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Domain combinations for Porins superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Porins domain in that genome.

Complete genomes
Genome Number Proteins

Homo_sapiens_76_38 (Human) 1 1

Pan_troglodytes_76_2.1.4 (Chimpanzee) 1 1

Gorilla_gorilla_76_3.1 (Western gorilla) 1 1

Pongo_abelii_76_2 (Sumatran orangutan) 1 1

Nomascus_leucogenys_76_1.0 (Northern white-cheeked gibbon) 1 1

Papio_anubis_76 (Olive baboon) 1 1

Macaca_mulatta_76_1 (Rhesus monkey) 1 1

Callithrix_jacchus_76_3.2.1 (White-tufted-ear marmoset) 2 2

Otolemur_garnettii_76_3 (Small-eared galago) 1 1

Microcebus_murinus_76_1 (Gray mouse lemur) 1 1

Rattus_norvegicus_76_5.0 (Norway rat) 1 1

Mus_musculus_76_38 (House mouse) 1 1

Dipodomys_ordii_76_1 (Ord's kangaroo rat) 1 1

Ictidomys_tridecemlineatus_76_2 (Thirteen-lined ground squirrel) 1 1

Heterocephalus_glaber_v1.7-2 (Naked mole-rat) 1 1

Cavia_porcellus_76_3 (Domestic guinea pig) 1 1

Sus_scrofa_76_10.2 (Pig) 1 1

Bos_taurus_76_3.1 (Cattle) 1 1

Ovis_aries_76_3.1 (Sheep) 1 1

Mustela_putorius_furo_76_1.0 (Domestic ferret) 1 1

Ailuropoda_melanoleuca_76_1 (Giant panda) 1 1

Canis_familiaris_76_3.1 (Dog) 2 2

Felis_catus_76_6.2 (Domestic cat) 1 1

Equus_caballus_76_2 (Horse) 2 2

Myotis_lucifugus_76_2.0 (Little brown bat) 1 1

Pteropus_vampyrus_76_1 (Large flying fox) 1 1

Procavia_capensis_76_1 (Cape rock hyrax) 1 1

Loxodonta_africana_76_3 (African savanna elephant) 1 1

Echinops_telfairi_76 (Small Madagascar hedgehog) 1 1

Strongylocentrotus_purpuratus_v3.1 (Purple sea urchin) 1 1

Lottia_gigantea_ (Owl limpet) 2 2

Capitella_sp._I_ 5 5

Rhodnius_prolixus_22 1 1

Daphnia_pulex_ (Common water flea) 2 2

Meloidogyne_incognita_ (Southern root-knot nematode) 1 1

Caenorhabditis_japonica_ 13 13

Caenorhabditis_remanei_ 9 9

Thelohanellus_kitauei 5 5

Nematostella_vectensis_1.0 (Starlet sea anemone) 12 11

Trichoplax_adhaerens_ 1 1

Proterospongia_sp._ATCC_50818_ 2 2

Monosiga_brevicollis_ 1 1

Sclerotinia_sclerotiorum_ 1 1

Aspergillus_niger_ATCC_1015_ 1 1

Entamoeba_dispar_1.2 3 2

Entamoeba_invadens_1.2 3 3

Entamoeba_histolytica_1 4 2

Phaseolus_vulgaris_v186 (French bean) 5 5

Glycine_max_v109 (Soybean) 4 4

Fragaria_vesca_ (Wild strawberry) 1 1

Manihot_esculenta_v147 (Cassava) 1 1

Vitis_vinifera_ (Wine grape) 1 1

Solanum_lycopersicum_v.2.3 (Tomato) 1 1

Actinidia_chinensis_Hongyang_ 1 1

Setaria_italica_v164 (Foxtail millet) 1 1

Chlorella_variabilis_sp._NC64A_ 1 1

Bathycoccus_prasinos_ 1 1

Bigelowiella_natans_CCMP2755_22 1 1

Trypanosoma_congolense_2.4 1 1

Pythium_irregulare_DAOM_BR486_22 1 1

Phytophthora_capsici_ 62 56

Hyaloperonospora_arabidopsidis_22 4 4

Fragilariopsis_cylindrus 2 2

Thalassiosira_pseudonana_CCMP1335 1 1

Plasmodium_yoelii_ssp._yoelii_1_ 1 1

Trichomonas_vaginalis_ 3 3

Leptolyngbya_sp._PCC_7376 8 8

Pseudanabaena_sp._PCC_7367 3 3

Acaryochloris_marina_MBIC11017 14 14

Synechocystis_sp._PCC_6803 5 5

Thermosynechococcus_elongatus_BP-1 1 1

Synechococcus_sp._PCC_6312 2 2

Synechococcus_sp._CC9311 2 2

Synechococcus_elongatus_PCC_7942 1 1

Prochlorococcus_marinus_str._MIT_9515 1 1

Microcoleus_sp._PCC_7113 7 6

Geitlerinema_sp._PCC_7407 7 6

Cyanothece_sp._PCC_8802 2 2

Gloeocapsa_sp._PCC_7428 33 33

Halothece_sp._PCC_7418 5 5

Gloeobacter_violaceus_PCC_7421 38 38

Rivularia_sp._PCC_7116 16 14

Calothrix_sp._PCC_7507 12 11

Anabaena_variabilis_ATCC_29413 14 14

'Nostoc_azollae'_0708 1 1

Nostoc_sp._PCC_7107 12 11

Nostoc_punctiforme_PCC_73102 4 3

Nostoc_sp._PCC_7120 31 30

Nostoc_sp._PCC_7524 18 17

Anabaena_sp._90 3 3

Deinococcus_radiodurans_R1 1 1

Meiothermus_silvanus_DSM_9946 1 1

Meiothermus_ruber_DSM_1279 2 1

Veillonella_parvula_DSM_2008 13 13

Megasphaera_elsdenii_DSM_20460 7 7

Acidaminococcus_intestini_RyC-MR95 12 12

Acidaminococcus_fermentans_DSM_20731 7 7

Megamonas_hypermegale 15 15

Selenomonas_sputigena_ATCC_35185 19 19

Selenomonas_ruminantium_subsp._lactilytica_TAM6421 13 13

Thermodesulfobium_narugense_DSM_14796 6 6

Acetohalobium_arabaticum_DSM_5501 8 7

Halothermothrix_orenii_H_168 2 2

Halanaerobium_hydrogeniformans 12 12

Halanaerobium_praevalens_DSM_2228 7 7

Lactobacillus_plantarum_JDM1 1 1

Candidatus_Cloacamonas_acidaminovorans 12 12

Gemmatimonas_aurantiaca_T-27 54 54

Melioribacter_roseus_P3M 53 53

Ignavibacterium_album_JCM_16511 53 53

Pelodictyon_phaeoclathratiforme_BU-1 9 9

Chlorobium_luteolum_DSM_273 9 9

Chlorobium_chlorochromatii_CaD3 6 6

Chlorobium_phaeobacteroides_DSM_266 10 10

Chlorobium_phaeovibrioides_DSM_265 8 8

Chlorobium_limicola_DSM_245 14 14

Chlorobaculum_parvum_NCIB_8327 8 8

Chlorobium_tepidum_TLS 12 12

Chloroherpeton_thalassium_ATCC_35110 39 39

Prosthecochloris_aestuarii_DSM_271 16 16

Haliscomenobacter_hydrossis_DSM_1100 115 114

Saprospira_grandis_str._Lewin 30 30

Niastella_koreensis_GR20-10 216 216

Chitinophaga_pinensis_DSM_2588 201 201

Salinibacter_ruber_M8 47 47

Rhodothermus_marinus_DSM_4252 58 57

Flexibacter_litoralis_DSM_6794 40 40

Candidatus_Amoebophilus_asiaticus_5a2 1 1

Candidatus_Cardinium_hertigii 1 1

Belliella_baltica_DSM_15883 42 42

Cyclobacterium_marinum_DSM_745 110 110

Marivirga_tractuosa_DSM_4126 50 50

Fibrella_aestuarina 116 116

Leadbetterella_byssophila_DSM_17132 81 80

Dyadobacter_fermentans_DSM_18053 165 165

Cytophaga_hutchinsonii_ATCC_33406 26 26

Spirosoma_linguale_DSM_74 143 143

Runella_slithyformis_DSM_19594 106 106

Parabacteroides_distasonis_ATCC_8503 113 113

Tannerella_forsythia_ATCC_43037 80 80

Paludibacter_propionicigenes_WB4 61 61

Odoribacter_splanchnicus_DSM_20712 101 101

Bacteroides_sp._CF50 43 43

Prevotella_melaninogenica_ATCC_25845 67 66

Prevotella_intermedia_17 39 39

Prevotella_denticola_F0289 65 64

Prevotella_ruminicola_23 74 74

Porphyromonas_asaccharolytica_DSM_20707 32 32

Porphyromonas_gingivalis_ATCC_33277 23 23

Alistipes_finegoldii_DSM_17242 61 61

Bacteroides_salanitronis_DSM_18170 59 59

Bacteroides_helcogenes_P_36-108 91 90

Bacteroides_vulgatus_ATCC_8482 133 133

Bacteroides_thetaiotaomicron_VPI-5482 152 152

Bacteroides_fragilis_YCH46 116 115

Pedobacter_saltans_DSM_12145 94 94

Solitalea_canadensis_DSM_3403 99 99

Pedobacter_heparinus_DSM_2366 140 140

Sphingobacterium_sp._21 170 170

Fluviicola_taffensis_DSM_16823 33 33

Owenweeksia_hongkongensis_DSM_17368 48 48

Zunongwangia_profunda_SM-A87 111 111

Krokinobacter_sp._4H-3-7-5 43 43

Gramella_forsetii_KT0803 54 54

Lacinutrix_sp._5H-3-7-4 39 39

Maribacter_sp._HTCC2170 54 54

Robiginitalea_biformata_HTCC2501 40 40

Croceibacter_atlanticus_HTCC2559 32 32

Aequorivita_sublithincola_DSM_14238 32 32

Zobellia_galactanivorans 128 128

Muricauda_ruestringensis_DSM_13258 63 63

Cellulophaga_algicola_DSM_14237 68 68

Cellulophaga_lytica_DSM_7489 76 76

Flavobacteriaceae_bacterium_3519-10 39 39

Polaribacter_sp._MED152 38 38

Riemerella_anatipestifer_ATCC_11845_=_DSM_15868 43 43

Ornithobacterium_rhinotracheale_DSM_15997 44 44

Capnocytophaga_canimorsus_Cc5 35 35

Capnocytophaga_ochracea_DSM_7271 43 43

Weeksella_virosa_DSM_16922 31 31

Flavobacterium_indicum_GPTSA100-9 35 35

Flavobacterium_psychrophilum_JIP02/86 38 38

Flavobacterium_branchiophilum_FL-15 40 40

Flavobacterium_columnare_ATCC_49512 33 33

Flavobacterium_johnsoniae_UW101 112 112

Blattabacterium_sp._(Blattella_germanica)_str._Bge 1 1

Fibrobacter_succinogenes_subsp._succinogenes_S85 15 15

Waddlia_chondrophila_WSU_86-1044 3 3

Parachlamydia_acanthamoebae_UV-7 1 1

Simkania_negevensis_Z 1 1

Phycisphaera_mikurensis_NBRC_102666 2 2

Isosphaera_pallida_ATCC_43644 1 1

Planctomyces_brasiliensis_DSM_5305 4 4

Planctomyces_limnophilus_DSM_3776 4 4

Rhodopirellula_baltica_SH_1 6 6

Pirellula_staleyi_DSM_6068 8 8

Methylacidiphilum_infernorum_V4 20 19

Coraliomargarita_akajimensis_DSM_45221 21 21

Opitutus_terrae_PB90-1 78 64

Akkermansia_muciniphila_ATCC_BAA-835 3 3

Fretibacterium_fastidiosum 2 2

Thermovirga_lienii_DSM_17291 3 3

Aminobacterium_colombiense_DSM_12261 4 4

Thermanaerovibrio_acidaminovorans_DSM_6589 2 2

Anaerobaculum_mobile_DSM_13181 3 3

Turneriella_parva_DSM_21527 11 11

Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._L550 8 8

Leptospira_interrogans_serovar_Lai_str._IPAV 14 14

Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 13 13

Brachyspira_murdochii_DSM_12563 2 2

Brachyspira_intermedia_PWS/A 2 2

Brachyspira_pilosicoli_95/1000 2 2

Brachyspira_hyodysenteriae_WA1 2 2

Spirochaeta_smaragdinae_DSM_11293 5 5

Sphaerochaeta_pleomorpha_str._Grapes 1 1

Sphaerochaeta_globus_str._Buddy 1 1

Spirochaeta_caldaria_DSM_7334 2 2

Treponema_azotonutricium_ZAS-9 3 3

Treponema_primitia_ZAS-2 6 6

Treponema_brennaborense_DSM_12168 1 1

Treponema_succinifaciens_DSM_2489 6 6

Spirochaeta_africana_DSM_8902 4 4

Thermodesulfatator_indicus_DSM_15286 7 7

Thermodesulfobacterium_sp._OPB45 9 9

Desulfurispirillum_indicum_S5 16 16

Calditerrivibrio_nitroreducens_DSM_19672 2 2

Denitrovibrio_acetiphilus_DSM_12809 12 12

Deferribacter_desulfuricans_SSM1 5 5

Flexistipes_sinusarabici_DSM_4947 2 2

Thermosipho_africanus_TCF52B 1 1

Thermotoga_sp._RQ2 1 1

Thermotoga_maritima_MSB8 1 1

Thermovibrio_ammonificans_HB-1 6 6

Desulfurobacterium_thermolithotrophum_DSM_11699 11 10

Sulfurihydrogenibium_sp._YO3AOP1 11 11

Sulfurihydrogenibium_azorense_Az-Fu1 11 11

Persephonella_marina_EX-H1 17 17

Hydrogenobaculum_sp._SN 6 6

Hydrogenobaculum_sp._HO 5 5

Hydrogenobaculum_sp._Y04AAS1 8 8

Thermocrinis_albus_DSM_14484 8 8

Aquifex_aeolicus_VF5 10 10

Hydrogenobacter_thermophilus_TK-6 11 11

Elusimicrobium_minutum_Pei191 2 2

Dictyoglomus_turgidum_DSM_6724 1 1

Dictyoglomus_thermophilum_H-6-12 4 4

Candidatus_Chloracidobacterium_thermophilum_B 27 27

Candidatus_Solibacter_usitatus_Ellin6076 180 180

Granulicella_tundricola_MP5ACTX9 78 77

Granulicella_mallensis_MP5ACTX8 140 139

Candidatus_Koribacter_versatilis_Ellin345 52 52

Terriglobus_saanensis_SP1PR4 104 104

Terriglobus_roseus_DSM_18391 91 91

Acidobacterium_capsulatum_ATCC_51196 53 53

Thermodesulfovibrio_yellowstonii_DSM_11347 4 4

Candidatus_Nitrospira_defluvii 30 30

Leptospirillum_ferrooxidans_C2-3 4 4

Sebaldella_termitidis_ATCC_33386 5 5

Leptotrichia_buccalis_C-1013-b 2 2

Ilyobacter_polytropus_DSM_2926 1 1

Fusobacterium_nucleatum_subsp._nucleatum_ATCC_25586 6 6

Candidatus_Methylomirabilis_oxyfera 18 18

Acidithiobacillus_ferrivorans_SS3 9 9

Acidithiobacillus_caldus_SM-1 17 17

Acidithiobacillus_ferrooxidans_ATCC_53993 20 20

Bacteriovorax_marinus_SJ 8 8

Bdellovibrio_bacteriovorus_HD100 12 12

Nautilia_profundicola_AmH 3 3

Nitratifractor_salsuginis_DSM_16511 4 4

Sulfurospirillum_deleyianum_DSM_6946 13 13

Sulfurospirillum_barnesii_SES-3 18 18

Arcobacter_sp._L 20 20

Arcobacter_nitrofigilis_DSM_7299 13 13

Arcobacter_butzleri_RM4018 23 23

Campylobacter_hominis_ATCC_BAA-381 2 2

Campylobacter_lari_RM2100 3 3

Campylobacter_curvus_525.92 25 25

Campylobacter_concisus_13826 5 5

Campylobacter_jejuni_subsp._doylei_269.97 5 5

Campylobacter_sp._03-427 11 11

Campylobacter_fetus_subsp._fetus_82-40 10 10

uncultured_Sulfuricurvum_sp._RIFRC-1 23 22

Sulfuricurvum_kujiense_DSM_16994 26 25

Sulfurimonas_autotrophica_DSM_16294 14 14

Sulfurimonas_denitrificans_DSM_1251 19 19

Wolinella_succinogenes_DSM_1740 17 17

Helicobacter_cetorum_MIT_00-7128 9 9

Helicobacter_bizzozeronii_CIII-1 6 6

Helicobacter_hepaticus_ATCC_51449 6 6

Helicobacter_mustelae_12198 9 9

Helicobacter_felis_ATCC_49179 3 3

Helicobacter_cinaedi_PAGU611 13 12

Helicobacter_acinonychis_str._Sheeba 7 7

Helicobacter_pylori_B38 6 6

Nitratiruptor_sp._SB155-2 12 12

Sulfurovum_sp._NBC37-1 11 11

Desulfarculus_baarsii_DSM_2075 25 25

Desulfobacca_acetoxidans_DSM_11109 22 22

Syntrophus_aciditrophicus_SB 6 6

Desulfomonile_tiedjei_DSM_6799 8 8

Syntrophobacter_fumaroxidans_MPOB 7 6

Desulfurivibrio_alkaliphilus_AHT2 12 11

Desulfotalea_psychrophila_LSv54 4 4

Desulfobulbus_propionicus_DSM_2032 14 14

Desulfatibacillum_alkenivorans_AK-01 18 18

Desulfobacterium_autotrophicum_HRM2 24 23

Desulfococcus_oleovorans_Hxd3 10 10

Desulfohalobium_retbaense_DSM_5692 5 5

Desulfomicrobium_baculatum_DSM_4028 7 7

Desulfovibrio_piezophilus 6 6

Desulfovibrio_aespoeensis_Aspo-2 4 4

Desulfovibrio_magneticus_RS-1 1 1

Desulfovibrio_alaskensis_G20 6 6

Desulfovibrio_vulgaris_subsp._vulgaris_DP4 9 9

Desulfovibrio_salexigens_DSM_2638 5 5

Desulfovibrio_desulfuricans_subsp._desulfuricans_str._ATCC_27774 5 5

Desulfovibrio_africanus_str._Walvis_Bay 5 5

Hippea_maritima_DSM_10411 3 3

Geobacter_daltonii_FRC-32 10 10

Geobacter_sp._M21 20 19

Geobacter_uraniireducens_Rf4 21 20

Geobacter_lovleyi_SZ 17 16

Geobacter_bemidjiensis_Bem 18 18

Geobacter_sulfurreducens_KN400 13 12

Geobacter_metallireducens_GS-15 17 17

Pelobacter_propionicus_DSM_2379 20 19

Pelobacter_carbinolicus_DSM_2380 20 20

Haliangium_ochraceum_DSM_14365 29 29

Sorangium_cellulosum_'So_ce_56' 36 36

Anaeromyxobacter_sp._Fw109-5 16 16

Anaeromyxobacter_dehalogenans_2CP-1 20 20

Stigmatella_aurantiaca_DW4/3-1 33 33

Corallococcus_coralloides_DSM_2259 29 29

Myxococcus_xanthus_DK_1622 25 25

Myxococcus_fulvus_HW-1 23 23

Dechloromonas_aromatica_RCB 27 27

Thauera_sp._MZ1T 20 20

Azoarcus_sp._KH32C 42 38

Azoarcus_sp._BH72 31 31

Aromatoleum_aromaticum_EbN1 18 18

Dechlorosoma_suillum_PS 22 22

Pseudogulbenkiania_sp._NH8B 15 15

Laribacter_hongkongensis_HLHK9 11 11

Chromobacterium_violaceum_ATCC_12472 22 22

Neisseria_meningitidis_alpha14 16 16

Neisseria_meningitidis_FAM18 17 17

Neisseria_lactamica_020-06 15 15

Neisseria_gonorrhoeae_NCCP11945 21 21

Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 14 14

beta_proteobacterium_CB 4 4

Methylibium_petroleiphilum_PM1 28 28

Thiomonas_arsenitoxydans 17 17

Thiomonas_intermedia_K12 12 12

Rubrivivax_gelatinosus_IL144 44 44

Leptothrix_cholodnii_SP-6 18 18

Burkholderia_rhizoxinica_HKI_454 13 13

Burkholderia_phytofirmans_PsJN 58 58

Burkholderia_phymatum_STM815 49 48

Burkholderia_xenovorans_LB400 103 103

Ralstonia_eutropha_JMP134 49 49

Cupriavidus_taiwanensis_LMG_19424 35 35

Cupriavidus_metallidurans_CH34 48 48

Cupriavidus_necator_N-1 73 73

Ralstonia_eutropha_H16 43 43

Ralstonia_pickettii_12D 28 28

Ralstonia_solanacearum_CFBP2957 26 26

Polynucleobacter_necessarius_subsp._asymbioticus_QLW-P1DMWA-1 4 4

Burkholderia_sp._RPE64 34 34

Burkholderia_sp._CCGE1002 31 31

Burkholderia_thailandensis_E264 37 37

Burkholderia_pseudomallei_1106a 43 43

Burkholderia_mallei_SAVP1 28 28

Burkholderia_ambifaria_AMMD 58 58

Burkholderia_cenocepacia_HI2424 73 73

Burkholderia_multivorans_ATCC_17616 58 58

Burkholderia_vietnamiensis_G4 44 44

Burkholderia_gladioli_BSR3 73 73

Burkholderia_glumae_BGR1 40 40

Verminephrobacter_eiseniae_EF01-2 16 16

Alicycliphilus_denitrificans_K601 17 17

Ramlibacter_tataouinensis_TTB310 11 11

Delftia_sp._Cs1-4 84 84

Delftia_acidovorans_SPH-1 64 64

Polaromonas_sp._JS666 15 15

Polaromonas_naphthalenivorans_CJ2 17 17

Variovorax_paradoxus_S110 29 29

Rhodoferax_ferrireducens_T118 14 13

Acidovorax_ebreus_TPSY 17 17

Acidovorax_sp._KKS102 16 16

Acidovorax_sp._JS42 16 16

Acidovorax_citrulli_AAC00-1 22 22

Acidovorax_avenae_subsp._avenae_ATCC_19860 34 34

Comamonas_testosteroni_CNB-2 48 48

Herminiimonas_arsenicoxydans 14 14

Collimonas_fungivorans_Ter331 49 49

Janthinobacterium_sp._Marseille 46 46

Herbaspirillum_seropedicae_SmR1 45 45

Pusillimonas_sp._T7-7 15 15

Advenella_kashmirensis_WT001 24 24

Taylorella_asinigenitalis_MCE3 5 5

Taylorella_equigenitalis_MCE9 12 11

Bordetella_petrii_DSM_12804 19 19

Bordetella_avium_197N 15 15

Bordetella_pertussis_Tohama_I 19 19

Bordetella_parapertussis_12822 19 19

Bordetella_bronchiseptica_RB50 26 26

Achromobacter_xylosoxidans_A8 61 61

Achromobacter_xylosoxidans 68 68

Thiobacillus_denitrificans_ATCC_25259 20 20

Nitrosospira_multiformis_ATCC_25196 19 19

Nitrosomonas_sp._Is79A3 17 17

Nitrosomonas_eutropha_C91 17 17

Nitrosomonas_europaea_ATCC_19718 38 38

Sideroxydans_lithotrophicus_ES-1 14 13

Gallionella_capsiferriformans_ES-2 10 9

Methylotenera_versatilis_301 25 25

Methylotenera_mobilis_JLW8 20 19

Methylovorus_sp._MP688 40 39

Methylovorus_glucosetrophus_SIP3-4 37 37

Methylobacillus_flagellatus_KT 36 35

Magnetococcus_marinus_MC-1 7 7

Parvularcula_bermudensis_HTCC2503 27 27

Asticcacaulis_excentricus_CB_48 84 84

Brevundimonas_subvibrioides_ATCC_15264 48 48

Caulobacter_sp._K31 108 108

Caulobacter_crescentus_NA1000 73 73

Caulobacter_segnis_ATCC_21756 109 109

Phenylobacterium_zucineum_HLK1 67 67

Erythrobacter_litoralis_HTCC2594 36 35

Sphingopyxis_alaskensis_RB2256 44 44

Novosphingobium_sp._PP1Y 113 113

Novosphingobium_aromaticivorans_DSM_12444 83 83

Sphingobium_sp._SYK-6 78 78

Sphingobium_japonicum_UT26S 80 80

Sphingobium_chlorophenolicum_L-1 102 102

Sphingomonas_sp._MM-1 71 71

Sphingomonas_wittichii_RW1 165 165

Zymomonas_mobilis_subsp._mobilis_NCIMB_11163 23 23

Maricaulis_maris_MCS10 33 33

Hirschia_baltica_ATCC_49814 59 59

Hyphomonas_neptunium_ATCC_15444 47 47

Dinoroseobacter_shibae_DFL_12 6 6

Phaeobacter_gallaeciensis_2.10 6 6

Pseudovibrio_sp._FO-BEG1 18 18

Jannaschia_sp._CCS1 7 7

Ruegeria_sp._TM1040 4 4

Ruegeria_pomeroyi_DSS-3 8 8

Ketogulonicigenium_vulgare_Y25 11 11

Ketogulonigenium_vulgarum_WSH-001 11 11

Roseobacter_litoralis_Och_149 6 6

Roseobacter_denitrificans_OCh_114 7 7

Rhodobacter_sphaeroides_ATCC_17029 13 13

Rhodobacter_capsulatus_SB_1003 15 15

Paracoccus_denitrificans_PD1222 31 30

Rhodospirillum_photometricum_DSM_122 9 9

Tistrella_mobilis_KA081020-065 35 35

Magnetospirillum_magneticum_AMB-1 5 5

Rhodospirillum_centenum_SW 46 46

Rhodospirillum_rubrum_F11 19 19

Azospirillum_lipoferum_4B 18 18

Azospirillum_sp._B510 15 15

Azospirillum_brasilense_Sp245 23 23

Gluconacetobacter_xylinus_NBRC_3288 23 23

Granulibacter_bethesdensis_CGDNIH1 9 9

Gluconacetobacter_diazotrophicus_PAl_5 30 30

Acidiphilium_multivorum_AIU301 9 9

Acidiphilium_cryptum_JF-5 9 9

Gluconobacter_oxydans_621H 37 37

Acetobacter_pasteurianus_IFO_3283-01 31 31

Polymorphum_gilvum_SL003B-26A1 8 8

Micavibrio_aeruginosavorus_ARL-13 4 4

Candidatus_Puniceispirillum_marinum_IMCC1322 2 2

alpha_proteobacterium_HIMB5 1 1

alpha_proteobacterium_HIMB59 1 1

Candidatus_Pelagibacter_sp._IMCC9063 1 1

Candidatus_Midichloria_mitochondrii_IricVA 2 2

Neorickettsia_sennetsu_str._Miyayama 1 1

Neorickettsia_risticii_str._Illinois 1 1

Wolbachia_endosymbiont_of_Culex_quinquefasciatus_Pel 2 2

Wolbachia_sp._wRi 2 2

Ehrlichia_chaffeensis_str._Arkansas 5 4

Ehrlichia_canis_str._Jake 4 4

Ehrlichia_ruminantium_str._Gardel 3 3

Anaplasma_phagocytophilum_HZ 2 2

Anaplasma_marginale_str._Florida 2 2

Anaplasma_centrale_str._Israel 2 2

Orientia_tsutsugamushi_str._Boryong 1 1

Rickettsia_bellii_OSU_85-389 2 2

Rickettsia_canadensis_str._McKiel 1 1

Rickettsia_typhi_str._Wilmington 1 1

Rickettsia_prowazekii_str._BuV67-CWPP 1 1

Rickettsia_philipii_str._364D 1 1

Rickettsia_heilongjiangensis_054 1 1

Rickettsia_peacockii_str._Rustic 2 2

Rickettsia_felis_URRWXCal2 1 1

Rickettsia_slovaca_13-B 1 1

Rickettsia_parkeri_str._Portsmouth 1 1

Rickettsia_massiliae_MTU5 1 1

Rickettsia_japonica_YH 2 2

Rickettsia_africae_ESF-5 2 2

Rickettsia_rhipicephali_str._3-7-female6-CWPP 1 1

Rickettsia_montanensis_str._OSU_85-930 1 1

Candidatus_Rickettsia_amblyommii_str._GAT-30V 1 1

Rickettsia_australis_str._Cutlack 2 2

Rickettsia_akari_str._Hartford 1 1

Rickettsia_rickettsii_str._'Sheila_Smith' 1 1

Rickettsia_conorii_str._Malish_7 1 1

Starkeya_novella_DSM_506 4 4

Xanthobacter_autotrophicus_Py2 7 7

Azorhizobium_caulinodans_ORS_571 15 15

Methylobacterium_chloromethanicum_CM4 30 30

Methylobacterium_extorquens_AM1 24 24

Methylobacterium_sp._4-46 14 14

Methylobacterium_populi_BJ001 29 29

Methylobacterium_nodulans_ORS_2060 19 19

Methylobacterium_radiotolerans_JCM_2831 26 26

Parvibaculum_lavamentivorans_DS-1 15 15

Ochrobactrum_anthropi_ATCC_49188 15 15

Brucella_microti_CCM_4915 6 6

Brucella_pinnipedialis_B2/94 5 5

Brucella_canis_ATCC_23365 5 5

Brucella_suis_ATCC_23445 5 5

Brucella_melitensis_ATCC_23457 6 6

Brucella_ovis_ATCC_25840 5 5

Brucella_abortus_S19 4 4

Sinorhizobium_fredii_NGR234 10 10

Sinorhizobium_medicae_WSM419 10 10

Sinorhizobium_meliloti_AK83 13 13

Genome_sequence_of_Rhizobium_sp._strain_IRBG74 12 12

Rhizobium_etli_CIAT_652 9 9

Rhizobium_leguminosarum_bv._viciae_3841 8 8

Agrobacterium_tumefaciens_str._C58 13 13

Agrobacterium_radiobacter_K84 18 18

Agrobacterium_sp._H13-3 13 13

Agrobacterium_vitis_S4 10 10

Candidatus_Liberibacter_asiaticus_str._psy62 1 1

Mesorhizobium_sp._BNC1 8 8

Mesorhizobium_opportunistum_WSM2075 7 7

Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 10 10

Mesorhizobium_loti_MAFF303099 8 8

Methylocella_silvestris_BL2 11 11

Beijerinckia_indica_subsp._indica_ATCC_9039 27 27

Rhodomicrobium_vannielii_ATCC_17100 16 16

Hyphomicrobium_sp._MC1 26 26

Hyphomicrobium_denitrificans_ATCC_51888 24 24

Oligotropha_carboxidovorans_OM4 15 15

Rhodopseudomonas_palustris_BisA53 11 11

Nitrobacter_winogradskyi_Nb-255 24 24

Nitrobacter_hamburgensis_X14 15 15

Bradyrhizobium_japonicum_USDA_110 16 16

Bradyrhizobium_sp._ORS_278 14 14

Methylocystis_sp._SC2 21 21

Bartonella_tribocorum_CIP_105476 2 2

Bartonella_clarridgeiae_73 1 1

Bartonella_henselae_str._Houston-1 3 3

Bartonella_grahamii_as4aup 2 2

Bartonella_quintana_str._Toulouse 2 2

Bartonella_bacilliformis_KC583 2 2

Saccharophagus_degradans_2-40 61 61

Teredinibacter_turnerae_T7901 43 43

Cellvibrio_japonicus_Ueda107 61 61

Aggregatibacter_aphrophilus_NJ8700 17 17

Aggregatibacter_actinomycetemcomitans_D7S-1 12 12

Haemophilus_somnus_129PT 10 10

Gallibacterium_anatis_UMN179 7 7

Pasteurella_multocida_subsp._multocida_str._3480 24 24

Haemophilus_parasuis_SH0165 6 6

Haemophilus_ducreyi_35000HP 6 6

Haemophilus_parainfluenzae_T3T1 13 13

Haemophilus_influenzae_PittEE 7 7

Actinobacillus_succinogenes_130Z 9 9

Actinobacillus_pleuropneumoniae_serovar_5b_str._L20 12 12

Oceanimonas_sp._GK1 12 12

Tolumonas_auensis_DSM_9187 8 8

Aeromonas_veronii_B565 18 18

Aeromonas_salmonicida_subsp._salmonicida_A449 20 20

Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 22 21

Aliivibrio_salmonicida_LFI1238 16 16

Vibrio_fischeri_MJ11 30 30

Vibrio_sp._Ex25 37 36

Vibrio_harveyi_ATCC_BAA-1116 36 36

Vibrio_parahaemolyticus_RIMD_2210633 34 34

Vibrio_splendidus_LGP32 28 28

Vibrio_anguillarum_775 18 18

Vibrio_furnissii_NCTC_11218 26 26

Vibrio_vulnificus_MO6-24/O 32 31

Vibrio_cholerae_O395 21 21

Photobacterium_profundum_SS9 28 27

Psychromonas_ingrahamii_37 6 6

Psychromonas_sp._CNPT3 7 7

Idiomarina_loihiensis_L2TR 38 38

Ferrimonas_balearica_DSM_9799 50 50

Shewanella_piezotolerans_WP3 68 67

Shewanella_loihica_PV-4 46 46

Shewanella_halifaxensis_HAW-EB4 46 45

Shewanella_sediminis_HAW-EB3 64 61

Shewanella_denitrificans_OS217 37 37

Shewanella_pealeana_ATCC_700345 54 53

Shewanella_oneidensis_MR-1 45 43

Shewanella_baltica_OS185 60 59

Shewanella_woodyi_ATCC_51908 71 71

Shewanella_sp._MR-4 56 55

Shewanella_amazonensis_SB2B 49 49

Shewanella_violacea_DSS12 54 54

Shewanella_frigidimarina_NCIMB_400 60 58

Shewanella_putrefaciens_CN-32 44 43

Colwellia_psychrerythraea_34H 70 70

Pseudoalteromonas_sp._SM9913 51 51

Pseudoalteromonas_atlantica_T6c 107 107

Pseudoalteromonas_haloplanktis_TAC125 53 53

Glaciecola_sp._4H-3-7+YE-5 99 99

Glaciecola_nitratireducens_FR1064 35 35

Marinobacter_adhaerens_HP15 27 27

Marinobacter_sp._BSs20148 9 9

Marinobacter_hydrocarbonoclasticus_ATCC_49840 21 21

Marinobacter_aquaeolei_VT8 18 18

Alteromonas_sp._SN2 73 73

Alteromonas_macleodii_str._'Deep_ecotype' 63 63

Kangiella_koreensis_DSM_16069 21 21

Hahella_chejuensis_KCTC_2396 25 25

Alcanivorax_borkumensis_SK2 19 19

Marinomonas_posidonica_IVIA-Po-181 16 16

Marinomonas_sp._MWYL1 24 24

Marinomonas_mediterranea_MMB-1 15 15

Chromohalobacter_salexigens_DSM_3043 16 16

Halomonas_elongata_DSM_2581 19 19

Methylomicrobium_alcaliphilum 15 15

Methylomonas_methanica_MC09 46 46

Methylococcus_capsulatus_str._Bath 12 12

Dichelobacter_nodosus_VCS1703A 2 2

Rhodanobacter_denitrificans 36 36

Frateuria_aurantia_DSM_6220 45 45

Pseudoxanthomonas_spadix_BD-a59 35 34

Pseudoxanthomonas_suwonensis_11-1 38 38

Stenotrophomonas_maltophilia_K279a 78 78

Xylella_fastidiosa_M23 15 15

Xanthomonas_axonopodis_pv._citri_str._306 85 84

Xanthomonas_albilineans_GPE_PC73 40 40

Xanthomonas_oryzae_pv._oryzae_PXO99A 63 62

Xanthomonas_campestris_pv._campestris_str._B100 83 82

Halothiobacillus_neapolitanus_c2 10 10

Spiribacter_sp._UAH-SP71 4 4

Alkalilimnicola_ehrlichii_MLHE-1 22 22

Thioalkalivibrio_sulfidophilus_HL-EbGr7 17 17

Thioalkalivibrio_sp._K90mix 10 10

Halorhodospira_halophila_SL1 19 18

Allochromatium_vinosum_DSM_180 17 17

Thiocystis_violascens_DSM_198 14 14

Nitrosococcus_watsonii_C-113 17 17

Nitrosococcus_halophilus_Nc4 25 23

Nitrosococcus_oceani_ATCC_19707 18 18

Coxiella_burnetii_Dugway_5J108-111 1 1

Legionella_longbeachae_NSW150 3 3

Legionella_pneumophila_str._Corby 2 2

gamma_proteobacterium_HdN1 35 35

Photorhabdus_asymbiotica 14 14

Photorhabdus_luminescens_subsp._laumondii_TTO1 16 16

Xenorhabdus_bovienii_SS-2004 15 15

Xenorhabdus_nematophila_ATCC_19061 17 17

Providencia_stuartii_MRSN_2154 21 21

Proteus_mirabilis_HI4320 21 21

Edwardsiella_ictaluri_93-146 13 13

Edwardsiella_tarda_EIB202 15 15

Rahnella_sp._Y9602 23 23

Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 23 23

Yersinia_pseudotuberculosis_IP_31758 20 20

Yersinia_pestis_Pestoides_F 20 20

Yersinia_enterocolitica_subsp._enterocolitica_8081 25 25

Serratia_sp._AS12 22 22

Serratia_symbiotica_str._'Cinara_cedri' 1 1

Serratia_sp._ATCC_39006 12 12

Serratia_plymuthica_AS9 22 22

Serratia_proteamaculans_568 24 24

Dickeya_dadantii_Ech703 16 16

Dickeya_zeae_Ech1591 16 16

Pectobacterium_wasabiae_WPP163 31 31

Pectobacterium_sp._SCC3193 34 34

Pectobacterium_atrosepticum_SCRI1043 29 29

Pectobacterium_carotovorum_subsp._carotovorum_PC1 30 30

Sodalis_glossinidius_str._'morsitans' 5 5

Halyomorpha_halys_symbiont 1 1

Pantoea_sp._At-9b 39 39

Pantoea_vagans_C9-1 21 21

Pantoea_ananatis_LMG_20103 22 22

Wigglesworthia_glossinidia_endosymbiont_of_Glossina_brevipalpis 1 1

Erwinia_tasmaniensis_Et1/99 15 15

Erwinia_sp._Ejp617 14 14

Erwinia_billingiae_Eb661 25 25

Erwinia_pyrifoliae_Ep1/96 12 12

Erwinia_amylovora_ATCC_49946 12 12

Escherichia_blattae_DSM_4481 18 18

Candidatus_Moranella_endobia_PCIT 1 1

Cronobacter_turicensis_z3032 20 20

Cronobacter_sakazakii_ES15 20 20

Candidatus_Riesia_pediculicola_USDA 1 1

secondary_endosymbiont_of_Ctenarytaina_eucalypti 1 1

Candidatus_Hamiltonella_defensa_5AT_(Acyrthosiphon_pisum) 2 2

Candidatus_Blochmannia_floridanus 2 2

Enterobacteriaceae_bacterium_strain_FGI_57 31 31

Shigella_sonnei_Ss046 19 19

Shigella_flexneri_5_str._8401 17 17

Shigella_dysenteriae_Sd197 15 15

Shigella_boydii_CDC_3083-94 17 17

Salmonella_bongori_NCTC_12419 18 18

Salmonella_enterica_subsp._enterica_serovar_Paratyphi_C_strain_RKS4594 19 19

Klebsiella_oxytoca_E718 41 41

Klebsiella_variicola_At-22 33 33

Klebsiella_pneumoniae_NTUH-K2044 35 35

Enterobacter_aerogenes_KCTC_2190 30 30

Escherichia_fergusonii_ATCC_35469 18 18

Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 18 18

Enterobacter_sp._R4-368 27 27

Enterobacter_sp._638 26 26

Enterobacter_asburiae_LF7a 32 32

Enterobacter_cloacae_subsp._dissolvens_SDM 25 25

Citrobacter_rodentium_ICC168 20 20

Citrobacter_koseri_ATCC_BAA-895 37 37

Azotobacter_vinelandii_DJ 53 53

Pseudomonas_sp._TKP 47 47

Pseudomonas_sp._UW4 26 26

Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 29 29

Pseudomonas_entomophila_L48 37 37

Pseudomonas_syringae_pv._tomato_str._DC3000 31 31

Pseudomonas_stutzeri_A1501 19 19

Pseudomonas_fulva_12-X 20 20

Pseudomonas_putida_F1 41 41

Pseudomonas_protegens_Pf-5 51 51

Pseudomonas_fluorescens_SBW25 51 51

Pseudomonas_mendocina_ymp 27 27

Pseudomonas_aeruginosa_UCBPP-PA14 45 45

Pseudomonas_sp._VLB120 28 27

Psychrobacter_sp._G 10 10

Psychrobacter_sp._PRwf-1 15 15

Psychrobacter_arcticus_273-4 5 5

Psychrobacter_cryohalolentis_K5 8 8

Moraxella_catarrhalis_RH4 11 11

Acinetobacter_oleivorans_DR1 43 42

Acinetobacter_calcoaceticus_PHEA-2 45 45

Acinetobacter_baumannii_ATCC_17978 42 42

Acinetobacter_sp._ADP1 44 44

Methylophaga_sp._JAM1 33 33

Cycloclasticus_sp._P1 16 16

Thiomicrospira_crunogena_XCL-2 13 13

Thioalkalimicrobium_cyclicum_ALM1 12 12

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Longest transcript per gene
Genome Number Proteins

Homo_sapiens_69_37 (Human) 1 1

Pan_troglodytes_69_2.1.4 (Chimpanzee) 1 1

Gorilla_gorilla_69_3.1 (Western gorilla) 1 1

Pongo_abelii_69_2 (Sumatran orangutan) 1 1

Nomascus_leucogenys_69_1.0 (Northern white-cheeked gibbon) 1 1

Macaca_mulatta_69_1 (Rhesus monkey) 1 1

Callithrix_jacchus_69_3.2.1 (White-tufted-ear marmoset) 1 1

Otolemur_garnettii_69_3 (Small-eared galago) 1 1

Microcebus_murinus_69_1 (Gray mouse lemur) 1 1

Rattus_norvegicus_69_3.4 (Norway rat) 1 1

Mus_musculus_69_38 (House mouse) 1 1

Dipodomys_ordii_69_1 (Ord's kangaroo rat) 1 1

Ictidomys_tridecemlineatus_69_2 (Thirteen-lined ground squirrel) 1 1

Cavia_porcellus_69_3 (Domestic guinea pig) 1 1

Sus_scrofa_69_10.2 (Pig) 1 1

Bos_taurus_69_3.1 (Cattle) 1 1

Mustela_putorius_furo_69_1.0 (Domestic ferret) 1 1

Ailuropoda_melanoleuca_69_1 (Giant panda) 1 1

Canis_familiaris_69_3.1 (Dog) 1 1

Felis_catus_69 (Domestic cat) 1 1

Equus_caballus_69_2 (Horse) 1 1

Myotis_lucifugus_69_2.0 (Little brown bat) 1 1

Pteropus_vampyrus_69_1 (Large flying fox) 1 1

Procavia_capensis_69_1 (Cape rock hyrax) 1 1

Loxodonta_africana_69_3 (African savanna elephant) 1 1

Echinops_telfairi_69 (Small Madagascar hedgehog) 1 1

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Others
Genome Number Proteins

Homo_sapiens_75_37_(old_version_GRC) (Human) 1 1

Homo_sapiens__(NCBI_version) (Human) 1 1

Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate) (House mouse) 1 1

Moniliophthora_perniciosa_FA553__(Genome_survey) 1 1

Lotus_japonicus__(Early_assembly) 10 10

Ricinus_communis__(Early_assembly) (Castor bean) 113 113

Solanum_pimpinellifolium_A-1.0_(Early_draft) (Currant tomato) 1 1

Solanum_lycopersicum_v2.3_(Early_assembly) (Tomato) 1 1

Wolbachia_endosymbiont_of_Brugia_malayi_v1.0_(Broad_Institute) 2 2

Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 30 30

NCBI_plasmid_sequences_(Plasmids) 935 932

NCBI_viral_sequences_(Viral) 1 1

TargetDB__(Targets) 777 777

STRING_v9.0.5_(STRING) 13728 13655

Protein_Data_Bank_(all_PDB_sequenc) 447 447

Protozoadb_2010_08_(Protozoadb) 21 15

SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 1021 1021

Uniprot_2018_03_genome 385940 384604

NCBI_2017_08_genome 1353683 1351534

PDB_chains_(SCOP_1.75)_(PDB) 41 41

UniProt__viral_sequences_(Viral) 2 2

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Domain combinations for Porins superfamily in groups of genomes