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Home > SCOP hierarchy > ACT-like > Domain combinations

Domain combinations for ACT-like superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a ACT-like domain in that genome.

Complete genomes
Genome Number Proteins

Homo_sapiens_76_38 (Human) 26 22

Pan_troglodytes_76_2.1.4 (Chimpanzee) 9 7

Gorilla_gorilla_76_3.1 (Western gorilla) 16 12

Pongo_abelii_76_2 (Sumatran orangutan) 8 6

Nomascus_leucogenys_76_1.0 (Northern white-cheeked gibbon) 8 7

Papio_anubis_76 (Olive baboon) 7 5

Macaca_mulatta_76_1 (Rhesus monkey) 14 10

Callithrix_jacchus_76_3.2.1 (White-tufted-ear marmoset) 12 11

Otolemur_garnettii_76_3 (Small-eared galago) 8 6

Microcebus_murinus_76_1 (Gray mouse lemur) 7 5

Rattus_norvegicus_76_5.0 (Norway rat) 8 6

Mus_musculus_76_38 (House mouse) 15 13

Dipodomys_ordii_76_1 (Ord's kangaroo rat) 6 6

Ictidomys_tridecemlineatus_76_2 (Thirteen-lined ground squirrel) 8 6

Heterocephalus_glaber_v1.7-2 (Naked mole-rat) 6 5

Cavia_porcellus_76_3 (Domestic guinea pig) 8 6

Oryctolagus_cuniculus_76_2 (Rabbit) 7 5

Ochotona_princeps_76 (American pika) 7 5

Tupaia_belangeri_76 (Northern tree shrew) 2 2

Sus_scrofa_76_10.2 (Pig) 6 4

Bos_taurus_76_3.1 (Cattle) 8 6

Ovis_aries_76_3.1 (Sheep) 7 6

Vicugna_pacos_76_1 (Alpaca) 3 3

Tursiops_truncatus_76_1 (Bottlenose dolphin) 8 6

Mustela_putorius_furo_76_1.0 (Domestic ferret) 8 6

Ailuropoda_melanoleuca_76_1 (Giant panda) 10 7

Canis_familiaris_76_3.1 (Dog) 9 7

Felis_catus_76_6.2 (Domestic cat) 8 6

Equus_caballus_76_2 (Horse) 7 5

Myotis_lucifugus_76_2.0 (Little brown bat) 7 5

Pteropus_vampyrus_76_1 (Large flying fox) 7 5

Sorex_araneus_76_1 (European shrew) 5 4

Erinaceus_europaeus_76 (Western European hedgehog) 4 4

Procavia_capensis_76_1 (Cape rock hyrax) 4 3

Loxodonta_africana_76_3 (African savanna elephant) 8 6

Echinops_telfairi_76 (Small Madagascar hedgehog) 2 2

Dasypus_novemcinctus_76_2 (Nine-banded armadillo) 8 6

Choloepus_hoffmanni_76_1 (Hoffmann's two-fingered sloth) 2 2

Macropus_eugenii_76_1.0 (Tammar wallaby) 6 4

Sarcophilus_harrisii_76_7.0 (Tasmanian devil) 10 7

Monodelphis_domestica_76_5 (Gray short-tailed opossum) 8 6

Ornithorhynchus_anatinus_76_5 (Platypus) 4 4

Saccoglossus_kowalevskii_v3.0 8 6

Petromyzon_marinus_76_7.0 (Sea lamprey) 4 3

Meleagris_gallopavo_76_2 (Turkey) 11 11

Gallus_gallus_76_4 (Chicken) 9 7

Anas_platyrhynchos_76_1.0 (Mallard) 9 7

Taeniopygia_guttata_76_3.2.4 (Zebra finch) 10 9

Ficedula_albicollis_76_1.0 (Collared flycatcher) 8 7

Pelodiscus_sinensis_76_1.0 (Chinese soft-shelled turtle) 7 6

Anolis_carolinensis_76_2.0 (Green anole) 5 4

Xenopus_laevis_ (African clawed frog) 15 10

Xenopus_tropicalis_76_4.2 (Tropical clawed frog) 14 10

Latimeria_chalumnae_76_1 (Coelacanth) 5 5

Lepisosteus_oculatus_76 (Spotted gar) 7 5

Gadus_morhua_76_1 (Atlantic cod) 9 8

Tetraodon_nigroviridis_76_8 (Spotted green pufferfish) 10 8

Takifugu_rubripes_76_4 (Torafugu) 16 14

Gasterosteus_aculeatus_76_1 (Three-spined stickleback) 16 14

Oryzias_latipes_76_1 (Japanese medaka) 14 10

Xiphophorus_maculatus_76_4.4.2 (Southern platyfish) 10 8

Poecilia_formosa_76 (Amazon molly) 10 8

Oreochromis_niloticus_76_1.0 (Nile tilapia) 11 9

Astyanax_mexicanus_76 (Mexican tetra) 10 8

Danio_rerio_76_9 (Zebrafish) 11 10

Oikopleura_dioica 1 1

Ciona_savignyi_76_2.0 (Pacific transparent sea squirt) 1 1

Strongylocentrotus_purpuratus_v3.1 (Purple sea urchin) 6 5

Adineta_vaga 10 8

Octopus_bimaculoides_280 3 3

Crassostrea_gigas_22 (Pacific oyster) 3 3

Lottia_gigantea_ (Owl limpet) 3 3

Helobdella_robusta_ 1 1

Capitella_sp._I_ 3 3

Danaus_plexippus_OGS1.0 (Monarch butterfly) 3 3

Heliconius_melpomene_ (Postman butterfly) 3 3

Bombyx_mori_ (Domestic silkworm) 3 3

Nasonia_vitripennis_ (Jewel wasp) 2 2

Apis_mellifera_38.2d_(Not_maintained) (Honey bee) 15 15

Harpegnathos_saltator_v3.3 (Jerdon's jumping ant) 3 3

Linepithema_humile_v1.1 (Argentine ant) 2 2

Pogonomyrmex_barbatus_v1.2 (Red harvester ant) 3 3

Solenopsis_invicta_v.2.2.3 (Red fire ant) 3 3

Acromyrmex_echinatior_v3.8 (Panamanian leafcutter ant) 3 3

Atta_cephalotes_v1.1 3 3

Camponotus_floridanus_v3.3 (Florida carpenter ant) 3 3

Lucilia_cuprina (Australian sheep blowfly) 4 4

Drosophila_grimshawi_1.3 3 3

Drosophila_willistoni_1.3 3 3

Drosophila_pseudoobscura_2.13 3 3

Drosophila_persimilis_1.3 4 4

Drosophila_suzukii 3 3

Drosophila_yakuba_1.3 3 3

Drosophila_simulans_1.3 3 3

Drosophila_sechellia_1.3 3 3

Drosophila_melanogaster_76_5 (Fruit fly) 5 5

Drosophila_erecta_1.3 3 3

Drosophila_ananassae_1.3 3 3

Drosophila_virilis_1.2 3 3

Drosophila_mojavensis_1.3 3 3

Megaselia_scalaris_22 1 1

Culex_pipiens_quinquefasciatus_ (Southern house mosquito) 4 4

Anopheles_darlingi_22 (American malaria mosquito) 2 2

Anopheles_gambiae_49_3j (African malaria mosquito) 6 6

Tribolium_castaneum_3.0 (Red flour beetle) 3 3

Pediculus_humanus_corporis__(Early_assembly) (Human body louse) 4 4

Acyrthosiphon_pisum_ (Pea aphid) 3 3

Rhodnius_prolixus_22 3 3

Daphnia_pulex_ (Common water flea) 2 2

Strigamia_maritima_22 3 3

Sarcoptes_scabiei 2 2

Tetranychus_urticae_ (Two-spotted spider mite) 3 3

Ixodes_scapularis__(Preliminary) (Black-legged tick) 2 2

Pristionchus_pacificus_ 1 1

Meloidogyne_incognita_ (Southern root-knot nematode) 1 1

Meloidogyne_hapla_ 1 1

Caenorhabditis_japonica_ 7 5

Caenorhabditis_brenneri_ 3 3

Caenorhabditis_remanei_ 2 2

Caenorhabditis_elegans_76_235 (Roundworm) 3 3

Caenorhabditis_briggsae_2 2 2

Trichinella_spiralis_22 1 1

Mnemiopsis_leidyi (Sea walnut) 1 1

Acropora_digitifera_v1.0 2 2

Nematostella_vectensis_1.0 (Starlet sea anemone) 8 7

Hydra_vulgaris 2 1

Amphimedon_queenslandica 17 11

Trichoplax_adhaerens_ 4 3

Proterospongia_sp._ATCC_50818_ 4 3

Monosiga_brevicollis_ 6 5

Sphaeroforma_arctica_JP610_ 13 10

Capsaspora_owczarzaki_ATCC_30864_ 11 8

Conidiobolus_coronatus_NRRL28638_v1.0 9 7

Mortierella_verticillata_NRRL_6337_ 22 15

Phycomyces_blakesleeanus_ 16 11

Rhizopus_oryzae_RA_99-880_ 22 14

Mucor_circinelloides_ 18 11

Rhizomucor_miehei_CAU432_ 15 10

Malassezia_globosa_CBS_7966_ 12 8

Sporisorium_reilianum_22 8 6

Ustilago_maydis_ 7 5

Mixia_osmundae_IAM_14324_v1.0 9 6

Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 6 4

Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 4 3

Melampsora_laricis-populina_ 6 4

Rhodotorula_graminis_WP1_v1.0 7 5

Sporobolomyces_roseus_IAM_13481_ 4 4

Microbotryum_violaceum_22 8 6

Wallemia_sebi_v1.0 7 5

Sphaerobolus_stellatus_v1.0 10 7

Piloderma_croceum_F_1598_v1.0 9 6

Serpula_lacrymans_var._lacrymans_S7.9_ 9 6

Coniophora_puteana 8 6

Hydnomerulius_pinastri_v2.0 10 6

Paxillus_rubicundulus_Ve08.2h10_v1.0 8 6

Pisolithus_microcarpus_441_v1.0 7 5

Pisolithus_tinctorius_Marx_270_v1.0 9 6

Scleroderma_citrinum_Foug_A_v1.0 9 6

Coprinopsis_cinerea_okayama7_130_v3 11 7

Pleurotus_ostreatus_ (Oyster mushroom) 12 8

Amanita_thiersii_Skay4041_v1.0 9 6

Amanita_muscaria_Koide_v1.0 (Fly agaric) 9 6

Galerina_marginata_v1.0 9 6

Hebeloma_cylindrosporum_h7_v2.0 9 6

Laccaria_bicolor_S238N-H82_ 10 6

Agaricus_bisporus_var._bisporus_ 6 4

Schizophyllum_commune_ 8 6

Stereum_hirsutum_FP-91666_SS1__v1.0 8 6

Heterobasidion_annosum_ 6 4

Gloeophyllum_trabeumv1.0 7 5

Punctularia_strigosozonata_v1.0 6 4

Sebacina_vermifera_MAFF_305830_v1.0 9 5

Fomitiporia_mediterranea_v1.0 9 6

Tulasnella_calospora_AL13/4D_v1.0 7 6

Postia_placenta_ 14 9

Wolfiporia_cocos_MD-104_SS10__v1.0 6 4

Fomitopsis_pinicolav1.0 7 5

Fomitopsis_pinicola_FP-58527_SS1_v3.0 7 5

Phanerochaete_chrysosporium_RP-78_2.1 7 5

Dichomitus_squalens 8 6

Trametes_versicolor_v1.0 7 5

Tremella_mesenterica_ (Witches' butter) 7 5

Daldinia_eschscholzii_EC12_v1.0 11 8

Apiospora_montagnei_NRRL_25634_v1.0 10 8

Magnaporthe_poae_ATCC_64411_22 6 5

Magnaporthe_grisea_70-15_ 10 8

Podospora_anserina_ 9 7

Sporotrichum_thermophile_ATCC_42464_ 10 8

Thielavia_terrestris_NRRL_8126_ 10 8

Chaetomium_globosum_CBS_148.51_ 9 7

Neurospora_tetrasperma_ 9 7

Neurospora_discreta_FGSC_8579_ 7 6

Neurospora_crassa_OR74A_ 10 8

Cryphonectria_parasitica_ (Chestnut blight fungus) 10 8

Verticillium_albo-atrum_VaMs.102_ 13 9

Verticillium_dahliae_VdLs.17_ 12 9

Acremonium_alcalophilumv_1.0 11 8

Glomerella_graminicola_22 12 9

Fusarium_graminearum_ 12 9

Nectria_haematococca_mpVI_ 14 10

Fusarium_oxysporum_f._sp._lycopersici_4286_ 13 9

Fusarium_verticillioides_7600_ 13 9

Trichoderma_asperellum_CBS_433.97_v1.0 12 9

Trichoderma_atroviride_ 12 9

Trichoderma_citrinoviride_v1.0 12 8

Trichoderma_reesei_1.2 12 9

Trichoderma_virens_Gv29-8_ 12 9

Trichoderma_longibrachiatum_ATCC_18648_v1.0 12 9

Trichoderma_harzianum_CBS_226.95_v1.0 12 9

Amorphotheca_resinae_v1.0 (Creosote fungus) 11 8

Botrytis_cinerea_B05.10_ 8 6

Sclerotinia_sclerotiorum_ 9 7

Blumeria_graminis_22 6 4

Didymella_exigua_CBS_183.55_v1.0 10 8

Leptosphaeria_maculans_22 10 8

Setosphaeria_turcica_v1.0 10 8

Cochliobolus_miyabeanus_ATCC_44560_v1.0 10 8

Cochliobolus_victoriae_FI3_v1.0 10 8

Cochliobolus_carbonum_26-R-13_v1.0 10 8

Cochliobolus_heterostrophus_ (Southern corn leaf blight pathogen) 8 6

Alternaria_brassicicola_ 8 7

Cochliobolus_lunatus_m118_v2.0 9 7

Pyrenophora_teres_f._teres_22 13 9

Pyrenophora_tritici-repentis_ 11 8

Stagonospora_nodorum_ 10 8

Mycosphaerella_graminicola_IPO323_ 11 9

Zasmidium_cellare_ATCC_36951_v1.0 14 10

Dothistroma_septosporum 10 8

Septoria_musiva_v1.0 10 8

Mycosphaerella_fijiensis_CIRAD86_ 10 8

Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 9 7

Paracoccidioides_brasiliensis_Pb18_ 12 8

Coccidioides_posadasii_RMSCC_3488_ 8 6

Coccidioides_immitis_RS_ 8 6

Ajellomyces_dermatitidis_SLH14081_ 11 8

Histoplasma_capsulatum_class_NAmI_strain_WU24_ 9 7

Microsporum_canis_CBS_113480_ 9 7

Trichophyton_equinum_CBS_127.97_ 9 7

Trichophyton_verrucosum_HKI_0517_ 9 7

Arthroderma_benhamiae_CBS_112371_ 9 7

Trichophyton_tonsurans_CBS_112818_ 9 7

Trichophyton_rubrum_CBS_118892_ 9 7

Uncinocarpus_reesii_1704_ 7 6

Aspergillus_zonatus_v1.0 25 19

Penicillium_chrysogenum_Wisconsin_54-1255_ 10 8

Penicillium_chrysogenum_v1.0 10 8

Aspergillus_acidus_v1.0 11 8

Aspergillus_fumigatus_Af293 10 8

Aspergillus_brasiliensis_v1.0 8 6

Aspergillus_nidulans_FGSC_A4_ 9 7

Aspergillus_sydowii_v1.0 9 7

Aspergillus_versicolor_v1.0 9 7

Aspergillus_glaucus 9 7

Aspergillus_carbonarius_ITEM_5010_ 9 7

Neosartorya_fischeri_NRRL_181_ 10 8

Aspergillus_terreus_NIH2624_ 8 6

Aspergillus_tubingensis_v1.0 11 8

Aspergillus_wentii_v1.0 12 9

Aspergillus_oryzae_RIB40_ 11 8

Aspergillus_niger_22 11 8

Aspergillus_niger_ATCC_1015_ 6 4

Aspergillus_flavus_NRRL3357_ 11 8

Aspergillus_clavatus_NRRL_1_ 10 8

Penicillium_marneffei_ATCC_18224_ 10 7

Tuber_melanosporum_Mel28_22 7 6

Tuber_melanosporum_Vittad_ (Perigord truffle) 15 10

Hansenula_polymorpha_v2.0 7 5

Dekkera_bruxellensis_CBS_2499_v2.0 8 6

Pichia_membranifaciensv1.0 9 7

Candida_tanzawaensis_NRRL_Y-17324__v1.0 8 6

Candida_dubliniensis_CD36_ 8 6

Candida_tropicalis_MYA-3404_ 8 6

Candida_parapsilosis_ 8 6

Candida_albicans_SC5314 8 6

Lodderomyces_elongisporus_NRRL_YB-4239_ 8 6

Babjeviella_inositovora_NRRL_Y-12698_v1.0 8 6

Pichia_stipitis_CBS_6054_ 8 6

Candida_guilliermondii_ATCC_6260_ 7 5

Hyphopichia_burtonii_NRRL_Y-1933_v1.0 9 6

Debaromyces_hansenii 11 7

Wickerhamomyces_anomalus 7 5

Pichia_pastoris_GS115_ 7 5

Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 7 5

Yarrowia_lipolytica_CLIB122 11 7

Candida_lusitaniae_ATCC_42720_ 8 6

Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 8 6

Vanderwaltozyma_polyspora_DSM_70294_ 8 6

Candida_glabrata_CBS138 7 5

Kluyveromyces_thermotolerans_CBS_6340 7 5

Lachancea_kluyveri_ 7 5

Kluyveromyces_waltii 7 5

Ashbya_gossypii_ATCC_10895_ 7 5

Zygosaccharomyces_rouxii_ 7 5

Saccharomyces_mikatae_MIT 8 6

Saccharomyces_paradoxus_MIT 8 6

Saccharomyces_cerevisiae_76 (Baker's yeast) 8 6

Saccharomyces_bayanus_MIT 8 6

Kluyveromyces_lactis 7 5

Schizosaccharomyces_cryophilus_OY26_22 7 5

Schizosaccharomyces_octosporus_yFS286_ 7 5

Schizosaccharomyces_japonicus_yFS275_ 5 4

Schizosaccharomyces_pombe (Fission yeast) 7 5

Catenaria_anguillulae_PL171_v1.0 14 9

Allomyces_macrogynus_ATCC_38327_ 29 21

Spizellomyces_punctatus_DAOM_BR117_ 14 10

Dictyostelium_discoideum 2 2

Dictyostelium_purpureum_ 2 2

Entamoeba_invadens_1.2 1 1

Selaginella_moellendorffii_ 76 48

Pinus_taeda (Loblolly pine) 84 58

Picea_abies (Norway spruce) 45 28

Eucalyptus_grandis_v201 (Rose gum) 127 73

Theobroma_cacao_B97-61/B2_v1 (Cacao) 64 35

Gossypium_raimondii_v221 267 158

Citrus_clementina_v165 105 59

Citrus_sinensis_v154 (Sweet orange) 142 86

Thellungiella_halophila_v173 94 53

Brassica_rapa_Chiifu-401_1.2 (Field mustard) 118 62

Capsella_rubella_v183 79 42

Arabidopsis_lyrata_ (Lyrate rockcress) 69 36

Arabidopsis_thaliana_10 (Thale cress) 110 54

Carica_papaya_ (Papaya) 52 31

Medicago_truncatula_ (Barrel medic) 131 83

Phaseolus_vulgaris_v186 (French bean) 82 48

Glycine_max_v109 (Soybean) 156 94

Cucumis_sativus_v122 (Cucumber) 104 63

Fragaria_vesca_ (Wild strawberry) 67 35

Malus_domestica_v196 (Apple) 117 59

Prunus_persica_v139 (Peach) 64 35

Linum_usitatissimum_v200 (Flax) 98 60

Manihot_esculenta_v147 (Cassava) 102 52

Populus_trichocarpa_v156 (Black cottonwood) 146 78

Vitis_vinifera_ (Wine grape) 68 37

Mimulus_guttatus_v140 (Spotted monkey flower) 80 40

Solanum_lycopersicum_v.2.3 (Tomato) 75 45

Solanum_tuberosum_ (Potato) 97 59

Actinidia_chinensis_Hongyang_ 99 59

Aquilegia_coerulea_v195 153 84

Triticum_urartu_22 59 40

Triticum_aestivum_22 (Bread wheat) 176 111

Aegilops_tauschii_22 50 30

Brachypodium_distachyon_ (Stiff brome) 86 56

Oryza_barthii_22 (African wild rice) 109 63

Oryza_meridionalis_22 112 63

Oryza_glumaepatula_22 120 67

Oryza_glaberrima (African rice) 62 33

Oryza_punctata_22 118 65

Oryza_nivara_22 123 76

Oryza_brachyantha_22 (Malo sina) 68 42

Oryza_sativa_ssp._japonica_5.0 (Japanese rice) 128 76

Oryza_sativa_v193 (Rice) 121 74

Phyllostachys_heterocyclavar._pubescens (Kikko-chiku) 101 56

Panicum_virgatum_v202 (Switchgrass) 156 91

Setaria_italica_v164 (Foxtail millet) 95 56

Zea_mays_subsp._mays_ (Maize) 159 94

Zea_mays_v181 (Maize) 164 100

Sorghum_bicolor_ (Sorghum) 69 38

Musa_balbisiana (Balbis banana) 138 73

Musa_acuminata_22 (Wild Malaysian banana) 148 79

Amborella_trichopoda_22 48 30

Physcomitrella_patens 68 45

Coccomyxa_subellipsoidea_sp._C-169_v2 27 17

Asterochloris_sp._Cgr/DA1pho_v1.0 19 10

Chlorella_variabilis_sp._NC64A_ 18 11

Chlorella_vulgaris_ 26 16

Volvox_carteri_f._nagariensis_ 25 16

Volvox_carteri_v199 26 17

Chlamydomonas_reinhardtii_4.0 23 16

Ostreococcus_sp._RCC809_ 21 13

Ostreococcus_lucimarinus_CCE9901_ 20 12

Ostreococcus_tauri_ 17 11

Bathycoccus_prasinos_ 14 11

Micromonas_sp._RCC299_ 19 11

Micromonas_pusilla_CCMP1545_v3.0 21 12

Cyanidioschyzon_merolae_strain_10D_22 22 14

Cyanidioschyzon_merolae 22 14

Porphyridium_purpureum_02_2012 17 12

Thecamonas_trahens_ATCC_50062_ 9 6

Bigelowiella_natans_CCMP2755_22 13 9

Cyanophora_paradoxa_ 19 17

Leishmania_mexicana_2.4 2 2

Leishmania_major_strain_Friedlin_ 2 2

Leishmania_infantum_JPCM5_2.4 2 2

Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 2 2

Ectocarpus_siliculosus 10 8

Aureococcus_anophagefferens_ 23 16

Albugo_laibachii_22 19 13

Pythium_iwayamai_DAOM_BR242034_22 25 18

Pythium_arrhenomanes_ATCC_12531_22 23 16

Pythium_ultimum_v1.7-2 21 16

Pythium_aphanidermatum_DAOM_BR444_22 19 15

Pythium_irregulare_DAOM_BR486_22 26 19

Pythium_vexans_DAOM_BR484_22 24 19

Phytophthora_ramorum_1.1 (Sudden oak death agent) 27 22

Phytophthora_sojae_1.1 25 19

Phytophthora_infestans_T30-4_ 25 20

Phytophthora_capsici_ 30 23

Hyaloperonospora_arabidopsidis_22 23 19

Phaeodactylum_tricornutumCCAP_1055/1 18 13

Fragilariopsis_cylindrus 30 21

Thalassiosira_pseudonana_CCMP1335 17 13

Perkinsus_marinus_ATCC_50983_ 13 9

Paramecium_tetraurelia_ 9 9

Tetrahymena_thermophila_SB210_1_ 4 4

Ichthyophthirius_multifiliis_strain_G5_ 2 2

Neospora_caninum 4 3

Toxoplasma_gondii_VEG 3 2

Toxoplasma_gondii_ME49 3 2

Toxoplasma_gondii_GT1 3 2

Symbiodinium_minutum_clade_B1_v1.2 20 16

Naegleria_gruberi_ 4 4

Guillardia_theta_CCMP2712_v1.0_ 10 7

Emiliania_huxleyi_CCMP1516_ 32 24

Thermobaculum_terrenum_ATCC_BAA-798 9 7

Leptolyngbya_sp._PCC_7376 16 11

Pseudanabaena_sp._PCC_7367 13 9

Acaryochloris_marina_MBIC11017 15 10

Synechocystis_sp._PCC_6803 15 10

Thermosynechococcus_sp._NK55 12 8

Thermosynechococcus_elongatus_BP-1 12 8

Synechococcus_sp._PCC_7502 18 13

Synechococcus_sp._PCC_6312 14 10

Synechococcus_sp._CC9311 13 8

Synechococcus_elongatus_PCC_7942 14 10

Prochlorococcus_marinus_str._MIT_9515 13 8

Microcoleus_sp._PCC_7113 15 11

Trichodesmium_erythraeum_IMS101 12 8

Geitlerinema_sp._PCC_7407 16 12

Cyanothece_sp._PCC_8802 14 10

Gloeocapsa_sp._PCC_7428 17 12

cyanobacterium_UCYN-A 7 4

Halothece_sp._PCC_7418 11 7

Microcystis_aeruginosa_NIES-843 17 12

Gloeobacter_violaceus_PCC_7421 15 10

Rivularia_sp._PCC_7116 16 11

Calothrix_sp._PCC_7507 21 15

Anabaena_variabilis_ATCC_29413 16 12

'Nostoc_azollae'_0708 15 11

Nostoc_sp._PCC_7107 14 10

Nostoc_punctiforme_PCC_73102 17 13

Nostoc_sp._PCC_7120 15 11

Nostoc_sp._PCC_7524 14 10

Anabaena_sp._90 15 11

Mesoplasma_florum_L1 1 1

Mycoplasma_leachii_99/014/6 1 1

Mycoplasma_mycoides_subsp._capri_LC_str._95010 1 1

Mycoplasma_capricolum_subsp._capricolum_ATCC_27343 1 1

Mycoplasma_putrefaciens_KS1 1 1

Conexibacter_woesei_DSM_14684 12 10

Cryptobacterium_curtum_DSM_15641 12 10

Eggerthella_sp._YY7918 17 13

Eggerthella_lenta_DSM_2243 18 14

Slackia_heliotrinireducens_DSM_20476 15 11

Olsenella_uli_DSM_7084 7 6

Atopobium_parvulum_DSM_20469 5 4

Coriobacterium_glomerans_PW2 4 4

Rubrobacter_xylanophilus_DSM_9941 13 11

Ilumatobacter_coccineus 20 13

Acidimicrobium_ferrooxidans_DSM_10331 11 9

Thermobispora_bispora_DSM_43833 15 13

Nakamurella_multipartita_DSM_44233 17 13

Acidothermus_cellulolyticus_11B 14 11

Modestobacter_marinus 13 11

Blastococcus_saxobsidens_DD2 16 13

Geodermatophilus_obscurus_DSM_43160 17 14

Kineococcus_radiotolerans_SRS30216 14 11

Catenulispora_acidiphila_DSM_44928 15 12

Stackebrandtia_nassauensis_DSM_44728 11 9

Frankia_symbiont_of_Datisca_glomerata 13 11

Frankia_sp._EAN1pec 12 10

Frankia_alni_ACN14a 16 13

Thermobifida_fusca_YX 12 10

Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 14 11

Thermomonospora_curvata_DSM_43183 14 11

Streptosporangium_roseum_DSM_43021 19 15

Kitasatospora_setae_KM-6054 17 14

Streptomyces_coelicolor_A3(2) 14 12

Streptomyces_sp._PAMC26508 17 14

Streptomyces_flavogriseus_ATCC_33331 17 14

Streptomyces_sp._SirexAA-E 16 13

Streptomyces_griseus_subsp._griseus_NBRC_13350 14 12

Streptomyces_bingchenggensis_BCW-1 16 14

Streptomyces_violaceusniger_Tu_4113 17 15

Streptomyces_avermitilis_MA-4680 13 11

Streptomyces_cattleya_NRRL_8057_=_DSM_46488 17 14

Streptomyces_scabiei_87.22 14 12

Streptomyces_hygroscopicus_subsp._jinggangensis_5008 18 15

Actinosynnema_mirum_DSM_43827 15 12

Saccharomonospora_viridis_DSM_43017 19 16

Pseudonocardia_dioxanivorans_CB1190 16 14

Saccharopolyspora_erythraea_NRRL_2338 17 15

Amycolatopsis_mediterranei_U32 17 14

Kribbella_flavida_DSM_17836 16 13

Nocardioides_sp._JS614 16 13

Propionibacterium_propionicum_F0230a 11 9

Propionibacterium_acnes_SK137 11 9

Microlunatus_phosphovorus_NM-1 16 12

Propionibacterium_freudenreichii_subsp._shermanii_CIRM-BIA1 12 10

Salinispora_arenicola_CNS-205 15 11

Salinispora_tropica_CNB-440 14 10

Verrucosispora_maris_AB-18-032 14 11

Micromonospora_sp._L5 16 12

Micromonospora_aurantiaca_ATCC_27029 16 12

Actinoplanes_sp._N902-109 16 13

Actinoplanes_sp._SE50/110 17 14

Actinoplanes_missouriensis_431 20 15

Segniliparus_rotundus_DSM_44985 14 12

Tsukamurella_paurometabola_DSM_20162 13 11

Gordonia_sp._KTR9 14 12

Gordonia_polyisoprenivorans_VH2 15 13

Gordonia_bronchialis_DSM_43247 12 10

Rhodococcus_jostii_RHA1 17 14

Rhodococcus_equi_103S 14 11

Rhodococcus_opacus_B4 15 12

Rhodococcus_erythropolis_PR4 14 11

Nocardia_cyriacigeorgica_GUH-2 14 11

Nocardia_farcinica_IFM_10152 15 12

Amycolicicoccus_subflavus_DQS3-9A1 14 12

Mycobacterium_massiliense_str._GO_06 14 11

Mycobacterium_abscessus_ATCC_19977 15 12

Mycobacterium_sp._JLS 13 10

Mycobacterium_intracellulare_ATCC_13950 12 9

Mycobacterium_avium_104 12 9

Mycobacterium_vanbaalenii_PYR-1 13 10

Mycobacterium_canettii_CIPT_140010059 12 10

Mycobacterium_africanum_GM041182 12 10

Mycobacterium_tuberculosis_KZN_1435 11 9

Mycobacterium_tuberculosis 12 10

Mycobacterium_bovis_BCG_str._Pasteur_1173P2 12 10

Mycobacterium_rhodesiae_NBB3 12 9

Mycobacterium_ulcerans_Agy99 10 8

Mycobacterium_gilvum_PYR-GCK 12 10

Mycobacterium_chubuense_NBB4 13 10

Mycobacterium_marinum_M 12 10

Mycobacterium_smegmatis_str._MC2_155 15 12

Mycobacterium_leprae_Br4923 10 8

Corynebacterium_resistens_DSM_45100 13 10

Corynebacterium_aurimucosum_ATCC_700975 12 10

Corynebacterium_kroppenstedtii_DSM_44385 14 11

Corynebacterium_efficiens_YS-314 12 10

Corynebacterium_ulcerans_0102 12 10

Corynebacterium_urealyticum_DSM_7109 14 11

Corynebacterium_jeikeium_K411 13 10

Corynebacterium_variabile_DSM_44702 16 13

Corynebacterium_pseudotuberculosis_316 12 10

Corynebacterium_glutamicum_R 11 9

Corynebacterium_diphtheriae_NCTC_13129 12 10

Tropheryma_whipplei_TW08/27 6 5

Sanguibacter_keddieii_DSM_10542 11 9

Kytococcus_sedentarius_DSM_20547 7 5

Beutenbergia_cavernae_DSM_12333 12 10

Leifsonia_xyli_subsp._xyli_str._CTCB07 11 9

Microbacterium_testaceum_StLB037 12 9

Clavibacter_michiganensis_subsp._michiganensis_NCPPB_382 11 9

Jonesia_denitrificans_DSM_20603 10 8

Intrasporangium_calvum_DSM_43043 17 12

Brachybacterium_faecium_DSM_4810 12 9

Isoptericola_variabilis_225 11 9

Xylanimonas_cellulosilytica_DSM_15894 11 9

Cellulomonas_flavigena_DSM_20109 11 9

Cellulomonas_fimi_ATCC_484 12 10

[Cellvibrio]_gilvus_ATCC_13127 12 10

Arthrobacter_phenanthrenivorans_Sphe3 17 14

Arthrobacter_chlorophenolicus_A6 17 14

Arthrobacter_aurescens_TC1 18 15

Arthrobacter_arilaitensis_Re117 15 13

Kocuria_rhizophila_DC2201 13 11

Rothia_mucilaginosa_DY-18 11 9

Rothia_dentocariosa_ATCC_17931 11 9

Arthrobacter_sp._Rue61a 17 14

Arthrobacter_sp._FB24 18 15

Renibacterium_salmoninarum_ATCC_33209 11 9

Micrococcus_luteus_NCTC_2665 11 9

Gardnerella_vaginalis_409-05 3 3

Bifidobacterium_longum_subsp._longum_JDM301 11 9

Bifidobacterium_animalis_subsp._lactis_Bl-04 11 9

Bifidobacterium_dentium_Bd1 12 10

Bifidobacterium_breve_ACS-071-V-Sch8b 9 8

Bifidobacterium_bifidum_S17 11 9

Bifidobacterium_adolescentis_ATCC_15703 9 7

Arcanobacterium_haemolyticum_DSM_20595 2 2

Mobiluncus_curtisii_ATCC_43063 13 10

Actinomyces_sp._F0330 10 8

Caldilinea_aerophila_DSM_14535_=_NBRC_104270 8 6

Dehalococcoides_ethenogenes_195 13 10

Dehalococcoides_sp._BAV1 13 10

Dehalogenimonas_lykanthroporepellens_BL-DC-9 10 8

Anaerolinea_thermophila_UNI-1 12 9

Thermomicrobium_roseum_DSM_5159 7 5

Sphaerobacter_thermophilus_DSM_20745 8 6

Herpetosiphon_aurantiacus_DSM_785 9 6

Roseiflexus_sp._RS-1 11 9

Roseiflexus_castenholzii_DSM_13941 11 9

Chloroflexus_sp._MS-G 11 8

Chloroflexus_sp._Y-400-fl 9 7

Chloroflexus_aggregans_DSM_9485 11 8

Chloroflexus_aurantiacus_J-10-fl 11 8

Truepera_radiovictrix_DSM_17093 10 8

Deinococcus_gobiensis_I-0 13 10

Deinococcus_deserti_VCD115 14 10

Deinococcus_maricopensis_DSM_21211 14 10

Deinococcus_geothermalis_DSM_11300 11 9

Deinococcus_proteolyticus_MRP 12 8

Deinococcus_radiodurans_R1 14 10

Oceanithermus_profundus_DSM_14977 11 9

Marinithermus_hydrothermalis_DSM_14884 10 8

Meiothermus_silvanus_DSM_9946 12 9

Meiothermus_ruber_DSM_1279 9 7

Thermus_sp._CCB_US3_UF1 11 9

Thermus_scotoductus_SA-01 10 8

Thermus_thermophilus_HB27 9 7

Anaerococcus_prevotii_DSM_20548 4 4

Finegoldia_magna_ATCC_29328 5 4

Veillonella_parvula_DSM_2008 15 12

Megasphaera_elsdenii_DSM_20460 18 14

Acidaminococcus_intestini_RyC-MR95 19 16

Acidaminococcus_fermentans_DSM_20731 22 18

Megamonas_hypermegale 11 9

Selenomonas_sputigena_ATCC_35185 14 11

Selenomonas_ruminantium_subsp._lactilytica_TAM6421 21 16

Erysipelothrix_rhusiopathiae_str._Fujisawa 3 3

Natranaerobius_thermophilus_JW/NM-WN-LF 5 4

Symbiobacterium_thermophilum_IAM_14863 14 11

Clostridiales_genomosp._BVAB3_str._UPII9-5 5 4

Clostridium_clariflavum_DSM_19732 18 14

Eubacterium_siraeum 17 12

Clostridium_cellulolyticum_H10 16 12

Clostridium_thermocellum_ATCC_27405 17 13

Ethanoligenens_harbinense_YUAN-3 13 10

Faecalibacterium_prausnitzii 11 8

Ruminococcus_sp. 20 14

Ruminococcus_bromii 8 6

Ruminococcus_albus_7 17 12

Thermaerobacter_marianensis_DSM_12885 9 6

Sulfobacillus_acidophilus_DSM_10332 11 9

Oscillibacter_valericigenes_Sjm18-20 10 9

butyrate-producing_bacterium_SS3/4 15 12

butyrate-producing_bacterium_SM4/1 6 4

Candidatus_Desulforudis_audaxviator_MP104C 18 14

Thermincola_potens_JR 18 14

Pelotomaculum_thermopropionicum_SI 21 16

Desulfosporosinus_acidiphilus_SJ4 21 16

Desulfosporosinus_orientis_DSM_765 24 19

Dehalobacter_sp._DCA 18 14

Dehalobacter_sp._CF 18 14

Syntrophobotulus_glycolicus_DSM_8271 16 12

Desulfitobacterium_hafniense_Y51 23 17

Desulfitobacterium_dehalogenans_ATCC_51507 22 17

Desulfotomaculum_reducens_MI-1 25 20

Desulfotomaculum_acetoxidans_DSM_771 18 13

Desulfotomaculum_kuznetsovii_DSM_6115 19 15

Desulfotomaculum_carboxydivorans_CO-1-SRB 24 19

Desulfotomaculum_ruminis_DSM_2154 28 22

Acetobacterium_woodii_DSM_1030 20 15

Eubacterium_eligens_ATCC_27750 12 10

Eubacterium_limosum_KIST612 24 17

Clostridium_difficile_630 11 9

Clostridium_sticklandii_DSM_519 11 10

Filifactor_alocis_ATCC_35896 9 8

Clostridium_saccharolyticum_WM1 19 15

Clostridium_phytofermentans_ISDg 23 17

Clostridium_lentocellum_DSM_5427 25 20

[Ruminococcus]_obeum 21 16

[Ruminococcus]_torques 18 14

Eubacterium_rectale_M104/1 13 10

Eubacterium_rectale_ATCC_33656 14 11

Coprococcus_sp._ART55/1 11 8

Roseburia_hominis_A2-183 17 14

Roseburia_intestinalis 16 13

Butyrivibrio_proteoclasticus_B316 19 14

Butyrivibrio_fibrisolvens 14 11

Syntrophothermus_lipocalidus_DSM_12680 16 13

Syntrophomonas_wolfei_subsp._wolfei_str._Goettingen 16 13

Heliobacterium_modesticaldum_Ice1 18 13

Alkaliphilus_oremlandii_OhILAs 9 8

Alkaliphilus_metalliredigens_QYMF 25 21

Candidatus_Arthromitus_sp._SFB-mouse-Japan 3 2

Clostridium_sp._BNL1100 19 15

Clostridium_novyi_NT 14 12

Clostridium_ljungdahlii_DSM_13528 19 16

Clostridium_kluyveri_DSM_555 14 12

Clostridium_beijerinckii_NCIMB_8052 19 15

Clostridium_tetani_E88 12 10

Clostridium_perfringens_ATCC_13124 9 9

Clostridium_cellulovorans_743B 20 14

Clostridium_botulinum_A_str._ATCC_3502 16 13

Clostridium_acetobutylicum_ATCC_824 15 12

Mahella_australiensis_50-1_BON 15 11

Thermosediminibacter_oceani_DSM_16646 9 8

Caldicellulosiruptor_obsidiansis_OB47 15 11

Caldicellulosiruptor_kronotskyensis_2002 15 11

Caldicellulosiruptor_hydrothermalis_108 17 13

Caldicellulosiruptor_owensensis_OL 15 11

Caldicellulosiruptor_lactoaceticus_6A 15 11

Caldicellulosiruptor_kristjanssonii_177R1B 16 12

Caldicellulosiruptor_saccharolyticus_DSM_8903 15 11

Caldicellulosiruptor_bescii_DSM_6725 15 11

Thermoanaerobacterium_xylanolyticum_LX-11 15 13

Thermoanaerobacterium_thermosaccharolyticum_DSM_571 15 13

Thermodesulfobium_narugense_DSM_14796 15 12

Coprothermobacter_proteolyticus_DSM_5265 4 3

Tepidanaerobacter_acetatoxydans_Re1 16 13

Thermoanaerobacter_tengcongensis_MB4 13 11

Carboxydothermus_hydrogenoformans_Z-2901 24 19

Moorella_thermoacetica_ATCC_39073 19 14

Ammonifex_degensii_KC4 16 13

Thermoanaerobacter_mathranii_subsp._mathranii_str._A3 15 13

Thermoanaerobacter_pseudethanolicus_ATCC_33223 14 12

Thermoanaerobacter_sp._X514 14 12

Thermoanaerobacter_italicus_Ab9 15 13

Thermoanaerobacter_wiegelii_Rt8.B1 14 12

Thermoanaerobacter_brockii_subsp._finnii_Ako-1 14 12

Acetohalobium_arabaticum_DSM_5501 23 18

Halothermothrix_orenii_H_168 18 15

Halanaerobium_hydrogeniformans 13 11

Halanaerobium_praevalens_DSM_2228 9 8

Carnobacterium_sp._17-4 10 8

Carnobacterium_sp._WN1359 10 8

Aerococcus_urinae_ACS-120-V-Col10a 6 5

Tetragenococcus_halophilus_NBRC_12172 8 7

Melissococcus_plutonius_DAT561 2 2

Enterococcus_sp._7L76 6 6

Enterococcus_hirae_ATCC_9790 8 7

Enterococcus_faecium_Aus0004 9 8

Enterococcus_faecalis_62 10 9

Weissella_koreensis_KACC_15510 1 1

Oenococcus_oeni_PSU-1 7 6

Leuconostoc_sp._C2 7 6

Leuconostoc_kimchii_IMSNU_11154 7 6

Leuconostoc_citreum_KM20 7 6

Leuconostoc_mesenteroides_subsp._mesenteroides_ATCC_8293 10 8

Leuconostoc_gasicomitatum_LMG_18811 7 6

Lactobacillus_casei_ATCC_334 9 7

Lactobacillus_kefiranofaciens_ZW3 6 4

Lactobacillus_crispatus_ST1 6 4

Lactobacillus_rhamnosus_Lc_705 9 7

Lactobacillus_johnsonii_FI9785 4 3

Lactobacillus_sanfranciscensis_TMW_1.1304 5 4

Lactobacillus_salivarius_CECT_5713 6 5

Lactobacillus_ruminis_ATCC_27782 11 9

Lactobacillus_fermentum_IFO_3956 8 7

Lactobacillus_amylovorus_GRL1118 5 4

Lactobacillus_sakei_subsp._sakei_23K 2 2

Lactobacillus_reuteri_DSM_20016 4 3

Lactobacillus_gasseri_ATCC_33323 4 3

Lactobacillus_plantarum_JDM1 12 10

Lactobacillus_helveticus_DPC_4571 8 7

Lactobacillus_delbrueckii_subsp._bulgaricus_ATCC_BAA-365 6 5

Lactobacillus_buchneri_NRRL_B-30929 11 9

Lactobacillus_buchneri 11 9

Lactobacillus_brevis_ATCC_367 2 2

Lactobacillus_acidophilus_30SC 6 4

Pediococcus_claussenii_ATCC_BAA-344 5 4

Pediococcus_pentosaceus_ATCC_25745 4 3

Lactococcus_garvieae_ATCC_49156 3 3

Lactococcus_lactis_subsp._cremoris_MG1363 11 9

Streptococcus_sp._I-P16 12 10

Streptococcus_sp._I-G2 12 10

Streptococcus_intermedius_JTH08 8 7

Streptococcus_gallolyticus_UCN34 16 13

Streptococcus_pseudopneumoniae_IS7493 12 10

Streptococcus_pasteurianus_ATCC_43144 13 11

Streptococcus_equi_subsp._equi_4047 6 5

Streptococcus_dysgalactiae_subsp._equisimilis_GGS_124 6 5

Streptococcus_infantarius_subsp._infantarius_CJ18 15 12

Streptococcus_macedonicus_ACA-DC_198 15 12

Streptococcus_mitis_B6 12 10

Streptococcus_uberis_0140J 9 8

Streptococcus_parauberis_KCTC_11537 9 8

Streptococcus_parasanguinis_ATCC_15912 12 10

Streptococcus_pyogenes_str._Manfredo 3 3

Streptococcus_pneumoniae_P1031 12 10

Streptococcus_agalactiae_A909 6 5

Streptococcus_mutans_NN2025 11 9

Streptococcus_thermophilus_LMD-9 12 10

Streptococcus_suis_P1/7 13 11

Streptococcus_sanguinis_SK36 13 11

Streptococcus_salivarius_57.I 13 11

Streptococcus_oralis_Uo5 12 10

Streptococcus_gordonii_str._Challis_substr._CH1 12 10

Exiguobacterium_sp._MH3 10 9

Exiguobacterium_sp._AT1b 9 8

Exiguobacterium_sibiricum_255-15 10 9

Kyrpidia_tusciae_DSM_2912 17 14

Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_DSM_446 13 10

Brevibacillus_brevis_NBRC_100599 22 18

Paenibacillus_sp._JDR-2 20 16

Paenibacillus_terrae_HPL-003 18 15

Paenibacillus_mucilaginosus_3016 20 16

Paenibacillus_polymyxa_M1 19 16

Bacillus_selenitireducens_MLS10 19 15

Listeria_welshimeri_serovar_6b_str._SLCC5334 18 14

Listeria_innocua_Clip11262 18 14

Listeria_seeligeri_serovar_1/2b_str._SLCC3954 18 14

Listeria_monocytogenes_serotype_4b_str._CLIP_80459 18 14

Listeria_ivanovii_subsp._ivanovii_PAM_55 16 13

Solibacillus_silvestris_StLB046 16 13

Geobacillus_thermoglucosidasius_C56-YS93 24 20

Lysinibacillus_sphaericus_C3-41 16 13

Oceanobacillus_iheyensis_HTE831 19 16

Anoxybacillus_flavithermus_WK1 21 17

Geobacillus_thermoleovorans_CCB_US3_UF5 19 16

Geobacillus_kaustophilus_HTA426 18 15

Geobacillus_sp._GHH01 19 16

Geobacillus_sp._WCH70 21 17

Geobacillus_thermodenitrificans_NG80-2 19 16

Halobacillus_halophilus_DSM_2266 19 16

Bacillus_sp._JS 18 14

Bacillus_sp._1NLA3E 27 23

Bacillus_amyloliquefaciens_FZB42 18 14

Bacillus_atrophaeus_1942 18 14

Bacillus_subtilis_subsp._subtilis_str._168 17 13

Bacillus_licheniformis_DSM_13_=_ATCC_14580 20 16

Bacillus_halodurans_C-125 20 16

Bacillus_weihenstephanensis_KBAB4 20 17

Bacillus_thuringiensis_str._Al_Hakam 20 17

Bacillus_cereus_03BB102 20 17

Bacillus_anthracis_str._A0248 20 17

Bacillus_pseudofirmus_OF4 22 18

Bacillus_clausii_KSM-K16 20 17

Bacillus_cellulosilyticus_DSM_2522 21 17

Bacillus_pumilus_SAFR-032 18 14

Bacillus_megaterium_DSM_319 24 20

Bacillus_coagulans_2-6 16 13

Macrococcus_caseolyticus_JCSC5402 12 10

Staphylococcus_pseudintermedius_HKU10-03 14 12

Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305 15 12

Staphylococcus_lugdunensis_HKU09-01 14 12

Staphylococcus_haemolyticus_JCSC1435 11 9

Staphylococcus_epidermidis_RP62A 14 12

Staphylococcus_carnosus_subsp._carnosus_TM300 16 13

Staphylococcus_aureus_subsp._aureus_JH1 14 12

Staphylococcus_aureus 12 10

Candidatus_Cloacamonas_acidaminovorans 2 2

Gemmatimonas_aurantiaca_T-27 7 5

Melioribacter_roseus_P3M 16 12

Ignavibacterium_album_JCM_16511 9 8

Pelodictyon_phaeoclathratiforme_BU-1 13 9

Chlorobium_luteolum_DSM_273 12 8

Chlorobium_chlorochromatii_CaD3 10 7

Chlorobium_phaeobacteroides_DSM_266 14 10

Chlorobium_phaeovibrioides_DSM_265 10 7

Chlorobium_limicola_DSM_245 14 10

Chlorobaculum_parvum_NCIB_8327 12 8

Chlorobium_tepidum_TLS 13 9

Chloroherpeton_thalassium_ATCC_35110 11 8

Prosthecochloris_aestuarii_DSM_271 11 8

Haliscomenobacter_hydrossis_DSM_1100 10 6

Niastella_koreensis_GR20-10 11 8

Chitinophaga_pinensis_DSM_2588 14 10

Salinibacter_ruber_M8 10 7

Rhodothermus_marinus_DSM_4252 10 8

Flexibacter_litoralis_DSM_6794 7 5

Belliella_baltica_DSM_15883 11 8

Cyclobacterium_marinum_DSM_745 10 7

Marivirga_tractuosa_DSM_4126 10 7

Fibrella_aestuarina 14 11

Leadbetterella_byssophila_DSM_17132 11 8

Dyadobacter_fermentans_DSM_18053 12 9

Cytophaga_hutchinsonii_ATCC_33406 9 7

Spirosoma_linguale_DSM_74 12 9

Runella_slithyformis_DSM_19594 10 7

Parabacteroides_distasonis_ATCC_8503 16 10

Tannerella_forsythia_ATCC_43037 8 5

Paludibacter_propionicigenes_WB4 13 9

Odoribacter_splanchnicus_DSM_20712 9 7

Candidatus_Azobacteroides_pseudotrichonymphae_genomovar._CFP2 7 4

Bacteroides_sp._CF50 9 6

Prevotella_melaninogenica_ATCC_25845 7 5

Prevotella_intermedia_17 4 3

Prevotella_denticola_F0289 7 5

Prevotella_ruminicola_23 13 9

Porphyromonas_asaccharolytica_DSM_20707 3 3

Porphyromonas_gingivalis_ATCC_33277 3 2

Alistipes_finegoldii_DSM_17242 7 6

Bacteroides_salanitronis_DSM_18170 16 10

Bacteroides_helcogenes_P_36-108 14 9

Bacteroides_vulgatus_ATCC_8482 19 12

Bacteroides_thetaiotaomicron_VPI-5482 17 11

Bacteroides_fragilis_YCH46 15 9

Pedobacter_saltans_DSM_12145 12 9

Solitalea_canadensis_DSM_3403 12 9

Pedobacter_heparinus_DSM_2366 12 9

Sphingobacterium_sp._21 13 10

Fluviicola_taffensis_DSM_16823 1 1

Candidatus_Sulcia_muelleri_DMIN 5 4

Candidatus_Sulcia_muelleri_SMDSEM 3 2

Owenweeksia_hongkongensis_DSM_17368 2 2

Zunongwangia_profunda_SM-A87 13 9

Krokinobacter_sp._4H-3-7-5 10 7

Gramella_forsetii_KT0803 13 9

Lacinutrix_sp._5H-3-7-4 11 8

Maribacter_sp._HTCC2170 10 8

Robiginitalea_biformata_HTCC2501 10 8

Croceibacter_atlanticus_HTCC2559 4 3

Aequorivita_sublithincola_DSM_14238 3 3

Zobellia_galactanivorans 12 9

Muricauda_ruestringensis_DSM_13258 11 8

Cellulophaga_algicola_DSM_14237 10 8

Cellulophaga_lytica_DSM_7489 10 8

Flavobacteriaceae_bacterium_3519-10 3 3

Polaribacter_sp._MED152 11 8

Riemerella_anatipestifer_ATCC_11845_=_DSM_15868 4 4

Ornithobacterium_rhinotracheale_DSM_15997 6 5

Capnocytophaga_canimorsus_Cc5 7 5

Capnocytophaga_ochracea_DSM_7271 5 4

Weeksella_virosa_DSM_16922 5 4

Flavobacterium_indicum_GPTSA100-9 9 7

Flavobacterium_psychrophilum_JIP02/86 6 5

Flavobacterium_branchiophilum_FL-15 10 7

Flavobacterium_columnare_ATCC_49512 6 5

Flavobacterium_johnsoniae_UW101 17 12

Blattabacterium_sp._(Nauphoeta_cinerea) 3 2

Blattabacterium_sp._(Blattella_germanica)_str._Bge 3 2

Fibrobacter_succinogenes_subsp._succinogenes_S85 11 8

Waddlia_chondrophila_WSU_86-1044 2 2

Candidatus_Protochlamydia_amoebophila_UWE25 1 1

Simkania_negevensis_Z 1 1

Chlamydophila_pecorum_E58 1 1

Chlamydophila_pneumoniae_TW-183 1 1

Chlamydophila_caviae_GPIC 1 1

Chlamydophila_felis_Fe/C-56 1 1

Chlamydophila_abortus_S26/3 1 1

Chlamydia_psittaci_01DC11 1 1

Phycisphaera_mikurensis_NBRC_102666 8 6

Isosphaera_pallida_ATCC_43644 10 6

Planctomyces_brasiliensis_DSM_5305 14 9

Planctomyces_limnophilus_DSM_3776 16 10

Rhodopirellula_baltica_SH_1 19 12

Pirellula_staleyi_DSM_6068 13 8

Methylacidiphilum_infernorum_V4 11 8

Coraliomargarita_akajimensis_DSM_45221 16 11

Opitutus_terrae_PB90-1 19 13

Akkermansia_muciniphila_ATCC_BAA-835 9 7

Fretibacterium_fastidiosum 3 2

Thermovirga_lienii_DSM_17291 9 7

Aminobacterium_colombiense_DSM_12261 6 5

Thermanaerovibrio_acidaminovorans_DSM_6589 8 6

Anaerobaculum_mobile_DSM_13181 10 7

Turneriella_parva_DSM_21527 10 8

Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._L550 10 8

Leptospira_interrogans_serovar_Lai_str._IPAV 10 8

Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 11 8

Brachyspira_murdochii_DSM_12563 9 7

Brachyspira_intermedia_PWS/A 9 7

Brachyspira_pilosicoli_95/1000 9 7

Brachyspira_hyodysenteriae_WA1 9 7

Spirochaeta_smaragdinae_DSM_11293 15 10

Sphaerochaeta_pleomorpha_str._Grapes 10 8

Sphaerochaeta_globus_str._Buddy 13 10

Sphaerochaeta_coccoides_DSM_17374 11 9

Spirochaeta_caldaria_DSM_7334 21 14

Treponema_azotonutricium_ZAS-9 15 11

Treponema_primitia_ZAS-2 14 10

Treponema_brennaborense_DSM_12168 15 11

Treponema_succinifaciens_DSM_2489 10 7

Treponema_denticola_ATCC_35405 1 1

Spirochaeta_africana_DSM_8902 14 10

Spirochaeta_thermophila_DSM_6192 12 9

Thermodesulfatator_indicus_DSM_15286 16 12

Thermodesulfobacterium_sp._OPB45 16 11

Desulfurispirillum_indicum_S5 14 11

Calditerrivibrio_nitroreducens_DSM_19672 15 11

Denitrovibrio_acetiphilus_DSM_12809 17 12

Deferribacter_desulfuricans_SSM1 18 13

Flexistipes_sinusarabici_DSM_4947 18 13

Marinitoga_piezophila_KA3 6 5

Petrotoga_mobilis_SJ95 9 7

Mesotoga_prima_MesG1.Ag.4.2 10 7

Kosmotoga_olearia_TBF_19.5.1 5 4

Fervidobacterium_pennivorans_DSM_9078 8 6

Fervidobacterium_nodosum_Rt17-B1 8 6

Thermosipho_melanesiensis_BI429 5 4

Thermosipho_africanus_TCF52B 5 4

Thermotoga_lettingae_TMO 8 6

Thermotoga_thermarum_DSM_5069 10 8

Thermotoga_sp._RQ2 12 9

Thermotoga_naphthophila_RKU-10 12 9

Thermotoga_petrophila_RKU-1 12 9

Thermotoga_neapolitana_DSM_4359 11 8

Thermotoga_maritima_MSB8 12 9

Thermovibrio_ammonificans_HB-1 12 10

Desulfurobacterium_thermolithotrophum_DSM_11699 14 11

Sulfurihydrogenibium_sp._YO3AOP1 12 9

Sulfurihydrogenibium_azorense_Az-Fu1 13 10

Persephonella_marina_EX-H1 13 10

Hydrogenobaculum_sp._SN 12 9

Hydrogenobaculum_sp._HO 12 9

Hydrogenobaculum_sp._Y04AAS1 12 9

Thermocrinis_albus_DSM_14484 10 8

Aquifex_aeolicus_VF5 9 7

Hydrogenobacter_thermophilus_TK-6 12 9

Elusimicrobium_minutum_Pei191 4 3

uncultured_Termite_group_1_bacterium_phylotype_Rs-D17 7 5

Dictyoglomus_turgidum_DSM_6724 13 11

Dictyoglomus_thermophilum_H-6-12 12 10

Caldisericum_exile_AZM16c01 4 3

Candidatus_Chloracidobacterium_thermophilum_B 5 4

Candidatus_Solibacter_usitatus_Ellin6076 17 13

Granulicella_tundricola_MP5ACTX9 10 7

Granulicella_mallensis_MP5ACTX8 10 8

Candidatus_Koribacter_versatilis_Ellin345 16 11

Terriglobus_saanensis_SP1PR4 12 9

Terriglobus_roseus_DSM_18391 15 10

Acidobacterium_capsulatum_ATCC_51196 11 8

Thermodesulfovibrio_yellowstonii_DSM_11347 15 11

Candidatus_Nitrospira_defluvii 17 12

Leptospirillum_ferrooxidans_C2-3 10 8

Streptobacillus_moniliformis_DSM_12112 6 5

Sebaldella_termitidis_ATCC_33386 20 14

Leptotrichia_buccalis_C-1013-b 11 8

Ilyobacter_polytropus_DSM_2926 19 14

Fusobacterium_nucleatum_subsp._nucleatum_ATCC_25586 4 4

Candidatus_Methylomirabilis_oxyfera 14 11

Candidatus_Saccharimonas_aalborgensis 1 1

Acidithiobacillus_ferrivorans_SS3 13 8

Acidithiobacillus_caldus_SM-1 13 8

Acidithiobacillus_ferrooxidans_ATCC_53993 15 10

Bacteriovorax_marinus_SJ 6 5

Bdellovibrio_bacteriovorus_HD100 6 5

Nautilia_profundicola_AmH 12 9

Nitratifractor_salsuginis_DSM_16511 11 9

Sulfurospirillum_deleyianum_DSM_6946 12 10

Sulfurospirillum_barnesii_SES-3 12 10

Arcobacter_sp._L 11 9

Arcobacter_nitrofigilis_DSM_7299 11 8

Arcobacter_butzleri_RM4018 9 7

Campylobacter_hominis_ATCC_BAA-381 12 10

Campylobacter_lari_RM2100 11 9

Campylobacter_curvus_525.92 12 10

Campylobacter_concisus_13826 13 11

Campylobacter_jejuni_subsp._doylei_269.97 10 8

Campylobacter_sp._03-427 11 9

Campylobacter_fetus_subsp._fetus_82-40 11 9

uncultured_Sulfuricurvum_sp._RIFRC-1 11 9

Sulfuricurvum_kujiense_DSM_16994 9 7

Sulfurimonas_autotrophica_DSM_16294 9 7

Sulfurimonas_denitrificans_DSM_1251 10 8

Wolinella_succinogenes_DSM_1740 18 13

Helicobacter_cetorum_MIT_00-7128 8 7

Helicobacter_bizzozeronii_CIII-1 4 3

Helicobacter_hepaticus_ATCC_51449 12 10

Helicobacter_mustelae_12198 12 10

Helicobacter_felis_ATCC_49179 4 3

Helicobacter_cinaedi_PAGU611 11 9

Helicobacter_acinonychis_str._Sheeba 7 6

Helicobacter_pylori_B38 7 6

Nitratiruptor_sp._SB155-2 10 8

Sulfurovum_sp._NBC37-1 10 8

Desulfarculus_baarsii_DSM_2075 11 8

Desulfobacca_acetoxidans_DSM_11109 14 11

Syntrophus_aciditrophicus_SB 17 12

Desulfomonile_tiedjei_DSM_6799 19 14

Syntrophobacter_fumaroxidans_MPOB 29 20

Desulfurivibrio_alkaliphilus_AHT2 12 9

Desulfotalea_psychrophila_LSv54 19 13

Desulfobulbus_propionicus_DSM_2032 18 14

Desulfatibacillum_alkenivorans_AK-01 21 14

Desulfobacterium_autotrophicum_HRM2 23 15

Desulfococcus_oleovorans_Hxd3 17 12

Desulfohalobium_retbaense_DSM_5692 17 13

Desulfomicrobium_baculatum_DSM_4028 22 16

Desulfovibrio_piezophilus 19 14

Desulfovibrio_aespoeensis_Aspo-2 22 17

Lawsonia_intracellularis_PHE/MN1-00 6 4

Desulfovibrio_magneticus_RS-1 19 16

Desulfovibrio_alaskensis_G20 19 14

Desulfovibrio_vulgaris_subsp._vulgaris_DP4 20 15

Desulfovibrio_salexigens_DSM_2638 20 16

Desulfovibrio_desulfuricans_subsp._desulfuricans_str._ATCC_27774 17 11

Desulfovibrio_africanus_str._Walvis_Bay 18 13

Hippea_maritima_DSM_10411 19 12

Geobacter_daltonii_FRC-32 16 10

Geobacter_sp._M21 18 12

Geobacter_uraniireducens_Rf4 16 11

Geobacter_lovleyi_SZ 18 12

Geobacter_bemidjiensis_Bem 18 12

Geobacter_sulfurreducens_KN400 17 12

Geobacter_metallireducens_GS-15 15 10

Pelobacter_propionicus_DSM_2379 19 13

Pelobacter_carbinolicus_DSM_2380 23 16

Haliangium_ochraceum_DSM_14365 12 9

Sorangium_cellulosum_'So_ce_56' 21 16

Anaeromyxobacter_sp._Fw109-5 19 13

Anaeromyxobacter_dehalogenans_2CP-1 18 13

Stigmatella_aurantiaca_DW4/3-1 15 11

Corallococcus_coralloides_DSM_2259 12 10

Myxococcus_xanthus_DK_1622 12 9

Myxococcus_fulvus_HW-1 12 9

Dechloromonas_aromatica_RCB 16 12

Thauera_sp._MZ1T 19 13

Azoarcus_sp._KH32C 17 13

Azoarcus_sp._BH72 16 12

Aromatoleum_aromaticum_EbN1 17 12

Dechlorosoma_suillum_PS 16 12

Pseudogulbenkiania_sp._NH8B 16 13

Laribacter_hongkongensis_HLHK9 14 11

Chromobacterium_violaceum_ATCC_12472 12 9

Neisseria_meningitidis_alpha14 12 9

Neisseria_meningitidis_FAM18 12 9

Neisseria_lactamica_020-06 12 9

Neisseria_gonorrhoeae_NCCP11945 12 9

Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 19 14

beta_proteobacterium_CB 12 9

Methylibium_petroleiphilum_PM1 16 12

Thiomonas_arsenitoxydans 13 9

Thiomonas_intermedia_K12 13 9

Rubrivivax_gelatinosus_IL144 14 11

Leptothrix_cholodnii_SP-6 16 12

Burkholderia_rhizoxinica_HKI_454 12 9

Burkholderia_phytofirmans_PsJN 18 14

Burkholderia_phymatum_STM815 15 12

Burkholderia_xenovorans_LB400 21 16

Ralstonia_eutropha_JMP134 16 13

Cupriavidus_taiwanensis_LMG_19424 15 12

Cupriavidus_metallidurans_CH34 14 11

Cupriavidus_necator_N-1 18 14

Ralstonia_eutropha_H16 16 13

Ralstonia_pickettii_12D 14 10

Ralstonia_solanacearum_CFBP2957 14 10

Polynucleobacter_necessarius_subsp._asymbioticus_QLW-P1DMWA-1 12 9

Burkholderia_sp._RPE64 15 11

Burkholderia_sp._CCGE1002 17 14

Burkholderia_thailandensis_E264 16 13

Burkholderia_pseudomallei_1106a 16 13

Burkholderia_mallei_SAVP1 13 10

Burkholderia_ambifaria_AMMD 16 12

Burkholderia_cenocepacia_HI2424 16 12

Burkholderia_multivorans_ATCC_17616 14 11

Burkholderia_vietnamiensis_G4 16 12

Burkholderia_gladioli_BSR3 17 13

Burkholderia_glumae_BGR1 17 14

Verminephrobacter_eiseniae_EF01-2 13 9

Alicycliphilus_denitrificans_K601 16 12

Ramlibacter_tataouinensis_TTB310 15 11

Delftia_sp._Cs1-4 18 14

Delftia_acidovorans_SPH-1 18 14

Polaromonas_sp._JS666 20 14

Polaromonas_naphthalenivorans_CJ2 15 11

Variovorax_paradoxus_S110 14 10

Rhodoferax_ferrireducens_T118 16 12

Acidovorax_ebreus_TPSY 16 12

Acidovorax_sp._KKS102 15 11

Acidovorax_sp._JS42 16 12

Acidovorax_citrulli_AAC00-1 18 13

Acidovorax_avenae_subsp._avenae_ATCC_19860 20 15

Comamonas_testosteroni_CNB-2 16 12

Herminiimonas_arsenicoxydans 14 10

Collimonas_fungivorans_Ter331 14 11

Janthinobacterium_sp._Marseille 14 10

Herbaspirillum_seropedicae_SmR1 16 13

Pusillimonas_sp._T7-7 14 11

Advenella_kashmirensis_WT001 10 8

Taylorella_asinigenitalis_MCE3 14 10

Taylorella_equigenitalis_MCE9 14 10

Bordetella_petrii_DSM_12804 14 11

Bordetella_avium_197N 14 11

Bordetella_pertussis_Tohama_I 16 13

Bordetella_parapertussis_12822 17 13

Bordetella_bronchiseptica_RB50 17 13

Achromobacter_xylosoxidans_A8 17 13

Achromobacter_xylosoxidans 16 13

Thiobacillus_denitrificans_ATCC_25259 15 11

Nitrosospira_multiformis_ATCC_25196 14 10

Nitrosomonas_sp._Is79A3 10 7

Nitrosomonas_eutropha_C91 9 7

Nitrosomonas_europaea_ATCC_19718 9 7

Sideroxydans_lithotrophicus_ES-1 13 10

Gallionella_capsiferriformans_ES-2 12 9

Methylotenera_versatilis_301 12 9

Methylotenera_mobilis_JLW8 11 8

Methylovorus_sp._MP688 12 9

Methylovorus_glucosetrophus_SIP3-4 12 9

Methylobacillus_flagellatus_KT 15 12

Magnetococcus_marinus_MC-1 15 10

Parvularcula_bermudensis_HTCC2503 8 7

Asticcacaulis_excentricus_CB_48 11 9

Brevundimonas_subvibrioides_ATCC_15264 12 9

Caulobacter_sp._K31 15 12

Caulobacter_crescentus_NA1000 18 13

Caulobacter_segnis_ATCC_21756 15 11

Phenylobacterium_zucineum_HLK1 16 12

Erythrobacter_litoralis_HTCC2594 13 9

Sphingopyxis_alaskensis_RB2256 12 9

Novosphingobium_sp._PP1Y 15 12

Novosphingobium_aromaticivorans_DSM_12444 12 9

Sphingobium_sp._SYK-6 12 9

Sphingobium_japonicum_UT26S 14 11

Sphingobium_chlorophenolicum_L-1 13 10

Sphingomonas_sp._MM-1 11 8

Sphingomonas_wittichii_RW1 14 10

Zymomonas_mobilis_subsp._mobilis_NCIMB_11163 9 6

Maricaulis_maris_MCS10 13 9

Hirschia_baltica_ATCC_49814 11 8

Hyphomonas_neptunium_ATCC_15444 13 10

Dinoroseobacter_shibae_DFL_12 12 9

Phaeobacter_gallaeciensis_2.10 11 8

Pseudovibrio_sp._FO-BEG1 17 12

Jannaschia_sp._CCS1 11 8

Ruegeria_sp._TM1040 12 9

Ruegeria_pomeroyi_DSS-3 13 9

Ketogulonicigenium_vulgare_Y25 12 10

Ketogulonigenium_vulgarum_WSH-001 14 11

Roseobacter_litoralis_Och_149 13 9

Roseobacter_denitrificans_OCh_114 13 9

Rhodobacter_sphaeroides_ATCC_17029 14 11

Rhodobacter_capsulatus_SB_1003 13 10

Paracoccus_denitrificans_PD1222 14 11

Rhodospirillum_photometricum_DSM_122 16 12

Tistrella_mobilis_KA081020-065 15 11

Magnetospirillum_magneticum_AMB-1 13 9

Rhodospirillum_centenum_SW 15 11

Rhodospirillum_rubrum_F11 15 11

Azospirillum_lipoferum_4B 18 13

Azospirillum_sp._B510 21 16

Azospirillum_brasilense_Sp245 16 11

Gluconacetobacter_xylinus_NBRC_3288 11 8

Granulibacter_bethesdensis_CGDNIH1 8 5

Gluconacetobacter_diazotrophicus_PAl_5 12 9

Acidiphilium_multivorum_AIU301 12 9

Acidiphilium_cryptum_JF-5 12 9

Gluconobacter_oxydans_621H 11 8

Acetobacter_pasteurianus_IFO_3283-01 12 9

Polymorphum_gilvum_SL003B-26A1 18 13

Micavibrio_aeruginosavorus_ARL-13 6 5

Candidatus_Puniceispirillum_marinum_IMCC1322 11 8

alpha_proteobacterium_HIMB5 7 5

alpha_proteobacterium_HIMB59 9 6

Candidatus_Pelagibacter_sp._IMCC9063 8 6

Candidatus_Midichloria_mitochondrii_IricVA 4 3

Wolbachia_endosymbiont_of_Culex_quinquefasciatus_Pel 1 1

Wolbachia_sp._wRi 1 1

Ehrlichia_chaffeensis_str._Arkansas 2 1

Ehrlichia_canis_str._Jake 2 1

Ehrlichia_ruminantium_str._Gardel 2 1

Anaplasma_marginale_str._Florida 2 1

Anaplasma_centrale_str._Israel 2 1

Orientia_tsutsugamushi_str._Boryong 1 1

Rickettsia_bellii_OSU_85-389 1 1

Rickettsia_canadensis_str._McKiel 1 1

Rickettsia_typhi_str._Wilmington 1 1

Rickettsia_prowazekii_str._BuV67-CWPP 1 1

Rickettsia_philipii_str._364D 1 1

Rickettsia_heilongjiangensis_054 1 1

Rickettsia_peacockii_str._Rustic 1 1

Rickettsia_felis_URRWXCal2 1 1

Rickettsia_slovaca_13-B 1 1

Rickettsia_parkeri_str._Portsmouth 1 1

Rickettsia_massiliae_MTU5 1 1

Rickettsia_japonica_YH 1 1

Rickettsia_africae_ESF-5 1 1

Rickettsia_rhipicephali_str._3-7-female6-CWPP 1 1

Rickettsia_montanensis_str._OSU_85-930 1 1

Candidatus_Rickettsia_amblyommii_str._GAT-30V 1 1

Rickettsia_australis_str._Cutlack 1 1

Rickettsia_akari_str._Hartford 1 1

Rickettsia_rickettsii_str._'Sheila_Smith' 1 1

Rickettsia_conorii_str._Malish_7 1 1

Starkeya_novella_DSM_506 12 9

Xanthobacter_autotrophicus_Py2 14 11

Azorhizobium_caulinodans_ORS_571 15 12

Methylobacterium_chloromethanicum_CM4 13 10

Methylobacterium_extorquens_AM1 12 9

Methylobacterium_sp._4-46 14 11

Methylobacterium_populi_BJ001 13 10

Methylobacterium_nodulans_ORS_2060 13 10

Methylobacterium_radiotolerans_JCM_2831 15 12

Parvibaculum_lavamentivorans_DS-1 10 7

Ochrobactrum_anthropi_ATCC_49188 15 12

Brucella_microti_CCM_4915 15 12

Brucella_pinnipedialis_B2/94 14 11

Brucella_canis_ATCC_23365 15 12

Brucella_suis_ATCC_23445 15 12

Brucella_melitensis_ATCC_23457 15 12

Brucella_ovis_ATCC_25840 13 10

Brucella_abortus_S19 15 12

Sinorhizobium_fredii_NGR234 18 14

Sinorhizobium_medicae_WSM419 18 14

Sinorhizobium_meliloti_AK83 18 13

Genome_sequence_of_Rhizobium_sp._strain_IRBG74 17 13

Rhizobium_etli_CIAT_652 15 12

Rhizobium_leguminosarum_bv._viciae_3841 14 11

Agrobacterium_tumefaciens_str._C58 17 13

Agrobacterium_radiobacter_K84 20 16

Agrobacterium_sp._H13-3 17 13

Agrobacterium_vitis_S4 15 12

Candidatus_Liberibacter_asiaticus_str._psy62 3 2

Mesorhizobium_sp._BNC1 12 9

Mesorhizobium_opportunistum_WSM2075 16 11

Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 18 13

Mesorhizobium_loti_MAFF303099 16 11

Methylocella_silvestris_BL2 12 9

Beijerinckia_indica_subsp._indica_ATCC_9039 11 8

Pelagibacterium_halotolerans_B2 14 10

Rhodomicrobium_vannielii_ATCC_17100 12 10

Hyphomicrobium_sp._MC1 11 8

Hyphomicrobium_denitrificans_ATCC_51888 9 6

Oligotropha_carboxidovorans_OM4 11 8

Rhodopseudomonas_palustris_BisA53 13 10

Nitrobacter_winogradskyi_Nb-255 11 8

Nitrobacter_hamburgensis_X14 10 7

Bradyrhizobium_japonicum_USDA_110 16 12

Bradyrhizobium_sp._ORS_278 17 13

Methylocystis_sp._SC2 11 8

Bartonella_tribocorum_CIP_105476 7 6

Bartonella_clarridgeiae_73 4 3

Bartonella_henselae_str._Houston-1 7 6

Bartonella_grahamii_as4aup 7 6

Bartonella_quintana_str._Toulouse 3 2

Bartonella_bacilliformis_KC583 4 3

Saccharophagus_degradans_2-40 20 14

Teredinibacter_turnerae_T7901 19 14

Cellvibrio_japonicus_Ueda107 17 13

Aggregatibacter_aphrophilus_NJ8700 13 10

Aggregatibacter_actinomycetemcomitans_D7S-1 10 8

Haemophilus_somnus_129PT 12 10

Gallibacterium_anatis_UMN179 19 14

Pasteurella_multocida_subsp._multocida_str._3480 17 12

Haemophilus_parasuis_SH0165 16 12

Haemophilus_ducreyi_35000HP 6 5

Haemophilus_parainfluenzae_T3T1 16 12

Haemophilus_influenzae_PittEE 14 10

Actinobacillus_succinogenes_130Z 17 12

Actinobacillus_pleuropneumoniae_serovar_5b_str._L20 17 12

Oceanimonas_sp._GK1 24 18

Tolumonas_auensis_DSM_9187 17 13

Aeromonas_veronii_B565 23 16

Aeromonas_salmonicida_subsp._salmonicida_A449 23 16

Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 22 15

Aliivibrio_salmonicida_LFI1238 20 14

Vibrio_fischeri_MJ11 25 18

Vibrio_sp._Ex25 22 16

Vibrio_harveyi_ATCC_BAA-1116 22 16

Vibrio_parahaemolyticus_RIMD_2210633 22 16

Vibrio_splendidus_LGP32 23 17

Vibrio_anguillarum_775 24 17

Vibrio_furnissii_NCTC_11218 26 19

Vibrio_vulnificus_MO6-24/O 23 16

Vibrio_cholerae_O395 25 18

Photobacterium_profundum_SS9 24 17

Psychromonas_ingrahamii_37 17 13

Psychromonas_sp._CNPT3 13 11

Idiomarina_loihiensis_L2TR 9 7

Ferrimonas_balearica_DSM_9799 24 16

Shewanella_piezotolerans_WP3 24 17

Shewanella_loihica_PV-4 23 16

Shewanella_halifaxensis_HAW-EB4 26 18

Shewanella_sediminis_HAW-EB3 25 18

Shewanella_denitrificans_OS217 25 16

Shewanella_pealeana_ATCC_700345 25 17

Shewanella_oneidensis_MR-1 24 16

Shewanella_baltica_OS185 24 16

Shewanella_woodyi_ATCC_51908 25 17

Shewanella_sp._MR-4 24 16

Shewanella_amazonensis_SB2B 26 17

Shewanella_violacea_DSS12 24 16

Shewanella_frigidimarina_NCIMB_400 25 16

Shewanella_putrefaciens_CN-32 24 16

Colwellia_psychrerythraea_34H 25 18

Pseudoalteromonas_sp._SM9913 23 16

Pseudoalteromonas_atlantica_T6c 24 15

Pseudoalteromonas_haloplanktis_TAC125 23 16

Glaciecola_sp._4H-3-7+YE-5 24 15

Glaciecola_nitratireducens_FR1064 21 13

Marinobacter_adhaerens_HP15 21 14

Marinobacter_sp._BSs20148 21 15

Marinobacter_hydrocarbonoclasticus_ATCC_49840 20 14

Marinobacter_aquaeolei_VT8 20 14

Alteromonas_sp._SN2 25 16

Alteromonas_macleodii_str._'Deep_ecotype' 20 13

Kangiella_koreensis_DSM_16069 12 9

Hahella_chejuensis_KCTC_2396 18 14

Alcanivorax_borkumensis_SK2 17 12

Marinomonas_posidonica_IVIA-Po-181 18 15

Marinomonas_sp._MWYL1 16 13

Marinomonas_mediterranea_MMB-1 18 15

Candidatus_Carsonella_ruddii_PV 2 1

Chromohalobacter_salexigens_DSM_3043 16 13

Halomonas_elongata_DSM_2581 16 13

Methylomicrobium_alcaliphilum 15 11

Methylomonas_methanica_MC09 15 11

Methylococcus_capsulatus_str._Bath 12 9

Dichelobacter_nodosus_VCS1703A 4 3

Rhodanobacter_denitrificans 15 11

Frateuria_aurantia_DSM_6220 16 12

Pseudoxanthomonas_spadix_BD-a59 18 13

Pseudoxanthomonas_suwonensis_11-1 16 12

Stenotrophomonas_maltophilia_K279a 15 12

Xylella_fastidiosa_M23 14 11

Xanthomonas_axonopodis_pv._citri_str._306 16 12

Xanthomonas_albilineans_GPE_PC73 13 10

Xanthomonas_oryzae_pv._oryzae_PXO99A 17 13

Xanthomonas_campestris_pv._campestris_str._B100 16 12

Halothiobacillus_neapolitanus_c2 14 11

Spiribacter_sp._UAH-SP71 15 12

Alkalilimnicola_ehrlichii_MLHE-1 17 13

Thioalkalivibrio_sulfidophilus_HL-EbGr7 17 12

Thioalkalivibrio_sp._K90mix 18 12

Halorhodospira_halophila_SL1 16 11

Allochromatium_vinosum_DSM_180 21 14

Thiocystis_violascens_DSM_198 21 14

Nitrosococcus_watsonii_C-113 15 12

Nitrosococcus_halophilus_Nc4 14 11

Nitrosococcus_oceani_ATCC_19707 16 12

Coxiella_burnetii_Dugway_5J108-111 6 5

Legionella_longbeachae_NSW150 8 7

Legionella_pneumophila_str._Corby 6 5

gamma_proteobacterium_HdN1 17 12

Candidatus_Ruthia_magnifica_str._Cm_(Calyptogena_magnifica) 10 7

Candidatus_Vesicomyosocius_okutanii_HA 10 7

Photorhabdus_asymbiotica 19 14

Photorhabdus_luminescens_subsp._laumondii_TTO1 19 14

Xenorhabdus_bovienii_SS-2004 18 13

Xenorhabdus_nematophila_ATCC_19061 19 13

Providencia_stuartii_MRSN_2154 23 17

Proteus_mirabilis_HI4320 18 13

Edwardsiella_ictaluri_93-146 21 15

Edwardsiella_tarda_EIB202 21 15

Rahnella_sp._Y9602 22 15

Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 20 14

Yersinia_pseudotuberculosis_IP_31758 21 15

Yersinia_pestis_Pestoides_F 21 15

Yersinia_enterocolitica_subsp._enterocolitica_8081 22 16

Serratia_sp._AS12 24 18

Serratia_sp._ATCC_39006 23 16

Serratia_plymuthica_AS9 24 18

Serratia_proteamaculans_568 21 15

Dickeya_dadantii_Ech703 22 16

Dickeya_zeae_Ech1591 23 17

Pectobacterium_wasabiae_WPP163 25 18

Pectobacterium_sp._SCC3193 23 17

Pectobacterium_atrosepticum_SCRI1043 23 17

Pectobacterium_carotovorum_subsp._carotovorum_PC1 23 17

Sodalis_glossinidius_str._'morsitans' 17 12

Halyomorpha_halys_symbiont 11 7

Pantoea_sp._At-9b 26 18

Pantoea_vagans_C9-1 23 17

Pantoea_ananatis_LMG_20103 20 14

Wigglesworthia_glossinidia_endosymbiont_of_Glossina_brevipalpis 1 1

Buchnera_aphidicola_BCc 3 2

Erwinia_tasmaniensis_Et1/99 20 14

Erwinia_sp._Ejp617 21 15

Erwinia_billingiae_Eb661 23 17

Erwinia_pyrifoliae_Ep1/96 21 15

Erwinia_amylovora_ATCC_49946 20 14

Escherichia_blattae_DSM_4481 25 17

Cronobacter_turicensis_z3032 21 15

Cronobacter_sakazakii_ES15 20 14

secondary_endosymbiont_of_Ctenarytaina_eucalypti 2 1

Candidatus_Hamiltonella_defensa_5AT_(Acyrthosiphon_pisum) 7 6

Candidatus_Blochmannia_floridanus 4 3

Enterobacteriaceae_bacterium_strain_FGI_57 28 21

Shigella_sonnei_Ss046 22 16

Shigella_flexneri_5_str._8401 22 16

Shigella_dysenteriae_Sd197 22 16

Shigella_boydii_CDC_3083-94 22 16

Salmonella_bongori_NCTC_12419 22 16

Salmonella_enterica_subsp._enterica_serovar_Paratyphi_C_strain_RKS4594 23 17

Klebsiella_oxytoca_E718 23 17

Klebsiella_variicola_At-22 26 19

Klebsiella_pneumoniae_NTUH-K2044 23 17

Enterobacter_aerogenes_KCTC_2190 22 16

Escherichia_fergusonii_ATCC_35469 23 17

Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 22 16

Enterobacter_sp._R4-368 27 20

Enterobacter_sp._638 24 18

Enterobacter_asburiae_LF7a 21 15

Enterobacter_cloacae_subsp._dissolvens_SDM 21 15

Citrobacter_rodentium_ICC168 22 16

Citrobacter_koseri_ATCC_BAA-895 23 18

Azotobacter_vinelandii_DJ 20 15

Pseudomonas_sp._TKP 26 20

Pseudomonas_sp._UW4 25 18

Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 26 20

Pseudomonas_entomophila_L48 27 19

Pseudomonas_syringae_pv._tomato_str._DC3000 26 19

Pseudomonas_stutzeri_A1501 20 16

Pseudomonas_fulva_12-X 23 17

Pseudomonas_putida_F1 25 18

Pseudomonas_protegens_Pf-5 25 19

Pseudomonas_fluorescens_SBW25 26 20

Pseudomonas_mendocina_ymp 27 20

Pseudomonas_aeruginosa_UCBPP-PA14 24 18

Pseudomonas_sp._VLB120 27 20

Psychrobacter_sp._G 11 9

Psychrobacter_sp._PRwf-1 11 9

Psychrobacter_arcticus_273-4 10 8

Psychrobacter_cryohalolentis_K5 11 9

Moraxella_catarrhalis_RH4 12 9

Acinetobacter_oleivorans_DR1 16 13

Acinetobacter_calcoaceticus_PHEA-2 14 12

Acinetobacter_baumannii_ATCC_17978 13 11

Acinetobacter_sp._ADP1 16 13

Methylophaga_sp._JAM1 15 10

Cycloclasticus_sp._P1 12 9

Thiomicrospira_crunogena_XCL-2 16 13

Thioalkalimicrobium_cyclicum_ALM1 13 10

Francisella_noatunensis_subsp._orientalis_str._Toba_04 8 6

Francisella_sp._TX077308 10 8

Francisella_philomiragia_subsp._philomiragia_ATCC_25017 10 8

Francisella_tularensis_subsp._tularensis_WY96-3418 7 6

Francisella_cf._novicida_3523 10 8

Francisella_novicida_U112 10 8

Nanoarchaeum_equitans_Kin4-M 1 1

Candidatus_Caldiarchaeum_subterraneum 5 4

Cenarchaeum_symbiosum_A 8 6

Candidatus_Nitrosopumilus_sp._AR2 7 5

Nitrosopumilus_maritimus_SCM1 8 6

Candidatus_Korarchaeum_cryptofilum_OPF8 10 9

Acidilobus_saccharovorans_345-15 3 3

Fervidicoccus_fontis_Kam940 4 4

Pyrolobus_fumarii_1A 6 6

Hyperthermus_butylicus_DSM_5456 8 8

Thermogladius_cellulolyticus_1633 6 6

Ignisphaera_aggregans_DSM_17230 6 6

Aeropyrum_pernix_K1 6 6

Ignicoccus_hospitalis_KIN4/I 4 4

Thermosphaera_aggregans_DSM_11486 3 3

Staphylothermus_hellenicus_DSM_12710 4 4

Staphylothermus_marinus_F1 5 5

Desulfurococcus_fermentans_DSM_16532 3 3

Desulfurococcus_kamchatkensis_1221n 4 4

Desulfurococcus_mucosus_DSM_2162 3 3

Metallosphaera_cuprina_Ar-4 6 6

Metallosphaera_sedula_DSM_5348 6 6

Acidianus_hospitalis_W1 6 6

Sulfolobus_tokodaii_str._7 4 4

Sulfolobus_islandicus_Y.N.15.51 3 3

Sulfolobus_solfataricus_P2 4 4

Sulfolobus_acidocaldarius_DSM_639 3 3

Thermofilum_sp._1910b 5 5

Thermofilum_pendens_Hrk_5 4 4

Vulcanisaeta_moutnovskia_768-28 4 4

Vulcanisaeta_distributa_DSM_14429 6 6

Caldivirga_maquilingensis_IC-167 6 6

Pyrobaculum_sp._1860 6 6

Pyrobaculum_calidifontis_JCM_11548 6 6

Pyrobaculum_arsenaticum_DSM_13514 6 6

Pyrobaculum_oguniense_TE7 6 6

Thermoproteus_neutrophilus_V24Sta 7 7

Pyrobaculum_aerophilum_str._IM2 6 6

Pyrobaculum_islandicum_DSM_4184 7 7

Thermoproteus_uzoniensis_768-20 6 6

Thermoproteus_tenax_Kra_1 6 6

halophilic_archaeon_DL31 9 7

Methanocella_arvoryzae_MRE50 15 11

Methanocella_conradii_HZ254 17 13

Methanocella_paludicola_SANAE 17 13

Methanosaeta_harundinacea_6Ac 12 8

Methanosaeta_thermophila_PT 12 8

Methanosaeta_concilii_GP6 15 11

Methanosalsum_zhilinae_DSM_4017 11 8

Methanohalobium_evestigatum_Z-7303 10 7

Methanococcoides_burtonii_DSM_6242 11 8

Methanosarcina_acetivorans_C2A 18 14

Methanosarcina_mazei_Go1 17 13

Methanosarcina_barkeri_str._Fusaro 15 12

Methanohalophilus_mahii_DSM_5219 13 10

Methanosphaerula_palustris_E1-9c 11 8

Methanoregula_boonei_6A8 10 7

Methanospirillum_hungatei_JF-1 14 11

Methanocorpusculum_labreanum_Z 12 9

Methanoplanus_petrolearius_DSM_11571 11 8

Methanoculleus_bourgensis_MS2 14 10

Methanoculleus_marisnigri_JR1 13 10

Methanopyrus_kandleri_AV19 12 10

Ferroglobus_placidus_DSM_10642 13 10

Archaeoglobus_profundus_DSM_5631 18 14

Archaeoglobus_veneficus_SNP6 16 12

Archaeoglobus_fulgidus_DSM_4304 15 12

Thermococcus_sp._4557 4 4

Thermococcus_onnurineus_NA1 4 4

Thermococcus_kodakarensis_KOD1 3 3

Thermococcus_gammatolerans_EJ3 2 2

Thermococcus_sibiricus_MM_739 3 3

Thermococcus_barophilus_MP 3 3

Pyrococcus_sp._ST04 5 5

Pyrococcus_yayanosii_CH1 3 3

Pyrococcus_horikoshii_OT3 3 3

Pyrococcus_abyssi_GE5 3 3

Pyrococcus_furiosus_COM1 5 5

Thermoplasmatales_archaeon_BRNA1 13 11

Thermoplasma_volcanium_GSS1 4 4

Thermoplasma_acidophilum_DSM_1728 4 4

Picrophilus_torridus_DSM_9790 3 3

Salinarchaeum_sp._Harcht-Bsk1 12 10

Halopiger_xanaduensis_SH-6 13 11

Haloterrigena_turkmenica_DSM_5511 18 16

Natrinema_sp._J7-2 13 11

Natrialba_magadii_ATCC_43099 14 12

Halorubrum_lacusprofundi_ATCC_49239 13 11

Haloquadratum_walsbyi_DSM_16790 12 10

Halogeometricum_borinquense_DSM_11551 12 10

Haloferax_mediterranei_ATCC_33500 12 10

Haloferax_volcanii_DS2 15 13

Halomicrobium_mukohataei_DSM_12286 12 10

Halorhabdus_utahensis_DSM_12940 13 11

Natronomonas_pharaonis_DSM_2160 12 10

Haloarcula_hispanica_ATCC_33960 14 12

Haloarcula_marismortui_ATCC_43049 13 11

Halalkalicoccus_jeotgali_B3 12 10

Halobacterium_salinarum_R1 7 6

Halobacterium_sp._NRC-1 7 6

Methanotorris_igneus_Kol_5 15 13

Methanocaldococcus_sp._FS406-22 14 12

Methanocaldococcus_fervens_AG86 14 12

Methanocaldococcus_vulcanius_M7 14 12

methanocaldococcus_infernus_ME 12 10

Methanocaldococcus_jannaschii_DSM_2661 14 12

Methanothermococcus_okinawensis_IH1 14 12

Methanococcus_aeolicus_Nankai-3 13 11

Methanococcus_maripaludis_C5 14 11

Methanococcus_voltae_A3 13 10

Methanococcus_vannielii_SB 15 12

Methanothermus_fervidus_DSM_2088 13 10

Methanothermobacter_marburgensis_str._Marburg 18 14

Methanothermobacter_thermautotrophicus_str._Delta_H 17 13

Methanosphaera_stadtmanae_DSM_3091 17 12

Methanobrevibacter_sp._AbM4 14 10

Methanobrevibacter_ruminantium_M1 13 9

Methanobrevibacter_smithii_ATCC_35061 14 10

Complete_genome_sequence_of_Methanobacterium_sp._Mb1 21 17

Aciduliprofundum_sp._MAR08-339 2 2

Aciduliprofundum_boonei_T469 2 2

Acholeplasma_laidlawii_PG-8A 3 2

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Longest transcript per gene
Genome Number Proteins

Homo_sapiens_69_37 (Human) 13 9

Pan_troglodytes_69_2.1.4 (Chimpanzee) 9 7

Gorilla_gorilla_69_3.1 (Western gorilla) 11 8

Pongo_abelii_69_2 (Sumatran orangutan)

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Domain combinations for ACT-like superfamily in groups of genomes