SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for Colicin Ia, N-terminal domain superfamily in groups of genomes

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Colicin Ia, N-terminal domain domain in that genome.

Complete genomes
Genome     Number   Proteins
Xenorhabdus_nematophila_ATCC_19061 1 1

Strains
Genome     Number   Proteins
Serratia_plymuthica_S13 1 1
Serratia_liquefaciens_ATCC_27592 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._ST4/74 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344 1 1
Salmonella_enterica_subsp._enterica_Serovar_Heidelberg_str._CFSAN002069 1 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._41578 1 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._SL476 1 1
Escherichia_coli_UMNK88 1 1
Escherichia_coli_S88 1 1
Escherichia_coli_SE11 1 1
Escherichia_coli_O55:H7_str._RM12579 1 1
Escherichia_coli_O55:H7_str._CB9615 1 1

Others
Genome     Number   Proteins
NCBI_plasmid_sequences_(Plasmids) 37 37
PDB_chains_(SCOP_1.75)_(PDB) 1 1
Protein_Data_Bank_(all_PDB_sequenc) 2 2
STRING_v9.0.5_(STRING) 3 3
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 4 4
Uniprot_2018_03_genome 155 155
NCBI_2017_08_genome 2014 2014

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