorffii_ 6 6

Pinus_taeda (Loblolly pine) 8 8

Picea_abies (Norway spruce) 4 4

Eucalyptus_grandis_v201 (Rose gum) 11 11

Theobroma_cacao_B97-61/B2_v1 (Cacao) 4 4

Gossypium_raimondii_v221 16 16

Citrus_clementina_v165 11 11

Citrus_sinensis_v154 (Sweet orange) 9 9

Thellungiella_halophila_v173 7 7

Brassica_rapa_Chiifu-401_1.2 (Field mustard) 8 8

Capsella_rubella_v183 8 8

Arabidopsis_lyrata_ (Lyrate rockcress) 7 7

Arabidopsis_thaliana_10 (Thale cress) 5 5

Carica_papaya_ (Papaya) 4 4

Medicago_truncatula_ (Barrel medic) 13 13

Phaseolus_vulgaris_v186 (French bean) 8 8

Glycine_max_v109 (Soybean) 17 17

Cucumis_sativus_v122 (Cucumber) 9 9

Fragaria_vesca_ (Wild strawberry) 6 6

Malus_domestica_v196 (Apple) 10 10

Prunus_persica_v139 (Peach) 6 6

Linum_usitatissimum_v200 (Flax) 9 9

Manihot_esculenta_v147 (Cassava) 11 11

Populus_trichocarpa_v156 (Black cottonwood) 11 11

Vitis_vinifera_ (Wine grape) 3 3

Mimulus_guttatus_v140 (Spotted monkey flower) 7 7

Solanum_lycopersicum_v.2.3 (Tomato) 7 7

Solanum_tuberosum_ (Potato) 7 7

Actinidia_chinensis_Hongyang_ 4 4

Aquilegia_coerulea_v195 9 9

Triticum_urartu_22 5 5

Triticum_aestivum_22 (Bread wheat) 7 7

Aegilops_tauschii_22 4 4

Brachypodium_distachyon_ (Stiff brome) 7 7

Oryza_barthii_22 (African wild rice) 3 3

Oryza_meridionalis_22 5 5

Oryza_glumaepatula_22 4 4

Oryza_glaberrima (African rice) 5 5

Oryza_punctata_22 5 5

Oryza_nivara_22 7 7

Oryza_brachyantha_22 (Malo sina) 6 6

Oryza_sativa_ssp._japonica_5.0 (Japanese rice) 5 5

Oryza_sativa_v193 (Rice) 5 5

Phyllostachys_heterocyclavar._pubescens (Kikko-chiku) 2 2

Panicum_virgatum_v202 (Switchgrass) 7 7

Setaria_italica_v164 (Foxtail millet) 3 3

Zea_mays_subsp._mays_ (Maize) 5 5

Zea_mays_v181 (Maize) 5 5

Sorghum_bicolor_ (Sorghum) 4 4

Musa_balbisiana (Balbis banana) 4 4

Musa_acuminata_22 (Wild Malaysian banana) 5 5

Amborella_trichopoda_22 3 3

Physcomitrella_patens 2 2

Micromonas_sp._RCC299_ 1 1

Thecamonas_trahens_ATCC_50062_ 7 7

Bigelowiella_natans_CCMP2755_22 5 5

Cyanophora_paradoxa_ 10 10

Aureococcus_anophagefferens_ 4 4

Albugo_laibachii_22 2 2

Pythium_iwayamai_DAOM_BR242034_22 3 3

Pythium_arrhenomanes_ATCC_12531_22 2 2

Pythium_ultimum_v1.7-2 2 2

Pythium_aphanidermatum_DAOM_BR444_22 2 2

Pythium_irregulare_DAOM_BR486_22 2 2

Pythium_vexans_DAOM_BR484_22 2 2

Phytophthora_ramorum_1.1 (Sudden oak death agent) 2 2

Phytophthora_sojae_1.1 2 2

Phytophthora_infestans_T30-4_ 2 2

Phytophthora_capsici_ 2 2

Hyaloperonospora_arabidopsidis_22 2 2

Phaeodactylum_tricornutumCCAP_1055/1 11 11

Fragilariopsis_cylindrus 1 1

Symbiodinium_minutum_clade_B1_v1.2 1 1

Naegleria_gruberi_ 4 4

Emiliania_huxleyi_CCMP1516_ 2 2

Gloeobacter_violaceus_PCC_7421 1 1

Acidimicrobium_ferrooxidans_DSM_10331 3 3

Acidothermus_cellulolyticus_11B 2 2

Catenulispora_acidiphila_DSM_44928 11 11

Stackebrandtia_nassauensis_DSM_44728 7 7

Frankia_sp._EAN1pec 1 1

Frankia_alni_ACN14a 3 3

Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 1 1

Thermomonospora_curvata_DSM_43183 2 2

Streptosporangium_roseum_DSM_43021 1 1

Kitasatospora_setae_KM-6054 3 3

Streptomyces_coelicolor_A3(2) 1 1

Streptomyces_sp._PAMC26508 3 3

Streptomyces_flavogriseus_ATCC_33331 3 3

Streptomyces_sp._SirexAA-E 3 3

Streptomyces_griseus_subsp._griseus_NBRC_13350 5 5

Streptomyces_bingchenggensis_BCW-1 3 3

Streptomyces_violaceusniger_Tu_4113 3 3

Streptomyces_avermitilis_MA-4680 3 3

Streptomyces_cattleya_NRRL_8057_=_DSM_46488 2 2

Streptomyces_scabiei_87.22 1 1

Streptomyces_hygroscopicus_subsp._jinggangensis_5008 2 2

Actinosynnema_mirum_DSM_43827 8 8

Saccharomonospora_viridis_DSM_43017 2 2

Saccharopolyspora_erythraea_NRRL_2338 4 4

Amycolatopsis_mediterranei_U32 4 4

Kribbella_flavida_DSM_17836 2 2

Microlunatus_phosphovorus_NM-1 1 1

Salinispora_arenicola_CNS-205 3 3

Salinispora_tropica_CNB-440 1 1

Verrucosispora_maris_AB-18-032 8 8

Micromonospora_sp._L5 2 2

Micromonospora_aurantiaca_ATCC_27029 2 2

Actinoplanes_sp._N902-109 3 3

Actinoplanes_sp._SE50/110 4 4

Actinoplanes_missouriensis_431 4 4

Segniliparus_rotundus_DSM_44985 2 2

Amycolicicoccus_subflavus_DQS3-9A1 1 1

Mycobacterium_vanbaalenii_PYR-1 1 1

Mycobacterium_rhodesiae_NBB3 2 2

Mycobacterium_chubuense_NBB4 1 1

Mycobacterium_smegmatis_str._MC2_155 1 1

Kytococcus_sedentarius_DSM_20547 1 1

Leifsonia_xyli_subsp._xyli_str._CTCB07 2 2

Clavibacter_michiganensis_subsp._michiganensis_NCPPB_382 4 4

Intrasporangium_calvum_DSM_43043 2 2

Kocuria_rhizophila_DC2201 1 1

Arthrobacter_sp._FB24 1 1

Renibacterium_salmoninarum_ATCC_33209 1 1

Caldilinea_aerophila_DSM_14535_=_NBRC_104270 1 1

Truepera_radiovictrix_DSM_17093 1 1

Deinococcus_gobiensis_I-0 3 3

Deinococcus_deserti_VCD115 5 5

Deinococcus_maricopensis_DSM_21211 5 5

Deinococcus_geothermalis_DSM_11300 1 1

Deinococcus_proteolyticus_MRP 2 2

Deinococcus_radiodurans_R1 2 2

Oceanithermus_profundus_DSM_14977 1 1

Marinithermus_hydrothermalis_DSM_14884 1 1

Meiothermus_silvanus_DSM_9946 2 2

Meiothermus_ruber_DSM_1279 1 1

Thermus_sp._CCB_US3_UF1 1 1

Natranaerobius_thermophilus_JW/NM-WN-LF 1 1

Symbiobacterium_thermophilum_IAM_14863 1 1

Sulfobacillus_acidophilus_DSM_10332 3 3

Thermincola_potens_JR 2 2

Clostridium_kluyveri_DSM_555 1 1

Clostridium_beijerinckii_NCIMB_8052 1 1

Clostridium_acetobutylicum_ATCC_824 1 1

Thermoanaerobacterium_xylanolyticum_LX-11 1 1

Thermoanaerobacterium_thermosaccharolyticum_DSM_571 1 1

Coprothermobacter_proteolyticus_DSM_5265 1 1

Moorella_thermoacetica_ATCC_39073 1 1

Lactobacillus_buchneri_NRRL_B-30929 7 7

Lactobacillus_buchneri 8 8

Lactobacillus_brevis_ATCC_367 1 1

Exiguobacterium_sp._AT1b 1 1

Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_DSM_446 3 3

Geobacillus_sp._WCH70 1 1

Geobacillus_thermodenitrificans_NG80-2 1 1

Bacillus_sp._JS 2 2

Bacillus_sp._1NLA3E 1 1

Bacillus_amyloliquefaciens_FZB42 2 2

Bacillus_atrophaeus_1942 1 1

Bacillus_subtilis_subsp._subtilis_str._168 2 2

Bacillus_licheniformis_DSM_13_=_ATCC_14580 2 2

Bacillus_halodurans_C-125 2 2

Bacillus_thuringiensis_str._Al_Hakam 1 1

Bacillus_cereus_03BB102 1 1

Bacillus_pseudofirmus_OF4 2 2

Bacillus_clausii_KSM-K16 1 1

Bacillus_cellulosilyticus_DSM_2522 1 1

Bacillus_pumilus_SAFR-032 2 2

Haliscomenobacter_hydrossis_DSM_1100 1 1

Niastella_koreensis_GR20-10 1 1

Flexibacter_litoralis_DSM_6794 1 1

Belliella_baltica_DSM_15883 1 1

Marivirga_tractuosa_DSM_4126 1 1

Spirosoma_linguale_DSM_74 2 2

Runella_slithyformis_DSM_19594 1 1

Prevotella_intermedia_17 1 1

Croceibacter_atlanticus_HTCC2559 1 1

Waddlia_chondrophila_WSU_86-1044 1 1

Mesotoga_prima_MesG1.Ag.4.2 1 1

Candidatus_Solibacter_usitatus_Ellin6076 4 4

Granulicella_tundricola_MP5ACTX9 10 10

Granulicella_mallensis_MP5ACTX8 11 11

Candidatus_Koribacter_versatilis_Ellin345 6 6

Terriglobus_saanensis_SP1PR4 5 5

Terriglobus_roseus_DSM_18391 3 3

Acidobacterium_capsulatum_ATCC_51196 6 6

Bacteriovorax_marinus_SJ 1 1

Geobacter_sp._M21 1 1

Geobacter_bemidjiensis_Bem 1 1

Geobacter_sulfurreducens_KN400 1 1

Geobacter_metallireducens_GS-15 1 1

Haliangium_ochraceum_DSM_14365 9 9

Sorangium_cellulosum_'So_ce_56' 3 3

Stigmatella_aurantiaca_DW4/3-1 12 12

Corallococcus_coralloides_DSM_2259 5 5

Myxococcus_xanthus_DK_1622 3 3

Myxococcus_fulvus_HW-1 1 1

Chromobacterium_violaceum_ATCC_12472 3 3

Rubrivivax_gelatinosus_IL144 1 1

Burkholderia_phytofirmans_PsJN 1 1

Burkholderia_phymatum_STM815 2 2

Burkholderia_xenovorans_LB400 1 1

Ralstonia_eutropha_JMP134 1 1

Burkholderia_sp._RPE64 1 1

Burkholderia_sp._CCGE1002 1 1

Burkholderia_thailandensis_E264 5 5

Burkholderia_pseudomallei_1106a 4 4

Burkholderia_mallei_SAVP1 2 2

Burkholderia_ambifaria_AMMD 4 4

Burkholderia_cenocepacia_HI2424 3 3

Burkholderia_multivorans_ATCC_17616 2 2

Burkholderia_vietnamiensis_G4 2 2

Burkholderia_gladioli_BSR3 3 3

Burkholderia_glumae_BGR1 3 3

Polaromonas_sp._JS666 1 1

Collimonas_fungivorans_Ter331 2 2

Azorhizobium_caulinodans_ORS_571 1 1

Methylocella_silvestris_BL2 1 1

Teredinibacter_turnerae_T7901 3 3

Cellvibrio_japonicus_Ueda107 1 1

Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 1 1

Vibrio_harveyi_ATCC_BAA-1116 2 2

Vibrio_splendidus_LGP32 1 1

Vibrio_furnissii_NCTC_11218 1 1

Vibrio_vulnificus_MO6-24/O 1 1

Vibrio_cholerae_O395 1 1

Photobacterium_profundum_SS9 1 1

Ferrimonas_balearica_DSM_9799 1 1

Shewanella_piezotolerans_WP3 1 1

Shewanella_loihica_PV-4 1 1

Shewanella_sediminis_HAW-EB3 1 1

Shewanella_denitrificans_OS217 2 2

Shewanella_oneidensis_MR-1 1 1

Shewanella_baltica_OS185 2 2

Shewanella_woodyi_ATCC_51908 3 3

Shewanella_sp._MR-4 1 1

Shewanella_amazonensis_SB2B 3 3

Shewanella_violacea_DSS12 2 2

Shewanella_frigidimarina_NCIMB_400 1 1

Shewanella_putrefaciens_CN-32 1 1

Colwellia_psychrerythraea_34H 1 1

Glaciecola_sp._4H-3-7+YE-5 1 1

Alteromonas_sp._SN2 1 1

Alteromonas_macleodii_str._'Deep_ecotype' 1 1

Kangiella_koreensis_DSM_16069 3 3

Marinomonas_mediterranea_MMB-1 1 1

Methylococcus_capsulatus_str._Bath 1 1

Frateuria_aurantia_DSM_6220 1 1

Xanthomonas_axonopodis_pv._citri_str._306 3 3

Xanthomonas_albilineans_GPE_PC73 5 5

Xanthomonas_oryzae_pv._oryzae_PXO99A 2 2

Legionella_longbeachae_NSW150 1 1

Pectobacterium_wasabiae_WPP163 1 1

Pectobacterium_sp._SCC3193 1 1

Pectobacterium_atrosepticum_SCRI1043 1 1

Pectobacterium_carotovorum_subsp._carotovorum_PC1 1 1

Acinetobacter_oleivorans_DR1 1 1

Acinetobacter_calcoaceticus_PHEA-2 1 1

Acidilobus_saccharovorans_345-15 3 3

Metallosphaera_cuprina_Ar-4 3 3

Metallosphaera_sedula_DSM_5348 4 4

Acidianus_hospitalis_W1 2 2

Sulfolobus_tokodaii_str._7 4 4

Sulfolobus_islandicus_Y.N.15.51 4 4

Sulfolobus_solfataricus_P2 3 3

Sulfolobus_acidocaldarius_DSM_639 2 2

Vulcanisaeta_moutnovskia_768-28 1 1

Vulcanisaeta_distributa_DSM_14429 1 1

Caldivirga_maquilingensis_IC-167 1 1

Thermoproteus_uzoniensis_768-20 1 1

Thermoproteus_tenax_Kra_1 1 1

halophilic_archaeon_DL31 1 1

Methanocella_arvoryzae_MRE50 2 2

Methanocella_conradii_HZ254 3 3

Methanocella_paludicola_SANAE 4 4

Thermococcus_onnurineus_NA1 2 2

Thermococcus_kodakarensis_KOD1 1 1

Thermoplasma_volcanium_GSS1 3 3

Thermoplasma_acidophilum_DSM_1728 2 2

Picrophilus_torridus_DSM_9790 2 2

Aciduliprofundum_sp._MAR08-339 2 2

Aciduliprofundum_boonei_T469 2 2

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Longest transcript per gene
Genome Number Proteins

Homo_sapiens_69_37 (Human) 19 19

Pan_troglodytes_69_2.1.4 (Chimpanzee) 17 17

Gorilla_gorilla_69_3.1 (Western gorilla) 15 15

Pongo_abelii_69_2 (Sumatran orangutan) 15 15

Nomascus_leucogenys_69_1.0 (Northern white-cheeked gibbon) 14 14

Macaca_mulatta_69_1 (Rhesus monkey) 16 16

Callithrix_jacchus_69_3.2.1 (White-tufted-ear marmoset) 17 17

Otolemur_garnettii_69_3 (Small-eared galago) 13 13

Microcebus_murinus_69_1 (Gray mouse lemur) 14 14

Rattus_norvegicus_69_3.4 (Norway rat) 20 20

Mus_musculus_69_38 (House mouse) 17 17

Dipodomys_ordii_69_1 (Ord's kangaroo rat) 13 13

Ictidomys_tridecemlineatus_69_2 (Thirteen-lined ground squirrel) 16 16

Cavia_porcellus_69_3 (Domestic guinea pig) 15 15

Oryctolagus_cuniculus_69_2 (Rabbit) 13 13

Ochotona_princeps_69 (American pika) 13 13

Tupaia_belangeri_69 (Northern tree shrew) 9 9

Sus_scrofa_69_10.2 (Pig) 17 17

Bos_taurus_69_3.1 (Cattle) 13 13

Vicugna_pacos_69_1 (Alpaca) 11 11

Tursiops_truncatus_69_1 (Bottlenose dolphin) 15 15

Mustela_putorius_furo_69_1.0 (Domestic ferret) 14 14

Ailuropoda_melanoleuca_69_1 (Giant panda) 15 15

Canis_familiaris_69_3.1 (Dog) 14 14

Felis_catus_69 (Domestic cat) 9 9

Equus_caballus_69_2 (Horse) 14 13

Myotis_lucifugus_69_2.0 (Little brown bat) 12 12

Pteropus_vampyrus_69_1 (Large flying fox) 14 14

Sorex_araneus_69_1 (European shrew) 8 8

Erinaceus_europaeus_69 (Western European hedgehog) 11 11

Procavia_capensis_69_1 (Cape rock hyrax) 12 12

Loxodonta_africana_69_3 (African savanna elephant) 13 13

Echinops_telfairi_69 (Small Madagascar hedgehog) 12 12

Dasypus_novemcinctus_69_2 (Nine-banded armadillo) 11 11

Choloepus_hoffmanni_69_1 (Hoffmann's two-fingered sloth) 10 10

Macropus_eugenii_69_1.0 (Tammar wallaby) 13 13

Sarcophilus_harrisii_69_7.0 (Tasmanian devil) 17 17

Monodelphis_domestica_69_5 (Gray short-tailed opossum) 15 15

Ornithorhynchus_anatinus_69_5 (Platypus) 10 10

Petromyzon_marinus_69_7.0 (Sea lamprey) 3 3

Meleagris_gallopavo_69_2 (Turkey) 11 11

Gallus_gallus_69_2 (Chicken) 12 12

Taeniopygia_guttata_69_3.2.4 (Zebra finch) 12 12

Pelodiscus_sinensis_69_1.0 (Chinese soft-shelled turtle) 13 13

Anolis_carolinensis_69_2.0 (Green anole) 12 12

Xenopus_tropicalis_69_4.2 (Tropical clawed frog) 16 16

Latimeria_chalumnae_69_1 (Coelacanth) 10 9

Gadus_morhua_69_1 (Atlantic cod) 11 11

Tetraodon_nigroviridis_69_8 (Spotted green pufferfish) 13 13

Takifugu_rubripes_69_4 (Torafugu) 11 11

Gasterosteus_aculeatus_69_1 (Three-spined stickleback) 14 14

Oryzias_latipes_69_1 (Japanese medaka) 15 15

Xiphophorus_maculatus_69_4.4.2 (Southern platyfish) 16 16

Oreochromis_niloticus_69_1.0 (Nile tilapia) 13 13

Danio_rerio_69_9 (Zebrafish) 16 16

Ciona_savignyi_69_2.0 (Pacific transparent sea squirt) 11 10

Ciona_intestinalis_69 (Vase tunicate) 11 11

Drosophila_melanogaster_69_5 (Fruit fly) 20 20

Caenorhabditis_elegans_69_215 (Roundworm) 11 11

Saccharomyces_cerevisiae_69_4 (Baker's yeast) 5 5

Arabidopsis_thaliana_10 (Thale cress) 5 5

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Others
Genome Number Proteins

Homo_sapiens_75_37_(old_version_GRC) (Human) 62 62

Homo_sapiens__(NCBI_version) (Human) 31 31

Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate) (House mouse) 17 17

Heliconius_numata__(Incomplete) 3 3

Loa_loa_v3.3_(Request) (Eye worm) 6 6

Wuchereria_bancrofti_v1.0_(Request) (Agent of lymphatic filariasis) 5 5

Brugia_malayi_v1.0_(Duplicate) (Agent of lymphatic filariasis) 5 5

Moniliophthora_perniciosa_FA553__(Genome_survey) 5 5

Encephalitozoon_intestinalis__(endoparasite) 1 1

Encephalitozoon_cuniculi_(endoparasite) 1 1

Picea_sitchensis__(Incomplete) (Sitka spruce) 1 1

Lotus_japonicus__(Early_assembly) 3 3

Malus_x_domestica_(Duplicate) (Apple) 10 10

Ricinus_communis__(Early_assembly) (Castor bean) 5 5

Nicotiana_benthamiana_0.4.4_(Early_draft) 7 7

Solanum_pimpinellifolium_A-1.0_(Early_draft) (Currant tomato) 7 7

Solanum_lycopersicum_v2.3_(Early_assembly) (Tomato) 7 7

Phoenix_dactylifera__(Early_draft) (Date palm) 1 1

Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 2 2

NCBI_plasmid_sequences_(Plasmids) 12 12

Protein_Data_Bank_(all_PDB_sequenc) 110 110

TargetDB__(Targets) 162 162

SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 212 212

STRING_v9.0.5_(STRING) 1464 1456

Uniprot_2018_03_genome 22481 22308

NCBI_2017_08_genome 30782 30742

NCBI_viral_sequences_(Viral) 1 1

PDB_chains_(SCOP_1.75)_(PDB) 16 16

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Domain combinations for Protease propeptides/inhibitors superfamily in groups of genomes