SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for Coiled-coil dimerization domain from cortexillin I superfamily in groups of genomes

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Coiled-coil dimerization domain from cortexillin I domain in that genome.

Complete genomes
Genome     Number   Proteins
Equus_caballus_76_2   (Horse)   3 3
Petromyzon_marinus_76_7.0   (Sea lamprey)   1 1
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   1 1
Anopheles_darlingi_22   (American malaria mosquito)   1 1
Mucor_circinelloides_ 1 1
Dictyostelium_discoideum 2 2
Dictyostelium_purpureum_ 2 2

Longest transcript per gene
Genome     Number   Proteins
Equus_caballus_69_2   (Horse)   3 3
Petromyzon_marinus_69_7.0   (Sea lamprey)   1 1

Others
Genome     Number   Proteins
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 5 5
STRING_v9.0.5_(STRING) 7 7
Protein_Data_Bank_(all_PDB_sequenc) 15 15
NCBI_2017_08_genome 21 21
Uniprot_2018_03_genome 65 65
PDB_chains_(SCOP_1.75)_(PDB) 2 2

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