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Domain combinations for ADP-ribosylation superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a ADP-ribosylation domain in that genome.

Complete genomes
Genome Number Proteins

Homo_sapiens_76_38 (Human) 81 81

Pan_troglodytes_76_2.1.4 (Chimpanzee) 22 22

Gorilla_gorilla_76_3.1 (Western gorilla) 35 35

Pongo_abelii_76_2 (Sumatran orangutan) 21 21

Nomascus_leucogenys_76_1.0 (Northern white-cheeked gibbon) 25 25

Papio_anubis_76 (Olive baboon) 24 24

Macaca_mulatta_76_1 (Rhesus monkey) 31 31

Callithrix_jacchus_76_3.2.1 (White-tufted-ear marmoset) 51 51

Otolemur_garnettii_76_3 (Small-eared galago) 25 25

Microcebus_murinus_76_1 (Gray mouse lemur) 21 19

Rattus_norvegicus_76_5.0 (Norway rat) 24 24

Mus_musculus_76_38 (House mouse) 52 52

Dipodomys_ordii_76_1 (Ord's kangaroo rat) 18 17

Ictidomys_tridecemlineatus_76_2 (Thirteen-lined ground squirrel) 23 23

Heterocephalus_glaber_v1.7-2 (Naked mole-rat) 22 22

Cavia_porcellus_76_3 (Domestic guinea pig) 26 26

Oryctolagus_cuniculus_76_2 (Rabbit) 33 33

Ochotona_princeps_76 (American pika) 24 22

Tupaia_belangeri_76 (Northern tree shrew) 18 18

Sus_scrofa_76_10.2 (Pig) 32 32

Bos_taurus_76_3.1 (Cattle) 30 30

Ovis_aries_76_3.1 (Sheep) 31 31

Vicugna_pacos_76_1 (Alpaca) 15 14

Tursiops_truncatus_76_1 (Bottlenose dolphin) 21 21

Mustela_putorius_furo_76_1.0 (Domestic ferret) 23 23

Ailuropoda_melanoleuca_76_1 (Giant panda) 23 23

Canis_familiaris_76_3.1 (Dog) 34 34

Felis_catus_76_6.2 (Domestic cat) 22 22

Equus_caballus_76_2 (Horse) 26 26

Myotis_lucifugus_76_2.0 (Little brown bat) 33 33

Pteropus_vampyrus_76_1 (Large flying fox) 24 24

Sorex_araneus_76_1 (European shrew) 17 17

Erinaceus_europaeus_76 (Western European hedgehog) 19 19

Procavia_capensis_76_1 (Cape rock hyrax) 23 21

Loxodonta_africana_76_3 (African savanna elephant) 32 32

Echinops_telfairi_76 (Small Madagascar hedgehog) 17 17

Dasypus_novemcinctus_76_2 (Nine-banded armadillo) 25 25

Choloepus_hoffmanni_76_1 (Hoffmann's two-fingered sloth) 16 15

Macropus_eugenii_76_1.0 (Tammar wallaby) 21 19

Sarcophilus_harrisii_76_7.0 (Tasmanian devil) 27 27

Monodelphis_domestica_76_5 (Gray short-tailed opossum) 27 26

Ornithorhynchus_anatinus_76_5 (Platypus) 27 27

Saccoglossus_kowalevskii_v3.0 36 36

Petromyzon_marinus_76_7.0 (Sea lamprey) 23 21

Meleagris_gallopavo_76_2 (Turkey) 27 27

Gallus_gallus_76_4 (Chicken) 25 25

Anas_platyrhynchos_76_1.0 (Mallard) 21 21

Taeniopygia_guttata_76_3.2.4 (Zebra finch) 17 17

Ficedula_albicollis_76_1.0 (Collared flycatcher) 23 23

Pelodiscus_sinensis_76_1.0 (Chinese soft-shelled turtle) 33 33

Anolis_carolinensis_76_2.0 (Green anole) 30 30

Xenopus_laevis_ (African clawed frog) 36 36

Xenopus_tropicalis_76_4.2 (Tropical clawed frog) 43 41

Latimeria_chalumnae_76_1 (Coelacanth) 43 41

Lepisosteus_oculatus_76 (Spotted gar) 47 45

Gadus_morhua_76_1 (Atlantic cod) 60 60

Tetraodon_nigroviridis_76_8 (Spotted green pufferfish) 28 28

Takifugu_rubripes_76_4 (Torafugu) 49 49

Gasterosteus_aculeatus_76_1 (Three-spined stickleback) 32 32

Oryzias_latipes_76_1 (Japanese medaka) 30 30

Xiphophorus_maculatus_76_4.4.2 (Southern platyfish) 39 39

Poecilia_formosa_76 (Amazon molly) 40 39

Oreochromis_niloticus_76_1.0 (Nile tilapia) 46 44

Astyanax_mexicanus_76 (Mexican tetra) 48 44

Danio_rerio_76_9 (Zebrafish) 58 55

Oikopleura_dioica 7 6

Ciona_savignyi_76_2.0 (Pacific transparent sea squirt) 24 24

Ciona_intestinalis_76 (Vase tunicate) 17 17

Strongylocentrotus_purpuratus_v3.1 (Purple sea urchin) 14 14

Adineta_vaga 685 678

Octopus_bimaculoides_280 21 20

Crassostrea_gigas_22 (Pacific oyster) 55 51

Lottia_gigantea_ (Owl limpet) 20 20

Helobdella_robusta_ 19 18

Capitella_sp._I_ 32 32

Danaus_plexippus_OGS1.0 (Monarch butterfly) 2 2

Heliconius_melpomene_ (Postman butterfly) 2 2

Bombyx_mori_ (Domestic silkworm) 3 3

Nasonia_vitripennis_ (Jewel wasp) 4 4

Apis_mellifera_38.2d_(Not_maintained) (Honey bee) 7 7

Harpegnathos_saltator_v3.3 (Jerdon's jumping ant) 4 4

Linepithema_humile_v1.1 (Argentine ant) 4 4

Pogonomyrmex_barbatus_v1.2 (Red harvester ant) 4 4

Solenopsis_invicta_v.2.2.3 (Red fire ant) 4 4

Acromyrmex_echinatior_v3.8 (Panamanian leafcutter ant) 4 4

Atta_cephalotes_v1.1 4 4

Camponotus_floridanus_v3.3 (Florida carpenter ant) 4 4

Lucilia_cuprina (Australian sheep blowfly) 2 2

Drosophila_grimshawi_1.3 3 3

Drosophila_willistoni_1.3 2 2

Drosophila_pseudoobscura_2.13 3 3

Drosophila_persimilis_1.3 2 2

Drosophila_suzukii 3 2

Drosophila_yakuba_1.3 3 3

Drosophila_simulans_1.3 2 2

Drosophila_sechellia_1.3 2 2

Drosophila_melanogaster_76_5 (Fruit fly) 5 5

Drosophila_erecta_1.3 2 2

Drosophila_ananassae_1.3 2 2

Drosophila_virilis_1.2 3 3

Drosophila_mojavensis_1.3 3 3

Aedes_aegypti_55_(Not_maintained) (Yellow fever mosquito) 5 5

Culex_pipiens_quinquefasciatus_ (Southern house mosquito) 3 3

Anopheles_darlingi_22 (American malaria mosquito) 2 2

Anopheles_gambiae_49_3j (African malaria mosquito) 3 3

Tribolium_castaneum_3.0 (Red flour beetle) 12 11

Pediculus_humanus_corporis__(Early_assembly) (Human body louse) 3 3

Acyrthosiphon_pisum_ (Pea aphid) 5 5

Rhodnius_prolixus_22 2 2

Daphnia_pulex_ (Common water flea) 14 14

Strigamia_maritima_22 6 6

Sarcoptes_scabiei 3 3

Tetranychus_urticae_ (Two-spotted spider mite) 2 2

Ixodes_scapularis__(Preliminary) (Black-legged tick) 6 6

Pristionchus_pacificus_ 14 13

Meloidogyne_incognita_ (Southern root-knot nematode) 3 3

Onchocerca_volvulus_22 3 3

Brugia_malayi_WS250 (Agent of lymphatic filariasis) 4 4

Caenorhabditis_japonica_ 2 2

Caenorhabditis_brenneri_ 7 7

Caenorhabditis_remanei_ 8 8

Caenorhabditis_elegans_76_235 (Roundworm) 4 4

Caenorhabditis_briggsae_2 3 3

Trichinella_spiralis_22 2 2

Hymenolepis_microstoma_ 7 6

Echinococcus_multilocularis_ 4 4

Echinococcus_granulosus_ 3 3

Taenia_solium_ (Pork tapeworm) 5 5

Schistosoma_mansoni_ 7 6

Mnemiopsis_leidyi (Sea walnut) 13 13

Acropora_digitifera_v1.0 48 45

Nematostella_vectensis_1.0 (Starlet sea anemone) 15 15

Hydra_vulgaris 11 11

Amphimedon_queenslandica 51 51

Trichoplax_adhaerens_ 27 27

Proterospongia_sp._ATCC_50818_ 53 53

Monosiga_brevicollis_ 51 49

Sphaeroforma_arctica_JP610_ 10 10

Capsaspora_owczarzaki_ATCC_30864_ 14 14

Conidiobolus_coronatus_NRRL28638_v1.0 5 5

Mortierella_verticillata_NRRL_6337_ 6 6

Phycomyces_blakesleeanus_ 1 1

Rhizopus_oryzae_RA_99-880_ 1 1

Mucor_circinelloides_ 2 2

Rhizomucor_miehei_CAU432_ 1 1

Malassezia_globosa_CBS_7966_ 2 2

Sporisorium_reilianum_22 2 2

Ustilago_maydis_ 2 2

Mixia_osmundae_IAM_14324_v1.0 2 2

Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 1 1

Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 1 1

Melampsora_laricis-populina_ 1 1

Rhodotorula_graminis_WP1_v1.0 3 3

Sporobolomyces_roseus_IAM_13481_ 1 1

Microbotryum_violaceum_22 4 4

Wallemia_sebi_v1.0 1 1

Sphaerobolus_stellatus_v1.0 6 6

Piloderma_croceum_F_1598_v1.0 15 15

Serpula_lacrymans_var._lacrymans_S7.9_ 20 19

Coniophora_puteana 13 13

Hydnomerulius_pinastri_v2.0 8 8

Paxillus_rubicundulus_Ve08.2h10_v1.0 6 6

Pisolithus_microcarpus_441_v1.0 5 5

Pisolithus_tinctorius_Marx_270_v1.0 6 6

Scleroderma_citrinum_Foug_A_v1.0 7 7

Coprinopsis_cinerea_okayama7_130_v3 12 12

Pleurotus_ostreatus_ (Oyster mushroom) 8 8

Amanita_thiersii_Skay4041_v1.0 8 8

Amanita_muscaria_Koide_v1.0 (Fly agaric) 6 6

Galerina_marginata_v1.0 12 12

Hebeloma_cylindrosporum_h7_v2.0 20 20

Laccaria_bicolor_S238N-H82_ 12 12

Agaricus_bisporus_var._bisporus_ 5 5

Schizophyllum_commune_ 12 12

Stereum_hirsutum_FP-91666_SS1__v1.0 19 19

Heterobasidion_annosum_ 3 3

Gloeophyllum_trabeumv1.0 8 8

Punctularia_strigosozonata_v1.0 4 4

Sebacina_vermifera_MAFF_305830_v1.0 26 26

Fomitiporia_mediterranea_v1.0 4 4

Tulasnella_calospora_AL13/4D_v1.0 66 65

Postia_placenta_ 19 19

Wolfiporia_cocos_MD-104_SS10__v1.0 10 10

Fomitopsis_pinicolav1.0 13 13

Fomitopsis_pinicola_FP-58527_SS1_v3.0 13 12

Phanerochaete_chrysosporium_RP-78_2.1 8 8

Dichomitus_squalens 4 4

Trametes_versicolor_v1.0 5 5

Tremella_mesenterica_ (Witches' butter) 4 3

Daldinia_eschscholzii_EC12_v1.0 6 6

Apiospora_montagnei_NRRL_25634_v1.0 9 9

Magnaporthe_poae_ATCC_64411_22 7 7

Magnaporthe_grisea_70-15_ 22 22

Podospora_anserina_ 3 3

Sporotrichum_thermophile_ATCC_42464_ 5 5

Thielavia_terrestris_NRRL_8126_ 5 5

Chaetomium_globosum_CBS_148.51_ 5 5

Neurospora_tetrasperma_ 4 4

Neurospora_discreta_FGSC_8579_ 3 3

Neurospora_crassa_OR74A_ 4 4

Cryphonectria_parasitica_ (Chestnut blight fungus) 6 6

Verticillium_albo-atrum_VaMs.102_ 4 4

Verticillium_dahliae_VdLs.17_ 5 5

Acremonium_alcalophilumv_1.0 4 4

Glomerella_graminicola_22 5 5

Fusarium_graminearum_ 5 5

Nectria_haematococca_mpVI_ 7 7

Fusarium_oxysporum_f._sp._lycopersici_4286_ 7 7

Fusarium_verticillioides_7600_ 4 4

Trichoderma_asperellum_CBS_433.97_v1.0 4 4

Trichoderma_atroviride_ 4 4

Trichoderma_citrinoviride_v1.0 4 4

Trichoderma_reesei_1.2 5 5

Trichoderma_virens_Gv29-8_ 5 5

Trichoderma_longibrachiatum_ATCC_18648_v1.0 6 6

Trichoderma_harzianum_CBS_226.95_v1.0 5 5

Amorphotheca_resinae_v1.0 (Creosote fungus) 6 6

Botrytis_cinerea_B05.10_ 4 4

Sclerotinia_sclerotiorum_ 4 4

Blumeria_graminis_22 3 3

Didymella_exigua_CBS_183.55_v1.0 5 5

Leptosphaeria_maculans_22 5 5

Setosphaeria_turcica_v1.0 5 5

Cochliobolus_miyabeanus_ATCC_44560_v1.0 4 4

Cochliobolus_victoriae_FI3_v1.0 5 5

Cochliobolus_carbonum_26-R-13_v1.0 4 4

Cochliobolus_heterostrophus_ (Southern corn leaf blight pathogen) 4 4

Alternaria_brassicicola_ 4 4

Cochliobolus_lunatus_m118_v2.0 5 5

Pyrenophora_teres_f._teres_22 4 4

Pyrenophora_tritici-repentis_ 4 4

Stagonospora_nodorum_ 5 5

Mycosphaerella_graminicola_IPO323_ 3 3

Zasmidium_cellare_ATCC_36951_v1.0 6 6

Dothistroma_septosporum 6 6

Septoria_musiva_v1.0 4 4

Mycosphaerella_fijiensis_CIRAD86_ 4 4

Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 3 3

Paracoccidioides_brasiliensis_Pb18_ 3 3

Coccidioides_posadasii_RMSCC_3488_ 3 3

Coccidioides_immitis_RS_ 3 3

Ajellomyces_dermatitidis_SLH14081_ 2 2

Histoplasma_capsulatum_class_NAmI_strain_WU24_ 3 3

Microsporum_canis_CBS_113480_ 3 3

Trichophyton_equinum_CBS_127.97_ 3 3

Trichophyton_verrucosum_HKI_0517_ 3 3

Arthroderma_benhamiae_CBS_112371_ 3 3

Trichophyton_tonsurans_CBS_112818_ 3 3

Trichophyton_rubrum_CBS_118892_ 3 3

Uncinocarpus_reesii_1704_ 3 3

Aspergillus_zonatus_v1.0 5 5

Penicillium_chrysogenum_Wisconsin_54-1255_ 6 6

Penicillium_chrysogenum_v1.0 5 5

Aspergillus_acidus_v1.0 4 4

Aspergillus_fumigatus_Af293 4 4

Aspergillus_brasiliensis_v1.0 4 4

Aspergillus_nidulans_FGSC_A4_ 4 4

Aspergillus_sydowii_v1.0 5 5

Aspergillus_versicolor_v1.0 5 5

Aspergillus_glaucus 4 4

Aspergillus_carbonarius_ITEM_5010_ 3 3

Neosartorya_fischeri_NRRL_181_ 4 4

Aspergillus_terreus_NIH2624_ 4 4

Aspergillus_tubingensis_v1.0 4 4

Aspergillus_wentii_v1.0 4 4

Aspergillus_oryzae_RIB40_ 3 3

Aspergillus_niger_22 4 4

Aspergillus_niger_ATCC_1015_ 4 4

Aspergillus_flavus_NRRL3357_ 4 4

Aspergillus_clavatus_NRRL_1_ 4 4

Penicillium_marneffei_ATCC_18224_ 4 4

Tuber_melanosporum_Mel28_22 4 4

Tuber_melanosporum_Vittad_ (Perigord truffle) 4 4

Hansenula_polymorpha_v2.0 1 1

Dekkera_bruxellensis_CBS_2499_v2.0 1 1

Pichia_membranifaciensv1.0 1 1

Candida_tanzawaensis_NRRL_Y-17324__v1.0 1 1

Candida_dubliniensis_CD36_ 1 1

Candida_tropicalis_MYA-3404_ 1 1

Candida_parapsilosis_ 1 1

Candida_albicans_SC5314 1 1

Lodderomyces_elongisporus_NRRL_YB-4239_ 1 1

Babjeviella_inositovora_NRRL_Y-12698_v1.0 1 1

Pichia_stipitis_CBS_6054_ 1 1

Candida_guilliermondii_ATCC_6260_ 1 1

Hyphopichia_burtonii_NRRL_Y-1933_v1.0 1 1

Debaromyces_hansenii 1 1

Wickerhamomyces_anomalus 1 1

Pichia_pastoris_GS115_ 1 1

Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 1 1

Yarrowia_lipolytica_CLIB122 3 3

Candida_lusitaniae_ATCC_42720_ 1 1

Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 1 1

Vanderwaltozyma_polyspora_DSM_70294_ 1 1

Candida_glabrata_CBS138 1 1

Kluyveromyces_thermotolerans_CBS_6340 1 1

Lachancea_kluyveri_ 1 1

Kluyveromyces_waltii 1 1

Ashbya_gossypii_ATCC_10895_ 1 1

Zygosaccharomyces_rouxii_ 1 1

Saccharomyces_mikatae_MIT 1 1

Saccharomyces_paradoxus_MIT 1 1

Saccharomyces_cerevisiae_76 (Baker's yeast) 1 1

Saccharomyces_bayanus_MIT 1 1

Kluyveromyces_lactis 1 1

Schizosaccharomyces_cryophilus_OY26_22 1 1

Schizosaccharomyces_octosporus_yFS286_ 1 1

Schizosaccharomyces_japonicus_yFS275_ 1 1

Schizosaccharomyces_pombe (Fission yeast) 1 1

Catenaria_anguillulae_PL171_v1.0 7 7

Allomyces_macrogynus_ATCC_38327_ 3 3

Spizellomyces_punctatus_DAOM_BR117_ 6 6

Dictyostelium_discoideum 20 20

Dictyostelium_purpureum_ 24 24

Entamoeba_dispar_1.2 8 8

Entamoeba_invadens_1.2 15 15

Entamoeba_histolytica_1 9 9

Selaginella_moellendorffii_ 41 41

Pinus_taeda (Loblolly pine) 24 23

Picea_abies (Norway spruce) 14 14

Eucalyptus_grandis_v201 (Rose gum) 21 21

Theobroma_cacao_B97-61/B2_v1 (Cacao) 19 19

Gossypium_raimondii_v221 68 68

Citrus_clementina_v165 25 25

Citrus_sinensis_v154 (Sweet orange) 17 17

Thellungiella_halophila_v173 21 21

Brassica_rapa_Chiifu-401_1.2 (Field mustard) 30 29

Capsella_rubella_v183 20 20

Arabidopsis_lyrata_ (Lyrate rockcress) 25 25

Arabidopsis_thaliana_10 (Thale cress) 24 24

Carica_papaya_ (Papaya) 13 13

Medicago_truncatula_ (Barrel medic) 40 40

Phaseolus_vulgaris_v186 (French bean) 22 22

Glycine_max_v109 (Soybean) 40 39

Cucumis_sativus_v122 (Cucumber) 25 25

Fragaria_vesca_ (Wild strawberry) 20 20

Malus_domestica_v196 (Apple) 38 37

Prunus_persica_v139 (Peach) 17 17

Linum_usitatissimum_v200 (Flax) 28 28

Manihot_esculenta_v147 (Cassava) 27 27

Populus_trichocarpa_v156 (Black cottonwood) 34 34

Vitis_vinifera_ (Wine grape) 17 17

Mimulus_guttatus_v140 (Spotted monkey flower) 23 23

Solanum_lycopersicum_v.2.3 (Tomato) 24 24

Solanum_tuberosum_ (Potato) 28 28

Actinidia_chinensis_Hongyang_ 27 26

Aquilegia_coerulea_v195 28 27

Triticum_urartu_22 17 16

Triticum_aestivum_22 (Bread wheat) 46 46

Aegilops_tauschii_22 18 18

Brachypodium_distachyon_ (Stiff brome) 30 30

Oryza_barthii_22 (African wild rice) 26 25

Oryza_meridionalis_22 18 18

Oryza_glumaepatula_22 29 29

Oryza_glaberrima (African rice) 17 17

Oryza_punctata_22 25 25

Oryza_nivara_22 29 29

Oryza_brachyantha_22 (Malo sina) 15 15

Oryza_sativa_ssp._japonica_5.0 (Japanese rice) 32 32

Oryza_sativa_v193 (Rice) 32 32

Phyllostachys_heterocyclavar._pubescens (Kikko-chiku) 24 24

Panicum_virgatum_v202 (Switchgrass) 39 39

Setaria_italica_v164 (Foxtail millet) 20 20

Zea_mays_subsp._mays_ (Maize) 32 32

Zea_mays_v181 (Maize) 39 39

Sorghum_bicolor_ (Sorghum) 22 20

Musa_balbisiana (Balbis banana) 38 37

Musa_acuminata_22 (Wild Malaysian banana) 39 39

Amborella_trichopoda_22 14 14

Physcomitrella_patens 14 13

Asterochloris_sp._Cgr/DA1pho_v1.0 1 1

Chlorella_variabilis_sp._NC64A_ 3 3

Volvox_carteri_f._nagariensis_ 3 3

Volvox_carteri_v199 3 3

Chlamydomonas_reinhardtii_4.0 4 4

Ostreococcus_sp._RCC809_ 1 1

Bathycoccus_prasinos_ 1 1

Micromonas_sp._RCC299_ 3 3

Micromonas_pusilla_CCMP1545_v3.0 3 3

Porphyridium_purpureum_02_2012 3 3

Thecamonas_trahens_ATCC_50062_ 20 20

Bigelowiella_natans_CCMP2755_22 25 25

Giardia_lamblia_2.3 1 1

Cyanophora_paradoxa_ 13 13

Leishmania_mexicana_2.4 1 1

Leishmania_major_strain_Friedlin_ 1 1

Leishmania_infantum_JPCM5_2.4 1 1

Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 1 1

Trypanosoma_vivax_ 3 3

Trypanosoma_cruzi_strain_CL_Brener 3 3

Trypanosoma_congolense_2.4 3 3

Trypanosoma_brucei_gambiense_v4.1 3 3

Trypanosoma_brucei_TREU927_v4.1 3 3

Ectocarpus_siliculosus 28 28

Aureococcus_anophagefferens_ 8 8

Albugo_laibachii_22 6 6

Pythium_iwayamai_DAOM_BR242034_22 9 9

Pythium_arrhenomanes_ATCC_12531_22 7 7

Pythium_ultimum_v1.7-2 9 9

Pythium_aphanidermatum_DAOM_BR444_22 7 7

Pythium_irregulare_DAOM_BR486_22 8 8

Pythium_vexans_DAOM_BR484_22 9 9

Phytophthora_ramorum_1.1 (Sudden oak death agent) 9 9

Phytophthora_sojae_1.1 5 4

Phytophthora_infestans_T30-4_ 4 3

Phytophthora_capsici_ 5 5

Hyaloperonospora_arabidopsidis_22 2 2

Phaeodactylum_tricornutumCCAP_1055/1 1 1

Fragilariopsis_cylindrus 10 10

Thalassiosira_pseudonana_CCMP1335 1 1

Perkinsus_marinus_ATCC_50983_ 10 10

Paramecium_tetraurelia_ 35 35

Tetrahymena_thermophila_SB210_1_ 42 41

Ichthyophthirius_multifiliis_strain_G5_ 4 4

Cryptosporidium_hominis 2 2

Cryptosporidium_muris 2 2

Cryptosporidium_parvum_Iowa_II 2 2

Neospora_caninum 6 4

Toxoplasma_gondii_VEG 5 3

Toxoplasma_gondii_ME49 6 4

Toxoplasma_gondii_GT1 5 3

Babesia_bovis_T2Bo_ 2 2

Theileria_parva__ 1 1

Theileria_annulata 1 1

Plasmodium_falciparum_3D7_ 1 1

Plasmodium_vivax_SaI-1_7.0 1 1

Plasmodium_knowlesi_strain_H_ 1 1

Plasmodium_yoelii_ssp._yoelii_1_ 1 1

Plasmodium_chabaudi_ 2 2

Plasmodium_berghei_ANKA_ 1 1

Symbiodinium_minutum_clade_B1_v1.2 164 159

Naegleria_gruberi_ 29 29

Trichomonas_vaginalis_ 9 9

Guillardia_theta_CCMP2712_v1.0_ 44 44

Emiliania_huxleyi_CCMP1516_ 125 124

Leptolyngbya_sp._PCC_7376 2 2

Acaryochloris_marina_MBIC11017 2 2

Synechococcus_sp._CC9311 1 1

Microcoleus_sp._PCC_7113 1 1

Geitlerinema_sp._PCC_7407 1 1

Cyanothece_sp._PCC_8802 1 1

Gloeocapsa_sp._PCC_7428 1 1

Microcystis_aeruginosa_NIES-843 1 1

Gloeobacter_violaceus_PCC_7421 2 2

Rivularia_sp._PCC_7116 2 2

Calothrix_sp._PCC_7507 2 2

Anabaena_variabilis_ATCC_29413 2 2

Nostoc_sp._PCC_7107 1 1

Nostoc_punctiforme_PCC_73102 2 2

Nostoc_sp._PCC_7120 1 1

Nostoc_sp._PCC_7524 1 1

Mycoplasma_penetrans_HF-2 1 1

Mycoplasma_pneumoniae_309 1 1

Slackia_heliotrinireducens_DSM_20476 2 2

Ilumatobacter_coccineus 1 1

Thermobispora_bispora_DSM_43833 1 1

Nakamurella_multipartita_DSM_44233 2 2

Modestobacter_marinus 2 2

Blastococcus_saxobsidens_DD2 1 1

Geodermatophilus_obscurus_DSM_43160 2 2

Catenulispora_acidiphila_DSM_44928 2 2

Stackebrandtia_nassauensis_DSM_44728 2 2

Frankia_sp._EAN1pec 1 1

Frankia_alni_ACN14a 1 1

Thermobifida_fusca_YX 1 1

Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 11 5

Thermomonospora_curvata_DSM_43183 1 1

Streptosporangium_roseum_DSM_43021 4 4

Kitasatospora_setae_KM-6054 4 4

Streptomyces_coelicolor_A3(2) 3 3

Streptomyces_sp._PAMC26508 3 3

Streptomyces_flavogriseus_ATCC_33331 3 3

Streptomyces_sp._SirexAA-E 3 3

Streptomyces_griseus_subsp._griseus_NBRC_13350 2 2

Streptomyces_avermitilis_MA-4680 3 3

Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1 1

Streptomyces_scabiei_87.22 4 4

Streptomyces_hygroscopicus_subsp._jinggangensis_5008 2 2

Actinosynnema_mirum_DSM_43827 2 2

Saccharomonospora_viridis_DSM_43017 1 1

Pseudonocardia_dioxanivorans_CB1190 1 1

Saccharopolyspora_erythraea_NRRL_2338 3 3

Amycolatopsis_mediterranei_U32 4 3

Kribbella_flavida_DSM_17836 2 2

Microlunatus_phosphovorus_NM-1 1 1

Salinispora_arenicola_CNS-205 1 1

Verrucosispora_maris_AB-18-032 2 2

Micromonospora_sp._L5 2 2

Micromonospora_aurantiaca_ATCC_27029 2 2

Actinoplanes_sp._N902-109 2 2

Actinoplanes_sp._SE50/110 2 2

Actinoplanes_missouriensis_431 2 2

Segniliparus_rotundus_DSM_44985 1 1

Tsukamurella_paurometabola_DSM_20162 1 1

Rhodococcus_jostii_RHA1 4 4

Rhodococcus_equi_103S 1 1

Rhodococcus_opacus_B4 3 3

Rhodococcus_erythropolis_PR4 2 2

Nocardia_cyriacigeorgica_GUH-2 3 3

Nocardia_farcinica_IFM_10152 1 1

Amycolicicoccus_subflavus_DQS3-9A1 1 1

Mycobacterium_abscessus_ATCC_19977 1 1

Mycobacterium_sp._JLS 1 1

Mycobacterium_avium_104 2 2

Mycobacterium_vanbaalenii_PYR-1 1 1

Mycobacterium_canettii_CIPT_140010059 1 1

Mycobacterium_africanum_GM041182 1 1

Mycobacterium_tuberculosis_KZN_1435 1 1

Mycobacterium_tuberculosis 1 1

Mycobacterium_bovis_BCG_str._Pasteur_1173P2 1 1

Mycobacterium_rhodesiae_NBB3 1 1

Mycobacterium_ulcerans_Agy99 1 1

Mycobacterium_gilvum_PYR-GCK 1 1

Mycobacterium_chubuense_NBB4 1 1

Mycobacterium_marinum_M 2 2

Mycobacterium_smegmatis_str._MC2_155 1 1

Corynebacterium_ulcerans_0102 1 1

Corynebacterium_variabile_DSM_44702 1 1

Corynebacterium_diphtheriae_NCTC_13129 1 1

Sanguibacter_keddieii_DSM_10542 1 1

Beutenbergia_cavernae_DSM_12333 1 1

Jonesia_denitrificans_DSM_20603 1 1

Brachybacterium_faecium_DSM_4810 1 1

Cellulomonas_flavigena_DSM_20109 1 1

Renibacterium_salmoninarum_ATCC_33209 1 1

Micrococcus_luteus_NCTC_2665 1 1

Anaerolinea_thermophila_UNI-1 1 1

Herpetosiphon_aurantiacus_DSM_785 3 3

Roseiflexus_sp._RS-1 2 2

Roseiflexus_castenholzii_DSM_13941 1 1

Chloroflexus_sp._Y-400-fl 1 1

Chloroflexus_aurantiacus_J-10-fl 1 1

Deinococcus_gobiensis_I-0 2 2

Deinococcus_deserti_VCD115 1 1

Deinococcus_maricopensis_DSM_21211 1 1

Deinococcus_proteolyticus_MRP 1 1

Deinococcus_radiodurans_R1 2 2

Megasphaera_elsdenii_DSM_20460 1 1

Selenomonas_ruminantium_subsp._lactilytica_TAM6421 2 2

Erysipelothrix_rhusiopathiae_str._Fujisawa 1 1

Clostridium_clariflavum_DSM_19732 1 1

Eubacterium_siraeum 1 1

Clostridium_thermocellum_ATCC_27405 1 1

Ruminococcus_sp. 1 1

Ruminococcus_bromii 1 1

Ruminococcus_albus_7 1 1

Desulfosporosinus_orientis_DSM_765 1 1

Syntrophobotulus_glycolicus_DSM_8271 1 1

Desulfotomaculum_acetoxidans_DSM_771 1 1

Eubacterium_eligens_ATCC_27750 1 1

[Ruminococcus]_obeum 1 1

[Ruminococcus]_torques 1 1

Eubacterium_rectale_M104/1 2 2

Eubacterium_rectale_ATCC_33656 2 2

Coprococcus_sp._ART55/1 1 1

Butyrivibrio_proteoclasticus_B316 4 4

Candidatus_Arthromitus_sp._SFB-mouse-Japan 4 4

Clostridium_beijerinckii_NCIMB_8052 1 1

Clostridium_perfringens_ATCC_13124 1 1

Clostridium_cellulovorans_743B 1 1

Clostridium_acetobutylicum_ATCC_824 1 1

Caldicellulosiruptor_obsidiansis_OB47 1 1

Caldicellulosiruptor_lactoaceticus_6A 1 1

Caldicellulosiruptor_kristjanssonii_177R1B 1 1

Caldicellulosiruptor_saccharolyticus_DSM_8903 1 1

Moorella_thermoacetica_ATCC_39073 1 1

Thermoanaerobacter_mathranii_subsp._mathranii_str._A3 1 1

Thermoanaerobacter_italicus_Ab9 1 1

Halanaerobium_hydrogeniformans 1 1

Carnobacterium_sp._17-4 1 1

Tetragenococcus_halophilus_NBRC_12172 1 1

Lactobacillus_casei_ATCC_334 1 1

Lactobacillus_kefiranofaciens_ZW3 1 1

Lactobacillus_crispatus_ST1 1 1

Lactobacillus_rhamnosus_Lc_705 1 1

Lactobacillus_amylovorus_GRL1118 1 1

Lactobacillus_gasseri_ATCC_33323 2 2

Lactobacillus_buchneri_NRRL_B-30929 1 1

Lactobacillus_buchneri 1 1

Lactobacillus_brevis_ATCC_367 1 1

Lactobacillus_acidophilus_30SC 1 1

Streptococcus_equi_subsp._equi_4047 1 1

Streptococcus_mitis_B6 2 2

Streptococcus_pyogenes_str._Manfredo 1 1

Streptococcus_sanguinis_SK36 1 1

Exiguobacterium_sp._AT1b 1 1

Kyrpidia_tusciae_DSM_2912 1 1

Brevibacillus_brevis_NBRC_100599 3 3

Paenibacillus_sp._JDR-2 1 1

Paenibacillus_terrae_HPL-003 1 1

Paenibacillus_mucilaginosus_3016 2 2

Paenibacillus_polymyxa_M1 2 2

Bacillus_selenitireducens_MLS10 1 1

Geobacillus_sp._WCH70 2 2

Geobacillus_thermodenitrificans_NG80-2 1 1

Bacillus_halodurans_C-125 1 1

Bacillus_weihenstephanensis_KBAB4 2 2

Bacillus_thuringiensis_str._Al_Hakam 2 2

Bacillus_cereus_03BB102 4 4

Bacillus_anthracis_str._A0248 3 3

Bacillus_cellulosilyticus_DSM_2522 1 1

Chlorobium_phaeobacteroides_DSM_266 1 1

Saprospira_grandis_str._Lewin 3 3

Niastella_koreensis_GR20-10 1 1

Chitinophaga_pinensis_DSM_2588 3 3

Flexibacter_litoralis_DSM_6794 3 3

Cyclobacterium_marinum_DSM_745 1 1

Fibrella_aestuarina 2 2

Cytophaga_hutchinsonii_ATCC_33406 1 1

Spirosoma_linguale_DSM_74 3 3

Runella_slithyformis_DSM_19594 2 2

Odoribacter_splanchnicus_DSM_20712 1 1

Solitalea_canadensis_DSM_3403 1 1

Aequorivita_sublithincola_DSM_14238 1 1

Flavobacterium_branchiophilum_FL-15 2 2

Flavobacterium_columnare_ATCC_49512 1 1

Flavobacterium_johnsoniae_UW101 1 1

Waddlia_chondrophila_WSU_86-1044 1 1

Candidatus_Protochlamydia_amoebophila_UWE25 1 1

Parachlamydia_acanthamoebae_UV-7 2 2

Planctomyces_brasiliensis_DSM_5305 1 1

Rhodopirellula_baltica_SH_1 3 3

Turneriella_parva_DSM_21527 2 2

Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._L550 2 2

Leptospira_interrogans_serovar_Lai_str._IPAV 1 1

Brachyspira_murdochii_DSM_12563 1 1

Brachyspira_intermedia_PWS/A 1 1

Brachyspira_hyodysenteriae_WA1 1 1

Sphaerochaeta_pleomorpha_str._Grapes 1 1

Thermodesulfatator_indicus_DSM_15286 1 1

Thermodesulfobacterium_sp._OPB45 1 1

Kosmotoga_olearia_TBF_19.5.1 1 1

Granulicella_tundricola_MP5ACTX9 1 1

Candidatus_Koribacter_versatilis_Ellin345 1 1

Terriglobus_saanensis_SP1PR4 1 1

Sebaldella_termitidis_ATCC_33386 1 1

Leptotrichia_buccalis_C-1013-b 1 1

Fusobacterium_nucleatum_subsp._nucleatum_ATCC_25586 1 1

Acidithiobacillus_ferrivorans_SS3 1 1

Desulfarculus_baarsii_DSM_2075 1 1

Desulfobacca_acetoxidans_DSM_11109 1 1

Syntrophobacter_fumaroxidans_MPOB 1 1

Desulfatibacillum_alkenivorans_AK-01 1 1

Desulfococcus_oleovorans_Hxd3 1 1

Geobacter_sulfurreducens_KN400 1 1

Haliangium_ochraceum_DSM_14365 1 1

Sorangium_cellulosum_'So_ce_56' 1 1

Stigmatella_aurantiaca_DW4/3-1 1 1

Myxococcus_xanthus_DK_1622 1 1

Myxococcus_fulvus_HW-1 1 1

Dechloromonas_aromatica_RCB 2 2

Dechlorosoma_suillum_PS 1 1

Chromobacterium_violaceum_ATCC_12472 6 6

Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 1 1

Leptothrix_cholodnii_SP-6 1 1

Burkholderia_phytofirmans_PsJN 1 1

Burkholderia_xenovorans_LB400 5 5

Ralstonia_solanacearum_CFBP2957 2 2

Burkholderia_cenocepacia_HI2424 1 1

Delftia_sp._Cs1-4 2 2

Delftia_acidovorans_SPH-1 1 1

Variovorax_paradoxus_S110 1 1

Acidovorax_sp._JS42 1 1

Acidovorax_citrulli_AAC00-1 3 3

Comamonas_testosteroni_CNB-2 1 1

Bordetella_avium_197N 3 2

Bordetella_pertussis_Tohama_I 1 1

Bordetella_parapertussis_12822 1 1

Bordetella_bronchiseptica_RB50 1 1

Achromobacter_xylosoxidans_A8 1 1

Nitrosomonas_eutropha_C91 1 1

Asticcacaulis_excentricus_CB_48 1 1

Brevundimonas_subvibrioides_ATCC_15264 1 1

Caulobacter_sp._K31 1 1

Caulobacter_crescentus_NA1000 1 1

Caulobacter_segnis_ATCC_21756 1 1

Phenylobacterium_zucineum_HLK1 2 2

Sphingopyxis_alaskensis_RB2256 1 1

Novosphingobium_sp._PP1Y 1 1

Novosphingobium_aromaticivorans_DSM_12444 1 1

Sphingobium_sp._SYK-6 1 1

Sphingobium_japonicum_UT26S 1 1

Sphingobium_chlorophenolicum_L-1 1 1

Sphingomonas_wittichii_RW1 1 1

Maricaulis_maris_MCS10 1 1

Hirschia_baltica_ATCC_49814 1 1

Hyphomonas_neptunium_ATCC_15444 1 1

Dinoroseobacter_shibae_DFL_12 1 1

Phaeobacter_gallaeciensis_2.10 1 1

Pseudovibrio_sp._FO-BEG1 2 2

Jannaschia_sp._CCS1 1 1

Ruegeria_sp._TM1040 1 1

Ruegeria_pomeroyi_DSS-3 1 1

Ketogulonigenium_vulgarum_WSH-001 1 1

Roseobacter_litoralis_Och_149 1 1

Roseobacter_denitrificans_OCh_114 1 1

Rhodobacter_sphaeroides_ATCC_17029 1 1

Rhodobacter_capsulatus_SB_1003 1 1

Paracoccus_denitrificans_PD1222 1 1

Tistrella_mobilis_KA081020-065 2 2

Rhodospirillum_centenum_SW 1 1

Rhodospirillum_rubrum_F11 1 1

Azospirillum_lipoferum_4B 1 1

Azospirillum_sp._B510 1 1

Azospirillum_brasilense_Sp245 1 1

Gluconacetobacter_xylinus_NBRC_3288 2 2

Granulibacter_bethesdensis_CGDNIH1 1 1

Polymorphum_gilvum_SL003B-26A1 1 1

Candidatus_Puniceispirillum_marinum_IMCC1322 1 1

Rickettsia_felis_URRWXCal2 1 1

Starkeya_novella_DSM_506 1 1

Xanthobacter_autotrophicus_Py2 2 2

Azorhizobium_caulinodans_ORS_571 1 1

Methylobacterium_chloromethanicum_CM4 1 1

Methylobacterium_extorquens_AM1 2 2

Methylobacterium_sp._4-46 2 2

Methylobacterium_populi_BJ001 1 1

Methylobacterium_nodulans_ORS_2060 2 2

Methylobacterium_radiotolerans_JCM_2831 1 1

Parvibaculum_lavamentivorans_DS-1 1 1

Ochrobactrum_anthropi_ATCC_49188 1 1

Brucella_microti_CCM_4915 1 1

Brucella_pinnipedialis_B2/94 1 1

Brucella_canis_ATCC_23365 1 1

Brucella_suis_ATCC_23445 1 1

Brucella_melitensis_ATCC_23457 1 1

Brucella_ovis_ATCC_25840 1 1

Brucella_abortus_S19 1 1

Sinorhizobium_fredii_NGR234 1 1

Sinorhizobium_medicae_WSM419 2 2

Sinorhizobium_meliloti_AK83 1 1

Genome_sequence_of_Rhizobium_sp._strain_IRBG74 1 1

Rhizobium_etli_CIAT_652 2 2

Rhizobium_leguminosarum_bv._viciae_3841 3 3

Agrobacterium_tumefaciens_str._C58 2 2

Agrobacterium_radiobacter_K84 2 2

Agrobacterium_sp._H13-3 1 1

Agrobacterium_vitis_S4 1 1

Mesorhizobium_sp._BNC1 1 1

Mesorhizobium_opportunistum_WSM2075 1 1

Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 1 1

Mesorhizobium_loti_MAFF303099 1 1

Methylocella_silvestris_BL2 1 1

Beijerinckia_indica_subsp._indica_ATCC_9039 1 1

Pelagibacterium_halotolerans_B2 1 1

Rhodomicrobium_vannielii_ATCC_17100 1 1

Hyphomicrobium_sp._MC1 1 1

Hyphomicrobium_denitrificans_ATCC_51888 1 1

Oligotropha_carboxidovorans_OM4 1 1

Rhodopseudomonas_palustris_BisA53 1 1

Nitrobacter_winogradskyi_Nb-255 1 1

Nitrobacter_hamburgensis_X14 1 1

Bradyrhizobium_japonicum_USDA_110 1 1

Bradyrhizobium_sp._ORS_278 1 1

Methylocystis_sp._SC2 1 1

Aeromonas_salmonicida_subsp._salmonicida_A449 1 1

Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 1 1

Aliivibrio_salmonicida_LFI1238 2 2

Vibrio_fischeri_MJ11 1 1

Vibrio_harveyi_ATCC_BAA-1116 4 4

Vibrio_parahaemolyticus_RIMD_2210633 2 2

Vibrio_anguillarum_775 1 1

Vibrio_cholerae_O395 2 2

Ferrimonas_balearica_DSM_9799 1 1

Shewanella_halifaxensis_HAW-EB4 1 1

Shewanella_baltica_OS185 1 1

Alteromonas_sp._SN2 1 1

Hahella_chejuensis_KCTC_2396 1 1

Marinomonas_mediterranea_MMB-1 1 1

Halomonas_elongata_DSM_2581 2 2

Frateuria_aurantia_DSM_6220 1 1

Xanthomonas_axonopodis_pv._citri_str._306 2 2

Allochromatium_vinosum_DSM_180 1 1

Legionella_pneumophila_str._Corby 2 2

Photorhabdus_asymbiotica 2 2

Photorhabdus_luminescens_subsp._laumondii_TTO1 3 3

Xenorhabdus_bovienii_SS-2004 2 2

Xenorhabdus_nematophila_ATCC_19061 3 3

Rahnella_sp._Y9602 1 1

Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 1 1

Yersinia_enterocolitica_subsp._enterocolitica_8081 2 2

Serratia_proteamaculans_568 1 1

Pectobacterium_wasabiae_WPP163 1 1

Pectobacterium_sp._SCC3193 2 2

Pectobacterium_atrosepticum_SCRI1043 2 2

Pectobacterium_carotovorum_subsp._carotovorum_PC1 2 2

Erwinia_tasmaniensis_Et1/99 5 5

Erwinia_sp._Ejp617 1 1

Erwinia_pyrifoliae_Ep1/96 3 3

Erwinia_amylovora_ATCC_49946 3 3

Cronobacter_sakazakii_ES15 1 1

Candidatus_Hamiltonella_defensa_5AT_(Acyrthosiphon_pisum) 2 2

Shigella_flexneri_5_str._8401 1 1

Shigella_boydii_CDC_3083-94 1 1

Salmonella_bongori_NCTC_12419 3 3

Salmonella_enterica_subsp._enterica_serovar_Paratyphi_C_strain_RKS4594 1 1

Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 1 1

Enterobacter_sp._R4-368 2 2

Citrobacter_rodentium_ICC168 2 2

Pseudomonas_sp._UW4 1 1

Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 1 1

Pseudomonas_entomophila_L48 2 2

Pseudomonas_syringae_pv._tomato_str._DC3000 11 11

Pseudomonas_fulva_12-X 1 1

Pseudomonas_putida_F1 8 8

Pseudomonas_protegens_Pf-5 2 2

Pseudomonas_fluorescens_SBW25 1 1

Pseudomonas_aeruginosa_UCBPP-PA14 3 3

Pseudomonas_sp._VLB120 7 7

Pyrolobus_fumarii_1A 1 1

Hyperthermus_butylicus_DSM_5456 1 1

Ignisphaera_aggregans_DSM_17230 1 1

Aeropyrum_pernix_K1 1 1

Ignicoccus_hospitalis_KIN4/I 1 1

Staphylothermus_hellenicus_DSM_12710 1 1

Staphylothermus_marinus_F1 1 1

Thermofilum_sp._1910b 1 1

Vulcanisaeta_distributa_DSM_14429 1 1

Pyrobaculum_sp._1860 1 1

Pyrobaculum_calidifontis_JCM_11548 1 1

Pyrobaculum_arsenaticum_DSM_13514 1 1

Pyrobaculum_oguniense_TE7 1 1

Thermoproteus_neutrophilus_V24Sta 1 1

Pyrobaculum_aerophilum_str._IM2 1 1

Pyrobaculum_islandicum_DSM_4184 1 1

Methanocella_arvoryzae_MRE50 3 3

Methanocella_conradii_HZ254 1 1

Methanocella_paludicola_SANAE 1 1

Methanosaeta_harundinacea_6Ac 1 1

Methanosaeta_thermophila_PT 1 1

Methanosaeta_concilii_GP6 1 1

Methanosalsum_zhilinae_DSM_4017 1 1

Methanohalobium_evestigatum_Z-7303 1 1

Methanococcoides_burtonii_DSM_6242 1 1

Methanosarcina_acetivorans_C2A 1 1

Methanosarcina_mazei_Go1 1 1

Methanosarcina_barkeri_str._Fusaro 1 1

Methanohalophilus_mahii_DSM_5219 1 1

Methanospirillum_hungatei_JF-1 2 2

Methanopyrus_kandleri_AV19 1 1

Ferroglobus_placidus_DSM_10642 2 2

Archaeoglobus_profundus_DSM_5631 2 2

Archaeoglobus_veneficus_SNP6 2 2

Archaeoglobus_fulgidus_DSM_4304 2 2

Thermococcus_sp._4557 1 1

Thermococcus_onnurineus_NA1 1 1

Thermococcus_kodakarensis_KOD1 1 1

Thermococcus_gammatolerans_EJ3 1 1

Thermococcus_barophilus_MP 1 1

Pyrococcus_sp._ST04 1 1

Pyrococcus_yayanosii_CH1 1 1

Pyrococcus_horikoshii_OT3 1 1

Pyrococcus_abyssi_GE5 1 1

Pyrococcus_furiosus_COM1 1 1

Thermoplasmatales_archaeon_BRNA1 2 2

Thermoplasma_volcanium_GSS1 1 1

Thermoplasma_acidophilum_DSM_1728 1 1

Salinarchaeum_sp._Harcht-Bsk1 1 1

Halopiger_xanaduensis_SH-6 1 1

Haloterrigena_turkmenica_DSM_5511 1 1

Haloarcula_hispanica_ATCC_33960 1 1

Haloarcula_marismortui_ATCC_43049 1 1

Halalkalicoccus_jeotgali_B3 1 1

Methanocaldococcus_jannaschii_DSM_2661 1 1

Methanobrevibacter_sp._AbM4 1 1

Methanobrevibacter_smithii_ATCC_35061 1 1

Aciduliprofundum_sp._MAR08-339 1 1

Aciduliprofundum_boonei_T469 1 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Longest transcript per gene
Genome Number Proteins

Homo_sapiens_69_37 (Human) 24 24

Pan_troglodytes_69_2.1.4 (Chimpanzee) 22 22

Gorilla_gorilla_69_3.1 (Western gorilla) 24 24

Pongo_abelii_69_2 (Sumatran orangutan) 21 21

Nomascus_leucogenys_69_1.0 (Northern white-cheeked gibbon) 20 20

Macaca_mulatta_69_1 (Rhesus monkey) 21 21

Callithrix_jacchus_69_3.2.1 (White-tufted-ear marmoset) 24 24

Otolemur_garnettii_69_3 (Small-eared galago) 23 23

Microcebus_murinus_69_1 (Gray mouse lemur) 21 19

Rattus_norvegicus_69_3.4 (Norway rat) 22 22

Mus_musculus_69_38 (House mouse) 25 25

Dipodomys_ordii_69_1 (Ord's kangaroo rat) 18 17

Ictidomys_tridecemlineatus_69_2 (Thirteen-lined ground squirrel) 23 23

Cavia_porcellus_69_3 (Domestic guinea pig) 26 26

Oryctolagus_cuniculus_69_2 (Rabbit) 27 27

Ochotona_princeps_69 (American pika) 24 22

Tupaia_belangeri_69 (Northern tree shrew) 18 18

Sus_scrofa_69_10.2 (Pig) 27 27

Bos_taurus_69_3.1 (Cattle) 25 25

Vicugna_pacos_69_1 (Alpaca) 15 14

Tursiops_truncatus_69_1 (Bottlenose dolphin) 20 20

Mustela_putorius_furo_69_1.0 (Domestic ferret) 23 23

Ailuropoda_melanoleuca_69_1 (Giant panda) 21 21

Canis_familiaris_69_3.1 (Dog) 23 23

Felis_catus_69 (Domestic cat) 16 16

Equus_caballus_69_2 (Horse) 25 25

Myotis_lucifugus_69_2.0 (Little brown bat) 32 32

Pteropus_vampyrus_69_1 (Large flying fox) 23 23

Sorex_araneus_69_1 (European shrew) 17 17

Erinaceus_europaeus_69 (Western European hedgehog) 19 19

Procavia_capensis_69_1 (Cape rock hyrax) 21 20

Loxodonta_africana_69_3 (African savanna elephant) 23 23

Echinops_telfairi_69 (Small Madagascar hedgehog) 17 17

Dasypus_novemcinctus_69_2 (Nine-banded armadillo) 18 17

Choloepus_hoffmanni_69_1 (Hoffmann's two-fingered sloth) 16 15

Macropus_eugenii_69_1.0 (Tammar wallaby) 20 18

Sarcophilus_harrisii_69_7.0 (Tasmanian devil) 22 22

Monodelphis_domestica_69_5 (Gray short-tailed opossum) 27 26

Ornithorhynchus_anatinus_69_5 (Platypus) 23 23

Petromyzon_marinus_69_7.0 (Sea lamprey) 21 19

Meleagris_gallopavo_69_2 (Turkey) 23 23

Gallus_gallus_69_2 (Chicken) 25 25

Taeniopygia_guttata_69_3.2.4 (Zebra finch) 17 17

Pelodiscus_sinensis_69_1.0 (Chinese soft-shelled turtle) 29 29

Anolis_carolinensis_69_2.0 (Green anole) 28 28

Xenopus_tropicalis_69_4.2 (Tropical clawed frog) 33 32

Latimeria_chalumnae_69_1 (Coelacanth) 36 34

Gadus_morhua_69_1 (Atlantic cod) 40 40

Tetraodon_nigroviridis_69_8 (Spotted green pufferfish) 21 21

Takifugu_rubripes_69_4 (Torafugu) 24 24

Gasterosteus_aculeatus_69_1 (Three-spined stickleback) 25 25

Oryzias_latipes_69_1 (Japanese medaka) 27 27

Xiphophorus_maculatus_69_4.4.2 (Southern platyfish) 39 39

Oreochromis_niloticus_69_1.0 (Nile tilapia) 35 33

Danio_rerio_69_9 (Zebrafish) 48 45

Ciona_savignyi_69_2.0 (Pacific transparent sea squirt) 18 18

Ciona_intestinalis_69 (Vase tunicate) 17 17

Drosophila_melanogaster_69_5 (Fruit fly) 3 3

Caenorhabditis_elegans_69_215 (Roundworm) 3 3

Saccharomyces_cerevisiae_69_4 (Baker's yeast) 1 1

Arabidopsis_thaliana_10 (Thale cress) 20 20

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Others
Genome Number Proteins

Homo_sapiens_75_37_(old_version_GRC) (Human) 84 84

Homo_sapiens__(NCBI_version) (Human) 43 43

Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate) (House mouse) 25 25

Heliconius_numata__(Incomplete) 1 1

Loa_loa_v3.3_(Request) (Eye worm) 3 3

Wuchereria_bancrofti_v1.0_(Request) (Agent of lymphatic filariasis) 4 4

Brugia_malayi_v1.0_(Duplicate) (Agent of lymphatic filariasis) 3 3

Moniliophthora_perniciosa_FA553__(Genome_survey) 10 10

Lotus_japonicus__(Early_assembly) 33 32

Malus_x_domestica_(Duplicate) (Apple) 38 37

Ricinus_communis__(Early_assembly) (Castor bean) 20 20

Nicotiana_benthamiana_0.4.4_(Early_draft) 34 34

Solanum_pimpinellifolium_A-1.0_(Early_draft) (Currant tomato) 22 22

Solanum_lycopersicum_v2.3_(Early_assembly) (Tomato) 24 24

Phoenix_dactylifera__(Early_draft) (Date palm) 14 14

Mycobacterium_tuberculosis_H37Rv_(Duplicate_of_ex) 1 1

Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 4 4

NCBI_plasmid_sequences_(Plasmids) 119 112

NCBI_2017_08_genome 84218 83520

Protozoadb_2010_08_(Protozoadb) 101 97

UniProt__viral_sequences_(Viral) 107 107

TargetDB__(Targets) 111 111

NCBI_viral_sequences_(Viral) 169 169

PDB_chains_(SCOP_1.75)_(PDB) 57 54

Protein_Data_Bank_(all_PDB_sequenc) 1059 1026

SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 1723 1723

STRING_v9.0.5_(STRING) 1885 1867

Uniprot_2018_03_genome 30979 30491

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Domain combinations for ADP-ribosylation superfamily in groups of genomes