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Domain combinations for PTS-regulatory domain, PRD superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a PTS-regulatory domain, PRD domain in that genome.

Complete genomes
Genome     Number   Proteins
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   2 2
Aspergillus_zonatus_v1.0 8 4
Physcomitrella_patens 1 1
Mycoplasma_penetrans_HF-2 3 3
Olsenella_uli_DSM_7084 2 2
Coriobacterium_glomerans_PW2 12 7
Nakamurella_multipartita_DSM_44233 2 1
Streptomyces_sp._SirexAA-E 1 1
Streptomyces_griseus_subsp._griseus_NBRC_13350 1 1
Propionibacterium_propionicum_F0230a 1 1
Propionibacterium_acnes_SK137 4 3
Corynebacterium_aurimucosum_ATCC_700975 2 1
Corynebacterium_kroppenstedtii_DSM_44385 2 1
Corynebacterium_ulcerans_0102 1 1
Corynebacterium_pseudotuberculosis_316 2 1
Corynebacterium_glutamicum_R 4 2
Corynebacterium_diphtheriae_NCTC_13129 2 1
Leifsonia_xyli_subsp._xyli_str._CTCB07 1 1
Microbacterium_testaceum_StLB037 3 2
Clavibacter_michiganensis_subsp._michiganensis_NCPPB_382 1 1
Arthrobacter_chlorophenolicus_A6 2 1
Rothia_mucilaginosa_DY-18 2 1
Rothia_dentocariosa_ATCC_17931 2 1
Arthrobacter_sp._FB24 2 1
Bifidobacterium_longum_subsp._longum_JDM301 2 1
Bifidobacterium_breve_ACS-071-V-Sch8b 4 2
Bifidobacterium_bifidum_S17 2 1
Bifidobacterium_adolescentis_ATCC_15703 2 1
Arcanobacterium_haemolyticum_DSM_20595 3 2
Actinomyces_sp._F0330 2 1
Anaerococcus_prevotii_DSM_20548 2 1
Megasphaera_elsdenii_DSM_20460 2 1
Megamonas_hypermegale 4 3
Selenomonas_ruminantium_subsp._lactilytica_TAM6421 6 3
Erysipelothrix_rhusiopathiae_str._Fujisawa 9 5
Symbiobacterium_thermophilum_IAM_14863 8 5
Ethanoligenens_harbinense_YUAN-3 3 3
Faecalibacterium_prausnitzii 6 3
Ruminococcus_sp. 2 1
Ruminococcus_albus_7 2 1
Thermaerobacter_marianensis_DSM_12885 6 3
butyrate-producing_bacterium_SM4/1 3 2
Desulfosporosinus_acidiphilus_SJ4 4 2
Desulfotomaculum_reducens_MI-1 2 1
Acetobacterium_woodii_DSM_1030 2 1
Eubacterium_limosum_KIST612 3 2
Clostridium_difficile_630 49 30
Clostridium_saccharolyticum_WM1 23 15
Clostridium_lentocellum_DSM_5427 2 1
[Ruminococcus]_obeum 2 1
[Ruminococcus]_torques 5 3
Eubacterium_rectale_M104/1 3 2
Eubacterium_rectale_ATCC_33656 2 2
Roseburia_hominis_A2-183 5 3
Roseburia_intestinalis 2 1
Butyrivibrio_fibrisolvens 2 1
Alkaliphilus_metalliredigens_QYMF 5 3
Candidatus_Arthromitus_sp._SFB-mouse-Japan 5 3
Clostridium_sp._BNL1100 2 1
Clostridium_novyi_NT 2 1
Clostridium_beijerinckii_NCIMB_8052 37 23
Clostridium_tetani_E88 2 1
Clostridium_perfringens_ATCC_13124 2 1
Clostridium_cellulovorans_743B 5 3
Clostridium_botulinum_A_str._ATCC_3502 12 6
Clostridium_acetobutylicum_ATCC_824 11 6
Thermosediminibacter_oceani_DSM_16646 13 7
Thermoanaerobacterium_xylanolyticum_LX-11 17 9
Thermoanaerobacterium_thermosaccharolyticum_DSM_571 21 11
Tepidanaerobacter_acetatoxydans_Re1 22 12
Thermoanaerobacter_tengcongensis_MB4 11 6
Thermoanaerobacter_mathranii_subsp._mathranii_str._A3 15 8
Thermoanaerobacter_pseudethanolicus_ATCC_33223 15 8
Thermoanaerobacter_sp._X514 16 9
Thermoanaerobacter_italicus_Ab9 19 10
Thermoanaerobacter_wiegelii_Rt8.B1 20 11
Thermoanaerobacter_brockii_subsp._finnii_Ako-1 15 8
Halothermothrix_orenii_H_168 2 1
Halanaerobium_hydrogeniformans 9 5
Halanaerobium_praevalens_DSM_2228 6 3
Carnobacterium_sp._17-4 21 14
Carnobacterium_sp._WN1359 7 4
Aerococcus_urinae_ACS-120-V-Col10a 7 5
Tetragenococcus_halophilus_NBRC_12172 21 14
Melissococcus_plutonius_DAT561 11 6
Enterococcus_sp._7L76 17 11
Enterococcus_hirae_ATCC_9790 13 7
Enterococcus_faecium_Aus0004 25 18
Enterococcus_faecalis_62 25 17
Oenococcus_oeni_PSU-1 3 2
Leuconostoc_sp._C2 4 2
Leuconostoc_kimchii_IMSNU_11154 6 3
Leuconostoc_citreum_KM20 4 2
Leuconostoc_mesenteroides_subsp._mesenteroides_ATCC_8293 4 2
Leuconostoc_gasicomitatum_LMG_18811 4 2
Lactobacillus_casei_ATCC_334 16 11
Lactobacillus_kefiranofaciens_ZW3 2 1
Lactobacillus_crispatus_ST1 9 5
Lactobacillus_rhamnosus_Lc_705 24 16
Lactobacillus_johnsonii_FI9785 4 2
Lactobacillus_salivarius_CECT_5713 1 1
Lactobacillus_ruminis_ATCC_27782 2 1
Lactobacillus_amylovorus_GRL1118 2 2
Lactobacillus_gasseri_ATCC_33323 8 4
Lactobacillus_plantarum_JDM1 18 11
Lactobacillus_acidophilus_30SC 2 2
Pediococcus_claussenii_ATCC_BAA-344 2 1
Pediococcus_pentosaceus_ATCC_25745 7 4
Lactococcus_garvieae_ATCC_49156 4 3
Lactococcus_lactis_subsp._cremoris_MG1363 2 2
Streptococcus_sp._I-P16 1 1
Streptococcus_sp._I-G2 3 2
Streptococcus_intermedius_JTH08 5 3
Streptococcus_gallolyticus_UCN34 15 9
Streptococcus_pseudopneumoniae_IS7493 7 4
Streptococcus_pasteurianus_ATCC_43144 19 11
Streptococcus_equi_subsp._equi_4047 7 5
Streptococcus_dysgalactiae_subsp._equisimilis_GGS_124 9 6
Streptococcus_infantarius_subsp._infantarius_CJ18 3 2
Streptococcus_macedonicus_ACA-DC_198 2 1
Streptococcus_mitis_B6 4 3
Streptococcus_uberis_0140J 11 7
Streptococcus_parauberis_KCTC_11537 7 5
Streptococcus_parasanguinis_ATCC_15912 2 1
Streptococcus_pyogenes_str._Manfredo 6 4
Streptococcus_pneumoniae_P1031 8 5
Streptococcus_agalactiae_A909 6 5
Streptococcus_mutans_NN2025 7 5
Streptococcus_suis_P1/7 8 5
Streptococcus_sanguinis_SK36 5 3
Streptococcus_salivarius_57.I 4 2
Streptococcus_oralis_Uo5 2 1
Streptococcus_gordonii_str._Challis_substr._CH1 9 5
Exiguobacterium_sp._MH3 6 4
Exiguobacterium_sp._AT1b 7 4
Exiguobacterium_sibiricum_255-15 4 2
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_DSM_446 1 1
Brevibacillus_brevis_NBRC_100599 10 5
Paenibacillus_sp._JDR-2 4 2
Paenibacillus_terrae_HPL-003 35 19
Paenibacillus_mucilaginosus_3016 5 3
Paenibacillus_polymyxa_M1 21 11
Bacillus_selenitireducens_MLS10 3 2
Listeria_welshimeri_serovar_6b_str._SLCC5334 26 15
Listeria_innocua_Clip11262 23 14
Listeria_seeligeri_serovar_1/2b_str._SLCC3954 17 10
Listeria_monocytogenes_serotype_4b_str._CLIP_80459 27 16
Listeria_ivanovii_subsp._ivanovii_PAM_55 21 13
Geobacillus_thermoglucosidasius_C56-YS93 6 3
Lysinibacillus_sphaericus_C3-41 1 1
Oceanobacillus_iheyensis_HTE831 8 5
Anoxybacillus_flavithermus_WK1 6 3
Geobacillus_thermoleovorans_CCB_US3_UF5 4 2
Geobacillus_kaustophilus_HTA426 8 4
Geobacillus_sp._GHH01 6 3
Geobacillus_sp._WCH70 6 3
Geobacillus_thermodenitrificans_NG80-2 6 3
Halobacillus_halophilus_DSM_2266 6 3
Bacillus_sp._JS 16 8
Bacillus_sp._1NLA3E 9 5
Bacillus_amyloliquefaciens_FZB42 12 6
Bacillus_atrophaeus_1942 16 8
Bacillus_subtilis_subsp._subtilis_str._168 16 8
Bacillus_licheniformis_DSM_13_=_ATCC_14580 20 11
Bacillus_halodurans_C-125 13 7
Bacillus_weihenstephanensis_KBAB4 6 3
Bacillus_thuringiensis_str._Al_Hakam 8 4
Bacillus_cereus_03BB102 9 5
Bacillus_anthracis_str._A0248 9 6
Bacillus_pseudofirmus_OF4 10 5
Bacillus_clausii_KSM-K16 24 17
Bacillus_cellulosilyticus_DSM_2522 2 1
Bacillus_pumilus_SAFR-032 22 11
Bacillus_megaterium_DSM_319 12 6
Bacillus_coagulans_2-6 8 4
Macrococcus_caseolyticus_JCSC5402 2 1
Staphylococcus_pseudintermedius_HKU10-03 6 3
Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305 5 3
Staphylococcus_lugdunensis_HKU09-01 4 3
Staphylococcus_haemolyticus_JCSC1435 4 2
Staphylococcus_epidermidis_RP62A 3 2
Staphylococcus_carnosus_subsp._carnosus_TM300 7 4
Staphylococcus_aureus_subsp._aureus_JH1 10 5
Staphylococcus_aureus 10 5
Thermanaerovibrio_acidaminovorans_DSM_6589 4 2
Anaerobaculum_mobile_DSM_13181 2 1
Brachyspira_murdochii_DSM_12563 2 1
Brachyspira_intermedia_PWS/A 4 2
Brachyspira_pilosicoli_95/1000 2 1
Brachyspira_hyodysenteriae_WA1 2 1
Sphaerochaeta_coccoides_DSM_17374 1 1
Spirochaeta_caldaria_DSM_7334 1 1
Treponema_primitia_ZAS-2 5 3
Treponema_brennaborense_DSM_12168 2 1
Caldisericum_exile_AZM16c01 2 1
Streptobacillus_moniliformis_DSM_12112 5 4
Sebaldella_termitidis_ATCC_33386 37 25
Leptotrichia_buccalis_C-1013-b 1 1
Ilyobacter_polytropus_DSM_2926 2 1
Fusobacterium_nucleatum_subsp._nucleatum_ATCC_25586 1 1
Aggregatibacter_aphrophilus_NJ8700 1 1
Aggregatibacter_actinomycetemcomitans_D7S-1 1 1
Haemophilus_somnus_129PT 1 1
Pasteurella_multocida_subsp._multocida_str._3480 1 1
Haemophilus_parainfluenzae_T3T1 1 1
Haemophilus_influenzae_PittEE 1 1
Actinobacillus_succinogenes_130Z 4 2
Aeromonas_veronii_B565 2 2
Aeromonas_salmonicida_subsp._salmonicida_A449 1 1
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 2 2
Aliivibrio_salmonicida_LFI1238 3 2
Vibrio_fischeri_MJ11 3 2
Vibrio_anguillarum_775 1 1
Photorhabdus_asymbiotica 3 2
Photorhabdus_luminescens_subsp._laumondii_TTO1 3 2
Xenorhabdus_bovienii_SS-2004 1 1
Xenorhabdus_nematophila_ATCC_19061 1 1
Providencia_stuartii_MRSN_2154 2 2
Proteus_mirabilis_HI4320 2 1
Edwardsiella_tarda_EIB202 2 2
Rahnella_sp._Y9602 6 4
Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 6 4
Yersinia_pseudotuberculosis_IP_31758 1 1
Yersinia_pestis_Pestoides_F 1 1
Yersinia_enterocolitica_subsp._enterocolitica_8081 7 6
Serratia_sp._AS12 7 5
Serratia_sp._ATCC_39006 8 5
Serratia_plymuthica_AS9 7 5
Serratia_proteamaculans_568 6 5
Dickeya_dadantii_Ech703 8 5
Dickeya_zeae_Ech1591 4 2
Pectobacterium_wasabiae_WPP163 10 6
Pectobacterium_sp._SCC3193 12 7
Pectobacterium_atrosepticum_SCRI1043 10 5
Pectobacterium_carotovorum_subsp._carotovorum_PC1 11 6
Pantoea_sp._At-9b 13 8
Pantoea_vagans_C9-1 7 5
Pantoea_ananatis_LMG_20103 10 7
Erwinia_tasmaniensis_Et1/99 2 2
Erwinia_sp._Ejp617 3 3
Erwinia_billingiae_Eb661 6 4
Erwinia_pyrifoliae_Ep1/96 3 3
Erwinia_amylovora_ATCC_49946 3 3
Escherichia_blattae_DSM_4481 3 3
Cronobacter_turicensis_z3032 3 2
Cronobacter_sakazakii_ES15 5 4
Enterobacteriaceae_bacterium_strain_FGI_57 6 5
Shigella_sonnei_Ss046 4 3
Shigella_flexneri_5_str._8401 4 3
Shigella_dysenteriae_Sd197 1 1
Shigella_boydii_CDC_3083-94 3 3
Salmonella_bongori_NCTC_12419 8 6
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_C_strain_RKS4594 7 5
Klebsiella_oxytoca_E718 15 10
Klebsiella_variicola_At-22 8 6
Klebsiella_pneumoniae_NTUH-K2044 7 6
Enterobacter_aerogenes_KCTC_2190 7 5
Escherichia_fergusonii_ATCC_35469 4 3
Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 4 3
Enterobacter_sp._R4-368 7 5
Enterobacter_sp._638 7 5
Enterobacter_asburiae_LF7a 7 5
Enterobacter_cloacae_subsp._dissolvens_SDM 5 4
Citrobacter_rodentium_ICC168 6 5
Citrobacter_koseri_ATCC_BAA-895 5 5

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Strains
Genome     Number   Proteins
Batrachochytrium_dendrobatidis_JAM81_ 1 1
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   1 1
Propionibacterium_avidum_44067 2 1
Propionibacterium_acnes_ATCC_11828 3 2
Propionibacterium_acnes_TypeIA2_P.acn31 4 3
Propionibacterium_acnes_TypeIA2_P.acn17 4 3
Propionibacterium_acnes_TypeIA2_P.acn33 4 3
Propionibacterium_acnes_C1 4 3
Propionibacterium_acnes_HL096PA1 3 2
Propionibacterium_acnes_6609 3 2
Propionibacterium_acnes_266 4 3
Propionibacterium_acnes_KPA171202 3 2
Propionibacterium_acidipropionici_ATCC_4875 2 2
Corynebacterium_ulcerans_BR-AD22 1 1
Corynebacterium_ulcerans_809 1 1
Corynebacterium_callunae_DSM_20147 4 2
Corynebacterium_pseudotuberculosis_258 2 1
Corynebacterium_pseudotuberculosis_Cp162 2 1
Corynebacterium_pseudotuberculosis_P54B96 2 1
Corynebacterium_pseudotuberculosis_267 2 1
Corynebacterium_pseudotuberculosis_1/06-A 2 1
Corynebacterium_pseudotuberculosis_42/02-A 2 1
Corynebacterium_pseudotuberculosis_3/99-5 2 1
Corynebacterium_pseudotuberculosis_31 2 1
Corynebacterium_pseudotuberculosis_CIP_52.97 2 1
Corynebacterium_pseudotuberculosis_PAT10 2 1
Corynebacterium_pseudotuberculosis_I19 2 1
Corynebacterium_pseudotuberculosis_FRC41 2 1
Corynebacterium_pseudotuberculosis_C231 2 1
Corynebacterium_pseudotuberculosis_1002 2 1
Corynebacterium_glutamicum_SCgG2 4 2
Corynebacterium_glutamicum_SCgG1 4 2
Corynebacterium_glutamicum_ATCC_13032 2 1
Corynebacterium_glutamicum_ATCC_13032 2 1
Corynebacterium_glutamicum_ATCC_13032 2 1
Corynebacterium_diphtheriae_BH8 2 1
Corynebacterium_diphtheriae_INCA_402 2 1
Corynebacterium_diphtheriae_VA01 2 1
Corynebacterium_diphtheriae_HC04 2 1
Corynebacterium_diphtheriae_HC03 2 1
Corynebacterium_diphtheriae_HC02 2 1
Corynebacterium_diphtheriae_HC01 2 1
Corynebacterium_diphtheriae_241 2 1
Corynebacterium_diphtheriae_CDCE_8392 2 1
Corynebacterium_diphtheriae_PW8 2 1
Corynebacterium_diphtheriae_C7_(beta) 2 1
Corynebacterium_diphtheriae_31A 2 1
Leifsonia_xyli_subsp._cynodontis_DSM_46306 1 1
Clavibacter_michiganensis_subsp._sepedonicus 1 1
Clavibacter_michiganensis_subsp._nebraskensis_NCPPB_2581 1 1
Bifidobacterium_longum_NCC2705 2 1
Bifidobacterium_longum_DJO10A 2 1
Bifidobacterium_longum_subsp._infantis_157F 2 1
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 2 2
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 2 2
Bifidobacterium_longum_subsp._longum_KACC_91563 2 1
Bifidobacterium_longum_subsp._longum_BBMN68 2 1
Bifidobacterium_longum_subsp._longum_F8 2 1
Bifidobacterium_longum_subsp._longum_JCM_1217 2 1
Bifidobacterium_thermophilum_RBL67 2 1
Bifidobacterium_breve_UCC2003 4 2
Bifidobacterium_asteroides_PRL2011 2 1
Bifidobacterium_bifidum_PRL2010 2 1
Bifidobacterium_bifidum_BGN4 2 1
[Eubacterium]_cylindroides_[Eubacterium]_cylindroides_T2-87 2 1
Erysipelothrix_rhusiopathiae_SY1027 8 4
Faecalibacterium_prausnitzii_L2-6 1 1
Clostridium_difficile_BI1 47 29
Clostridium_difficile_R20291 49 30
Clostridium_difficile_CD196 47 29
Clostridium_saccharolyticum_Clostridium_cf._saccharolyticum_K10 6 4
Roseburia_intestinalis_XB6B4 2 1
Candidatus_Arthromitus_sp._SFB-rat-Yit 3 2
Candidatus_Arthromitus_sp._SFB-mouse-Yit 5 3
Clostridium_saccharobutylicum_DSM_13864 13 7
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 33 18
Clostridium_tetani_genome_12124569 4 2
Clostridium_perfringens_SM101 2 1
Clostridium_perfringens_str._13 2 2
Clostridium_pasteurianum_BC1 10 7
Clostridium_botulinum_H04402_065 13 7
Clostridium_botulinum_BKT015925 4 2
Clostridium_botulinum_F_str._230613 12 6
Clostridium_botulinum_F_str._Langeland 14 7
Clostridium_botulinum_E3_str._Alaska_E43 9 5
Clostridium_botulinum_B1_str._Okra 14 7
Clostridium_botulinum_Ba4_str._657 10 5
Clostridium_botulinum_A2_str._Kyoto 10 5
Clostridium_botulinum_A3_str._Loch_Maree 10 5
Clostridium_botulinum_A_str._Hall 12 6
Clostridium_botulinum_A_str._ATCC_19397 12 6
Clostridium_acetobutylicum_DSM_1731 11 6
Clostridium_acetobutylicum_EA_2018 11 6
Thermoanaerobacterium_saccharolyticum_JW/SL-YS485 15 8
Thermoanaerobacterium_thermosaccharolyticum_M0795 29 16
Thermoanaerobacter_sp._X513 16 9
Halobacteroides_halobius_DSM_5150 10 5
Carnobacterium_maltaromaticum_LMA28 27 17
Melissococcus_plutonius_ATCC_35311 11 7
Enterococcus_mundtii_QU_25 28 20
Enterococcus_casseliflavus_EC20 32 21
Enterococcus_faecium_Aus0085 28 19
Enterococcus_faecium_NRRL_B-2354 26 16
Enterococcus_faecium_DO 31 22
Enterococcus_faecalis_str._Symbioflor_1 19 13
Enterococcus_faecalis_D32 23 15
Enterococcus_faecalis_OG1RF 21 14
Enterococcus_faecalis_V583 17 12
Leuconostoc_carnosum_JB16 2 1
Leuconostoc_mesenteroides_subsp._mesenteroides_J18 4 2
Leuconostoc_gelidum_JB7 4 2
Lactobacillus_paracasei_subsp._paracasei_8700:2 20 14
Lactobacillus_casei_LOCK919 24 17
Lactobacillus_casei_W56 21 15
Lactobacillus_casei_LC2W 23 16
Lactobacillus_casei_BD-II 21 15
Lactobacillus_casei_BL23 21 15
Lactobacillus_casei_str._Zhang 18 13
Lactobacillus_rhamnosus_LOCK908 20 14
Lactobacillus_rhamnosus_LOCK900 19 14
Lactobacillus_rhamnosus_ATCC_8530 20 14
Lactobacillus_rhamnosus_GG 13 10
Lactobacillus_rhamnosus_GG 13 10
Lactobacillus_johnsonii_N6.2 2 1
Lactobacillus_johnsonii_DPC_6026 2 1
Lactobacillus_johnsonii_NCC_533 8 4
Lactobacillus_salivarius_UCC118 1 1
Lactobacillus_plantarum_16 15 9
Lactobacillus_plantarum_ZJ316 15 9
Lactobacillus_plantarum_subsp._plantarum_ST-III 17 10
Lactobacillus_plantarum_subsp._plantarum_P-8 15 9
Lactobacillus_plantarum_WCFS1 19 12
Lactobacillus_helveticus_R0052 2 1
Lactobacillus_helveticus_H10 2 1
Lactobacillus_delbrueckii_subsp._bulgaricus_ND02 2 1
Lactobacillus_acidophilus_La-14 6 3
Lactobacillus_acidophilus_NCFM 6 3
Pediococcus_pentosaceus_SL4 6 4
Lactococcus_garvieae_Lg2 4 3
Lactococcus_lactis_subsp._lactis_KLDS_4.0325 3 2
Lactococcus_lactis_subsp._lactis_IO-1 5 4
Lactococcus_lactis_subsp._lactis_CV56 3 2
Lactococcus_lactis_subsp._lactis_KF147 9 6
Lactococcus_lactis_subsp._lactis_Il1403 3 2
Lactococcus_lactis_subsp._cremoris_KW2 6 4
Lactococcus_lactis_subsp._cremoris_UC509.9 1 1
Lactococcus_lactis_subsp._cremoris_A76 4 3
Lactococcus_lactis_subsp._cremoris_NZ9000 4 4
Lactococcus_lactis_subsp._cremoris_SK11 4 3
Streptococcus_constellatus_subsp._pharyngis_C1050 6 4
Streptococcus_constellatus_subsp._pharyngis_C818 6 4
Streptococcus_constellatus_subsp._pharyngis_C232 6 4
Streptococcus_intermedius_B196 5 3
Streptococcus_intermedius_C270 6 4
Streptococcus_anginosus_C238 7 5
Streptococcus_anginosus_C1051 6 3
Streptococcus_gallolyticus_subsp._gallolyticus_ATCC_BAA-2069 15 9
Streptococcus_gallolyticus_subsp._gallolyticus_ATCC_43143 14 8
Streptococcus_lutetiensis_033 6 3
Streptococcus_equi_subsp._zooepidemicus_ATCC_35246 9 6
Streptococcus_equi_subsp._zooepidemicus_MGCS10565 9 6
Streptococcus_equi_subsp._zooepidemicus 9 6
Streptococcus_dysgalactiae_subsp._equisimilis_167 8 5
Streptococcus_dysgalactiae_subsp._equisimilis_AC-2713 5 4
Streptococcus_dysgalactiae_subsp._equisimilis_ATCC_12394 7 5
Streptococcus_dysgalactiae_subsp._equisimilis_RE378 9 6
Streptococcus_iniae_SF1 6 4
Streptococcus_parasanguinis_FW213 2 1
Streptococcus_pyogenes_HSC5 6 4
Streptococcus_pyogenes_A20 6 4
Streptococcus_pyogenes_MGAS1882 6 4
Streptococcus_pyogenes_MGAS15252 6 4
Streptococcus_pyogenes_Alab49 6 4
Streptococcus_pyogenes_MGAS10750 6 4
Streptococcus_pyogenes_MGAS10270 6 4
Streptococcus_pyogenes_MGAS2096 6 4
Streptococcus_pyogenes_MGAS9429 6 4
Streptococcus_pyogenes_MGAS6180 6 4
Streptococcus_pyogenes_NZ131 6 4
Streptococcus_pyogenes_MGAS8232 6 4
Streptococcus_pyogenes_MGAS10394 6 4
Streptococcus_pyogenes_MGAS315 6 4
Streptococcus_pyogenes_SSI-1 6 4
Streptococcus_pyogenes_M1_476 6 4
Streptococcus_pyogenes_MGAS5005 6 4
Streptococcus_pyogenes_M1_GAS 6 4
Streptococcus_pneumoniae_A026 10 6
Streptococcus_pneumoniae_ST556 10 6
Streptococcus_pneumoniae_SPNA45 8 5
Streptococcus_pneumoniae_SPN994039 10 6
Streptococcus_pneumoniae_SPN994038 10 6
Streptococcus_pneumoniae_SPN034183 10 6
Streptococcus_pneumoniae_SPN034156 10 6
Streptococcus_pneumoniae_INV104 8 5
Streptococcus_pneumoniae_INV200 6 4
Streptococcus_pneumoniae_OXC141 10 6
Streptococcus_pneumoniae_gamPNI0373 10 6
Streptococcus_pneumoniae_AP200 6 4
Streptococcus_pneumoniae_ATCC_700669 6 4
Streptococcus_pneumoniae_TCH8431/19A 8 5
Streptococcus_pneumoniae_CGSP14 8 5
Streptococcus_pneumoniae_G54 6 4
Streptococcus_pneumoniae_JJA 4 3
Streptococcus_pneumoniae_70585 10 6
Streptococcus_pneumoniae_Hungary19A-6 8 5
Streptococcus_pneumoniae_Taiwan19F-14 10 6
Streptococcus_pneumoniae_D39 8 5
Streptococcus_pneumoniae_670-6B 10 6
Streptococcus_pneumoniae_R6 8 5
Streptococcus_pneumoniae_TIGR4 10 6
Streptococcus_agalactiae_ILRI112 5 4
Streptococcus_agalactiae_ILRI005 5 4
Streptococcus_agalactiae_09mas018883 7 5
Streptococcus_agalactiae_2-22 3 3
Streptococcus_agalactiae_SA20-06 5 4
Streptococcus_agalactiae_GD201008-001 6 5
Streptococcus_agalactiae_NEM316 6 4
Streptococcus_agalactiae_2603V/R 4 3
Streptococcus_mutans_GS-5 7 5
Streptococcus_mutans_LJ23 7 5
Streptococcus_mutans_UA159 6 4
Streptococcus_thermophilus_MN-ZLW-002 2 2
Streptococcus_thermophilus_JIM_8232 2 2
Streptococcus_thermophilus_ND03 2 2
Streptococcus_thermophilus_CNRZ1066 2 2
Streptococcus_thermophilus_LMG_18311 2 2
Streptococcus_suis_T15 8 5
Streptococcus_suis_TL13 5 3
Streptococcus_suis_SC070731 8 5
Streptococcus_suis_S735 8 5
Streptococcus_suis_ST3 12 7
Streptococcus_suis_D9 10 6
Streptococcus_suis_SS12 8 5
Streptococcus_suis_D12 5 3
Streptococcus_suis_ST1 8 5
Streptococcus_suis_A7 8 5
Streptococcus_suis_JS14 8 5
Streptococcus_suis_BM407 8 5
Streptococcus_suis_SC84 8 5
Streptococcus_suis_GZ1 8 5
Streptococcus_suis_98HAH33 8 6
Streptococcus_suis_05ZYH33 8 5
Streptococcus_salivarius_CCHSS3 4 2
Streptococcus_salivarius_JIM8777 2 1
Exiguobacterium_antarcticum_B7 4 2
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_Tc-4-1 1 1
Thermobacillus_composti_KWC4 2 1
Paenibacillus_sp._Y412MC10 9 5
Paenibacillus_mucilaginosus_KNP414 5 3
Paenibacillus_mucilaginosus_K02 5 3
Paenibacillus_larvae_subsp._larvae_DSM_25430 10 7
Paenibacillus_polymyxa_CR1 36 18
Paenibacillus_polymyxa_SC2 21 11
Paenibacillus_polymyxa_E681 18 9
Listeria_monocytogenes_EGD_sequence 29 17
Listeria_monocytogenes_N53-1 27 19
Listeria_monocytogenes_La111 27 18
Listeria_monocytogenes_serotype_4b_str._LL195 27 16
Listeria_monocytogenes_07PF0776 26 15
Listeria_monocytogenes_M7 24 14
Listeria_monocytogenes_J1-220 27 16
Listeria_monocytogenes_J1816 18 11
Listeria_monocytogenes_SLCC2376 28 16
Listeria_monocytogenes_SLCC5850 29 17
Listeria_monocytogenes_ATCC_19117 27 16
Listeria_monocytogenes_L312 27 16
Listeria_monocytogenes_SLCC2479 29 17
Listeria_monocytogenes_SLCC7179 29 17
Listeria_monocytogenes_SLCC2540 27 16
Listeria_monocytogenes_SLCC2378 27 16
Listeria_monocytogenes_serotype_1/2b_str._SLCC2755 27 16
Listeria_monocytogenes_serotype_1/2c_str._SLCC2372 29 17
Listeria_monocytogenes_serotype_7_str._SLCC2482 27 16
Listeria_monocytogenes_08-5578 29 17
Listeria_monocytogenes_08-5923 29 17
Listeria_monocytogenes_L99 24 14
Listeria_monocytogenes_HCC23 24 14
Listeria_monocytogenes_10403S 29 17
Listeria_monocytogenes_J0161 29 17
Listeria_monocytogenes_Finland_1998 29 17
Listeria_monocytogenes_FSL_R2-561 29 17
Listeria_monocytogenes_serotype_4b_str._F2365 25 15
Listeria_monocytogenes_EGD-e 29 17
Geobacillus_sp._C56-T3 6 3
Geobacillus_sp._Y4.1MC1 12 6
Geobacillus_sp._Y412MC52 12 6
Geobacillus_sp._Y412MC61 12 6
Amphibacillus_xylanus_NBRC_15112 8 4
Bacillus_amyloliquefaciens_subsp._plantarum_sequencing 12 6
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5033 12 6
Bacillus_amyloliquefaciens_subsp._plantarum_AS43.3 12 6
Bacillus_amyloliquefaciens_subsp._plantarum_YAU_B9601-Y2 12 6
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5113 12 6
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5036 12 6
Bacillus_amyloliquefaciens_subsp._plantarum_CAU_B946 12 6
Bacillus_amyloliquefaciens_LFB112 10 5
Bacillus_amyloliquefaciens_CC178 12 6
Bacillus_amyloliquefaciens_Y2 12 6
Bacillus_amyloliquefaciens_IT-45 10 5
Bacillus_amyloliquefaciens_XH7 12 6
Bacillus_amyloliquefaciens_LL3 10 5
Bacillus_amyloliquefaciens_TA208 12 6
Bacillus_amyloliquefaciens_DSM_7 12 6
Bacillus_licheniformis_9945A 22 12
Bacillus_subtilis_PY79 16 8
Bacillus_subtilis_XF-1 16 8
Bacillus_subtilis_QB928 16 8
Bacillus_subtilis_BSn5 16 8
Bacillus_subtilis_subsp._subtilis_str._BAB-1 16 8
Bacillus_subtilis_subsp._subtilis_str._BSP1 16 8
Bacillus_subtilis_subsp._subtilis_str._RO-NN-1 14 7
Bacillus_subtilis_subsp._subtilis_6051-HGW 16 8
Bacillus_subtilis_subsp._spizizenii_TU-B-10 18 9
Bacillus_subtilis_subsp._spizizenii_str._W23 14 7
Bacillus_subtilis_subsp._natto_BEST195 17 9
Bacillus_licheniformis_DSM_13_=_ATCC_14580 20 11
Bacillus_infantis_NRRL_B-14911 7 4
Bacillus_cereus_subsp._cytotoxis_NVH_391-98 13 8
Bacillus_toyonensis_BCT-7112 8 4
Bacillus_thuringiensis_HD-771 6 3
Bacillus_thuringiensis_HD-789 6 3
Bacillus_thuringiensis_MC28 10 5
Bacillus_thuringiensis_serovar_chinensis_CT-43 8 4
Bacillus_thuringiensis_YBT-1518 8 4
Bacillus_thuringiensis_Bt407 8 4
Bacillus_thuringiensis_serovar_konkukian_str._97-27 8 4
Bacillus_thuringiensis_serovar_kurstaki_str._HD73 6 3
Bacillus_thuringiensis_BMB171 6 3
Bacillus_thuringiensis_serovar_finitimus_YBT-020 8 4
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 8 4
Bacillus_cereus_FRI-35 8 4
Bacillus_cereus_biovar_anthracis_str._CI 10 7
Bacillus_cereus_AH820 6 3
Bacillus_cereus_AH187 6 3
Bacillus_cereus_B4264 6 3
Bacillus_cereus_G9842 6 3
Bacillus_cereus_Q1 10 5
Bacillus_cereus_F837/76 8 4
Bacillus_cereus_NC7401 6 3
Bacillus_cereus_E33L 10 5
Bacillus_cereus_ATCC_14579 6 3
Bacillus_cereus_ATCC_10987 8 4
Bacillus_anthracis_str._H9401 10 7
Bacillus_anthracis_str._CDC_684 10 7
Bacillus_anthracis_str._'Ames_Ancestor' 9 6
Bacillus_anthracis_str._Sterne 6 3
Bacillus_anthracis_str._Ames 6 3
Bacillus_anthracis_str._A2012 3 3
Bacillus_megaterium_WSH-002 12 6
Bacillus_megaterium_QM_B1551 13 7
Bacillus_coagulans_36D1 11 7
Staphylococcus_aureus_subsp._aureus_MSHR1132 10 5
Staphylococcus_pseudintermedius_ED99 6 3
Staphylococcus_pasteuri_SP1 5 3
Staphylococcus_lugdunensis_N920143 4 3
Staphylococcus_warneri_SG1 4 2
Staphylococcus_epidermidis_ATCC_12228 3 2
Staphylococcus_aureus_CA-347 10 5
Staphylococcus_aureus_Bmb9393 10 5
Staphylococcus_aureus_M1 10 5
Staphylococcus_aureus_08BA02176 8 5
Staphylococcus_aureus_ST228/18412 10 5
Staphylococcus_aureus_ST228/18341 10 5
Staphylococcus_aureus_ST228/16125 10 5
Staphylococcus_aureus_ST228/16035 10 5
Staphylococcus_aureus_ST228/15532 10 5
Staphylococcus_aureus_ST228/10497 10 5
Staphylococcus_aureus_ST228/10388 10 5
Staphylococcus_aureus_04-02981 10 5
Staphylococcus_aureus_RF122 8 4
Staphylococcus_aureus_subsp._aureus_Z172 10 5
Staphylococcus_aureus_subsp._aureus_6850 10 5
Staphylococcus_aureus_subsp._aureus_SA957 10 5
Staphylococcus_aureus_subsp._aureus_CN1 10 5
Staphylococcus_aureus_subsp._aureus_SA40 10 5
Staphylococcus_aureus_subsp._aureus_11819-97 10 5
Staphylococcus_aureus_subsp._aureus_M013 10 5
Staphylococcus_aureus_subsp._aureus_HO_5096_0412 10 5
Staphylococcus_aureus_subsp._aureus_VC40 10 5
Staphylococcus_aureus_subsp._aureus_T0131 10 5
Staphylococcus_aureus_subsp._aureus_LGA251 10 5
Staphylococcus_aureus_subsp._aureus_ECT-R_2 10 5
Staphylococcus_aureus_subsp._aureus_JKD6159 10 5
Staphylococcus_aureus_subsp._aureus_ED133 10 5
Staphylococcus_aureus_subsp._aureus_ED98 10 5
Staphylococcus_aureus_subsp._aureus_TW20 10 5
Staphylococcus_aureus_subsp._aureus_55/2053 10 5
Staphylococcus_aureus_subsp._aureus_TCH60 10 5
Staphylococcus_aureus_subsp._aureus_str._JKD6008 10 5
Staphylococcus_aureus_subsp._aureus_71193 9 5
Staphylococcus_aureus_subsp._aureus_S0385 8 5
Staphylococcus_aureus_subsp._aureus_str._Newman 10 5
Staphylococcus_aureus_subsp._aureus_Mu3 10 5
Staphylococcus_aureus_subsp._aureus_USA300_TCH1516 10 5
Staphylococcus_aureus_subsp._aureus_USA300_FPR3757 10 5
Staphylococcus_aureus_subsp._aureus_JH9 10 5
Staphylococcus_aureus_subsp._aureus_MSSA476 10 5
Staphylococcus_aureus_subsp._aureus_MRSA252 8 4
Staphylococcus_aureus_subsp._aureus_MW2 10 5
Staphylococcus_aureus_subsp._aureus_N315 10 5
Staphylococcus_aureus_subsp._aureus_Mu50 10 5
Staphylococcus_aureus_subsp._aureus_COL 10 5
Staphylococcus_aureus_subsp._aureus_NCTC_8325 10 5
Brachyspira_pilosicoli_WesB 3 2
Brachyspira_pilosicoli_B2904 3 2
Brachyspira_pilosicoli_P43/6/78 2 1
Fusobacterium_nucleatum_subsp._vincentii_3_1_36A2 1 1
Fusobacterium_nucleatum_subsp._animalis_4_8 1 1
Mannheimia_succiniciproducens_MBEL55E 1 1
Bibersteinia_trehalosi_USDA-ARS-USMARC-192 2 1
Aggregatibacter_actinomycetemcomitans_ANH9381 1 1
Aggregatibacter_actinomycetemcomitans_D11S-1 1 1
Haemophilus_somnus_2336 1 1
Pasteurella_multocida_36950 1 1
Pasteurella_multocida_subsp._multocida_str._HN06 1 1
Pasteurella_multocida_subsp._multocida_str._Pm70 1 1
Haemophilus_influenzae_KR494 1 1
Haemophilus_influenzae_F3047 1 1
Haemophilus_influenzae_F3031 1 1
Haemophilus_influenzae_10810 1 1
Haemophilus_influenzae_PittGG 1 1
Haemophilus_influenzae_86-028NP 1 1
Haemophilus_influenzae_R2866 1 1
Haemophilus_influenzae_R2846 1 1
Haemophilus_influenzae_Rd_KW20 1 1
Actinobacillus_suis_H91-0380 2 1
Aeromonas_hydrophila_ML09-119 2 2
Vibrio_fischeri_ES114 3 2
Proteus_mirabilis_BB2000 2 1
Edwardsiella_tarda_C07-087 2 2
Edwardsiella_tarda_FL6-60 2 2
Rahnella_aquatilis_HX2 6 4
Yersinia_pseudotuberculosis_PB1/+ 1 1
Yersinia_pseudotuberculosis_YPIII 1 1
Yersinia_pseudotuberculosis_IP_32953 1 1
Yersinia_pestis_biovar_Microtus_str._91001 1 1
Yersinia_pestis_A1122 1 1
Yersinia_pestis_Z176003 1 1
Yersinia_pestis_D182038 1 1
Yersinia_pestis_D106004 1 1
Yersinia_pestis_biovar_Medievalis_str._Harbin_35 1 1
Yersinia_pestis_Nepal516 1 1
Yersinia_pestis_Antiqua 1 1
Yersinia_pestis_Angola 1 1
Yersinia_pestis_CO92 1 1
Yersinia_pestis_KIM10+ 1 1
Yersinia_enterocolitica_subsp._palearctica_105.5R(r) 5 5
Yersinia_enterocolitica_subsp._palearctica_Y11 5 5
Serratia_sp._AS13 7 5
Serratia_plymuthica_S13 7 5
Serratia_plymuthica_4Rx13 7 5
Serratia_marcescens_FGI94 5 4
Serratia_marcescens_WW4 5 4
Serratia_liquefaciens_ATCC_27592 8 6
Dickeya_dadantii_Ech586 4 2
Dickeya_dadantii_3937 4 2
Pectobacterium_carotovorum_subsp._carotovorum_PCC21 10 5
Pantoea_ananatis_LMG_5342 10 7
Pantoea_ananatis_PA13 12 8
Pantoea_ananatis_AJ13355 11 7
Erwinia_pyrifoliae_DSM_12163 3 3
Erwinia_amylovora_CFBP1430 3 3
Cronobacter_sakazakii_CMCC_45402 7 5
Cronobacter_sakazakii_SP291 5 4
Cronobacter_sakazakii_ATCC_BAA-894 5 4
Raoultella_ornithinolytica_B6 7 5
Shigella_sonnei_53G 4 3
Shigella_flexneri_2002017 4 3
Shigella_flexneri_2a_str._2457T 4 3
Shigella_flexneri_2a_str._301 4 3
Shigella_dysenteriae_1617 2 2
Shigella_boydii_Sb227 4 3
Salmonella_bongori_N268-08 8 6
Salmonella_enterica_subsp._arizonae_serovar_62:z4,z23:--_str._RSK2980 4 4
Salmonella_enterica_subsp._enterica_serovar_4,[5],12:i:-_str._08-1736 8 6
Salmonella_enterica_subsp._enterica_serovar_Javiana_str._CFSAN001992 6 4
Salmonella_enterica_subsp._enterica_serovar_Schwarzengrund_str._CVM19633 7 5
Salmonella_enterica_subsp._enterica_Serovar_Cubana_str._CFSAN002050 8 6
Salmonella_enterica_subsp._enterica_serovar_Enteritidis_str._P125109 7 5
Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67 6 4
Salmonella_enterica_subsp._enterica_serovar_Newport_str._USMARC-S3124.1 8 6
Salmonella_enterica_subsp._enterica_serovar_Newport_str._SL254 8 6
Salmonella_enterica_subsp._enterica_serovar_Dublin_str._CT_02021853 5 4
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_var._5-_str._CFSAN001921 8 6
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._U288 8 6
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._798 8 6
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._UK-1 8 6
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._ST4/74 8 6
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._T000240 8 6
Salmonella_enterica_The_genome_of__subsp._enterica_serovar_Typhimurium_str._DT2 8 6
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._D23580 8 6
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344 8 6
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._14028S 8 6
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 8 6
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_Definitive_Type_104 8 6
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._P-stx-12 6 4
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty21a 6 4
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18 4 3
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2 4 3
Salmonella_enterica_serovar_Bovismorbificans_genomics 7 5
Salmonella_enterica_subsp._enterica_serovar_Bareilly_str._CFSAN000189 7 5
Salmonella_enterica_subsp._enterica_serovar_Agona_str._24249 8 5
Salmonella_enterica_subsp._enterica_serovar_Agona_str._SL483 8 5
Salmonella_enterica_subsp._enterica_serovar_Weltevreden_str._2007-60-3289-1 8 6
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_B_str._SPB7 6 5
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._AKU_12601 6 4
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._ATCC_9150 6 4
Salmonella_enterica_subsp._enterica_Serovar_Heidelberg_str._CFSAN002069 8 6
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._B182 8 6
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._41578 8 6
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._SL476 7 5
Salmonella_enterica_subsp._enterica_serovar_Pullorum_str._S06004 7 5
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._CDC1983-67 7 5
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._RKS5078 7 5
Salmonella_enterica_subsp._enterica_serovar_Thompson_str._RM6836 7 5
Salmonella_enterica_subsp._enterica_serovar_Gallinarum_str._287/91 7 5
Klebsiella_oxytoca_KCTC_1686 14 9
Klebsiella_pneumoniae_JM45 6 5
Klebsiella_pneumoniae_CG43 7 6
Klebsiella_pneumoniae_KCTC_2242 7 6
Klebsiella_pneumoniae_342 8 6
Klebsiella_pneumoniae_subsp._pneumoniae_1084 7 6
Klebsiella_pneumoniae_subsp._pneumoniae_HS11286 7 6
Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578 7 6
Klebsiella_pneumoniae_subsp._rhinoscleromatis_SB3432 6 5
Enterobacter_aerogenes_EA1509E 9 6
Escherichia_coli_E24377A 6 4
Escherichia_coli_E._coli_PMV-1 8 5
Escherichia_coli_JJ1886 6 4
Escherichia_coli_LY180 4 3
Escherichia_coli_APEC_O78 4 3
Escherichia_coli_O7:K1_str._CE10 4 3
Escherichia_coli_O104:H4_str._2009EL-2050 4 4
Escherichia_coli_O104:H4_str._2009EL-2071 4 4
Escherichia_coli_O104:H4_str._2011C-3493 2 2
Escherichia_coli_NA114 6 4
Escherichia_coli_P12b 4 3
Escherichia_coli_str._'clone_D_i2' 8 5
Escherichia_coli_str._'clone_D_i14' 8 5
Escherichia_coli_UM146 5 3
Escherichia_coli_042 2 2
Escherichia_coli_Xuzhou21 1 1
Escherichia_coli_IHE3034 8 5
Escherichia_coli_UMNK88 4 3
Escherichia_coli_O83:H1_str._NRG_857C 8 5
Escherichia_coli_ABU_83972 8 5
Escherichia_coli_KO11FL 4 3
Escherichia_coli_KO11FL 4 3
Escherichia_coli_LF82 8 5
Escherichia_coli_ED1a 8 5
Escherichia_coli_IAI39 4 3
Escherichia_coli_UMN026 2 2
Escherichia_coli_55989 2 2
Escherichia_coli_S88 8 5
Escherichia_coli_IAI1 6 4
Escherichia_coli_W 4 3
Escherichia_coli_W 4 3
Escherichia_coli_DH1 4 3
Escherichia_coli_DH1 4 3
Escherichia_coli_ATCC_8739 4 3
Escherichia_coli_BL21(DE3) 4 3
Escherichia_coli_BL21(DE3) 4 3
Escherichia_coli_SMS-3-5 6 4
Escherichia_coli_SE15 8 5
Escherichia_coli_SE11 4 3
Escherichia_coli_APEC_O1 8 5
Escherichia_coli_O103:H2_str._12009 4 3
Escherichia_coli_UTI89 8 5
Escherichia_coli_536 8 5
Escherichia_coli_HS 3 2
Escherichia_coli_ETEC_H10407 4 3
Escherichia_coli_O55:H7_str._RM12579 1 1
Escherichia_coli_O55:H7_str._CB9615 1 1
Escherichia_coli_O26:H11_str._11368 8 5
Escherichia_coli_CFT073 8 5
Escherichia_coli_O111:H-_str._11128 8 5
Escherichia_coli_O127:H6_str._E2348/69 8 5
Escherichia_coli_O157:H7_str._TW14359 1 1
Escherichia_coli_O157:H7_str._EC4115 1 1
Escherichia_coli_O157:H7_str._Sakai 1 1
Escherichia_coli_O157:H7_str._EDL933 1 1
Escherichia_coli_str._K-12_substr._MDS42 4 3
Escherichia_coli_BW2952 4 3
Escherichia_coli_str._K-12_substr._MG1655 4 3
Escherichia_coli_str._K-12_substr._W3110 4 3
Escherichia_coli_str._K-12_substr._DH10B 4 3
Escherichia_coli_B_str._REL606 4 3
Enterobacter_cloacae_SCF1 7 7
Enterobacter_cloacae_EcWSU1 5 4
Enterobacter_cloacae_subsp._cloacae_ENHKU01 2 2
Enterobacter_cloacae_subsp._cloacae_NCTC_9394 2 2
Enterobacter_cloacae_subsp._cloacae_ATCC_13047 2 2

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Others
Genome     Number   Proteins
NCBI_plasmid_sequences_(Plasmids) 75 58
STRING_v9.0.5_(STRING) 2027 1258
Uniprot_2018_03_genome 43924 27162
NCBI_2017_08_genome 468741 296076
Protein_Data_Bank_(all_PDB_sequenc) 13 11
NCBI_viral_sequences_(Viral) 15 8
TargetDB__(Targets) 55 43
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 26 26
PDB_chains_(SCOP_1.75)_(PDB) 4 2

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.