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Domain combinations for SH2 domain superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a SH2 domain domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   413 378
Pan_troglodytes_76_2.1.4   (Chimpanzee)   117 107
Gorilla_gorilla_76_3.1   (Western gorilla)   174 158
Pongo_abelii_76_2   (Sumatran orangutan)   128 116
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   126 118
Papio_anubis_76   (Olive baboon)   136 125
Macaca_mulatta_76_1   (Rhesus monkey)   190 167
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   290 258
Otolemur_garnettii_76_3   (Small-eared galago)   125 114
Microcebus_murinus_76_1   (Gray mouse lemur)   95 88
Rattus_norvegicus_76_5.0   (Norway rat)   141 128
Mus_musculus_76_38   (House mouse)   281 262
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   109 100
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   120 110
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   130 119
Cavia_porcellus_76_3   (Domestic guinea pig)   119 109
Oryctolagus_cuniculus_76_2   (Rabbit)   119 108
Ochotona_princeps_76   (American pika)   98 89
Tupaia_belangeri_76   (Northern tree shrew)   84 78
Sus_scrofa_76_10.2   (Pig)   180 161
Bos_taurus_76_3.1   (Cattle)   135 123
Ovis_aries_76_3.1   (Sheep)   136 124
Vicugna_pacos_76_1   (Alpaca)   62 57
Tursiops_truncatus_76_1   (Bottlenose dolphin)   113 105
Mustela_putorius_furo_76_1.0   (Domestic ferret)   122 112
Ailuropoda_melanoleuca_76_1   (Giant panda)   136 122
Canis_familiaris_76_3.1   (Dog)   146 135
Felis_catus_76_6.2   (Domestic cat)   126 115
Equus_caballus_76_2   (Horse)   131 122
Myotis_lucifugus_76_2.0   (Little brown bat)   119 109
Pteropus_vampyrus_76_1   (Large flying fox)   117 106
Sorex_araneus_76_1   (European shrew)   76 69
Erinaceus_europaeus_76   (Western European hedgehog)   82 74
Procavia_capensis_76_1   (Cape rock hyrax)   99 90
Loxodonta_africana_76_3   (African savanna elephant)   157 144
Echinops_telfairi_76   (Small Madagascar hedgehog)   89 87
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   152 142
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   58 54
Macropus_eugenii_76_1.0   (Tammar wallaby)   103 94
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   128 116
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   124 114
Ornithorhynchus_anatinus_76_5   (Platypus)   93 85
Saccoglossus_kowalevskii_v3.0 87 82
Petromyzon_marinus_76_7.0   (Sea lamprey)   49 46
Meleagris_gallopavo_76_2   (Turkey)   121 108
Gallus_gallus_76_4   (Chicken)   116 102
Anas_platyrhynchos_76_1.0   (Mallard)   102 90
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   105 94
Ficedula_albicollis_76_1.0   (Collared flycatcher)   102 92
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   130 115
Anolis_carolinensis_76_2.0   (Green anole)   107 97
Xenopus_laevis_   (African clawed frog)   221 182
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   133 117
Latimeria_chalumnae_76_1   (Coelacanth)   149 135
Lepisosteus_oculatus_76   (Spotted gar)   162 146
Gadus_morhua_76_1   (Atlantic cod)   145 129
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   186 169
Takifugu_rubripes_76_4   (Torafugu)   406 344
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   175 157
Oryzias_latipes_76_1   (Japanese medaka)   151 133
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   150 135
Poecilia_formosa_76   (Amazon molly)   155 139
Oreochromis_niloticus_76_1.0   (Nile tilapia)   196 175
Astyanax_mexicanus_76   (Mexican tetra)   150 140
Danio_rerio_76_9   (Zebrafish)   264 239
Oikopleura_dioica 33 30
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   107 94
Ciona_intestinalis_76   (Vase tunicate)   64 57
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   61 55
Adineta_vaga 99 86
Octopus_bimaculoides_280 60 56
Crassostrea_gigas_22   (Pacific oyster)   62 53
Lottia_gigantea_   (Owl limpet)   33 30
Helobdella_robusta_ 73 69
Capitella_sp._I_ 47 42
Danaus_plexippus_OGS1.0   (Monarch butterfly)   41 35
Heliconius_melpomene_   (Postman butterfly)   30 24
Bombyx_mori_   (Domestic silkworm)   35 31
Nasonia_vitripennis_   (Jewel wasp)   29 25
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   86 76
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   34 31
Linepithema_humile_v1.1   (Argentine ant)   36 31
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   34 30
Solenopsis_invicta_v.2.2.3   (Red fire ant)   27 23
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   35 31
Atta_cephalotes_v1.1 35 31
Camponotus_floridanus_v3.3   (Florida carpenter ant)   35 31
Lucilia_cuprina   (Australian sheep blowfly)   31 26
Drosophila_grimshawi_1.3 41 37
Drosophila_willistoni_1.3 38 34
Drosophila_pseudoobscura_2.13 36 33
Drosophila_persimilis_1.3 36 33
Drosophila_suzukii 38 31
Drosophila_yakuba_1.3 39 34
Drosophila_simulans_1.3 32 29
Drosophila_sechellia_1.3 39 34
Drosophila_melanogaster_76_5   (Fruit fly)   130 119
Drosophila_erecta_1.3 39 34
Drosophila_ananassae_1.3 40 35
Drosophila_virilis_1.2 40 35
Drosophila_mojavensis_1.3 40 34
Megaselia_scalaris_22 13 12
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   45 40
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   38 32
Anopheles_darlingi_22   (American malaria mosquito)   30 25
Anopheles_gambiae_49_3j   (African malaria mosquito)   45 38
Tribolium_castaneum_3.0   (Red flour beetle)   41 35
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   39 33
Acyrthosiphon_pisum_   (Pea aphid)   45 37
Rhodnius_prolixus_22 37 32
Daphnia_pulex_   (Common water flea)   22 19
Strigamia_maritima_22 40 36
Sarcoptes_scabiei 26 21
Tetranychus_urticae_   (Two-spotted spider mite)   35 29
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   38 32
Pristionchus_pacificus_ 63 61
Meloidogyne_incognita_   (Southern root-knot nematode)   31 28
Meloidogyne_hapla_ 25 23
Onchocerca_volvulus_22 43 39
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   67 59
Caenorhabditis_japonica_ 66 62
Caenorhabditis_brenneri_ 93 87
Caenorhabditis_remanei_ 79 75
Caenorhabditis_elegans_76_235   (Roundworm)   101 96
Caenorhabditis_briggsae_2 69 65
Trichinella_spiralis_22 32 28
Hymenolepis_microstoma_ 48 43
Echinococcus_multilocularis_ 52 46
Echinococcus_granulosus_ 50 44
Taenia_solium_   (Pork tapeworm)   49 43
Schistosoma_mansoni_ 43 38
Mnemiopsis_leidyi   (Sea walnut)   41 38
Thelohanellus_kitauei 12 12
Acropora_digitifera_v1.0 54 47
Nematostella_vectensis_1.0   (Starlet sea anemone)   30 29
Hydra_vulgaris 47 40
Amphimedon_queenslandica 111 97
Trichoplax_adhaerens_ 28 27
Proterospongia_sp._ATCC_50818_ 182 140
Monosiga_brevicollis_ 152 108
Sphaeroforma_arctica_JP610_ 20 19
Capsaspora_owczarzaki_ATCC_30864_ 38 34
Conidiobolus_coronatus_NRRL28638_v1.0 1 1
Mortierella_verticillata_NRRL_6337_ 1 1
Phycomyces_blakesleeanus_ 1 1
Rhizopus_oryzae_RA_99-880_ 1 1
Mucor_circinelloides_ 1 1
Rhizomucor_miehei_CAU432_ 1 1
Malassezia_globosa_CBS_7966_ 2 2
Sporisorium_reilianum_22 1 1
Ustilago_maydis_ 1 1
Mixia_osmundae_IAM_14324_v1.0 1 1
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 1 1
Melampsora_laricis-populina_ 1 1
Rhodotorula_graminis_WP1_v1.0 1 1
Sporobolomyces_roseus_IAM_13481_ 1 1
Microbotryum_violaceum_22 1 1
Wallemia_sebi_v1.0 1 1
Sphaerobolus_stellatus_v1.0 1 1
Piloderma_croceum_F_1598_v1.0 1 1
Serpula_lacrymans_var._lacrymans_S7.9_ 1 1
Coniophora_puteana 1 1
Hydnomerulius_pinastri_v2.0 1 1
Paxillus_rubicundulus_Ve08.2h10_v1.0 1 1
Pisolithus_microcarpus_441_v1.0 1 1
Pisolithus_tinctorius_Marx_270_v1.0 1 1
Scleroderma_citrinum_Foug_A_v1.0 1 1
Coprinopsis_cinerea_okayama7_130_v3 2 2
Pleurotus_ostreatus_   (Oyster mushroom)   1 1
Amanita_thiersii_Skay4041_v1.0 1 1
Amanita_muscaria_Koide_v1.0   (Fly agaric)   1 1
Galerina_marginata_v1.0 1 1
Hebeloma_cylindrosporum_h7_v2.0 1 1
Laccaria_bicolor_S238N-H82_ 1 1
Agaricus_bisporus_var._bisporus_ 1 1
Schizophyllum_commune_ 1 1
Stereum_hirsutum_FP-91666_SS1__v1.0 1 1
Heterobasidion_annosum_ 1 1
Gloeophyllum_trabeumv1.0 1 1
Punctularia_strigosozonata_v1.0 1 1
Sebacina_vermifera_MAFF_305830_v1.0 1 1
Fomitiporia_mediterranea_v1.0 1 1
Tulasnella_calospora_AL13/4D_v1.0 1 1
Postia_placenta_ 1 1
Wolfiporia_cocos_MD-104_SS10__v1.0 1 1
Fomitopsis_pinicolav1.0 1 1
Fomitopsis_pinicola_FP-58527_SS1_v3.0 1 1
Phanerochaete_chrysosporium_RP-78_2.1 1 1
Dichomitus_squalens 1 1
Trametes_versicolor_v1.0 1 1
Tremella_mesenterica_   (Witches' butter)   1 1
Daldinia_eschscholzii_EC12_v1.0 1 1
Apiospora_montagnei_NRRL_25634_v1.0 1 1
Magnaporthe_poae_ATCC_64411_22 1 1
Magnaporthe_grisea_70-15_ 1 1
Podospora_anserina_ 1 1
Sporotrichum_thermophile_ATCC_42464_ 1 1
Thielavia_terrestris_NRRL_8126_ 1 1
Chaetomium_globosum_CBS_148.51_ 1 1
Neurospora_tetrasperma_ 1 1
Neurospora_discreta_FGSC_8579_ 1 1
Neurospora_crassa_OR74A_ 1 1
Cryphonectria_parasitica_   (Chestnut blight fungus)   1 1
Verticillium_albo-atrum_VaMs.102_ 1 1
Verticillium_dahliae_VdLs.17_ 1 1
Acremonium_alcalophilumv_1.0 1 1
Glomerella_graminicola_22 1 1
Fusarium_graminearum_ 1 1
Nectria_haematococca_mpVI_ 1 1
Fusarium_oxysporum_f._sp._lycopersici_4286_ 1 1
Fusarium_verticillioides_7600_ 1 1
Trichoderma_asperellum_CBS_433.97_v1.0 1 1
Trichoderma_atroviride_ 1 1
Trichoderma_citrinoviride_v1.0 1 1
Trichoderma_reesei_1.2 1 1
Trichoderma_virens_Gv29-8_ 1 1
Trichoderma_longibrachiatum_ATCC_18648_v1.0 1 1
Trichoderma_harzianum_CBS_226.95_v1.0 1 1
Amorphotheca_resinae_v1.0   (Creosote fungus)   1 1
Botrytis_cinerea_B05.10_ 1 1
Sclerotinia_sclerotiorum_ 1 1
Blumeria_graminis_22 1 1
Didymella_exigua_CBS_183.55_v1.0 1 1
Leptosphaeria_maculans_22 1 1
Setosphaeria_turcica_v1.0 1 1
Cochliobolus_miyabeanus_ATCC_44560_v1.0 1 1
Cochliobolus_victoriae_FI3_v1.0 1 1
Cochliobolus_carbonum_26-R-13_v1.0 1 1
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   1 1
Alternaria_brassicicola_ 1 1
Cochliobolus_lunatus_m118_v2.0 1 1
Pyrenophora_teres_f._teres_22 1 1
Pyrenophora_tritici-repentis_ 1 1
Stagonospora_nodorum_ 1 1
Mycosphaerella_graminicola_IPO323_ 1 1
Zasmidium_cellare_ATCC_36951_v1.0 1 1
Dothistroma_septosporum 1 1
Septoria_musiva_v1.0 1 1
Mycosphaerella_fijiensis_CIRAD86_ 1 1
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 1 1
Paracoccidioides_brasiliensis_Pb18_ 1 1
Coccidioides_posadasii_RMSCC_3488_ 1 1
Coccidioides_immitis_RS_ 1 1
Ajellomyces_dermatitidis_SLH14081_ 1 1
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 1 1
Microsporum_canis_CBS_113480_ 1 1
Trichophyton_equinum_CBS_127.97_ 1 1
Trichophyton_verrucosum_HKI_0517_ 1 1
Arthroderma_benhamiae_CBS_112371_ 1 1
Trichophyton_tonsurans_CBS_112818_ 1 1
Trichophyton_rubrum_CBS_118892_ 1 1
Uncinocarpus_reesii_1704_ 1 1
Aspergillus_zonatus_v1.0 1 1
Penicillium_chrysogenum_Wisconsin_54-1255_ 1 1
Penicillium_chrysogenum_v1.0 1 1
Aspergillus_acidus_v1.0 1 1
Aspergillus_fumigatus_Af293 1 1
Aspergillus_brasiliensis_v1.0 1 1
Aspergillus_nidulans_FGSC_A4_ 1 1
Aspergillus_sydowii_v1.0 1 1
Aspergillus_versicolor_v1.0 1 1
Aspergillus_glaucus 1 1
Aspergillus_carbonarius_ITEM_5010_ 1 1
Neosartorya_fischeri_NRRL_181_ 1 1
Aspergillus_terreus_NIH2624_ 1 1
Aspergillus_tubingensis_v1.0 1 1
Aspergillus_wentii_v1.0 1 1
Aspergillus_oryzae_RIB40_ 1 1
Aspergillus_niger_22 1 1
Aspergillus_flavus_NRRL3357_ 1 1
Aspergillus_clavatus_NRRL_1_ 1 1
Penicillium_marneffei_ATCC_18224_ 1 1
Tuber_melanosporum_Mel28_22 1 1
Tuber_melanosporum_Vittad_   (Perigord truffle)   1 1
Hansenula_polymorpha_v2.0 1 1
Dekkera_bruxellensis_CBS_2499_v2.0 1 1
Pichia_membranifaciensv1.0 1 1
Candida_tanzawaensis_NRRL_Y-17324__v1.0 1 1
Candida_dubliniensis_CD36_ 1 1
Candida_tropicalis_MYA-3404_ 1 1
Candida_parapsilosis_ 1 1
Candida_albicans_SC5314 1 1
Lodderomyces_elongisporus_NRRL_YB-4239_ 1 1
Babjeviella_inositovora_NRRL_Y-12698_v1.0 1 1
Pichia_stipitis_CBS_6054_ 1 1
Candida_guilliermondii_ATCC_6260_ 1 1
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 1 1
Debaromyces_hansenii 1 1
Wickerhamomyces_anomalus 1 1
Pichia_pastoris_GS115_ 1 1
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 1 1
Yarrowia_lipolytica_CLIB122 1 1
Candida_lusitaniae_ATCC_42720_ 1 1
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 1 1
Vanderwaltozyma_polyspora_DSM_70294_ 1 1
Candida_glabrata_CBS138 1 1
Kluyveromyces_thermotolerans_CBS_6340 1 1
Lachancea_kluyveri_ 1 1
Kluyveromyces_waltii 1 1
Ashbya_gossypii_ATCC_10895_ 1 1
Zygosaccharomyces_rouxii_ 1 1
Saccharomyces_mikatae_MIT 1 1
Saccharomyces_paradoxus_MIT 1 1
Saccharomyces_cerevisiae_76   (Baker's yeast)   1 1
Saccharomyces_bayanus_MIT 1 1
Kluyveromyces_lactis 1 1
Schizosaccharomyces_cryophilus_OY26_22 1 1
Schizosaccharomyces_octosporus_yFS286_ 1 1
Schizosaccharomyces_japonicus_yFS275_ 1 1
Schizosaccharomyces_pombe   (Fission yeast)   1 1
Catenaria_anguillulae_PL171_v1.0 1 1
Spizellomyces_punctatus_DAOM_BR117_ 1 1
Dictyostelium_discoideum 15 15
Dictyostelium_purpureum_ 15 14
Entamoeba_dispar_1.2 4 4
Entamoeba_invadens_1.2 19 19
Entamoeba_histolytica_1 4 4
Selaginella_moellendorffii_ 4 4
Picea_abies   (Norway spruce)   1 1
Eucalyptus_grandis_v201   (Rose gum)   3 2
Theobroma_cacao_B97-61/B2_v1   (Cacao)   2 2
Gossypium_raimondii_v221 12 9
Citrus_clementina_v165 3 3
Citrus_sinensis_v154   (Sweet orange)   4 4
Thellungiella_halophila_v173 5 4
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   4 3
Capsella_rubella_v183 6 5
Arabidopsis_lyrata_   (Lyrate rockcress)   5 4
Arabidopsis_thaliana_10   (Thale cress)   10 7
Carica_papaya_   (Papaya)   2 2
Medicago_truncatula_   (Barrel medic)   2 2
Phaseolus_vulgaris_v186   (French bean)   3 3
Glycine_max_v109   (Soybean)   4 4
Cucumis_sativus_v122   (Cucumber)   2 2
Fragaria_vesca_   (Wild strawberry)   2 2
Malus_domestica_v196   (Apple)   4 4
Prunus_persica_v139   (Peach)   2 2
Linum_usitatissimum_v200   (Flax)   8 8
Manihot_esculenta_v147   (Cassava)   3 3
Populus_trichocarpa_v156   (Black cottonwood)   5 5
Vitis_vinifera_   (Wine grape)   5 5
Mimulus_guttatus_v140   (Spotted monkey flower)   2 2
Solanum_lycopersicum_v.2.3   (Tomato)   2 2
Solanum_tuberosum_   (Potato)   3 3
Actinidia_chinensis_Hongyang_ 2 2
Aquilegia_coerulea_v195 2 2
Triticum_urartu_22 3 2
Triticum_aestivum_22   (Bread wheat)   8 6
Aegilops_tauschii_22 3 2
Brachypodium_distachyon_   (Stiff brome)   10 6
Oryza_barthii_22   (African wild rice)   4 3
Oryza_meridionalis_22 5 4
Oryza_glumaepatula_22 4 3
Oryza_glaberrima   (African rice)   3 2
Oryza_punctata_22 7 4
Oryza_nivara_22 6 5
Oryza_brachyantha_22   (Malo sina)   3 2
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   3 2
Oryza_sativa_v193   (Rice)   3 2
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   6 4
Panicum_virgatum_v202   (Switchgrass)   6 4
Setaria_italica_v164   (Foxtail millet)   3 2
Zea_mays_subsp._mays_   (Maize)   7 5
Zea_mays_v181   (Maize)   7 5
Sorghum_bicolor_   (Sorghum)   3 2
Musa_balbisiana   (Balbis banana)   5 3
Musa_acuminata_22   (Wild Malaysian banana)   5 3
Amborella_trichopoda_22 3 2
Physcomitrella_patens 3 3
Coccomyxa_subellipsoidea_sp._C-169_v2 3 3
Asterochloris_sp._Cgr/DA1pho_v1.0 2 2
Chlorella_vulgaris_ 2 2
Volvox_carteri_f._nagariensis_ 1 1
Volvox_carteri_v199 1 1
Chlamydomonas_reinhardtii_4.0 1 1
Ostreococcus_tauri_ 1 1
Bathycoccus_prasinos_ 1 1
Micromonas_pusilla_CCMP1545_v3.0 1 1
Thecamonas_trahens_ATCC_50062_ 9 9
Bigelowiella_natans_CCMP2755_22 3 2
Cyanophora_paradoxa_ 4 4
Ectocarpus_siliculosus 7 7
Aureococcus_anophagefferens_ 1 1
Albugo_laibachii_22 3 3
Pythium_iwayamai_DAOM_BR242034_22 4 4
Pythium_arrhenomanes_ATCC_12531_22 4 4
Pythium_ultimum_v1.7-2 5 5
Pythium_aphanidermatum_DAOM_BR444_22 4 4
Pythium_irregulare_DAOM_BR486_22 5 5
Pythium_vexans_DAOM_BR484_22 6 6
Phytophthora_ramorum_1.1   (Sudden oak death agent)   3 3
Phytophthora_sojae_1.1 4 4
Phytophthora_infestans_T30-4_ 5 5
Phytophthora_capsici_ 3 3
Hyaloperonospora_arabidopsidis_22 1 1
Phaeodactylum_tricornutumCCAP_1055/1 2 2
Fragilariopsis_cylindrus 1 1
Thalassiosira_pseudonana_CCMP1335 1 1
Paramecium_tetraurelia_ 1 1
Tetrahymena_thermophila_SB210_1_ 1 1
Naegleria_gruberi_ 4 4
Trichomonas_vaginalis_ 2 2
Guillardia_theta_CCMP2712_v1.0_ 3 3
Nostoc_punctiforme_PCC_73102 1 1
Simkania_negevensis_Z 1 1
Novosphingobium_aromaticivorans_DSM_12444 1 1
Legionella_longbeachae_NSW150 1 1

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   198 178
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   95 86
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   51 44
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   66 62
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   88 84
Cryptococcus_neoformans_var._grubii_H99_ 1 1
Cryptococcus_neoformans_B-3501A_ 1 1
Cryptococcus_neoformans_JEC21_ 1 1
Paracoccidioides_brasiliensis_Pb01_ 1 1
Paracoccidioides_brasiliensis_Pb03_ 1 1
Coccidioides_posadasii_str._Silveira_ 1 1
Coccidioides_immitis_RMSCC_3703_ 1 1
Coccidioides_immitis_RMSCC_2394_ 1 1
Coccidioides_immitis_H538.4_ 1 1
Ajellomyces_dermatitidis_ER-3_ 1 1
Histoplasma_capsulatum_H88 1 1
Histoplasma_capsulatum_G186AR 1 1
Aspergillus_fumigatus_A1163_ 1 1
Candida_albicans_WO-1_ 1 1
Saccharomyces_cerevisiae_UC5 1 1
Saccharomyces_cerevisiae_PW5 1 1
Saccharomyces_cerevisiae_CLIB324 1 1
Saccharomyces_cerevisiae_CBS7960 1 1
Saccharomyces_cerevisiae_YJM269 1 1
Saccharomyces_cerevisiae_T7 1 1
Saccharomyces_cerevisiae_FostersB 1 1
Saccharomyces_cerevisiae_FostersO 1 1
Saccharomyces_cerevisiae_LalvinQA23 1 1
Saccharomyces_cerevisiae_AWRI796 1 1
Saccharomyces_cerevisiae_Sigma1278b 1 1
Saccharomyces_cerevisiae_W303 1 1
Saccharomyces_cerevisiae_JAY291 1 1
Saccharomyces_cerevisiae_CLIB215 1 1
Saccharomyces_cerevisiae_YJM789_ 1 1
Saccharomyces_cerevisiae_YJM789 1 1
Saccharomyces_cerevisiae_RM11-1a 1 1
Saccharomyces_cerevisiae_RM11-1a_ 1 1
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   1 1
Schizosaccharomyces_pombe_972h-_ 1 1
Batrachochytrium_dendrobatidis_JEL423_ 1 1
Batrachochytrium_dendrobatidis_JAM81_ 1 1
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   2 2
Hordeum_vulgare_22   (Domesticated barley)   6 4
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   3 2

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Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   125 115
Pan_troglodytes_69_2.1.4   (Chimpanzee)   114 104
Gorilla_gorilla_69_3.1   (Western gorilla)   123 113
Pongo_abelii_69_2   (Sumatran orangutan)   118 108
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   114 105
Macaca_mulatta_69_1   (Rhesus monkey)   118 106
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   126 115
Otolemur_garnettii_69_3   (Small-eared galago)   120 110
Microcebus_murinus_69_1   (Gray mouse lemur)   95 88
Rattus_norvegicus_69_3.4   (Norway rat)   118 107
Mus_musculus_69_38   (House mouse)   124 114
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   108 99
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   113 104
Cavia_porcellus_69_3   (Domestic guinea pig)   116 106
Oryctolagus_cuniculus_69_2   (Rabbit)   108 99
Ochotona_princeps_69   (American pika)   98 89
Tupaia_belangeri_69   (Northern tree shrew)   84 78
Sus_scrofa_69_10.2   (Pig)   131 117
Bos_taurus_69_3.1   (Cattle)   125 113
Vicugna_pacos_69_1   (Alpaca)   61 56
Tursiops_truncatus_69_1   (Bottlenose dolphin)   112 104
Mustela_putorius_furo_69_1.0   (Domestic ferret)   121 111
Ailuropoda_melanoleuca_69_1   (Giant panda)   119 107
Canis_familiaris_69_3.1   (Dog)   119 109
Felis_catus_69   (Domestic cat)   101 92
Equus_caballus_69_2   (Horse)   115 106
Myotis_lucifugus_69_2.0   (Little brown bat)   117 107
Pteropus_vampyrus_69_1   (Large flying fox)   116 105
Sorex_araneus_69_1   (European shrew)   76 69
Erinaceus_europaeus_69   (Western European hedgehog)   82 74
Procavia_capensis_69_1   (Cape rock hyrax)   98 89
Loxodonta_africana_69_3   (African savanna elephant)   121 111
Echinops_telfairi_69   (Small Madagascar hedgehog)   89 87
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   77 70
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   57 53
Macropus_eugenii_69_1.0   (Tammar wallaby)   102 93
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   112 101
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   118 108
Ornithorhynchus_anatinus_69_5   (Platypus)   87 79
Petromyzon_marinus_69_7.0   (Sea lamprey)   49 46
Meleagris_gallopavo_69_2   (Turkey)   99 88
Gallus_gallus_69_2   (Chicken)   99 86
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   102 91
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   105 93
Anolis_carolinensis_69_2.0   (Green anole)   105 95
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   116 102
Latimeria_chalumnae_69_1   (Coelacanth)   119 108
Gadus_morhua_69_1   (Atlantic cod)   128 115
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   149 135
Takifugu_rubripes_69_4   (Torafugu)   139 121
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   142 127
Oryzias_latipes_69_1   (Japanese medaka)   122 108
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   147 132
Oreochromis_niloticus_69_1.0   (Nile tilapia)   148 132
Danio_rerio_69_9   (Zebrafish)   155 141
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   37 33
Ciona_intestinalis_69   (Vase tunicate)   55 49
Drosophila_melanogaster_69_5   (Fruit fly)   38 33
Caenorhabditis_elegans_69_215   (Roundworm)   70 66
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   1 1
Arabidopsis_thaliana_10   (Thale cress)   4 3

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   466 420
Homo_sapiens__(NCBI_version)   (Human)   224 203
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   123 113
Heliconius_numata__(Incomplete) 5 5
Loa_loa_v3.3_(Request)   (Eye worm)   52 47
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   50 47
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   43 39
Encephalitozoon_intestinalis__(endoparasite) 1 1
Encephalitozoon_cuniculi_(endoparasite) 1 1
Lotus_japonicus__(Early_assembly) 3 3
Malus_x_domestica_(Duplicate)   (Apple)   4 4
Ricinus_communis__(Early_assembly)   (Castor bean)   2 2
Nicotiana_benthamiana_0.4.4_(Early_draft) 4 4
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   2 2
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   2 2
Phoenix_dactylifera__(Early_draft)   (Date palm)   2 2
Uniprot_2018_03_genome 41145 36814
NCBI_2017_08_genome 70595 63866
NCBI_viral_sequences_(Viral) 7 7
Protozoadb_2010_08_(Protozoadb) 20 20
UniProt__viral_sequences_(Viral) 52 52
TargetDB__(Targets) 260 245
PDB_chains_(SCOP_1.75)_(PDB) 94 90
Protein_Data_Bank_(all_PDB_sequenc) 810 734
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 1719 1719
STRING_v9.0.5_(STRING) 4341 3903

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