SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for Outer capsid protein sigma 3 superfamily in groups of genomes

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Outer capsid protein sigma 3 domain in that genome.

Complete genomes
Genome     Number   Proteins
Mesorhizobium_sp._BNC1 1 1

Strains
Genome     Number   Proteins
Alteromonas_macleodii_str._'Aegean_Sea_MED64' 1 1
Alteromonas_macleodii_str._'English_Channel_615' 1 1

Others
Genome     Number   Proteins
NCBI_plasmid_sequences_(Plasmids) 1 1
STRING_v9.0.5_(STRING) 1 1
PDB_chains_(SCOP_1.75)_(PDB) 2 2
NCBI_viral_sequences_(Viral) 7 7
Protein_Data_Bank_(all_PDB_sequenc) 15 15
NCBI_2017_08_genome 17 17
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 45 40
UniProt__viral_sequences_(Viral) 137 137
Uniprot_2018_03_genome 334 334

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