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Domain combinations for Calcium-dependent phosphotriesterase superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Calcium-dependent phosphotriesterase domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   22 22
Pan_troglodytes_76_2.1.4   (Chimpanzee)   6 6
Gorilla_gorilla_76_3.1   (Western gorilla)   9 9
Pongo_abelii_76_2   (Sumatran orangutan)   10 10
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   9 9
Papio_anubis_76   (Olive baboon)   8 8
Macaca_mulatta_76_1   (Rhesus monkey)   9 9
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   16 16
Otolemur_garnettii_76_3   (Small-eared galago)   12 12
Microcebus_murinus_76_1   (Gray mouse lemur)   8 7
Rattus_norvegicus_76_5.0   (Norway rat)   13 13
Mus_musculus_76_38   (House mouse)   18 18
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   8 7
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   11 11
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   7 7
Cavia_porcellus_76_3   (Domestic guinea pig)   9 9
Oryctolagus_cuniculus_76_2   (Rabbit)   7 7
Ochotona_princeps_76   (American pika)   7 6
Tupaia_belangeri_76   (Northern tree shrew)   8 7
Sus_scrofa_76_10.2   (Pig)   13 13
Bos_taurus_76_3.1   (Cattle)   12 12
Ovis_aries_76_3.1   (Sheep)   7 7
Vicugna_pacos_76_1   (Alpaca)   11 10
Tursiops_truncatus_76_1   (Bottlenose dolphin)   12 12
Mustela_putorius_furo_76_1.0   (Domestic ferret)   8 8
Ailuropoda_melanoleuca_76_1   (Giant panda)   9 9
Canis_familiaris_76_3.1   (Dog)   13 13
Felis_catus_76_6.2   (Domestic cat)   7 7
Equus_caballus_76_2   (Horse)   11 11
Myotis_lucifugus_76_2.0   (Little brown bat)   8 8
Pteropus_vampyrus_76_1   (Large flying fox)   8 7
Sorex_araneus_76_1   (European shrew)   8 8
Erinaceus_europaeus_76   (Western European hedgehog)   8 6
Procavia_capensis_76_1   (Cape rock hyrax)   9 8
Loxodonta_africana_76_3   (African savanna elephant)   11 11
Echinops_telfairi_76   (Small Madagascar hedgehog)   7 7
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   11 11
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   6 6
Macropus_eugenii_76_1.0   (Tammar wallaby)   10 9
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   8 8
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   8 8
Ornithorhynchus_anatinus_76_5   (Platypus)   6 6
Saccoglossus_kowalevskii_v3.0 51 51
Petromyzon_marinus_76_7.0   (Sea lamprey)   5 5
Meleagris_gallopavo_76_2   (Turkey)   6 6
Gallus_gallus_76_4   (Chicken)   9 9
Anas_platyrhynchos_76_1.0   (Mallard)   5 5
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   6 6
Ficedula_albicollis_76_1.0   (Collared flycatcher)   7 7
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   7 7
Anolis_carolinensis_76_2.0   (Green anole)   10 10
Xenopus_laevis_   (African clawed frog)   10 10
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   9 9
Latimeria_chalumnae_76_1   (Coelacanth)   6 6
Lepisosteus_oculatus_76   (Spotted gar)   8 8
Gadus_morhua_76_1   (Atlantic cod)   6 6
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   7 7
Takifugu_rubripes_76_4   (Torafugu)   16 16
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   9 9
Oryzias_latipes_76_1   (Japanese medaka)   11 11
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   12 12
Poecilia_formosa_76   (Amazon molly)   9 9
Oreochromis_niloticus_76_1.0   (Nile tilapia)   9 9
Astyanax_mexicanus_76   (Mexican tetra)   5 5
Danio_rerio_76_9   (Zebrafish)   10 10
Oikopleura_dioica 4 4
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   12 12
Ciona_intestinalis_76   (Vase tunicate)   11 11
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   69 68
Adineta_vaga 126 120
Octopus_bimaculoides_280 23 23
Crassostrea_gigas_22   (Pacific oyster)   281 261
Lottia_gigantea_   (Owl limpet)   10 10
Helobdella_robusta_ 13 13
Capitella_sp._I_ 22 22
Danaus_plexippus_OGS1.0   (Monarch butterfly)   21 19
Heliconius_melpomene_   (Postman butterfly)   15 15
Bombyx_mori_   (Domestic silkworm)   18 18
Nasonia_vitripennis_   (Jewel wasp)   13 12
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   16 16
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   8 8
Linepithema_humile_v1.1   (Argentine ant)   7 7
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   7 7
Solenopsis_invicta_v.2.2.3   (Red fire ant)   8 8
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   8 8
Atta_cephalotes_v1.1 8 7
Camponotus_floridanus_v3.3   (Florida carpenter ant)   9 9
Lucilia_cuprina   (Australian sheep blowfly)   9 8
Drosophila_grimshawi_1.3 6 6
Drosophila_willistoni_1.3 9 8
Drosophila_pseudoobscura_2.13 10 10
Drosophila_persimilis_1.3 12 12
Drosophila_suzukii 11 8
Drosophila_yakuba_1.3 9 9
Drosophila_simulans_1.3 8 8
Drosophila_sechellia_1.3 8 8
Drosophila_melanogaster_76_5   (Fruit fly)   17 17
Drosophila_erecta_1.3 9 9
Drosophila_ananassae_1.3 10 9
Drosophila_virilis_1.2 4 4
Drosophila_mojavensis_1.3 6 6
Megaselia_scalaris_22 4 4
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   18 18
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   11 10
Anopheles_darlingi_22   (American malaria mosquito)   12 12
Anopheles_gambiae_49_3j   (African malaria mosquito)   11 11
Tribolium_castaneum_3.0   (Red flour beetle)   16 16
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   7 7
Acyrthosiphon_pisum_   (Pea aphid)   6 6
Rhodnius_prolixus_22 5 5
Daphnia_pulex_   (Common water flea)   3 3
Strigamia_maritima_22 9 5
Sarcoptes_scabiei 7 7
Tetranychus_urticae_   (Two-spotted spider mite)   9 9
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   12 10
Pristionchus_pacificus_ 14 14
Meloidogyne_incognita_   (Southern root-knot nematode)   3 3
Meloidogyne_hapla_ 3 3
Onchocerca_volvulus_22 7 7
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   6 6
Caenorhabditis_japonica_ 58 15
Caenorhabditis_brenneri_ 34 15
Caenorhabditis_remanei_ 29 11
Caenorhabditis_elegans_76_235   (Roundworm)   60 18
Caenorhabditis_briggsae_2 33 15
Trichinella_spiralis_22 2 2
Echinococcus_multilocularis_ 2 2
Echinococcus_granulosus_ 3 3
Taenia_solium_   (Pork tapeworm)   3 3
Schistosoma_mansoni_ 6 6
Mnemiopsis_leidyi   (Sea walnut)   13 13
Thelohanellus_kitauei 1 1
Acropora_digitifera_v1.0 21 21
Nematostella_vectensis_1.0   (Starlet sea anemone)   11 11
Hydra_vulgaris 8 8
Amphimedon_queenslandica 69 66
Trichoplax_adhaerens_ 5 5
Proterospongia_sp._ATCC_50818_ 36 35
Monosiga_brevicollis_ 5 5
Sphaeroforma_arctica_JP610_ 3 3
Capsaspora_owczarzaki_ATCC_30864_ 2 2
Conidiobolus_coronatus_NRRL28638_v1.0 12 12
Mortierella_verticillata_NRRL_6337_ 5 5
Phycomyces_blakesleeanus_ 3 3
Rhizopus_oryzae_RA_99-880_ 4 4
Mucor_circinelloides_ 2 2
Rhizomucor_miehei_CAU432_ 3 3
Sporisorium_reilianum_22 3 3
Ustilago_maydis_ 3 3
Mixia_osmundae_IAM_14324_v1.0 3 3
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 3 3
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 4 4
Melampsora_laricis-populina_ 4 4
Rhodotorula_graminis_WP1_v1.0 6 6
Sporobolomyces_roseus_IAM_13481_ 4 4
Microbotryum_violaceum_22 4 4
Wallemia_sebi_v1.0 3 3
Sphaerobolus_stellatus_v1.0 18 18
Piloderma_croceum_F_1598_v1.0 13 13
Serpula_lacrymans_var._lacrymans_S7.9_ 3 3
Coniophora_puteana 9 9
Hydnomerulius_pinastri_v2.0 6 6
Paxillus_rubicundulus_Ve08.2h10_v1.0 4 4
Pisolithus_microcarpus_441_v1.0 4 4
Pisolithus_tinctorius_Marx_270_v1.0 7 7
Scleroderma_citrinum_Foug_A_v1.0 3 3
Coprinopsis_cinerea_okayama7_130_v3 5 5
Pleurotus_ostreatus_   (Oyster mushroom)   10 10
Amanita_thiersii_Skay4041_v1.0 7 7
Amanita_muscaria_Koide_v1.0   (Fly agaric)   10 10
Galerina_marginata_v1.0 11 11
Hebeloma_cylindrosporum_h7_v2.0 6 6
Laccaria_bicolor_S238N-H82_ 5 5
Agaricus_bisporus_var._bisporus_ 6 6
Schizophyllum_commune_ 11 11
Stereum_hirsutum_FP-91666_SS1__v1.0 9 9
Heterobasidion_annosum_ 3 3
Gloeophyllum_trabeumv1.0 9 9
Punctularia_strigosozonata_v1.0 5 5
Sebacina_vermifera_MAFF_305830_v1.0 6 6
Fomitiporia_mediterranea_v1.0 7 7
Tulasnella_calospora_AL13/4D_v1.0 3 3
Postia_placenta_ 9 9
Wolfiporia_cocos_MD-104_SS10__v1.0 8 8
Fomitopsis_pinicolav1.0 8 8
Fomitopsis_pinicola_FP-58527_SS1_v3.0 7 7
Phanerochaete_chrysosporium_RP-78_2.1 2 2
Dichomitus_squalens 3 3
Trametes_versicolor_v1.0 3 3
Tremella_mesenterica_   (Witches' butter)   4 4
Daldinia_eschscholzii_EC12_v1.0 9 9
Apiospora_montagnei_NRRL_25634_v1.0 16 16
Magnaporthe_poae_ATCC_64411_22 8 8
Magnaporthe_grisea_70-15_ 9 9
Podospora_anserina_ 10 10
Sporotrichum_thermophile_ATCC_42464_ 4 4
Thielavia_terrestris_NRRL_8126_ 6 6
Chaetomium_globosum_CBS_148.51_ 9 9
Neurospora_tetrasperma_ 4 4
Neurospora_discreta_FGSC_8579_ 5 5
Neurospora_crassa_OR74A_ 7 7
Cryphonectria_parasitica_   (Chestnut blight fungus)   20 20
Verticillium_albo-atrum_VaMs.102_ 6 5
Verticillium_dahliae_VdLs.17_ 6 6
Acremonium_alcalophilumv_1.0 2 2
Glomerella_graminicola_22 10 10
Fusarium_graminearum_ 15 15
Nectria_haematococca_mpVI_ 21 21
Fusarium_oxysporum_f._sp._lycopersici_4286_ 17 17
Fusarium_verticillioides_7600_ 14 14
Trichoderma_asperellum_CBS_433.97_v1.0 7 7
Trichoderma_atroviride_ 11 11
Trichoderma_citrinoviride_v1.0 7 7
Trichoderma_reesei_1.2 6 6
Trichoderma_virens_Gv29-8_ 14 14
Trichoderma_longibrachiatum_ATCC_18648_v1.0 5 5
Trichoderma_harzianum_CBS_226.95_v1.0 19 19
Amorphotheca_resinae_v1.0   (Creosote fungus)   10 10
Botrytis_cinerea_B05.10_ 15 15
Sclerotinia_sclerotiorum_ 8 8
Blumeria_graminis_22 2 2
Didymella_exigua_CBS_183.55_v1.0 10 10
Leptosphaeria_maculans_22 6 6
Setosphaeria_turcica_v1.0 5 5
Cochliobolus_miyabeanus_ATCC_44560_v1.0 9 9
Cochliobolus_victoriae_FI3_v1.0 11 11
Cochliobolus_carbonum_26-R-13_v1.0 8 8
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   6 6
Alternaria_brassicicola_ 9 9
Cochliobolus_lunatus_m118_v2.0 11 11
Pyrenophora_teres_f._teres_22 9 9
Pyrenophora_tritici-repentis_ 8 8
Stagonospora_nodorum_ 11 11
Mycosphaerella_graminicola_IPO323_ 14 14
Zasmidium_cellare_ATCC_36951_v1.0 40 40
Dothistroma_septosporum 16 15
Septoria_musiva_v1.0 10 10
Mycosphaerella_fijiensis_CIRAD86_ 13 13
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 9 8
Paracoccidioides_brasiliensis_Pb18_ 2 2
Coccidioides_posadasii_RMSCC_3488_ 2 2
Coccidioides_immitis_RS_ 2 2
Ajellomyces_dermatitidis_SLH14081_ 4 4
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 3 3
Microsporum_canis_CBS_113480_ 3 3
Trichophyton_equinum_CBS_127.97_ 1 1
Trichophyton_verrucosum_HKI_0517_ 2 2
Arthroderma_benhamiae_CBS_112371_ 2 2
Trichophyton_tonsurans_CBS_112818_ 2 2
Trichophyton_rubrum_CBS_118892_ 2 2
Uncinocarpus_reesii_1704_ 2 2
Aspergillus_zonatus_v1.0 13 13
Penicillium_chrysogenum_Wisconsin_54-1255_ 7 7
Penicillium_chrysogenum_v1.0 8 8
Aspergillus_acidus_v1.0 13 13
Aspergillus_fumigatus_Af293 9 9
Aspergillus_brasiliensis_v1.0 11 11
Aspergillus_nidulans_FGSC_A4_ 7 7
Aspergillus_sydowii_v1.0 18 18
Aspergillus_versicolor_v1.0 17 17
Aspergillus_glaucus 16 16
Aspergillus_carbonarius_ITEM_5010_ 9 9
Neosartorya_fischeri_NRRL_181_ 9 9
Aspergillus_terreus_NIH2624_ 7 7
Aspergillus_tubingensis_v1.0 13 13
Aspergillus_wentii_v1.0 14 14
Aspergillus_oryzae_RIB40_ 18 18
Aspergillus_niger_22 15 14
Aspergillus_niger_ATCC_1015_ 10 10
Aspergillus_flavus_NRRL3357_ 17 17
Aspergillus_clavatus_NRRL_1_ 5 5
Penicillium_marneffei_ATCC_18224_ 8 8
Tuber_melanosporum_Mel28_22 6 6
Tuber_melanosporum_Vittad_   (Perigord truffle)   6 6
Hansenula_polymorpha_v2.0 2 2
Dekkera_bruxellensis_CBS_2499_v2.0 3 3
Pichia_membranifaciensv1.0 1 1
Candida_tanzawaensis_NRRL_Y-17324__v1.0 1 1
Candida_dubliniensis_CD36_ 1 1
Candida_tropicalis_MYA-3404_ 1 1
Candida_parapsilosis_ 1 1
Candida_albicans_SC5314 1 1
Lodderomyces_elongisporus_NRRL_YB-4239_ 1 1
Babjeviella_inositovora_NRRL_Y-12698_v1.0 5 5
Pichia_stipitis_CBS_6054_ 2 2
Candida_guilliermondii_ATCC_6260_ 4 4
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 2 2
Debaromyces_hansenii 2 2
Wickerhamomyces_anomalus 1 1
Pichia_pastoris_GS115_ 2 2
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 1 1
Yarrowia_lipolytica_CLIB122 4 4
Candida_lusitaniae_ATCC_42720_ 1 1
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 1 1
Vanderwaltozyma_polyspora_DSM_70294_ 1 1
Candida_glabrata_CBS138 1 1
Kluyveromyces_thermotolerans_CBS_6340 1 1
Lachancea_kluyveri_ 1 1
Kluyveromyces_waltii 1 1
Ashbya_gossypii_ATCC_10895_ 1 1
Zygosaccharomyces_rouxii_ 2 2
Saccharomyces_mikatae_MIT 1 1
Saccharomyces_paradoxus_MIT 2 2
Saccharomyces_cerevisiae_76   (Baker's yeast)   2 2
Saccharomyces_bayanus_MIT 2 2
Kluyveromyces_lactis 1 1
Schizosaccharomyces_cryophilus_OY26_22 2 2
Catenaria_anguillulae_PL171_v1.0 3 3
Allomyces_macrogynus_ATCC_38327_ 10 10
Spizellomyces_punctatus_DAOM_BR117_ 5 5
Dictyostelium_discoideum 4 4
Dictyostelium_purpureum_ 3 3
Entamoeba_dispar_1.2 2 2
Entamoeba_invadens_1.2 1 1
Entamoeba_histolytica_1 4 4
Selaginella_moellendorffii_ 23 23
Pinus_taeda   (Loblolly pine)   19 19
Picea_abies   (Norway spruce)   15 15
Eucalyptus_grandis_v201   (Rose gum)   32 32
Theobroma_cacao_B97-61/B2_v1   (Cacao)   21 21
Gossypium_raimondii_v221 37 37
Citrus_clementina_v165 36 36
Citrus_sinensis_v154   (Sweet orange)   33 33
Thellungiella_halophila_v173 19 18
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   28 27
Capsella_rubella_v183 21 20
Arabidopsis_lyrata_   (Lyrate rockcress)   19 19
Arabidopsis_thaliana_10   (Thale cress)   23 23
Carica_papaya_   (Papaya)   11 10
Medicago_truncatula_   (Barrel medic)   32 32
Phaseolus_vulgaris_v186   (French bean)   13 13
Glycine_max_v109   (Soybean)   26 25
Cucumis_sativus_v122   (Cucumber)   11 11
Fragaria_vesca_   (Wild strawberry)   19 16
Malus_domestica_v196   (Apple)   27 27
Prunus_persica_v139   (Peach)   9 9
Linum_usitatissimum_v200   (Flax)   26 23
Manihot_esculenta_v147   (Cassava)   18 17
Populus_trichocarpa_v156   (Black cottonwood)   18 18
Vitis_vinifera_   (Wine grape)   42 36
Mimulus_guttatus_v140   (Spotted monkey flower)   16 16
Solanum_lycopersicum_v.2.3   (Tomato)   17 17
Solanum_tuberosum_   (Potato)   30 29
Actinidia_chinensis_Hongyang_ 20 20
Aquilegia_coerulea_v195 21 21
Triticum_urartu_22 20 20
Triticum_aestivum_22   (Bread wheat)   68 68
Aegilops_tauschii_22 36 36
Brachypodium_distachyon_   (Stiff brome)   22 22
Oryza_barthii_22   (African wild rice)   26 23
Oryza_meridionalis_22 27 25
Oryza_glumaepatula_22 26 26
Oryza_glaberrima   (African rice)   18 18
Oryza_punctata_22 31 29
Oryza_nivara_22 31 28
Oryza_brachyantha_22   (Malo sina)   19 19
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   32 32
Oryza_sativa_v193   (Rice)   32 32
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   14 14
Panicum_virgatum_v202   (Switchgrass)   53 53
Setaria_italica_v164   (Foxtail millet)   44 44
Zea_mays_subsp._mays_   (Maize)   29 29
Zea_mays_v181   (Maize)   33 32
Sorghum_bicolor_   (Sorghum)   26 26
Musa_balbisiana   (Balbis banana)   12 12
Musa_acuminata_22   (Wild Malaysian banana)   10 10
Amborella_trichopoda_22 8 8
Physcomitrella_patens 20 20
Coccomyxa_subellipsoidea_sp._C-169_v2 5 5
Asterochloris_sp._Cgr/DA1pho_v1.0 6 6
Chlorella_variabilis_sp._NC64A_ 5 5
Chlorella_vulgaris_ 6 6
Volvox_carteri_f._nagariensis_ 5 5
Volvox_carteri_v199 4 4
Chlamydomonas_reinhardtii_4.0 8 8
Ostreococcus_sp._RCC809_ 1 1
Ostreococcus_lucimarinus_CCE9901_ 4 4
Ostreococcus_tauri_ 2 2
Bathycoccus_prasinos_ 2 2
Micromonas_sp._RCC299_ 3 3
Micromonas_pusilla_CCMP1545_v3.0 5 5
Cyanidioschyzon_merolae_strain_10D_22 2 2
Cyanidioschyzon_merolae 2 2
Porphyridium_purpureum_02_2012 5 5
Thecamonas_trahens_ATCC_50062_ 12 12
Bigelowiella_natans_CCMP2755_22 35 35
Cyanophora_paradoxa_ 12 12
Leishmania_mexicana_2.4 1 1
Leishmania_major_strain_Friedlin_ 1 1
Leishmania_infantum_JPCM5_2.4 4 4
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 2 2
Trypanosoma_vivax_ 4 4
Trypanosoma_cruzi_strain_CL_Brener 2 2
Trypanosoma_congolense_2.4 2 2
Trypanosoma_brucei_gambiense_v4.1 1 1
Trypanosoma_brucei_TREU927_v4.1 1 1
Ectocarpus_siliculosus 10 10
Aureococcus_anophagefferens_ 11 10
Albugo_laibachii_22 4 4
Pythium_iwayamai_DAOM_BR242034_22 9 8
Pythium_arrhenomanes_ATCC_12531_22 7 7
Pythium_ultimum_v1.7-2 6 6
Pythium_aphanidermatum_DAOM_BR444_22 10 10
Pythium_irregulare_DAOM_BR486_22 3 3
Pythium_vexans_DAOM_BR484_22 6 6
Phytophthora_ramorum_1.1   (Sudden oak death agent)   9 8
Phytophthora_sojae_1.1 14 12
Phytophthora_infestans_T30-4_ 10 10
Phytophthora_capsici_ 19 16
Hyaloperonospora_arabidopsidis_22 3 3
Phaeodactylum_tricornutumCCAP_1055/1 6 6
Fragilariopsis_cylindrus 11 11
Thalassiosira_pseudonana_CCMP1335 7 7
Perkinsus_marinus_ATCC_50983_ 9 9
Paramecium_tetraurelia_ 13 13
Tetrahymena_thermophila_SB210_1_ 9 9
Ichthyophthirius_multifiliis_strain_G5_ 2 2
Neospora_caninum 1 1
Toxoplasma_gondii_VEG 2 2
Toxoplasma_gondii_ME49 1 1
Toxoplasma_gondii_GT1 1 1
Babesia_bovis_T2Bo_ 2 2
Plasmodium_falciparum_3D7_ 1 1
Plasmodium_vivax_SaI-1_7.0 1 1
Plasmodium_knowlesi_strain_H_ 2 2
Plasmodium_yoelii_ssp._yoelii_1_ 1 1
Plasmodium_chabaudi_ 1 1
Plasmodium_berghei_ANKA_ 1 1
Symbiodinium_minutum_clade_B1_v1.2 44 40
Naegleria_gruberi_ 92 78
Trichomonas_vaginalis_ 1 1
Guillardia_theta_CCMP2712_v1.0_ 11 10
Emiliania_huxleyi_CCMP1516_ 45 45
Thermobaculum_terrenum_ATCC_BAA-798 5 5
Leptolyngbya_sp._PCC_7376 3 3
Pseudanabaena_sp._PCC_7367 2 2
Acaryochloris_marina_MBIC11017 4 4
Synechocystis_sp._PCC_6803 2 2
Thermosynechococcus_sp._NK55 3 3
Thermosynechococcus_elongatus_BP-1 1 1
Synechococcus_sp._PCC_7502 2 2
Synechococcus_sp._PCC_6312 2 2
Synechococcus_sp._CC9311 4 4
Microcoleus_sp._PCC_7113 8 5
Trichodesmium_erythraeum_IMS101 2 2
Cyanothece_sp._PCC_8802 5 5
Gloeocapsa_sp._PCC_7428 5 5
Microcystis_aeruginosa_NIES-843 2 2
Gloeobacter_violaceus_PCC_7421 16 16
Rivularia_sp._PCC_7116 6 6
Calothrix_sp._PCC_7507 3 2
Anabaena_variabilis_ATCC_29413 7 6
'Nostoc_azollae'_0708 2 1
Nostoc_sp._PCC_7107 1 1
Nostoc_punctiforme_PCC_73102 13 12
Nostoc_sp._PCC_7120 8 7
Nostoc_sp._PCC_7524 8 7
Conexibacter_woesei_DSM_14684 12 11
Rubrobacter_xylanophilus_DSM_9941 1 1
Ilumatobacter_coccineus 2 2
Acidimicrobium_ferrooxidans_DSM_10331 2 2
Thermobispora_bispora_DSM_43833 3 3
Nakamurella_multipartita_DSM_44233 1 1
Acidothermus_cellulolyticus_11B 3 3
Modestobacter_marinus 2 2
Blastococcus_saxobsidens_DD2 1 1
Geodermatophilus_obscurus_DSM_43160 4 4
Kineococcus_radiotolerans_SRS30216 6 6
Catenulispora_acidiphila_DSM_44928 6 6
Stackebrandtia_nassauensis_DSM_44728 7 7
Frankia_symbiont_of_Datisca_glomerata 3 3
Frankia_sp._EAN1pec 10 9
Frankia_alni_ACN14a 2 2
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 3 3
Thermomonospora_curvata_DSM_43183 2 2
Streptosporangium_roseum_DSM_43021 8 7
Kitasatospora_setae_KM-6054 4 4
Streptomyces_coelicolor_A3(2) 8 8
Streptomyces_sp._PAMC26508 9 8
Streptomyces_flavogriseus_ATCC_33331 9 9
Streptomyces_sp._SirexAA-E 5 5
Streptomyces_griseus_subsp._griseus_NBRC_13350 8 7
Streptomyces_bingchenggensis_BCW-1 13 11
Streptomyces_violaceusniger_Tu_4113 10 9
Streptomyces_avermitilis_MA-4680 5 5
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 3 2
Streptomyces_scabiei_87.22 9 9
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 9 9
Actinosynnema_mirum_DSM_43827 9 9
Saccharomonospora_viridis_DSM_43017 3 3
Pseudonocardia_dioxanivorans_CB1190 7 7
Saccharopolyspora_erythraea_NRRL_2338 11 11
Amycolatopsis_mediterranei_U32 11 10
Kribbella_flavida_DSM_17836 7 7
Nocardioides_sp._JS614 4 4
Propionibacterium_propionicum_F0230a 2 2
Propionibacterium_acnes_SK137 2 2
Microlunatus_phosphovorus_NM-1 6 6
Salinispora_arenicola_CNS-205 3 3
Salinispora_tropica_CNB-440 2 2
Verrucosispora_maris_AB-18-032 3 3
Micromonospora_sp._L5 10 9
Micromonospora_aurantiaca_ATCC_27029 7 7
Actinoplanes_sp._N902-109 10 10
Actinoplanes_sp._SE50/110 8 8
Actinoplanes_missouriensis_431 7 7
Tsukamurella_paurometabola_DSM_20162 5 5
Gordonia_sp._KTR9 3 3
Gordonia_polyisoprenivorans_VH2 3 3
Gordonia_bronchialis_DSM_43247 2 2
Rhodococcus_jostii_RHA1 11 11
Rhodococcus_equi_103S 5 5
Rhodococcus_opacus_B4 7 6
Rhodococcus_erythropolis_PR4 6 6
Nocardia_cyriacigeorgica_GUH-2 8 8
Nocardia_farcinica_IFM_10152 3 3
Amycolicicoccus_subflavus_DQS3-9A1 2 2
Mycobacterium_abscessus_ATCC_19977 3 3
Mycobacterium_sp._JLS 7 6
Mycobacterium_intracellulare_ATCC_13950 3 3
Mycobacterium_avium_104 3 3
Mycobacterium_vanbaalenii_PYR-1 4 4
Mycobacterium_canettii_CIPT_140010059 1 1
Mycobacterium_africanum_GM041182 1 1
Mycobacterium_tuberculosis_KZN_1435 1 1
Mycobacterium_tuberculosis 1 1
Mycobacterium_bovis_BCG_str._Pasteur_1173P2 1 1
Mycobacterium_rhodesiae_NBB3 7 7
Mycobacterium_ulcerans_Agy99 3 2
Mycobacterium_gilvum_PYR-GCK 8 6
Mycobacterium_chubuense_NBB4 7 7
Mycobacterium_marinum_M 6 5
Mycobacterium_smegmatis_str._MC2_155 10 8
Corynebacterium_resistens_DSM_45100 1 1
Corynebacterium_aurimucosum_ATCC_700975 1 1
Corynebacterium_kroppenstedtii_DSM_44385 1 1
Corynebacterium_efficiens_YS-314 1 1
Corynebacterium_ulcerans_0102 1 1
Corynebacterium_urealyticum_DSM_7109 5 5
Corynebacterium_jeikeium_K411 3 3
Corynebacterium_variabile_DSM_44702 4 4
Corynebacterium_pseudotuberculosis_316 2 2
Corynebacterium_glutamicum_R 1 1
Sanguibacter_keddieii_DSM_10542 3 3
Kytococcus_sedentarius_DSM_20547 2 2
Beutenbergia_cavernae_DSM_12333 6 6
Microbacterium_testaceum_StLB037 4 4
Clavibacter_michiganensis_subsp._michiganensis_NCPPB_382 3 3
Intrasporangium_calvum_DSM_43043 3 3
Brachybacterium_faecium_DSM_4810 2 2
Isoptericola_variabilis_225 1 1
Xylanimonas_cellulosilytica_DSM_15894 3 2
Cellulomonas_flavigena_DSM_20109 3 3
Cellulomonas_fimi_ATCC_484 1 1
Arthrobacter_phenanthrenivorans_Sphe3 4 4
Arthrobacter_chlorophenolicus_A6 2 2
Arthrobacter_aurescens_TC1 2 2
Arthrobacter_arilaitensis_Re117 2 2
Kocuria_rhizophila_DC2201 2 2
Rothia_mucilaginosa_DY-18 2 2
Rothia_dentocariosa_ATCC_17931 1 1
Arthrobacter_sp._Rue61a 3 3
Arthrobacter_sp._FB24 3 3
Micrococcus_luteus_NCTC_2665 2 2
Mobiluncus_curtisii_ATCC_43063 1 1
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 13 10
Dehalococcoides_sp._BAV1 3 1
Dehalogenimonas_lykanthroporepellens_BL-DC-9 2 2
Anaerolinea_thermophila_UNI-1 3 1
Thermomicrobium_roseum_DSM_5159 3 3
Herpetosiphon_aurantiacus_DSM_785 9 7
Roseiflexus_sp._RS-1 6 6
Roseiflexus_castenholzii_DSM_13941 5 5
Chloroflexus_sp._MS-G 4 4
Chloroflexus_sp._Y-400-fl 3 3
Chloroflexus_aggregans_DSM_9485 7 7
Chloroflexus_aurantiacus_J-10-fl 3 3
Truepera_radiovictrix_DSM_17093 3 3
Deinococcus_gobiensis_I-0 4 4
Deinococcus_deserti_VCD115 3 3
Deinococcus_maricopensis_DSM_21211 2 2
Deinococcus_geothermalis_DSM_11300 1 1
Deinococcus_proteolyticus_MRP 3 3
Deinococcus_radiodurans_R1 3 3
Meiothermus_silvanus_DSM_9946 3 3
Meiothermus_ruber_DSM_1279 3 3
Selenomonas_sputigena_ATCC_35185 1 1
Symbiobacterium_thermophilum_IAM_14863 1 1
Clostridium_clariflavum_DSM_19732 2 2
Clostridium_cellulolyticum_H10 2 1
Clostridium_thermocellum_ATCC_27405 3 3
Faecalibacterium_prausnitzii 1 1
Ruminococcus_sp. 1 1
Ruminococcus_albus_7 3 1
Sulfobacillus_acidophilus_DSM_10332 1 1
Thermincola_potens_JR 2 2
Desulfosporosinus_acidiphilus_SJ4 1 1
Desulfitobacterium_dehalogenans_ATCC_51507 4 4
Desulfotomaculum_reducens_MI-1 2 2
Desulfotomaculum_kuznetsovii_DSM_6115 2 2
Desulfotomaculum_carboxydivorans_CO-1-SRB 1 1
Desulfotomaculum_ruminis_DSM_2154 1 1
Acetobacterium_woodii_DSM_1030 1 1
Eubacterium_limosum_KIST612 1 1
Clostridium_sticklandii_DSM_519 2 2
Clostridium_saccharolyticum_WM1 1 1
Clostridium_phytofermentans_ISDg 1 1
Clostridium_lentocellum_DSM_5427 1 1
Coprococcus_sp._ART55/1 4 2
Butyrivibrio_proteoclasticus_B316 3 2
Butyrivibrio_fibrisolvens 1 1
Syntrophomonas_wolfei_subsp._wolfei_str._Goettingen 2 1
Alkaliphilus_oremlandii_OhILAs 1 1
Clostridium_sp._BNL1100 2 1
Clostridium_kluyveri_DSM_555 1 1
Clostridium_beijerinckii_NCIMB_8052 2 2
Clostridium_perfringens_ATCC_13124 3 1
Clostridium_cellulovorans_743B 4 2
Caldicellulosiruptor_kronotskyensis_2002 1 1
Caldicellulosiruptor_saccharolyticus_DSM_8903 2 1
Caldicellulosiruptor_bescii_DSM_6725 2 1
Thermodesulfobium_narugense_DSM_14796 1 1
Lactococcus_garvieae_ATCC_49156 1 1
Streptococcus_equi_subsp._equi_4047 1 1
Exiguobacterium_sp._MH3 1 1
Exiguobacterium_sp._AT1b 1 1
Exiguobacterium_sibiricum_255-15 1 1
Brevibacillus_brevis_NBRC_100599 2 2
Paenibacillus_sp._JDR-2 2 2
Paenibacillus_terrae_HPL-003 1 1
Paenibacillus_mucilaginosus_3016 5 5
Paenibacillus_polymyxa_M1 2 2
Bacillus_selenitireducens_MLS10 1 1
Solibacillus_silvestris_StLB046 2 2
Lysinibacillus_sphaericus_C3-41 1 1
Oceanobacillus_iheyensis_HTE831 1 1
Geobacillus_kaustophilus_HTA426 1 1
Geobacillus_sp._GHH01 1 1
Halobacillus_halophilus_DSM_2266 1 1
Bacillus_sp._JS 3 3
Bacillus_amyloliquefaciens_FZB42 2 2
Bacillus_atrophaeus_1942 1 1
Bacillus_subtilis_subsp._subtilis_str._168 1 1
Bacillus_halodurans_C-125 1 1
Bacillus_weihenstephanensis_KBAB4 1 1
Bacillus_thuringiensis_str._Al_Hakam 1 1
Bacillus_cereus_03BB102 1 1
Bacillus_clausii_KSM-K16 2 2
Bacillus_cellulosilyticus_DSM_2522 2 2
Bacillus_megaterium_DSM_319 2 2
Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305 1 1
Staphylococcus_lugdunensis_HKU09-01 1 1
Staphylococcus_haemolyticus_JCSC1435 1 1
Staphylococcus_epidermidis_RP62A 1 1
Staphylococcus_aureus_subsp._aureus_JH1 1 1
Staphylococcus_aureus 1 1
Candidatus_Cloacamonas_acidaminovorans 2 2
Gemmatimonas_aurantiaca_T-27 12 9
Melioribacter_roseus_P3M 14 7
Ignavibacterium_album_JCM_16511 25 15
Chlorobium_phaeobacteroides_DSM_266 1 1
Chloroherpeton_thalassium_ATCC_35110 6 3
Haliscomenobacter_hydrossis_DSM_1100 44 31
Saprospira_grandis_str._Lewin 3 3
Niastella_koreensis_GR20-10 57 36
Chitinophaga_pinensis_DSM_2588 40 25
Salinibacter_ruber_M8 8 4
Rhodothermus_marinus_DSM_4252 16 11
Flexibacter_litoralis_DSM_6794 45 22
Belliella_baltica_DSM_15883 17 12
Cyclobacterium_marinum_DSM_745 20 19
Marivirga_tractuosa_DSM_4126 14 10
Fibrella_aestuarina 32 20
Leadbetterella_byssophila_DSM_17132 27 14
Dyadobacter_fermentans_DSM_18053 52 34
Cytophaga_hutchinsonii_ATCC_33406 9 8
Spirosoma_linguale_DSM_74 56 35
Runella_slithyformis_DSM_19594 21 17
Parabacteroides_distasonis_ATCC_8503 12 9
Tannerella_forsythia_ATCC_43037 13 7
Paludibacter_propionicigenes_WB4 15 10
Odoribacter_splanchnicus_DSM_20712 5 3
Bacteroides_sp._CF50 1 1
Prevotella_melaninogenica_ATCC_25845 1 1
Prevotella_intermedia_17 1 1
Prevotella_denticola_F0289 5 5
Prevotella_ruminicola_23 30 14
Porphyromonas_asaccharolytica_DSM_20707 2 2
Alistipes_finegoldii_DSM_17242 6 4
Bacteroides_salanitronis_DSM_18170 35 17
Bacteroides_helcogenes_P_36-108 22 11
Bacteroides_vulgatus_ATCC_8482 48 25
Bacteroides_thetaiotaomicron_VPI-5482 71 39
Bacteroides_fragilis_YCH46 23 15
Pedobacter_saltans_DSM_12145 28 16
Solitalea_canadensis_DSM_3403 10 6
Pedobacter_heparinus_DSM_2366 26 15
Sphingobacterium_sp._21 24 12
Fluviicola_taffensis_DSM_16823 15 11
Owenweeksia_hongkongensis_DSM_17368 6 5
Zunongwangia_profunda_SM-A87 15 11
Krokinobacter_sp._4H-3-7-5 2 2
Gramella_forsetii_KT0803 6 4
Lacinutrix_sp._5H-3-7-4 3 3
Maribacter_sp._HTCC2170 12 11
Robiginitalea_biformata_HTCC2501 10 7
Croceibacter_atlanticus_HTCC2559 2 2
Aequorivita_sublithincola_DSM_14238 5 4
Zobellia_galactanivorans 50 28
Muricauda_ruestringensis_DSM_13258 4 4
Cellulophaga_algicola_DSM_14237 21 13
Cellulophaga_lytica_DSM_7489 9 5
Flavobacteriaceae_bacterium_3519-10 5 4
Polaribacter_sp._MED152 2 1
Riemerella_anatipestifer_ATCC_11845_=_DSM_15868 2 1
Capnocytophaga_canimorsus_Cc5 1 1
Capnocytophaga_ochracea_DSM_7271 9 5
Flavobacterium_indicum_GPTSA100-9 8 7
Flavobacterium_psychrophilum_JIP02/86 2 2
Flavobacterium_branchiophilum_FL-15 6 5
Flavobacterium_columnare_ATCC_49512 4 3
Flavobacterium_johnsoniae_UW101 16 9
Fibrobacter_succinogenes_subsp._succinogenes_S85 1 1
Parachlamydia_acanthamoebae_UV-7 3 3
Phycisphaera_mikurensis_NBRC_102666 4 4
Isosphaera_pallida_ATCC_43644 16 15
Planctomyces_brasiliensis_DSM_5305 13 13
Planctomyces_limnophilus_DSM_3776 4 4
Rhodopirellula_baltica_SH_1 19 19
Pirellula_staleyi_DSM_6068 16 16
Methylacidiphilum_infernorum_V4 1 1
Coraliomargarita_akajimensis_DSM_45221 8 5
Opitutus_terrae_PB90-1 33 26
Fretibacterium_fastidiosum 1 1
Turneriella_parva_DSM_21527 13 13
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._L550 5 5
Leptospira_interrogans_serovar_Lai_str._IPAV 5 5
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 6 5
Brachyspira_intermedia_PWS/A 1 1
Brachyspira_pilosicoli_95/1000 2 1
Brachyspira_hyodysenteriae_WA1 1 1
Spirochaeta_smaragdinae_DSM_11293 5 2
Spirochaeta_caldaria_DSM_7334 4 2
Treponema_azotonutricium_ZAS-9 1 1
Treponema_primitia_ZAS-2 4 2
Treponema_brennaborense_DSM_12168 4 1
Treponema_denticola_ATCC_35405 2 1
Spirochaeta_africana_DSM_8902 9 5
Spirochaeta_thermophila_DSM_6192 1 1
Thermodesulfatator_indicus_DSM_15286 1 1
Deferribacter_desulfuricans_SSM1 1 1
Petrotoga_mobilis_SJ95 2 2
Mesotoga_prima_MesG1.Ag.4.2 2 2
Fervidobacterium_pennivorans_DSM_9078 1 1
Fervidobacterium_nodosum_Rt17-B1 3 3
Thermosipho_melanesiensis_BI429 3 2
Thermotoga_lettingae_TMO 1 1
Thermotoga_thermarum_DSM_5069 1 1
Sulfurihydrogenibium_sp._YO3AOP1 1 1
Persephonella_marina_EX-H1 1 1
Thermocrinis_albus_DSM_14484 1 1
Dictyoglomus_thermophilum_H-6-12 1 1
Caldisericum_exile_AZM16c01 2 2
Candidatus_Chloracidobacterium_thermophilum_B 22 13
Candidatus_Solibacter_usitatus_Ellin6076 47 39
Granulicella_tundricola_MP5ACTX9 25 13
Granulicella_mallensis_MP5ACTX8 33 24
Candidatus_Koribacter_versatilis_Ellin345 14 10
Terriglobus_saanensis_SP1PR4 24 16
Terriglobus_roseus_DSM_18391 18 12
Acidobacterium_capsulatum_ATCC_51196 19 10
Candidatus_Nitrospira_defluvii 2 2
Leptospirillum_ferrooxidans_C2-3 2 2
Candidatus_Methylomirabilis_oxyfera 1 1
candidate_division_SR1_bacterium_RAAC1_SR1_1 1 1
Acidithiobacillus_caldus_SM-1 1 1
Bdellovibrio_bacteriovorus_HD100 2 2
Nitratifractor_salsuginis_DSM_16511 2 2
Campylobacter_jejuni_subsp._doylei_269.97 2 2
Campylobacter_fetus_subsp._fetus_82-40 1 1
Helicobacter_bizzozeronii_CIII-1 2 2
Desulfomonile_tiedjei_DSM_6799 1 1
Syntrophobacter_fumaroxidans_MPOB 5 4
Desulfurivibrio_alkaliphilus_AHT2 1 1
Desulfatibacillum_alkenivorans_AK-01 15 7
Desulfobacterium_autotrophicum_HRM2 1 1
Desulfococcus_oleovorans_Hxd3 5 3
Desulfomicrobium_baculatum_DSM_4028 1 1
Desulfovibrio_piezophilus 1 1
Desulfovibrio_aespoeensis_Aspo-2 1 1
Desulfovibrio_magneticus_RS-1 1 1
Desulfovibrio_salexigens_DSM_2638 4 2
Desulfovibrio_desulfuricans_subsp._desulfuricans_str._ATCC_27774 1 1
Geobacter_daltonii_FRC-32 5 5
Geobacter_sp._M21 4 4
Geobacter_uraniireducens_Rf4 8 8
Geobacter_lovleyi_SZ 2 1
Geobacter_bemidjiensis_Bem 2 2
Geobacter_sulfurreducens_KN400 4 4
Geobacter_metallireducens_GS-15 2 2
Haliangium_ochraceum_DSM_14365 15 15
Sorangium_cellulosum_'So_ce_56' 27 27
Anaeromyxobacter_sp._Fw109-5 6 6
Anaeromyxobacter_dehalogenans_2CP-1 4 4
Stigmatella_aurantiaca_DW4/3-1 20 17
Corallococcus_coralloides_DSM_2259 10 10
Myxococcus_xanthus_DK_1622 16 12
Myxococcus_fulvus_HW-1 15 13
Dechloromonas_aromatica_RCB 1 1
Thauera_sp._MZ1T 2 2
Azoarcus_sp._KH32C 5 4
Azoarcus_sp._BH72 3 3
Dechlorosoma_suillum_PS 1 1
Pseudogulbenkiania_sp._NH8B 1 1
Chromobacterium_violaceum_ATCC_12472 2 2
Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 4 4
beta_proteobacterium_CB 1 1
Methylibium_petroleiphilum_PM1 2 2
Thiomonas_arsenitoxydans 1 1
Thiomonas_intermedia_K12 1 1
Rubrivivax_gelatinosus_IL144 3 3
Leptothrix_cholodnii_SP-6 6 6
Burkholderia_phytofirmans_PsJN 10 10
Burkholderia_phymatum_STM815 12 12
Burkholderia_xenovorans_LB400 16 15
Ralstonia_eutropha_JMP134 1 1
Cupriavidus_taiwanensis_LMG_19424 2 2
Cupriavidus_necator_N-1 4 4
Ralstonia_eutropha_H16 5 5
Ralstonia_pickettii_12D 6 6
Ralstonia_solanacearum_CFBP2957 3 3
Burkholderia_sp._RPE64 10 10
Burkholderia_sp._CCGE1002 8 8
Burkholderia_thailandensis_E264 5 5
Burkholderia_pseudomallei_1106a 6 6
Burkholderia_mallei_SAVP1 6 6
Burkholderia_ambifaria_AMMD 4 4
Burkholderia_cenocepacia_HI2424 4 4
Burkholderia_multivorans_ATCC_17616 5 5
Burkholderia_vietnamiensis_G4 3 3
Burkholderia_gladioli_BSR3 10 10
Burkholderia_glumae_BGR1 5 5
Verminephrobacter_eiseniae_EF01-2 13 13
Alicycliphilus_denitrificans_K601 1 1
Ramlibacter_tataouinensis_TTB310 5 5
Delftia_sp._Cs1-4 6 6
Delftia_acidovorans_SPH-1 6 6
Polaromonas_sp._JS666 3 3
Polaromonas_naphthalenivorans_CJ2 4 4
Variovorax_paradoxus_S110 12 12
Rhodoferax_ferrireducens_T118 1 1
Acidovorax_ebreus_TPSY 2 2
Acidovorax_sp._KKS102 5 5
Acidovorax_sp._JS42 2 2
Acidovorax_citrulli_AAC00-1 10 10
Acidovorax_avenae_subsp._avenae_ATCC_19860 12 12
Herminiimonas_arsenicoxydans 1 1
Collimonas_fungivorans_Ter331 13 8
Janthinobacterium_sp._Marseille 1 1
Herbaspirillum_seropedicae_SmR1 4 4
Pusillimonas_sp._T7-7 1 1
Advenella_kashmirensis_WT001 4 4
Taylorella_asinigenitalis_MCE3 1 1
Taylorella_equigenitalis_MCE9 1 1
Bordetella_petrii_DSM_12804 7 7
Bordetella_pertussis_Tohama_I 1 1
Bordetella_parapertussis_12822 1 1
Bordetella_bronchiseptica_RB50 3 3
Achromobacter_xylosoxidans_A8 6 6
Achromobacter_xylosoxidans 6 6
Thiobacillus_denitrificans_ATCC_25259 1 1
Nitrosospira_multiformis_ATCC_25196 1 1
Nitrosomonas_sp._Is79A3 2 2
Methylotenera_versatilis_301 1 1
Methylotenera_mobilis_JLW8 1 1
Methylovorus_sp._MP688 1 1
Methylovorus_glucosetrophus_SIP3-4 2 2
Methylobacillus_flagellatus_KT 3 3
Magnetococcus_marinus_MC-1 1 1
Parvularcula_bermudensis_HTCC2503 3 3
Asticcacaulis_excentricus_CB_48 6 6
Brevundimonas_subvibrioides_ATCC_15264 2 2
Caulobacter_sp._K31 8 7
Caulobacter_crescentus_NA1000 4 4
Caulobacter_segnis_ATCC_21756 9 8
Phenylobacterium_zucineum_HLK1 8 8
Erythrobacter_litoralis_HTCC2594 2 2
Sphingopyxis_alaskensis_RB2256 6 6
Novosphingobium_sp._PP1Y 5 5
Novosphingobium_aromaticivorans_DSM_12444 4 4
Sphingobium_sp._SYK-6 6 6
Sphingobium_japonicum_UT26S 3 3
Sphingobium_chlorophenolicum_L-1 5 5
Sphingomonas_sp._MM-1 6 6
Sphingomonas_wittichii_RW1 11 9
Zymomonas_mobilis_subsp._mobilis_NCIMB_11163 4 3
Maricaulis_maris_MCS10 6 6
Hirschia_baltica_ATCC_49814 1 1
Hyphomonas_neptunium_ATCC_15444 5 5
Dinoroseobacter_shibae_DFL_12 2 2
Phaeobacter_gallaeciensis_2.10 3 3
Pseudovibrio_sp._FO-BEG1 9 9
Jannaschia_sp._CCS1 2 2
Ruegeria_sp._TM1040 3 3
Ruegeria_pomeroyi_DSS-3 4 4
Ketogulonicigenium_vulgare_Y25 4 4
Ketogulonigenium_vulgarum_WSH-001 5 5
Roseobacter_litoralis_Och_149 6 6
Roseobacter_denitrificans_OCh_114 4 4
Rhodobacter_sphaeroides_ATCC_17029 2 2
Paracoccus_denitrificans_PD1222 4 4
Rhodospirillum_photometricum_DSM_122 1 1
Tistrella_mobilis_KA081020-065 8 8
Magnetospirillum_magneticum_AMB-1 3 1
Rhodospirillum_centenum_SW 6 4
Rhodospirillum_rubrum_F11 1 1
Azospirillum_lipoferum_4B 4 4
Azospirillum_sp._B510 5 5
Azospirillum_brasilense_Sp245 5 5
Gluconacetobacter_xylinus_NBRC_3288 6 6
Gluconacetobacter_diazotrophicus_PAl_5 5 5
Acidiphilium_multivorum_AIU301 3 3
Acidiphilium_cryptum_JF-5 4 4
Gluconobacter_oxydans_621H 6 6
Acetobacter_pasteurianus_IFO_3283-01 2 2
Polymorphum_gilvum_SL003B-26A1 2 2
alpha_proteobacterium_HIMB5 1 1
alpha_proteobacterium_HIMB59 1 1
Candidatus_Pelagibacter_sp._IMCC9063 2 2
Starkeya_novella_DSM_506 7 7
Xanthobacter_autotrophicus_Py2 1 1
Azorhizobium_caulinodans_ORS_571 3 3
Methylobacterium_chloromethanicum_CM4 7 7
Methylobacterium_extorquens_AM1 10 9
Methylobacterium_sp._4-46 6 6
Methylobacterium_populi_BJ001 7 7
Methylobacterium_nodulans_ORS_2060 3 3
Methylobacterium_radiotolerans_JCM_2831 11 11
Parvibaculum_lavamentivorans_DS-1 4 4
Ochrobactrum_anthropi_ATCC_49188 5 5
Brucella_microti_CCM_4915 2 2
Brucella_pinnipedialis_B2/94 2 2
Brucella_canis_ATCC_23365 2 2
Brucella_suis_ATCC_23445 2 2
Brucella_melitensis_ATCC_23457 2 2
Brucella_ovis_ATCC_25840 1 1
Brucella_abortus_S19 2 2
Sinorhizobium_fredii_NGR234 4 4
Sinorhizobium_medicae_WSM419 6 6
Sinorhizobium_meliloti_AK83 6 6
Genome_sequence_of_Rhizobium_sp._strain_IRBG74 7 7
Rhizobium_etli_CIAT_652 4 4
Rhizobium_leguminosarum_bv._viciae_3841 9 9
Agrobacterium_tumefaciens_str._C58 6 6
Agrobacterium_radiobacter_K84 6 6
Agrobacterium_sp._H13-3 6 6
Agrobacterium_vitis_S4 3 3
Mesorhizobium_sp._BNC1 7 7
Mesorhizobium_opportunistum_WSM2075 14 14
Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 12 12
Mesorhizobium_loti_MAFF303099 12 12
Methylocella_silvestris_BL2 2 2
Beijerinckia_indica_subsp._indica_ATCC_9039 6 6
Pelagibacterium_halotolerans_B2 7 7
Hyphomicrobium_sp._MC1 2 2
Hyphomicrobium_denitrificans_ATCC_51888 2 2
Rhodopseudomonas_palustris_BisA53 2 2
Bradyrhizobium_japonicum_USDA_110 17 17
Bradyrhizobium_sp._ORS_278 11 11
Methylocystis_sp._SC2 3 3
Saccharophagus_degradans_2-40 4 2
Teredinibacter_turnerae_T7901 9 6
Cellvibrio_japonicus_Ueda107 8 6
Haemophilus_somnus_129PT 1 1
Pasteurella_multocida_subsp._multocida_str._3480 1 1
Actinobacillus_succinogenes_130Z 2 2
Actinobacillus_pleuropneumoniae_serovar_5b_str._L20 1 1
Oceanimonas_sp._GK1 4 3
Tolumonas_auensis_DSM_9187 1 1
Aliivibrio_salmonicida_LFI1238 1 1
Vibrio_fischeri_MJ11 3 3
Vibrio_sp._Ex25 1 1
Vibrio_harveyi_ATCC_BAA-1116 1 1
Vibrio_parahaemolyticus_RIMD_2210633 1 1
Vibrio_splendidus_LGP32 2 1
Vibrio_anguillarum_775 1 1
Vibrio_furnissii_NCTC_11218 2 2
Vibrio_vulnificus_MO6-24/O 4 4
Vibrio_cholerae_O395 4 3
Psychromonas_ingrahamii_37 1 1
Idiomarina_loihiensis_L2TR 5 3
Ferrimonas_balearica_DSM_9799 7 5
Shewanella_piezotolerans_WP3 2 2
Shewanella_loihica_PV-4 5 3
Shewanella_halifaxensis_HAW-EB4 5 3
Shewanella_sediminis_HAW-EB3 6 4
Shewanella_denitrificans_OS217 6 3
Shewanella_pealeana_ATCC_700345 3 3
Shewanella_oneidensis_MR-1 5 4
Shewanella_baltica_OS185 5 4
Shewanella_woodyi_ATCC_51908 6 4
Shewanella_sp._MR-4 4 3
Shewanella_amazonensis_SB2B 14 7
Shewanella_violacea_DSS12 4 3
Shewanella_frigidimarina_NCIMB_400 7 5
Shewanella_putrefaciens_CN-32 3 3
Colwellia_psychrerythraea_34H 6 2
Pseudoalteromonas_sp._SM9913 7 4
Pseudoalteromonas_atlantica_T6c 12 10
Pseudoalteromonas_haloplanktis_TAC125 3 2
Glaciecola_sp._4H-3-7+YE-5 13 12
Glaciecola_nitratireducens_FR1064 13 7
Marinobacter_adhaerens_HP15 3 3
Marinobacter_hydrocarbonoclasticus_ATCC_49840 2 2
Marinobacter_aquaeolei_VT8 1 1
Alteromonas_sp._SN2 10 7
Alteromonas_macleodii_str._'Deep_ecotype' 15 8
Kangiella_koreensis_DSM_16069 4 3
Hahella_chejuensis_KCTC_2396 7 7
Alcanivorax_borkumensis_SK2 2 2
Marinomonas_posidonica_IVIA-Po-181 7 5
Marinomonas_sp._MWYL1 7 5
Marinomonas_mediterranea_MMB-1 3 3
Chromohalobacter_salexigens_DSM_3043 4 4
Halomonas_elongata_DSM_2581 4 4
Methylomicrobium_alcaliphilum 2 2
Methylomonas_methanica_MC09 2 2
Methylococcus_capsulatus_str._Bath 1 1
Rhodanobacter_denitrificans 6 3
Frateuria_aurantia_DSM_6220 7 5
Pseudoxanthomonas_spadix_BD-a59 9 6
Pseudoxanthomonas_suwonensis_11-1 10 6
Stenotrophomonas_maltophilia_K279a 9 5
Xylella_fastidiosa_M23 3 2
Xanthomonas_axonopodis_pv._citri_str._306 18 12
Xanthomonas_albilineans_GPE_PC73 13 6
Xanthomonas_oryzae_pv._oryzae_PXO99A 20 11
Xanthomonas_campestris_pv._campestris_str._B100 21 12
Halothiobacillus_neapolitanus_c2 1 1
Alkalilimnicola_ehrlichii_MLHE-1 1 1
Thioalkalivibrio_sulfidophilus_HL-EbGr7 2 2
Nitrosococcus_watsonii_C-113 3 3
Nitrosococcus_halophilus_Nc4 4 3
Nitrosococcus_oceani_ATCC_19707 4 4
Coxiella_burnetii_Dugway_5J108-111 1 1
Legionella_longbeachae_NSW150 3 3
gamma_proteobacterium_HdN1 3 3
Photorhabdus_asymbiotica 1 1
Photorhabdus_luminescens_subsp._laumondii_TTO1 1 1
Xenorhabdus_nematophila_ATCC_19061 1 1
Providencia_stuartii_MRSN_2154 3 3
Edwardsiella_ictaluri_93-146 1 1
Rahnella_sp._Y9602 1 1
Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 2 2
Yersinia_pseudotuberculosis_IP_31758 1 1
Yersinia_pestis_Pestoides_F 1 1
Yersinia_enterocolitica_subsp._enterocolitica_8081 1 1
Serratia_sp._AS12 4 4
Serratia_sp._ATCC_39006 2 2
Serratia_plymuthica_AS9 4 4
Serratia_proteamaculans_568 3 3
Dickeya_dadantii_Ech703 2 1
Dickeya_zeae_Ech1591 1 1
Pectobacterium_wasabiae_WPP163 2 2
Pectobacterium_sp._SCC3193 2 2
Pectobacterium_carotovorum_subsp._carotovorum_PC1 3 3
Pantoea_sp._At-9b 7 7
Pantoea_vagans_C9-1 3 3
Pantoea_ananatis_LMG_20103 3 3
Erwinia_tasmaniensis_Et1/99 2 2
Erwinia_sp._Ejp617 2 2
Erwinia_billingiae_Eb661 2 2
Erwinia_pyrifoliae_Ep1/96 2 2
Erwinia_amylovora_ATCC_49946 1 1
Escherichia_blattae_DSM_4481 1 1
Cronobacter_turicensis_z3032 4 4
Cronobacter_sakazakii_ES15 2 2
Enterobacteriaceae_bacterium_strain_FGI_57 2 2
Salmonella_bongori_NCTC_12419 1 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_C_strain_RKS4594 1 1
Klebsiella_oxytoca_E718 2 2
Klebsiella_variicola_At-22 3 3
Klebsiella_pneumoniae_NTUH-K2044 4 4
Enterobacter_aerogenes_KCTC_2190 1 1
Enterobacter_sp._R4-368 2 2
Enterobacter_sp._638 2 2
Enterobacter_asburiae_LF7a 1 1
Enterobacter_cloacae_subsp._dissolvens_SDM 4 4
Citrobacter_rodentium_ICC168 1 1
Azotobacter_vinelandii_DJ 4 4
Pseudomonas_sp._TKP 8 8
Pseudomonas_sp._UW4 6 6
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 9 9
Pseudomonas_entomophila_L48 3 3
Pseudomonas_syringae_pv._tomato_str._DC3000 6 6
Pseudomonas_stutzeri_A1501 2 2
Pseudomonas_fulva_12-X 6 5
Pseudomonas_putida_F1 4 4
Pseudomonas_protegens_Pf-5 3 3
Pseudomonas_fluorescens_SBW25 7 7
Pseudomonas_mendocina_ymp 5 4
Pseudomonas_aeruginosa_UCBPP-PA14 3 3
Pseudomonas_sp._VLB120 3 3
Psychrobacter_sp._G 1 1
Psychrobacter_arcticus_273-4 2 2
Psychrobacter_cryohalolentis_K5 1 1
Acinetobacter_calcoaceticus_PHEA-2 1 1
Acinetobacter_baumannii_ATCC_17978 2 2
Acinetobacter_sp._ADP1 2 2
Methylophaga_sp._JAM1 1 1
Cenarchaeum_symbiosum_A 24 15
Candidatus_Nitrosopumilus_sp._AR2 2 2
Nitrosopumilus_maritimus_SCM1 3 3
Ignisphaera_aggregans_DSM_17230 2 2
Staphylothermus_hellenicus_DSM_12710 1 1
Desulfurococcus_fermentans_DSM_16532 2 1
Desulfurococcus_kamchatkensis_1221n 2 1
Metallosphaera_cuprina_Ar-4 1 1
Metallosphaera_sedula_DSM_5348 1 1
Acidianus_hospitalis_W1 2 2
Sulfolobus_tokodaii_str._7 2 2
Sulfolobus_islandicus_Y.N.15.51 1 1
Sulfolobus_solfataricus_P2 2 2
Sulfolobus_acidocaldarius_DSM_639 1 1
Caldivirga_maquilingensis_IC-167 2 2
Pyrobaculum_sp._1860 2 2
Thermoproteus_uzoniensis_768-20 2 2
halophilic_archaeon_DL31 1 1
Methanocella_arvoryzae_MRE50 5 5
Methanocella_conradii_HZ254 1 1
Methanocella_paludicola_SANAE 2 2
Methanosaeta_thermophila_PT 2 2
Methanosarcina_acetivorans_C2A 5 5
Methanosarcina_barkeri_str._Fusaro 1 1
Methanohalophilus_mahii_DSM_5219 2 1
Methanosphaerula_palustris_E1-9c 12 11
Methanoregula_boonei_6A8 1 1
Methanospirillum_hungatei_JF-1 2 2
Methanoplanus_petrolearius_DSM_11571 2 2
Methanoculleus_bourgensis_MS2 6 4
Methanoculleus_marisnigri_JR1 1 1
Methanopyrus_kandleri_AV19 1 1
Thermococcus_sp._4557 1 1
Thermococcus_gammatolerans_EJ3 2 2
Thermococcus_barophilus_MP 2 2
Pyrococcus_yayanosii_CH1 1 1
Thermoplasma_volcanium_GSS1 1 1
Thermoplasma_acidophilum_DSM_1728 1 1
Picrophilus_torridus_DSM_9790 1 1
Salinarchaeum_sp._Harcht-Bsk1 1 1
Halopiger_xanaduensis_SH-6 1 1
Haloterrigena_turkmenica_DSM_5511 2 2
Natrialba_magadii_ATCC_43099 1 1
Haloquadratum_walsbyi_DSM_16790 1 1
Haloferax_mediterranei_ATCC_33500 1 1
Haloferax_volcanii_DS2 2 2
Halomicrobium_mukohataei_DSM_12286 1 1
Natronomonas_pharaonis_DSM_2160 1 1
Haloarcula_marismortui_ATCC_43049 1 1
Methanothermus_fervidus_DSM_2088 1 1
Methanothermobacter_marburgensis_str._Marburg 1 1
Aciduliprofundum_sp._MAR08-339 1 1

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   16 16
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   15 15
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   13 13
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   8 8
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   40 13
Cryptococcus_neoformans_var._grubii_H99_ 5 5
Cryptococcus_neoformans_B-3501A_ 6 6
Cryptococcus_neoformans_JEC21_ 5 5
Paracoccidioides_brasiliensis_Pb01_ 2 2
Paracoccidioides_brasiliensis_Pb03_ 2 2
Coccidioides_posadasii_str._Silveira_ 2 2
Coccidioides_immitis_RMSCC_3703_ 1 1
Coccidioides_immitis_RMSCC_2394_ 2 2
Coccidioides_immitis_H538.4_ 2 2
Ajellomyces_dermatitidis_ER-3_ 4 4
Histoplasma_capsulatum_H143 4 4
Histoplasma_capsulatum_H88 4 4
Histoplasma_capsulatum_G186AR 5 5
Aspergillus_fumigatus_A1163_ 9 9
Candida_albicans_WO-1_ 1 1
Saccharomyces_cerevisiae_UC5 1 1
Saccharomyces_cerevisiae_PW5 2 2
Saccharomyces_cerevisiae_FL100 1 1
Saccharomyces_cerevisiae_CLIB324 2 2
Saccharomyces_cerevisiae_CBS7960 2 2
Saccharomyces_cerevisiae_YJM269 2 2
Saccharomyces_cerevisiae_T7 2 2
Saccharomyces_cerevisiae_FostersB 2 2
Saccharomyces_cerevisiae_FostersO 1 1
Saccharomyces_cerevisiae_VL3 1 1
Saccharomyces_cerevisiae_Vin13 1 1
Saccharomyces_cerevisiae_LalvinQA23 2 2
Saccharomyces_cerevisiae_AWRI796 1 1
Saccharomyces_cerevisiae_Sigma1278b 2 2
Saccharomyces_cerevisiae_W303 2 2
Saccharomyces_cerevisiae_JAY291 2 2
Saccharomyces_cerevisiae_AWRI1631 2 2
Saccharomyces_cerevisiae_YPS163 1 1
Saccharomyces_cerevisiae_M22 1 1
Saccharomyces_cerevisiae_T73 1 1
Saccharomyces_cerevisiae_CLIB215 1 1
Saccharomyces_cerevisiae_Y10 1 1
Saccharomyces_cerevisiae_YJM789_ 2 2
Saccharomyces_cerevisiae_YJM789 2 2
Saccharomyces_cerevisiae_RM11-1a 2 2
Saccharomyces_cerevisiae_RM11-1a_ 2 2
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   2 2
Batrachochytrium_dendrobatidis_JEL423_ 1 1
Batrachochytrium_dendrobatidis_JAM81_ 2 2
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   16 16
Hordeum_vulgare_22   (Domesticated barley)   12 12
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   33 33
Trypanosoma_brucei_Lister_427_v4.1 2 2
Neospora_caninum_Nc-Liverpool_6.2 1 1
Plasmodium_falciparum_HB3_ 1 1
Plasmodium_falciparum_Dd2_ 1 1
Chroococcidiopsis_thermalis_PCC_7203 7 7
Chamaesiphon_minutus_PCC_6605 2 2
Synechocystis_sp._PCC_6803_substr._PCC-P 2 2
Synechocystis_sp._PCC_6803_substr._PCC-N 2 2
Synechocystis_sp._PCC_6803_substr._GT-I 2 2
Synechocystis_sp._PCC_6803 2 2
Synechococcus_sp._JA-2-3B'a(2-13) 3 2
Synechococcus_sp._JA-3-3Ab 1 1
Synechococcus_sp._CC9902 1 1
Synechococcus_sp._RCC307 2 2
Synechococcus_sp._WH_7803 1 1
Synechococcus_sp._PCC_7002 2 2
Prochlorococcus_marinus_str._NATL1A 1 1
Prochlorococcus_marinus_subsp._pastoris_str._CCMP1986 1 1
Prochlorococcus_marinus_str._MIT_9312 1 1
Prochlorococcus_marinus_str._NATL2A 1 1
Crinalium_epipsammum_PCC_9333 1 1
Oscillatoria_nigro-viridis_PCC_7112 5 5
Oscillatoria_acuminata_PCC_6304 2 2
Arthrospira_platensis_NIES-39 1 1
Cyanothece_sp._PCC_7822 5 5
Cyanothece_sp._PCC_7425 9 8
Cyanothece_sp._PCC_7424 6 5
Cyanothece_sp._ATCC_51142 2 2
Cyanothece_sp._PCC_8801 5 5
Cyanobacterium_aponinum_PCC_10605 1 1
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 14 12
Pleurocapsa_minor_Pleurocapsa_sp._PCC_7327 1 1
Stanieria_cyanosphaera_PCC_7437 2 2
Calothrix_parietina_Calothrix_sp._PCC_6303 3 3
Cylindrospermum_stagnale_PCC_7417 4 3
Anabaena_cylindrica_PCC_7122 7 6
Spiroplasma_syrphidicola_EA-1 2 2
Spiroplasma_chrysopicola_DF-1 5 5
Frankia_sp._EuI1c 13 11
Frankia_sp._CcI3 1 1
Nocardiopsis_alba_ATCC_BAA-2165 4 4
Streptomyces_albus_J1074 4 4
Streptomyces_rapamycinicus_NRRL_5491 15 15
Streptomyces_davawensis_JCM_4913 9 9
Streptomyces_fulvissimus_DSM_40593 5 5
Streptomyces_venezuelae_ATCC_10712 9 9
Streptomyces_collinus_Tu_365 4 4
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 2 2
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 8 8
Saccharothrix_espanaensis_DSM_44229 13 12
Amycolatopsis_mediterranei_RB 11 10
Amycolatopsis_mediterranei_S699 11 10
Amycolatopsis_mediterranei_S699 11 10
Amycolatopsis_orientalis_HCCB10007 6 6
Propionibacterium_acnes_TypeIA2_P.acn31 2 2
Propionibacterium_acnes_TypeIA2_P.acn17 2 2
Propionibacterium_acnes_TypeIA2_P.acn33 1 1
Propionibacterium_acnes_C1 2 2
Propionibacterium_acnes_HL096PA1 1 1
Propionibacterium_acnes_266 2 2
Propionibacterium_acidipropionici_ATCC_4875 2 2
Actinoplanes_friuliensis_DSM_7358 12 12
Rhodococcus_pyridinivorans_SB3094 9 9
Rhodococcus_erythropolis_CCM2595 6 6
Nocardia_brasiliensis_ATCC_700358 10 10
Mycobacterium_sp._MOTT36Y 6 4
Mycobacterium_sp._JDM601 5 5
Mycobacterium_abscessus_subsp._bolletii_50594 2 2
Mycobacterium_liflandii_128FXT 6 5
Mycobacterium_sp._KMS 5 5
Mycobacterium_sp._MCS 5 5
Mycobacterium_yongonense_05-1390 3 3
Mycobacterium_intracellulare_MOTT-64 3 3
Mycobacterium_indicus_pranii_MTCC_9506 5 3
Mycobacterium_intracellulare_MOTT-02 3 3
Mycobacterium_avium_subsp._paratuberculosis_MAP4 3 3
Mycobacterium_avium_subsp._paratuberculosis_K-10 3 3
Mycobacterium_canettii_CIPT_140070017 1 1
Mycobacterium_canettii_CIPT_140060008 1 1
Mycobacterium_canettii_CIPT_140070008 1 1
Mycobacterium_canettii_CIPT_140070010 1 1
Mycobacterium_tuberculosis_EAI5/NITR206 1 1
Mycobacterium_tuberculosis_EAI5 1 1
Mycobacterium_tuberculosis_CAS/NITR204 1 1
Mycobacterium_tuberculosis_str._Beijing/NITR203 1 1
Mycobacterium_tuberculosis_UT205 1 1
Mycobacterium_tuberculosis_RGTB423 1 1
Mycobacterium_tuberculosis_RGTB327 1 1
Mycobacterium_tuberculosis_CTRI-2 1 1
Mycobacterium_tuberculosis_str._Erdman_=_ATCC_35801 1 1
Mycobacterium_tuberculosis_KZN_605 1 1
Mycobacterium_tuberculosis_KZN_4207 1 1
Mycobacterium_tuberculosis_CCDC5180 1 1
Mycobacterium_tuberculosis_CCDC5079 1 1
Mycobacterium_tuberculosis_CCDC5079 1 1
Mycobacterium_tuberculosis_H37Ra 1 1
Mycobacterium_tuberculosis_str._Haarlem 1 1
Mycobacterium_tuberculosis_F11 1 1
Mycobacterium_tuberculosis_H37Rv 1 1
Mycobacterium_tuberculosis_CDC1551 1 1
Mycobacterium_bovis_AF2122/97 1 1
Mycobacterium_bovis_BCG_str._Korea_1168P 1 1
Mycobacterium_bovis_BCG_str._Mexico 1 1
Mycobacterium_bovis_BCG_str._Tokyo_172 1 1
Mycobacterium_gilvum_Spyr1 5 4
Mycobacterium_smegmatis_str._MC2_155 10 8
Mycobacterium_kansasii_ATCC_12478 3 3
Corynebacterium_maris_DSM_45190 4 4
Corynebacterium_halotolerans_YIM_70093_=_DSM_44683 1 1
Corynebacterium_terpenotabidum_Y-11 2 2
Corynebacterium_ulcerans_BR-AD22 1 1
Corynebacterium_ulcerans_809 1 1
Corynebacterium_urealyticum_DSM_7111 4 4
Corynebacterium_argentoratense_DSM_44202 1 1
Corynebacterium_callunae_DSM_20147 1 1
Corynebacterium_pseudotuberculosis_258 2 2
Corynebacterium_pseudotuberculosis_Cp162 2 2
Corynebacterium_pseudotuberculosis_P54B96 2 2
Corynebacterium_pseudotuberculosis_267 2 2
Corynebacterium_pseudotuberculosis_1/06-A 1 1
Corynebacterium_pseudotuberculosis_42/02-A 1 1
Corynebacterium_pseudotuberculosis_3/99-5 1 1
Corynebacterium_pseudotuberculosis_31 2 2
Corynebacterium_pseudotuberculosis_CIP_52.97 2 2
Corynebacterium_pseudotuberculosis_PAT10 2 2
Corynebacterium_pseudotuberculosis_I19 2 2
Corynebacterium_pseudotuberculosis_FRC41 1 1
Corynebacterium_pseudotuberculosis_C231 2 2
Corynebacterium_pseudotuberculosis_1002 1 1
Corynebacterium_glutamicum_SCgG2 1 1
Corynebacterium_glutamicum_SCgG1 1 1
Corynebacterium_diphtheriae_BH8 2 2
Corynebacterium_diphtheriae_INCA_402 1 1
Corynebacterium_diphtheriae_VA01 1 1
Corynebacterium_diphtheriae_HC04 1 1
Corynebacterium_diphtheriae_HC03 1 1
Corynebacterium_diphtheriae_HC02 1 1
Corynebacterium_diphtheriae_HC01 1 1
Corynebacterium_diphtheriae_241 1 1
Corynebacterium_diphtheriae_CDCE_8392 1 1
Corynebacterium_diphtheriae_PW8 1 1
Corynebacterium_diphtheriae_C7_(beta) 1 1
Corynebacterium_diphtheriae_31A 2 2
Clavibacter_michiganensis_subsp._sepedonicus 3 3
Clavibacter_michiganensis_subsp._nebraskensis_NCPPB_2581 3 3
Bifidobacterium_longum_NCC2705 1 1
Bifidobacterium_longum_DJO10A 1 1
Bifidobacterium_longum_subsp._infantis_157F 1 1
Bifidobacterium_longum_subsp._longum_KACC_91563 1 1
Bifidobacterium_longum_subsp._longum_BBMN68 1 1
Bifidobacterium_longum_subsp._longum_F8 1 1
Bifidobacterium_longum_subsp._longum_JCM_1217 1 1
Actinomyces_viscosus_C505 1 1
Dehalococcoides_sp._VS 8 3
Chthonomonas_calidirosea_T49 11 10
Deinococcus_peraridilitoris_DSM_19664 1 1
Clostridium_thermocellum_DSM_1313 3 3
[Clostridium]_stercorarium_Clostridiu_subsp._stercorarium_DSM_8532 1 1
Faecalibacterium_prausnitzii_L2-6 1 1
Sulfobacillus_acidophilus_TPY 1 1
Clostridium_acidurici_9a 4 1
Desulfosporosinus_meridiei_DSM_13257 2 1
Desulfitobacterium_hafniense_DCB-2 1 1
Desulfotomaculum_gibsoniae_DSM_7213 2 2
Clostridium_perfringens_SM101 3 1
Clostridium_perfringens_str._13 3 1
Clostridium_pasteurianum_BC1 1 1
Clostridium_botulinum_H04402_065 1 1
Clostridium_botulinum_BKT015925 2 2
Clostridium_botulinum_E3_str._Alaska_E43 3 1
Lactobacillus_plantarum_WCFS1 1 1
Lactobacillus_brevis_KB290 1 1
Lactococcus_garvieae_Lg2 1 1
Streptococcus_equi_subsp._zooepidemicus_ATCC_35246 1 1
Streptococcus_equi_subsp._zooepidemicus 1 1
Exiguobacterium_antarcticum_B7 1 1
Thermobacillus_composti_KWC4 4 4
Paenibacillus_sp._Y412MC10 3 3
Paenibacillus_mucilaginosus_KNP414 7 7
Paenibacillus_mucilaginosus_K02 7 7
Paenibacillus_larvae_subsp._larvae_DSM_25430 1 1
Paenibacillus_polymyxa_CR1 2 2
Paenibacillus_polymyxa_SC2 2 2
Paenibacillus_polymyxa_E681 3 3
Bacillus_amyloliquefaciens_subsp._plantarum_sequencing 2 2
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5033 2 2
Bacillus_amyloliquefaciens_subsp._plantarum_AS43.3 2 2
Bacillus_amyloliquefaciens_subsp._plantarum_YAU_B9601-Y2 2 2
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5113 2 2
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5036 2 2
Bacillus_amyloliquefaciens_subsp._plantarum_CAU_B946 2 2
Bacillus_amyloliquefaciens_LFB112 2 2
Bacillus_amyloliquefaciens_CC178 2 2
Bacillus_amyloliquefaciens_Y2 2 2
Bacillus_amyloliquefaciens_IT-45 2 2
Bacillus_amyloliquefaciens_XH7 3 3
Bacillus_amyloliquefaciens_LL3 3 3
Bacillus_amyloliquefaciens_TA208 3 3
Bacillus_amyloliquefaciens_DSM_7 3 3
Bacillus_subtilis_PY79 1 1
Bacillus_subtilis_XF-1 1 1
Bacillus_subtilis_QB928 1 1
Bacillus_subtilis_BSn5 2 2
Bacillus_subtilis_subsp._subtilis_str._BAB-1 1 1
Bacillus_subtilis_subsp._subtilis_str._BSP1 1 1
Bacillus_subtilis_subsp._subtilis_str._RO-NN-1 1 1
Bacillus_subtilis_subsp._subtilis_6051-HGW 1 1
Bacillus_subtilis_subsp._spizizenii_TU-B-10 1 1
Bacillus_subtilis_subsp._spizizenii_str._W23 1 1
Bacillus_subtilis_subsp._natto_BEST195 3 3
Bacillus_infantis_NRRL_B-14911 3 3
Bacillus_thuringiensis_HD-771 1 1
Bacillus_thuringiensis_HD-789 1 1
Bacillus_thuringiensis_MC28 1 1
Bacillus_thuringiensis_serovar_chinensis_CT-43 2 2
Bacillus_thuringiensis_YBT-1518 2 2
Bacillus_thuringiensis_Bt407 2 2
Bacillus_thuringiensis_serovar_konkukian_str._97-27 1 1
Bacillus_thuringiensis_serovar_kurstaki_str._HD73 2 2
Bacillus_thuringiensis_BMB171 2 2
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 3 3
Bacillus_cereus_FRI-35 1 1
Bacillus_cereus_biovar_anthracis_str._CI 1 1
Bacillus_cereus_AH187 1 1
Bacillus_cereus_B4264 1 1
Bacillus_cereus_G9842 1 1
Bacillus_cereus_Q1 1 1
Bacillus_cereus_F837/76 2 2
Bacillus_cereus_NC7401 1 1
Bacillus_cereus_E33L 1 1
Bacillus_cereus_ATCC_14579 1 1
Bacillus_cereus_ATCC_10987 1 1
Bacillus_megaterium_WSH-002 1 1
Bacillus_megaterium_QM_B1551 2 2
Staphylococcus_aureus_subsp._aureus_MSHR1132 1 1
Staphylococcus_pasteuri_SP1 1 1
Staphylococcus_lugdunensis_N920143 1 1
Staphylococcus_warneri_SG1 1 1
Staphylococcus_epidermidis_ATCC_12228 1 1
Staphylococcus_aureus_CA-347 1 1
Staphylococcus_aureus_Bmb9393 1 1
Staphylococcus_aureus_M1 1 1
Staphylococcus_aureus_08BA02176 1 1
Staphylococcus_aureus_ST228/18412 1 1
Staphylococcus_aureus_ST228/18341 1 1
Staphylococcus_aureus_ST228/16125 1 1
Staphylococcus_aureus_ST228/16035 1 1
Staphylococcus_aureus_ST228/15532 1 1
Staphylococcus_aureus_ST228/10497 1 1
Staphylococcus_aureus_ST228/10388 1 1
Staphylococcus_aureus_04-02981 1 1
Staphylococcus_aureus_RF122 1 1
Staphylococcus_aureus_subsp._aureus_Z172 1 1
Staphylococcus_aureus_subsp._aureus_6850 1 1
Staphylococcus_aureus_subsp._aureus_SA957 1 1
Staphylococcus_aureus_subsp._aureus_CN1 1 1
Staphylococcus_aureus_subsp._aureus_SA40 1 1
Staphylococcus_aureus_subsp._aureus_11819-97 1 1
Staphylococcus_aureus_subsp._aureus_M013 1 1
Staphylococcus_aureus_subsp._aureus_HO_5096_0412 1 1
Staphylococcus_aureus_subsp._aureus_VC40 1 1
Staphylococcus_aureus_subsp._aureus_T0131 1 1
Staphylococcus_aureus_subsp._aureus_LGA251 1 1
Staphylococcus_aureus_subsp._aureus_ECT-R_2 1 1
Staphylococcus_aureus_subsp._aureus_JKD6159 1 1
Staphylococcus_aureus_subsp._aureus_ED133 1 1
Staphylococcus_aureus_subsp._aureus_ED98 1 1
Staphylococcus_aureus_subsp._aureus_TW20 1 1
Staphylococcus_aureus_subsp._aureus_55/2053 1 1
Staphylococcus_aureus_subsp._aureus_TCH60 1 1
Staphylococcus_aureus_subsp._aureus_str._JKD6008 1 1
Staphylococcus_aureus_subsp._aureus_71193 1 1
Staphylococcus_aureus_subsp._aureus_S0385 1 1
Staphylococcus_aureus_subsp._aureus_str._Newman 1 1
Staphylococcus_aureus_subsp._aureus_Mu3 1 1
Staphylococcus_aureus_subsp._aureus_USA300_TCH1516 1 1
Staphylococcus_aureus_subsp._aureus_USA300_FPR3757 1 1
Staphylococcus_aureus_subsp._aureus_JH9 1 1
Staphylococcus_aureus_subsp._aureus_MSSA476 1 1
Staphylococcus_aureus_subsp._aureus_MRSA252 1 1
Staphylococcus_aureus_subsp._aureus_MW2 1 1
Staphylococcus_aureus_subsp._aureus_N315 1 1
Staphylococcus_aureus_subsp._aureus_Mu50 1 1
Staphylococcus_aureus_subsp._aureus_COL 1 1
Staphylococcus_aureus_subsp._aureus_NCTC_8325 1 1
Salinibacter_ruber_DSM_13855 4 2
Rhodothermus_marinus_SG0.5JP17-172 12 10
Echinicola_vietnamensis_DSM_17526 26 14
Emticicia_oligotrophica_DSM_17448 18 14
Prevotella_sp._oral_taxon_299_str._F0039 2 1
Prevotella_dentalis_DSM_3688 15 10
Alistipes_shahii_WAL_8301 14 7
Bacteroides_xylanisolvens_XB1A 50 25
Bacteroides_fragilis_638R 21 17
Bacteroides_fragilis_NCTC_9343 23 15
Nonlabens_dokdonensis_DSW-6 2 2
Psychroflexus_torquis_ATCC_700755 4 4
Riemerella_anatipestifer_RA-CH-2 2 1
Riemerella_anatipestifer_RA-CH-1 3 2
Riemerella_anatipestifer_RA-GD 2 1
Riemerella_anatipestifer_ATCC_11845_=_DSM_15868 2 1
Fibrobacter_succinogenes_subsp._succinogenes_S85 1 1
Chlamydophila_pneumoniae_LPCoLN 1 1
Singulisphaera_acidiphila_DSM_18658 16 16
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._JB197 4 4
Leptospira_interrogans_serovar_Lai_str._56601 5 5
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 5 5
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Ames)' 5 4
Brachyspira_pilosicoli_P43/6/78 1 1
Treponema_pedis_str._T_A4 1 1
Spirochaeta_thermophila_DSM_6578 1 1
Leptospirillum_ferriphilum_ML-04 4 4
Bdellovibrio_exovorus_JSS 1 1
Bdellovibrio_bacteriovorus_str._Tiberius 3 2
Campylobacter_jejuni_Waterborne_C.jejuni_Outbreak 2 2
Campylobacter_jejuni_RM1221 2 2
Campylobacter_jejuni_subsp._jejuni_00-2544 2 2
Campylobacter_jejuni_subsp._jejuni_00-2538 2 2
Campylobacter_jejuni_subsp._jejuni_00-2426 2 2
Campylobacter_jejuni_subsp._jejuni_00-2425 2 2
Campylobacter_jejuni_subsp._jejuni_PT14 2 2
Campylobacter_jejuni_subsp._jejuni_ICDCCJ07001 2 2
Campylobacter_jejuni_subsp._jejuni_S3 2 2
Campylobacter_jejuni_subsp._jejuni_M1 2 2
Campylobacter_jejuni_subsp._jejuni_IA3902 2 2
Campylobacter_jejuni_subsp._jejuni_81116 2 2
Campylobacter_jejuni_subsp._jejuni_81-176 2 2
Campylobacter_jejuni_subsp._jejuni_NCTC_11168-BN148 2 2
Campylobacter_jejuni_subsp._jejuni_NCTC_11168_=_ATCC_700819 2 2
Campylobacter_coli_76339 1 1
Campylobacter_coli_15-537360 2 2
Campylobacter_coli_CVM_N29710 2 2
Desulfocapsa_sulfexigens_DSM_10523 2 2
Desulfovibrio_hydrothermalis_AM13_=_DSM_14728 8 4
Desulfovibrio_gigas_DSM_1382_=_ATCC_19364 5 4
Geobacter_sp._M18 1 1
Geobacter_sulfurreducens_PCA 4 4
Sorangium_cellulosum_So0157-2 34 33
Anaeromyxobacter_sp._K 6 5
Anaeromyxobacter_dehalogenans_2CP-C 5 4
Myxococcus_stipitatus_DSM_14675 21 18
Burkholderia_phenoliruptrix_BR3459a 9 9
Pandoraea_pnomenusa_3kgm 1 1
Ralstonia_pickettii_12J 5 5
Ralstonia_solanacearum_FQY_4 4 4
Ralstonia_solanacearum_Po82 2 2
Ralstonia_solanacearum_PSI07 4 4
Ralstonia_solanacearum_CMR15 3 3
Ralstonia_solanacearum_GMI1000 4 4
Burkholderia_sp._YI23 13 13
Burkholderia_sp._CCGE1003 9 9
Burkholderia_sp._CCGE1001 10 10
Burkholderia_sp._KJ006 3 3
Burkholderia_thailandensis_MSMB121 8 8
Burkholderia_pseudomallei_MSHR305 7 7
Burkholderia_pseudomallei_NCTC_13179 8 8
Burkholderia_pseudomallei_BPC006 6 6
Burkholderia_pseudomallei_1026b 8 8
Burkholderia_pseudomallei_668 6 6
Burkholderia_pseudomallei_1710b 6 6
Burkholderia_pseudomallei_K96243 9 9
Burkholderia_mallei_NCTC_10229 8 8
Burkholderia_mallei_NCTC_10247 8 8
Burkholderia_mallei_ATCC_23344 7 7
Burkholderia_lata 10 9
Burkholderia_ambifaria_MC40-6 4 4
Burkholderia_cenocepacia_MC0-3 5 5
Burkholderia_cenocepacia_AU_1054 4 4
Burkholderia_cenocepacia_J2315 6 6
Burkholderia_multivorans_ATCC_17616 5 5
Burkholderia_cepacia_GG4 7 7
Candidatus_Symbiobacter_mobilis_Comamonadaceae_bacterium_CR 1 1
Alicycliphilus_denitrificans_BC 2 2
Variovorax_paradoxus_B4 11 11
Variovorax_paradoxus_EPS 14 13
Bordetella_pertussis_CS 1 1
Bordetella_parapertussis_18323 1 1
Bordetella_parapertussis_Bpp5 3 3
Bordetella_bronchiseptica_MO149 3 3
Bordetella_bronchiseptica_253 3 3
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 5 5
Nitrosomonas_sp._AL212 2 2
Sulfuricella_denitrificans_skB26 1 1
Caulobacter_crescentus_CB15 4 4
Zymomonas_mobilis_subsp._mobilis_ATCC_29191 5 3
Zymomonas_mobilis_subsp._mobilis_CP4 5 4
Zymomonas_mobilis_subsp._mobilis_ATCC_10988 1 1
Zymomonas_mobilis_subsp._mobilis_ZM4 5 4
Zymomonas_mobilis_subsp._pomaceae_ATCC_29192 7 4
Phaeobacter_gallaeciensis_DSM_17395 1 1
Phaeobacter_gallaeciensis_DSM_26640 1 1
Leisingera_methylohalidivorans_DSM_14336 1 1
Octadecabacter_antarcticus_307 3 3
Octadecabacter_arcticus_238 1 1
Rhodobacter_sphaeroides_KD131 2 2
Rhodobacter_sphaeroides_ATCC_17025 3 3
Rhodobacter_sphaeroides_2.4.1 2 2
Paracoccus_aminophilus_JCM_7686 4 4
Magnetospirillum_gryphiswaldense_MSR-1_v2 5 4
Rhodospirillum_rubrum_ATCC_11170 1 1
Gluconacetobacter_diazotrophicus_PAl_5 5 5
Gluconobacter_oxydans_H24 9 9
Acetobacter_pasteurianus_386B 2 2
Acetobacter_pasteurianus_IFO_3283-12 2 2
Acetobacter_pasteurianus_IFO_3283-01-42C 2 2
Acetobacter_pasteurianus_IFO_3283-32 2 2
Acetobacter_pasteurianus_IFO_3283-26 2 2
Acetobacter_pasteurianus_IFO_3283-22 2 2
Acetobacter_pasteurianus_IFO_3283-07 2 2
Acetobacter_pasteurianus_IFO_3283-03 2 2
Candidatus_Pelagibacter_ubique_HTCC1062 1 1
Ehrlichia_ruminantium_str._Welgevonden 1 1
Ehrlichia_ruminantium_str._Welgevonden 1 1
Methylobacterium_extorquens_DM4 6 6
Methylobacterium_extorquens_PA1 6 6
Brucella_ceti_TE10759-12 1 1
Brucella_ceti_TE28753-12 1 1
Brucella_canis_HSK_A52141 2 2
Brucella_suis_VBI22 2 2
Brucella_suis_1330 2 2
Brucella_suis_1330 2 2
Brucella_melitensis_NI 2 2
Brucella_melitensis_M5-90 2 2
Brucella_melitensis_M28 2 2
Brucella_melitensis_bv._1_str._16M 2 2
Brucella_abortus_A13334 2 2
Brucella_melitensis_biovar_Abortus_2308 2 2
Brucella_abortus_bv._1_str._9-941 2 2
Sinorhizobium_fredii_USDA_257 4 4
Sinorhizobium_fredii_HH103 4 4
Sinorhizobium_meliloti_2011 5 5
Sinorhizobium_meliloti_GR4 8 8
Sinorhizobium_meliloti_Rm41 8 8
Sinorhizobium_meliloti_SM11 8 8
Sinorhizobium_meliloti_BL225C 8 8
Sinorhizobium_meliloti_1021 8 8
Rhizobium_etli_CFN_42 5 5
Rhizobium_etli_bv._mimosae_str._Mim1 7 7
Rhizobium_tropici_CIAT_899 4 4
Rhizobium_leguminosarum_bv._trifolii_WSM2304 6 6
Rhizobium_leguminosarum_bv._trifolii_WSM1325 7 7
Mesorhizobium_australicum_WSM2073 9 9
Hyphomicrobium_nitrativorans_NL23 2 2
Hyphomicrobium_denitrificans_1NES1 1 1
Rhodopseudomonas_palustris_DX-1 4 3
Rhodopseudomonas_palustris_TIE-1 3 2
Rhodopseudomonas_palustris_HaA2 3 3
Rhodopseudomonas_palustris_BisB5 2 2
Rhodopseudomonas_palustris_BisB18 3 3
Rhodopseudomonas_palustris_CGA009 3 2
Bradyrhizobium_sp._S23321 12 12
Bradyrhizobium_sp._BTAi1 10 10
Bradyrhizobium_oligotrophicum_S58 13 13
Bradyrhizobium_japonicum_USDA_6 16 16
Simiduia_agarivorans_SA1_=_DSM_21679 6 5
Mannheimia_succiniciproducens_MBEL55E 1 1
Haemophilus_somnus_2336 1 1
Mannheimia_haemolytica_USMARC_2286 1 1
Mannheimia_haemolytica_M42548 1 1
Mannheimia_haemolytica_D174 1 1
Mannheimia_haemolytica_D171 1 1
Mannheimia_haemolytica_D153 1 1
Mannheimia_haemolytica_USDA-ARS-USMARC-183 1 1
Mannheimia_haemolytica_USDA-ARS-USMARC-185 1 1
Pasteurella_multocida_36950 1 1
Pasteurella_multocida_subsp._multocida_str._HN06 1 1
Pasteurella_multocida_subsp._multocida_str._Pm70 1 1
Actinobacillus_suis_H91-0380 1 1
Actinobacillus_pleuropneumoniae_serovar_3_str._JL03 1 1
Actinobacillus_pleuropneumoniae_serovar_7_str._AP76 1 1
Vibrio_fischeri_ES114 3 3
Vibrio_sp._EJY3 5 3
Vibrio_parahaemolyticus_BB22OP 1 1
Vibrio_alginolyticus_NBRC_15630_=_ATCC_17749 2 2
Vibrio_anguillarum_Listonella_anguillarum_M3 1 1
Vibrio_nigripulchritudo_VibrioScope 8 8
Vibrio_vulnificus_CMCP6 2 2
Vibrio_vulnificus_YJ016 2 2
Vibrio_cholerae_LMA3984-4 4 3
Vibrio_cholerae_M66-2 4 3
Vibrio_cholerae_O395 4 3
Vibrio_cholerae_IEC224 4 3
Vibrio_cholerae_O1_str._2010EL-1786 4 3
Vibrio_cholerae_MJ-1236 3 3
Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 4 3
Idiomarina_loihiensis_GSL_199 5 3
Shewanella_sp._W3-18-1 5 4
Shewanella_sp._ANA-3 8 7
Shewanella_baltica_BA175 6 4
Shewanella_baltica_OS678 5 3
Shewanella_baltica_OS117 6 4
Shewanella_baltica_OS223 6 4
Shewanella_baltica_OS195 5 3
Shewanella_baltica_OS155 6 4
Shewanella_sp._MR-7 7 4
Shewanella_putrefaciens_200 5 4
Glaciecola_psychrophila_170 6 5
Alteromonas_macleodii_str._'Ionian_Sea_UM4b' 14 7
Alteromonas_macleodii_str._'Ionian_Sea_UM7' 14 7
Alteromonas_macleodii_str._'Ionian_Sea_U8' 14 7
Alteromonas_macleodii_str._'Ionian_Sea_U7' 14 7
Alteromonas_macleodii_str._'Ionian_Sea_U4' 12 6
Alteromonas_macleodii_str._'Aegean_Sea_MED64' 15 8
Alteromonas_macleodii_str._'English_Channel_615' 9 5
Alteromonas_macleodii_AltDE1 14 7
Alteromonas_macleodii_str._'English_Channel_673' 11 7
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 12 7
Alteromonas_macleodii_str._'Black_Sea_11' 13 9
Alteromonas_macleodii_ATCC_27126 12 7
Alcanivorax_dieselolei_B5 8 7
Thalassolituus_oleivorans_MIL-1 2 2
Stenotrophomonas_maltophilia_D457 12 5
Stenotrophomonas_maltophilia_JV3 11 5
Stenotrophomonas_maltophilia_R551-3 13 6
Xylella_fastidiosa_subsp._fastidiosa_GB514 3 2
Xylella_fastidiosa_M12 3 2
Xylella_fastidiosa_Temecula1 3 2
Xylella_fastidiosa_9a5c 4 3
Xanthomonas_citri_subsp._citri_Aw12879 19 12
Xanthomonas_campestris_pv._vesicatoria_str._85-10 23 15
Xanthomonas_axonopodis_pv._citrumelo_F1 23 14
Xanthomonas_axonopodis_Xac29-1 17 12
Xanthomonas_oryzae_pv._oryzicola_BLS256 17 9
Xanthomonas_oryzae_pv._oryzae_MAFF_311018 17 9
Xanthomonas_oryzae_pv._oryzae_KACC_10331 17 9
Xanthomonas_campestris_pv._raphani_756C 20 12
Xanthomonas_campestris_pv._campestris_str._8004 20 12
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 20 12
Thioalkalivibrio_nitratireducens_DSM_14787 3 3
Thioflavicoccus_mobilis_8321 1 1
Coxiella_burnetii_CbuK_Q154 1 1
Coxiella_burnetii_CbuG_Q212 1 1
Coxiella_burnetii_RSA_331 1 1
Coxiella_burnetii_RSA_493 1 1
Rahnella_aquatilis_HX2 1 1
Yersinia_pseudotuberculosis_PB1/+ 1 1
Yersinia_pseudotuberculosis_YPIII 1 1
Yersinia_pseudotuberculosis_IP_32953 1 1
Yersinia_pestis_biovar_Microtus_str._91001 1 1
Yersinia_pestis_A1122 1 1
Yersinia_pestis_Z176003 1 1
Yersinia_pestis_D182038 1 1
Yersinia_pestis_D106004 1 1
Yersinia_pestis_biovar_Medievalis_str._Harbin_35 1 1
Yersinia_pestis_Nepal516 1 1
Yersinia_pestis_Antiqua 1 1
Yersinia_pestis_Angola 1 1
Yersinia_pestis_CO92 1 1
Yersinia_pestis_KIM10+ 1 1
Yersinia_enterocolitica_subsp._palearctica_105.5R(r) 1 1
Yersinia_enterocolitica_subsp._palearctica_Y11 1 1
Serratia_sp._AS13 4 4
Serratia_plymuthica_S13 3 3
Serratia_plymuthica_4Rx13 5 5
Serratia_marcescens_FGI94 3 3
Serratia_marcescens_WW4 2 2
Serratia_liquefaciens_ATCC_27592 2 2
Pectobacterium_carotovorum_subsp._carotovorum_PCC21 1 1
Pantoea_ananatis_LMG_5342 3 3
Pantoea_ananatis_PA13 3 3
Pantoea_ananatis_AJ13355 3 3
Erwinia_pyrifoliae_DSM_12163 2 2
Erwinia_amylovora_CFBP1430 2 2
Cronobacter_sakazakii_CMCC_45402 2 2
Cronobacter_sakazakii_SP291 2 2
Cronobacter_sakazakii_ATCC_BAA-894 2 2
Raoultella_ornithinolytica_B6 2 2
Salmonella_bongori_N268-08 1 1
Salmonella_enterica_subsp._arizonae_serovar_62:z4,z23:--_str._RSK2980 1 1
Salmonella_enterica_subsp._enterica_serovar_4,[5],12:i:-_str._08-1736 1 1
Salmonella_enterica_subsp._enterica_serovar_Javiana_str._CFSAN001992 1 1
Salmonella_enterica_subsp._enterica_serovar_Schwarzengrund_str._CVM19633 1 1
Salmonella_enterica_subsp._enterica_Serovar_Cubana_str._CFSAN002050 1 1
Salmonella_enterica_subsp._enterica_serovar_Enteritidis_str._P125109 1 1
Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67 1 1
Salmonella_enterica_subsp._enterica_serovar_Newport_str._USMARC-S3124.1 1 1
Salmonella_enterica_subsp._enterica_serovar_Newport_str._SL254 1 1
Salmonella_enterica_subsp._enterica_serovar_Dublin_str._CT_02021853 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_var._5-_str._CFSAN001921 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._U288 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._798 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._UK-1 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._ST4/74 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._T000240 1 1
Salmonella_enterica_The_genome_of__subsp._enterica_serovar_Typhimurium_str._DT2 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._D23580 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._14028S 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_Definitive_Type_104 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._P-stx-12 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty21a 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2 1 1
Salmonella_enterica_serovar_Bovismorbificans_genomics 1 1
Salmonella_enterica_subsp._enterica_serovar_Bareilly_str._CFSAN000189 1 1
Salmonella_enterica_subsp._enterica_serovar_Agona_str._24249 1 1
Salmonella_enterica_subsp._enterica_serovar_Agona_str._SL483 1 1
Salmonella_enterica_subsp._enterica_serovar_Weltevreden_str._2007-60-3289-1 1 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_B_str._SPB7 1 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._AKU_12601 1 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._ATCC_9150 1 1
Salmonella_enterica_subsp._enterica_Serovar_Heidelberg_str._CFSAN002069 1 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._B182 1 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._41578 1 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._SL476 1 1
Salmonella_enterica_subsp._enterica_serovar_Pullorum_str._S06004 1 1
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._CDC1983-67 1 1
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._RKS5078 1 1
Salmonella_enterica_subsp._enterica_serovar_Thompson_str._RM6836 1 1
Salmonella_enterica_subsp._enterica_serovar_Gallinarum_str._287/91 1 1
Klebsiella_oxytoca_KCTC_1686 3 3
Klebsiella_pneumoniae_JM45 2 2
Klebsiella_pneumoniae_CG43 3 3
Klebsiella_pneumoniae_KCTC_2242 4 4
Klebsiella_pneumoniae_342 4 4
Klebsiella_pneumoniae_subsp._pneumoniae_1084 4 4
Klebsiella_pneumoniae_subsp._pneumoniae_HS11286 4 4
Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578 3 3
Klebsiella_pneumoniae_subsp._rhinoscleromatis_SB3432 4 4
Enterobacter_aerogenes_EA1509E 1 1
Escherichia_coli_042 1 1
Escherichia_coli_UMN026 1 1
Enterobacter_cloacae_SCF1 1 1
Enterobacter_cloacae_EcWSU1 3 3
Enterobacter_cloacae_subsp._cloacae_ENHKU01 2 2
Enterobacter_cloacae_subsp._cloacae_NCTC_9394 1 1
Enterobacter_cloacae_subsp._cloacae_ATCC_13047 3 3
Azotobacter_vinelandii_CA6 4 4
Azotobacter_vinelandii_CA 4 4
Pseudomonas_denitrificans_ATCC_13867 2 2
Pseudomonas_syringae_pv._phaseolicola_1448A 4 4
Pseudomonas_syringae_pv._syringae_B728a 9 9
Pseudomonas_stutzeri_CCUG_29243 3 3
Pseudomonas_stutzeri_DSM_10701 2 2
Pseudomonas_stutzeri_DSM_4166 4 4
Pseudomonas_stutzeri_RCH2 4 4
Pseudomonas_stutzeri_ATCC_17588_=_LMG_11199 4 4
Pseudomonas_monteilii_SB3101 2 2
Pseudomonas_monteilii_SB3078 2 2
Pseudomonas_putida_H8234 5 5
Pseudomonas_putida_HB3267 2 2
Pseudomonas_putida_NBRC_14164 3 3
Pseudomonas_putida_DOT-T1E 5 5
Pseudomonas_putida_S16 2 2
Pseudomonas_putida_BIRD-1 4 4
Pseudomonas_putida_W619 3 3
Pseudomonas_putida_ND6 5 5
Pseudomonas_putida_KT2440 3 3
Pseudomonas_putida_GB-1 2 2
Pseudomonas_protegens_CHA0 3 3
Pseudomonas_poae_RE*1-1-14 4 4
Pseudomonas_fluorescens_F113 7 7
Pseudomonas_fluorescens_A506 3 3
Pseudomonas_fluorescens_R124 3 3
Pseudomonas_fluorescens_Pf0-1 7 7
Pseudomonas_resinovorans_NBRC_106553 4 4
Pseudomonas_mendocina_NK-01 4 4
Pseudomonas_aeruginosa_SCV20265 4 4
Pseudomonas_aeruginosa_MTB-1 3 3
Pseudomonas_aeruginosa_LES431 3 3
Pseudomonas_aeruginosa_RP73 3 3
Pseudomonas_aeruginosa_B136-33 4 4
Pseudomonas_aeruginosa_PA1R 3 3
Pseudomonas_aeruginosa_PA1 3 3
Pseudomonas_aeruginosa_DK2 4 4
Pseudomonas_aeruginosa_NCGM2.S1 4 4
Pseudomonas_aeruginosa_M18 4 4
Pseudomonas_aeruginosa_LESB58 3 3
Pseudomonas_aeruginosa_PA7 2 2
Pseudomonas_aeruginosa_PAO1 4 4
Acinetobacter_calcoaceticus_ruh2202 1 1
Acinetobacter_baumannii_ZW85-1 2 2
Acinetobacter_baumannii_TYTH-1 2 2
Acinetobacter_baumannii_BJAB0868 2 2
Acinetobacter_baumannii_BJAB0715 2 2
Acinetobacter_baumannii_BJAB07104 2 2
Acinetobacter_baumannii_TCDC-AB0715 2 2
Acinetobacter_baumannii_D1279779 2 2
Acinetobacter_baumannii_MDR-TJ 2 2
Acinetobacter_baumannii_1656-2 2 2
Acinetobacter_baumannii__ATCC_19606 2 2
Acinetobacter_baumannii_AB307-0294 1 1
Acinetobacter_baumannii_AYE 1 1
Acinetobacter_baumannii_SDF 1 1
Acinetobacter_baumannii_MDR-ZJ06 2 2
Acinetobacter_baumannii_AB0057 1 1
Acinetobacter_baumannii_ACICU 2 2
Acinetobacter_radioresistens__SH164 1 1
Acinetobacter_johnsonii__SH046 1 1
Methylophaga_sp._JAM7 3 3
Candidatus_Nitrososphaera_gargensis_Ga9.2 4 4
Candidatus_Nitrosoarchaeum_koreensis_Candidatus_Nitrosopumilus_koreensis_AR1 2 2
Sulfolobus_islandicus_LAL14/1 2 2
Sulfolobus_islandicus_REY15A 2 2
Sulfolobus_islandicus_HVE10/4 2 2
Sulfolobus_islandicus_Y.G.57.14 3 3
Sulfolobus_islandicus_L.S.2.15 1 1
Sulfolobus_islandicus_M.16.27 2 2
Sulfolobus_islandicus_M.14.25 2 2
Sulfolobus_islandicus_M.16.4 2 2
Sulfolobus_islandicus_L.D.8.5 1 1
Sulfolobus_solfataricus_98/2 1 1
Sulfolobus_acidocaldarius_SUSAZ 1 1
Sulfolobus_acidocaldarius_Ron12/I 1 1
Sulfolobus_acidocaldarius_N8 1 1
Methanomethylovorans_hollandica_DSM_15978 2 2
Methanoregula_formicica_Methanoregula_formicicum_SMSP 4 4
Thermococcus_sp._AM4 1 1
Ferroplasma_acidarmanus_fer1 1 1
Halovivax_ruber_XH-70 1 1
Haloquadratum_walsbyi_C23 1 1

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Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   10 10
Pan_troglodytes_69_2.1.4   (Chimpanzee)   6 6
Gorilla_gorilla_69_3.1   (Western gorilla)   8 8
Pongo_abelii_69_2   (Sumatran orangutan)   9 9
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   8 8
Macaca_mulatta_69_1   (Rhesus monkey)   7 7
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   8 8
Otolemur_garnettii_69_3   (Small-eared galago)   11 11
Microcebus_murinus_69_1   (Gray mouse lemur)   8 7
Rattus_norvegicus_69_3.4   (Norway rat)   8 8
Mus_musculus_69_38   (House mouse)   9 9
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   8 7
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   10 10
Cavia_porcellus_69_3   (Domestic guinea pig)   8 8
Oryctolagus_cuniculus_69_2   (Rabbit)   10 10
Ochotona_princeps_69   (American pika)   7 6
Tupaia_belangeri_69   (Northern tree shrew)   8 7
Sus_scrofa_69_10.2   (Pig)   12 12
Bos_taurus_69_3.1   (Cattle)   10 10
Vicugna_pacos_69_1   (Alpaca)   11 10
Tursiops_truncatus_69_1   (Bottlenose dolphin)   12 12
Mustela_putorius_furo_69_1.0   (Domestic ferret)   8 8
Ailuropoda_melanoleuca_69_1   (Giant panda)   9 9
Canis_familiaris_69_3.1   (Dog)   11 11
Felis_catus_69   (Domestic cat)   12 10
Equus_caballus_69_2   (Horse)   8 8
Myotis_lucifugus_69_2.0   (Little brown bat)   8 8
Pteropus_vampyrus_69_1   (Large flying fox)   8 7
Sorex_araneus_69_1   (European shrew)   8 8
Erinaceus_europaeus_69   (Western European hedgehog)   8 6
Procavia_capensis_69_1   (Cape rock hyrax)   9 8
Loxodonta_africana_69_3   (African savanna elephant)   10 10
Echinops_telfairi_69   (Small Madagascar hedgehog)   7 7
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   9 9
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   6 6
Macropus_eugenii_69_1.0   (Tammar wallaby)   10 9
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   7 7
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   8 8
Ornithorhynchus_anatinus_69_5   (Platypus)   6 6
Petromyzon_marinus_69_7.0   (Sea lamprey)   5 5
Meleagris_gallopavo_69_2   (Turkey)   6 6
Gallus_gallus_69_2   (Chicken)   6 6
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   6 6
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   6 6
Anolis_carolinensis_69_2.0   (Green anole)   7 7
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   8 8
Latimeria_chalumnae_69_1   (Coelacanth)   6 6
Gadus_morhua_69_1   (Atlantic cod)   6 6
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   6 6
Takifugu_rubripes_69_4   (Torafugu)   12 12
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   8 8
Oryzias_latipes_69_1   (Japanese medaka)   9 9
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   12 12
Oreochromis_niloticus_69_1.0   (Nile tilapia)   7 7
Danio_rerio_69_9   (Zebrafish)   8 8
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   7 7
Ciona_intestinalis_69   (Vase tunicate)   11 11
Drosophila_melanogaster_69_5   (Fruit fly)   9 9
Caenorhabditis_elegans_69_215   (Roundworm)   25 10
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   2 2
Arabidopsis_thaliana_10   (Thale cress)   19 19

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   28 28
Homo_sapiens__(NCBI_version)   (Human)   13 13
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   9 9
Heliconius_numata__(Incomplete) 11 11
Loa_loa_v3.3_(Request)   (Eye worm)   8 8
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   4 4
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   4 4
Moniliophthora_perniciosa_FA553__(Genome_survey) 3 3
Picea_sitchensis__(Incomplete)   (Sitka spruce)   4 4
Lotus_japonicus__(Early_assembly) 15 15
Malus_x_domestica_(Duplicate)   (Apple)   27 27
Ricinus_communis__(Early_assembly)   (Castor bean)   21 21
Nicotiana_benthamiana_0.4.4_(Early_draft) 30 30
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   16 16
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   17 17
Phoenix_dactylifera__(Early_draft)   (Date palm)   5 5
Mycobacterium_tuberculosis_H37Rv_(Duplicate_of_ex) 1 1
Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 1 1
NCBI_plasmid_sequences_(Plasmids) 209 194
Protozoadb_2010_08_(Protozoadb) 44 44
Protein_Data_Bank_(all_PDB_sequenc) 236 196
Core_Eukaryotic_Genes_458_(CEGMA) 1 1
STRING_v9.0.5_(STRING) 3728 3214
NCBI_viral_sequences_(Viral) 3 3
Uniprot_2018_03_genome 103058 85483
NCBI_2017_08_genome 194301 170537
PDB_chains_(SCOP_1.75)_(PDB) 6 6
TargetDB__(Targets) 324 295
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 389 371

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.