Domain combinations for Aerolisin/ETX pore-forming domain superfamily in groups of genomes

• All genomes
• All eukaryote genomes (domain E)
• All bacterial genomes (domain B+A)
• All eubacterial genomes (domain B)
• All archaeal genomes (domain A)

Groups of genomes may be slower than individual genomes.

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Click on a genome below to view all domain combinations containing a Aerolisin/ETX pore-forming domain domain in that genome.

Complete genomes

Genome		Number	Proteins
Ornithorhynchus_anatinus_76_5	(Platypus)	1	1
Saccoglossus_kowalevskii_v3.0		1	1
Petromyzon_marinus_76_7.0	(Sea lamprey)	26	26
Gallus_gallus_76_4	(Chicken)	1	1
Anas_platyrhynchos_76_1.0	(Mallard)	1	1
Ficedula_albicollis_76_1.0	(Collared flycatcher)	1	1
Anolis_carolinensis_76_2.0	(Green anole)	3	3
Xenopus_laevis_	(African clawed frog)	4	4
Xenopus_tropicalis_76_4.2	(Tropical clawed frog)	5	5
Latimeria_chalumnae_76_1	(Coelacanth)	5	5
Lepisosteus_oculatus_76	(Spotted gar)	7	7
Gadus_morhua_76_1	(Atlantic cod)	6	6
Takifugu_rubripes_76_4	(Torafugu)	1	1
Gasterosteus_aculeatus_76_1	(Three-spined stickleback)	3	3
Oryzias_latipes_76_1	(Japanese medaka)	3	3
Xiphophorus_maculatus_76_4.4.2	(Southern platyfish)	2	2
Poecilia_formosa_76	(Amazon molly)	5	5
Oreochromis_niloticus_76_1.0	(Nile tilapia)	9	9
Astyanax_mexicanus_76	(Mexican tetra)	6	6
Danio_rerio_76_9	(Zebrafish)	12	12
Oikopleura_dioica		1	1
Adineta_vaga		9	9
Octopus_bimaculoides_280		4	4
Crassostrea_gigas_22	(Pacific oyster)	5	5
Lottia_gigantea_	(Owl limpet)	3	3
Helobdella_robusta_		4	4
Capitella_sp._I_		6	6
Danaus_plexippus_OGS1.0	(Monarch butterfly)	1	1
Bombyx_mori_	(Domestic silkworm)	1	1
Apis_mellifera_38.2d_(Not_maintained)	(Honey bee)	1	1
Strigamia_maritima_22		3	3
Ixodes_scapularis__(Preliminary)	(Black-legged tick)	18	18
Pristionchus_pacificus_		1	1
Meloidogyne_incognita_	(Southern root-knot nematode)	2	2
Meloidogyne_hapla_		1	1
Onchocerca_volvulus_22		3	3
Brugia_malayi_WS250	(Agent of lymphatic filariasis)	4	4
Caenorhabditis_japonica_		2	2
Caenorhabditis_brenneri_		3	3
Caenorhabditis_remanei_		2	2
Caenorhabditis_elegans_76_235	(Roundworm)	6	6
Caenorhabditis_briggsae_2		2	2
Trichinella_spiralis_22		3	3
Hymenolepis_microstoma_		2	2
Echinococcus_multilocularis_		2	2
Echinococcus_granulosus_		2	2
Taenia_solium_	(Pork tapeworm)	2	2
Schistosoma_mansoni_		1	1
Mnemiopsis_leidyi	(Sea walnut)	9	9
Acropora_digitifera_v1.0		5	5
Nematostella_vectensis_1.0	(Starlet sea anemone)	10	10
Hydra_vulgaris		2	2
Proterospongia_sp._ATCC_50818_		1	1
Mortierella_verticillata_NRRL_6337_		1	1
Sphaerobolus_stellatus_v1.0		2	2
Coprinopsis_cinerea_okayama7_130_v3		3	3
Galerina_marginata_v1.0		2	2
Hebeloma_cylindrosporum_h7_v2.0		2	2
Laccaria_bicolor_S238N-H82_		4	4
Agaricus_bisporus_var._bisporus_		2	2
Schizophyllum_commune_		12	12
Stereum_hirsutum_FP-91666_SS1__v1.0		1	1
Heterobasidion_annosum_		2	2
Gloeophyllum_trabeumv1.0		1	1
Fomitiporia_mediterranea_v1.0		4	4
Tulasnella_calospora_AL13/4D_v1.0		2	2
Postia_placenta_		3	3
Fomitopsis_pinicolav1.0		3	3
Fomitopsis_pinicola_FP-58527_SS1_v3.0		4	4
Dichomitus_squalens		2	2
Trametes_versicolor_v1.0		4	4
Magnaporthe_poae_ATCC_64411_22		1	1
Podospora_anserina_		1	1
Glomerella_graminicola_22		1	1
Botrytis_cinerea_B05.10_		5	5
Sclerotinia_sclerotiorum_		1	1
Setosphaeria_turcica_v1.0		1	1
Cochliobolus_miyabeanus_ATCC_44560_v1.0		1	1
Cochliobolus_victoriae_FI3_v1.0		1	1
Cochliobolus_carbonum_26-R-13_v1.0		1	1
Cochliobolus_heterostrophus_	(Southern corn leaf blight pathogen)	1	1
Alternaria_brassicicola_		1	1
Trichophyton_equinum_CBS_127.97_		1	1
Trichophyton_verrucosum_HKI_0517_		1	1
Aspergillus_brasiliensis_v1.0		1	1
Aspergillus_carbonarius_ITEM_5010_		1	1
Aspergillus_tubingensis_v1.0		1	1
Aspergillus_wentii_v1.0		1	1
Dictyostelium_discoideum		1	1
Selaginella_moellendorffii_		21	21
Pinus_taeda	(Loblolly pine)	1	1
Picea_abies	(Norway spruce)	1	1
Gossypium_raimondii_v221		10	10
Carica_papaya_	(Papaya)	12	12
Cucumis_sativus_v122	(Cucumber)	8	8
Fragaria_vesca_	(Wild strawberry)	10	10
Malus_domestica_v196	(Apple)	4	4
Linum_usitatissimum_v200	(Flax)	5	5
Vitis_vinifera_	(Wine grape)	3	3
Actinidia_chinensis_Hongyang_		1	1
Aquilegia_coerulea_v195		2	2
Triticum_urartu_22		2	2
Triticum_aestivum_22	(Bread wheat)	7	7
Aegilops_tauschii_22		6	6
Brachypodium_distachyon_	(Stiff brome)	3	3
Phyllostachys_heterocyclavar._pubescens	(Kikko-chiku)	1	1
Panicum_virgatum_v202	(Switchgrass)	7	7
Setaria_italica_v164	(Foxtail millet)	1	1
Zea_mays_subsp._mays_	(Maize)	3	3
Zea_mays_v181	(Maize)	4	4
Bigelowiella_natans_CCMP2755_22		2	2
Cyanophora_paradoxa_		3	3
Pythium_arrhenomanes_ATCC_12531_22		1	1
Calothrix_sp._PCC_7507		1	1
Frankia_alni_ACN14a		1	1
Kitasatospora_setae_KM-6054		1	1
Saccharopolyspora_erythraea_NRRL_2338		1	1
Salinispora_arenicola_CNS-205		4	4
Verrucosispora_maris_AB-18-032		1	1
Clostridium_novyi_NT		1	1
Lysinibacillus_sphaericus_C3-41		5	5
Bacillus_anthracis_str._A0248		1	1
Fibrella_aestuarina		1	1
Candidatus_Solibacter_usitatus_Ellin6076		1	1
Burkholderia_glumae_BGR1		2	2
Aeromonas_veronii_B565		1	1
Aeromonas_salmonicida_subsp._salmonicida_A449		1	1
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966		1	1
Vibrio_harveyi_ATCC_BAA-1116		2	2
Photobacterium_profundum_SS9		1	1
Shewanella_denitrificans_OS217		1	1
Shewanella_baltica_OS185		1	1
Pseudoalteromonas_sp._SM9913		1	1
Hahella_chejuensis_KCTC_2396		1	1
Marinomonas_posidonica_IVIA-Po-181		1	1
Pectobacterium_wasabiae_WPP163		1	1
Pseudomonas_entomophila_L48		1	1
Francisella_cf._novicida_3523		1	1
Methanosarcina_mazei_Go1		1	1
Methanosarcina_barkeri_str._Fusaro		1	1
Halogeometricum_borinquense_DSM_11551		1	1

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Strains

Genome		Number	Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)	(Tropical clawed frog)	7	7
Ascaris_suum_Victoria/Ghent_	(Pig roundworm)	3	3
Caenorhabditis_elegans_WormBase_WS218__(WormBase)	(Roundworm)	3	3
Hordeum_vulgare_22	(Domesticated barley)	10	10
Prochlorococcus_marinus_str._MIT_9303		1	1
Nocardiopsis_alba_ATCC_BAA-2165		1	1
Clostridium_botulinum_BKT015925		4	4
Enterococcus_mundtii_QU_25		2	2
Paenibacillus_larvae_subsp._larvae_DSM_25430		1	1
Bacillus_thuringiensis_HD-789		3	3
Bacillus_thuringiensis_MC28		4	4
Bacillus_thuringiensis_serovar_finitimus_YBT-020		3	3
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056		2	2
Bacillus_cereus_biovar_anthracis_str._CI		1	1
Bacillus_anthracis_str._H9401		1	1
Bacillus_anthracis_str._CDC_684		1	1
Bacillus_anthracis_str._'Ames_Ancestor'		1	1
Bacillus_anthracis_str._A2012		1	1
Echinicola_vietnamensis_DSM_17526		2	2
Aeromonas_hydrophila_ML09-119		1	1
Vibrio_nigripulchritudo_VibrioScope		1	1
Shewanella_baltica_BA175		1	1
Shewanella_baltica_OS117		1	1
Shewanella_baltica_OS195		1	1
Shewanella_baltica_OS155		1	1

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Longest transcript per gene

Genome		Number	Proteins
Ornithorhynchus_anatinus_69_5	(Platypus)	1	1
Petromyzon_marinus_69_7.0	(Sea lamprey)	23	23
Xenopus_tropicalis_69_4.2	(Tropical clawed frog)	5	5
Latimeria_chalumnae_69_1	(Coelacanth)	3	3
Gadus_morhua_69_1	(Atlantic cod)	6	6
Takifugu_rubripes_69_4	(Torafugu)	1	1
Gasterosteus_aculeatus_69_1	(Three-spined stickleback)	3	3
Oryzias_latipes_69_1	(Japanese medaka)	2	2
Xiphophorus_maculatus_69_4.4.2	(Southern platyfish)	2	2
Oreochromis_niloticus_69_1.0	(Nile tilapia)	8	8
Danio_rerio_69_9	(Zebrafish)	10	10
Caenorhabditis_elegans_69_215	(Roundworm)	2	2

Others

Genome		Number	Proteins
Loa_loa_v3.3_(Request)	(Eye worm)	5	5
Wuchereria_bancrofti_v1.0_(Request)	(Agent of lymphatic filariasis)	6	6
Brugia_malayi_v1.0_(Duplicate)	(Agent of lymphatic filariasis)	1	1
Moniliophthora_perniciosa_FA553__(Genome_survey)		2	2
Malus_x_domestica_(Duplicate)	(Apple)	4	4
Ricinus_communis__(Early_assembly)	(Castor bean)	4	4
Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC)		2	2
NCBI_plasmid_sequences_(Plasmids)		43	43
STRING_v9.0.5_(STRING)		114	114
Protein_Data_Bank_(all_PDB_sequenc)		140	140
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ)		171	157
Uniprot_2018_03_genome		2849	2840
TargetDB__(Targets)		3	3
NCBI_2017_08_genome		3215	3207
UniProt__viral_sequences_(Viral)		1	1
PDB_chains_(SCOP_1.75)_(PDB)		4	4
NCBI_viral_sequences_(Viral)		1	1

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