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Domain combinations for Invertebrate chitin-binding proteins superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Invertebrate chitin-binding proteins domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   9 9
Pan_troglodytes_76_2.1.4   (Chimpanzee)   1 1
Gorilla_gorilla_76_3.1   (Western gorilla)   2 2
Pongo_abelii_76_2   (Sumatran orangutan)   3 3
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   2 2
Papio_anubis_76   (Olive baboon)   3 3
Macaca_mulatta_76_1   (Rhesus monkey)   4 4
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   5 5
Otolemur_garnettii_76_3   (Small-eared galago)   5 5
Microcebus_murinus_76_1   (Gray mouse lemur)   2 2
Rattus_norvegicus_76_5.0   (Norway rat)   2 2
Mus_musculus_76_38   (House mouse)   3 3
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   2 2
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   2 2
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   1 1
Oryctolagus_cuniculus_76_2   (Rabbit)   1 1
Ochotona_princeps_76   (American pika)   1 1
Tupaia_belangeri_76   (Northern tree shrew)   1 1
Sus_scrofa_76_10.2   (Pig)   3 3
Bos_taurus_76_3.1   (Cattle)   3 3
Ovis_aries_76_3.1   (Sheep)   5 5
Vicugna_pacos_76_1   (Alpaca)   1 1
Tursiops_truncatus_76_1   (Bottlenose dolphin)   2 2
Mustela_putorius_furo_76_1.0   (Domestic ferret)   2 2
Ailuropoda_melanoleuca_76_1   (Giant panda)   1 1
Canis_familiaris_76_3.1   (Dog)   1 1
Felis_catus_76_6.2   (Domestic cat)   1 1
Myotis_lucifugus_76_2.0   (Little brown bat)   1 1
Erinaceus_europaeus_76   (Western European hedgehog)   1 1
Procavia_capensis_76_1   (Cape rock hyrax)   1 1
Loxodonta_africana_76_3   (African savanna elephant)   2 2
Echinops_telfairi_76   (Small Madagascar hedgehog)   1 1
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   3 3
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   2 2
Macropus_eugenii_76_1.0   (Tammar wallaby)   1 1
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   5 5
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   6 6
Ornithorhynchus_anatinus_76_5   (Platypus)   1 1
Saccoglossus_kowalevskii_v3.0 3 3
Meleagris_gallopavo_76_2   (Turkey)   2 2
Gallus_gallus_76_4   (Chicken)   2 2
Anas_platyrhynchos_76_1.0   (Mallard)   1 1
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   1 1
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   4 4
Anolis_carolinensis_76_2.0   (Green anole)   4 4
Xenopus_laevis_   (African clawed frog)   2 2
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   4 4
Latimeria_chalumnae_76_1   (Coelacanth)   4 4
Lepisosteus_oculatus_76   (Spotted gar)   4 4
Gadus_morhua_76_1   (Atlantic cod)   6 6
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   5 5
Takifugu_rubripes_76_4   (Torafugu)   6 6
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   18 15
Oryzias_latipes_76_1   (Japanese medaka)   6 6
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   4 4
Poecilia_formosa_76   (Amazon molly)   2 2
Oreochromis_niloticus_76_1.0   (Nile tilapia)   8 8
Astyanax_mexicanus_76   (Mexican tetra)   5 5
Danio_rerio_76_9   (Zebrafish)   5 5
Oikopleura_dioica 31 24
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   19 11
Ciona_intestinalis_76   (Vase tunicate)   26 13
Adineta_vaga 65 44
Octopus_bimaculoides_280 147 81
Crassostrea_gigas_22   (Pacific oyster)   153 76
Lottia_gigantea_   (Owl limpet)   179 85
Helobdella_robusta_ 18 16
Capitella_sp._I_ 152 88
Danaus_plexippus_OGS1.0   (Monarch butterfly)   98 50
Heliconius_melpomene_   (Postman butterfly)   125 48
Bombyx_mori_   (Domestic silkworm)   94 50
Nasonia_vitripennis_   (Jewel wasp)   62 38
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   130 67
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   108 48
Linepithema_humile_v1.1   (Argentine ant)   102 49
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   98 52
Solenopsis_invicta_v.2.2.3   (Red fire ant)   81 43
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   78 41
Atta_cephalotes_v1.1 103 46
Camponotus_floridanus_v3.3   (Florida carpenter ant)   94 47
Lucilia_cuprina   (Australian sheep blowfly)   290 93
Drosophila_grimshawi_1.3 251 91
Drosophila_willistoni_1.3 244 89
Drosophila_pseudoobscura_2.13 230 90
Drosophila_persimilis_1.3 206 82
Drosophila_suzukii 251 81
Drosophila_yakuba_1.3 299 106
Drosophila_simulans_1.3 234 90
Drosophila_sechellia_1.3 257 96
Drosophila_melanogaster_76_5   (Fruit fly)   428 161
Drosophila_erecta_1.3 261 96
Drosophila_ananassae_1.3 259 96
Drosophila_virilis_1.2 239 83
Drosophila_mojavensis_1.3 256 92
Megaselia_scalaris_22 60 38
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   303 134
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   319 138
Anopheles_darlingi_22   (American malaria mosquito)   187 61
Anopheles_gambiae_49_3j   (African malaria mosquito)   238 82
Tribolium_castaneum_3.0   (Red flour beetle)   123 53
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   76 37
Acyrthosiphon_pisum_   (Pea aphid)   52 27
Rhodnius_prolixus_22 83 46
Daphnia_pulex_   (Common water flea)   191 107
Strigamia_maritima_22 101 59
Sarcoptes_scabiei 43 32
Tetranychus_urticae_   (Two-spotted spider mite)   55 42
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   72 47
Pristionchus_pacificus_ 64 17
Meloidogyne_incognita_   (Southern root-knot nematode)   8 3
Meloidogyne_hapla_ 18 4
Onchocerca_volvulus_22 36 11
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   62 21
Caenorhabditis_japonica_ 42 10
Caenorhabditis_brenneri_ 73 23
Caenorhabditis_remanei_ 49 13
Caenorhabditis_elegans_76_235   (Roundworm)   64 22
Caenorhabditis_briggsae_2 60 13
Trichinella_spiralis_22 40 16
Mnemiopsis_leidyi   (Sea walnut)   4 4
Thelohanellus_kitauei 2 2
Acropora_digitifera_v1.0 10 7
Nematostella_vectensis_1.0   (Starlet sea anemone)   31 17
Hydra_vulgaris 43 15
Mucor_circinelloides_ 1 1
Apiospora_montagnei_NRRL_25634_v1.0 2 2
Dothistroma_septosporum 1 1
Septoria_musiva_v1.0 1 1
Mycosphaerella_fijiensis_CIRAD86_ 1 1
Microsporum_canis_CBS_113480_ 1 1
Penicillium_chrysogenum_Wisconsin_54-1255_ 1 1
Penicillium_chrysogenum_v1.0 1 1
Aspergillus_acidus_v1.0 1 1
Aspergillus_fumigatus_Af293 1 1
Aspergillus_brasiliensis_v1.0 1 1
Aspergillus_nidulans_FGSC_A4_ 1 1
Aspergillus_sydowii_v1.0 2 2
Aspergillus_versicolor_v1.0 2 2
Aspergillus_glaucus 2 2
Aspergillus_carbonarius_ITEM_5010_ 1 1
Neosartorya_fischeri_NRRL_181_ 2 2
Aspergillus_terreus_NIH2624_ 1 1
Aspergillus_tubingensis_v1.0 2 2
Aspergillus_wentii_v1.0 2 2
Aspergillus_oryzae_RIB40_ 1 1
Aspergillus_niger_22 2 2
Aspergillus_niger_ATCC_1015_ 1 1
Aspergillus_flavus_NRRL3357_ 2 2
Aspergillus_clavatus_NRRL_1_ 1 1
Dictyostelium_purpureum_ 1 1
Chlorella_variabilis_sp._NC64A_ 3 3
Volvox_carteri_f._nagariensis_ 1 1
Volvox_carteri_v199 1 1
Chlamydomonas_reinhardtii_4.0 1 1
Albugo_laibachii_22 1 1
Phaeodactylum_tricornutumCCAP_1055/1 1 1
Fragilariopsis_cylindrus 1 1
Thalassiosira_pseudonana_CCMP1335 34 23
Stackebrandtia_nassauensis_DSM_44728 1 1
Ralstonia_pickettii_12D 1 1
Ralstonia_solanacearum_CFBP2957 1 1

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   10 10
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   339 125
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   265 90
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   102 20
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   47 15
Aspergillus_fumigatus_A1163_ 1 1
Streptomyces_fulvissimus_DSM_40593 1 1
Streptomyces_collinus_Tu_365 1 1
Nocardia_brasiliensis_ATCC_700358 1 1
Ralstonia_pickettii_12J 1 1
Ralstonia_solanacearum_FQY_4 1 1
Ralstonia_solanacearum_Po82 1 1
Ralstonia_solanacearum_PSI07 1 1
Ralstonia_solanacearum_CMR15 1 1
Ralstonia_solanacearum_GMI1000 1 1

Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   2 2
Pan_troglodytes_69_2.1.4   (Chimpanzee)   1 1
Gorilla_gorilla_69_3.1   (Western gorilla)   2 2
Pongo_abelii_69_2   (Sumatran orangutan)   3 3
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   2 2
Macaca_mulatta_69_1   (Rhesus monkey)   2 2
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   3 3
Otolemur_garnettii_69_3   (Small-eared galago)   4 4
Microcebus_murinus_69_1   (Gray mouse lemur)   2 2
Rattus_norvegicus_69_3.4   (Norway rat)   2 2
Mus_musculus_69_38   (House mouse)   2 2
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   2 2
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   1 1
Oryctolagus_cuniculus_69_2   (Rabbit)   1 1
Ochotona_princeps_69   (American pika)   1 1
Tupaia_belangeri_69   (Northern tree shrew)   1 1
Sus_scrofa_69_10.2   (Pig)   3 3
Bos_taurus_69_3.1   (Cattle)   2 2
Vicugna_pacos_69_1   (Alpaca)   1 1
Tursiops_truncatus_69_1   (Bottlenose dolphin)   2 2
Mustela_putorius_furo_69_1.0   (Domestic ferret)   2 2
Ailuropoda_melanoleuca_69_1   (Giant panda)   1 1
Canis_familiaris_69_3.1   (Dog)   1 1
Felis_catus_69   (Domestic cat)   1 1
Myotis_lucifugus_69_2.0   (Little brown bat)   1 1
Erinaceus_europaeus_69   (Western European hedgehog)   1 1
Procavia_capensis_69_1   (Cape rock hyrax)   1 1
Loxodonta_africana_69_3   (African savanna elephant)   2 2
Echinops_telfairi_69   (Small Madagascar hedgehog)   1 1
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   1 1
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   2 2
Macropus_eugenii_69_1.0   (Tammar wallaby)   1 1
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   4 4
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   6 6
Ornithorhynchus_anatinus_69_5   (Platypus)   1 1
Meleagris_gallopavo_69_2   (Turkey)   1 1
Gallus_gallus_69_2   (Chicken)   2 2
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   1 1
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   3 3
Anolis_carolinensis_69_2.0   (Green anole)   3 3
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   3 3
Latimeria_chalumnae_69_1   (Coelacanth)   2 2
Gadus_morhua_69_1   (Atlantic cod)   6 6
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   2 2
Takifugu_rubripes_69_4   (Torafugu)   3 3
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   10 9
Oryzias_latipes_69_1   (Japanese medaka)   5 5
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   4 4
Oreochromis_niloticus_69_1.0   (Nile tilapia)   5 5
Danio_rerio_69_9   (Zebrafish)   4 4
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   15 9
Ciona_intestinalis_69   (Vase tunicate)   25 12
Drosophila_melanogaster_69_5   (Fruit fly)   284 100
Caenorhabditis_elegans_69_215   (Roundworm)   44 12

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   10 10
Homo_sapiens__(NCBI_version)   (Human)   3 3
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   2 2
Heliconius_numata__(Incomplete) 104 63
Loa_loa_v3.3_(Request)   (Eye worm)   39 13
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   41 15
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   31 7
NCBI_plasmid_sequences_(Plasmids) 4 4
Protein_Data_Bank_(all_PDB_sequenc) 22 22
UniProt__viral_sequences_(Viral) 191 176
NCBI_viral_sequences_(Viral) 216 198
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 12 12
STRING_v9.0.5_(STRING) 3710 1499
TargetDB__(Targets) 42 10
NCBI_2017_08_genome 26250 11984
PDB_chains_(SCOP_1.75)_(PDB) 3 3
Uniprot_2018_03_genome 38670 18130

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