SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for omega toxin-like superfamily in groups of genomes

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a omega toxin-like domain in that genome.

Complete genomes
Genome     Number   Proteins
Heliconius_melpomene_   (Postman butterfly)   1 1
Bombyx_mori_   (Domestic silkworm)   1 1
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   1 1
Linepithema_humile_v1.1   (Argentine ant)   1 1
Solenopsis_invicta_v.2.2.3   (Red fire ant)   1 1
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   1 1
Camponotus_floridanus_v3.3   (Florida carpenter ant)   1 1
Drosophila_willistoni_1.3 1 1
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   1 1
Anopheles_gambiae_49_3j   (African malaria mosquito)   1 1
Tribolium_castaneum_3.0   (Red flour beetle)   1 1
Acyrthosiphon_pisum_   (Pea aphid)   2 2
Rhodnius_prolixus_22 1 1
Daphnia_pulex_   (Common water flea)   1 1
Tetranychus_urticae_   (Two-spotted spider mite)   1 1
Conidiobolus_coronatus_NRRL28638_v1.0 1 1
Medicago_truncatula_   (Barrel medic)   7 7
Phaseolus_vulgaris_v186   (French bean)   16 16
Glycine_max_v109   (Soybean)   2 2

Strains
Genome     Number   Proteins
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   1 1
Xanthomonas_campestris_pv._raphani_756C 1 1

Others
Genome     Number   Proteins
UniProt__viral_sequences_(Viral) 32 22
PDB_chains_(SCOP_1.75)_(PDB) 52 52
Protein_Data_Bank_(all_PDB_sequenc) 129 128
NCBI_2017_08_genome 190 188
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 205 205
Uniprot_2018_03_genome 1183 1166
STRING_v9.0.5_(STRING) 4 4
NCBI_viral_sequences_(Viral) 12 10

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