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Domain combinations for AhpD-like superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a AhpD-like domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   7 7
Pan_troglodytes_76_2.1.4   (Chimpanzee)   3 3
Gorilla_gorilla_76_3.1   (Western gorilla)   4 4
Pongo_abelii_76_2   (Sumatran orangutan)   3 3
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   4 4
Papio_anubis_76   (Olive baboon)   4 4
Macaca_mulatta_76_1   (Rhesus monkey)   4 4
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   7 7
Otolemur_garnettii_76_3   (Small-eared galago)   4 4
Microcebus_murinus_76_1   (Gray mouse lemur)   2 2
Rattus_norvegicus_76_5.0   (Norway rat)   3 3
Mus_musculus_76_38   (House mouse)   4 4
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   3 3
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   4 4
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   4 4
Cavia_porcellus_76_3   (Domestic guinea pig)   3 3
Oryctolagus_cuniculus_76_2   (Rabbit)   4 4
Ochotona_princeps_76   (American pika)   3 3
Tupaia_belangeri_76   (Northern tree shrew)   2 2
Sus_scrofa_76_10.2   (Pig)   4 4
Bos_taurus_76_3.1   (Cattle)   5 5
Ovis_aries_76_3.1   (Sheep)   5 5
Vicugna_pacos_76_1   (Alpaca)   3 3
Tursiops_truncatus_76_1   (Bottlenose dolphin)   3 3
Mustela_putorius_furo_76_1.0   (Domestic ferret)   3 3
Ailuropoda_melanoleuca_76_1   (Giant panda)   4 4
Canis_familiaris_76_3.1   (Dog)   4 4
Felis_catus_76_6.2   (Domestic cat)   3 3
Equus_caballus_76_2   (Horse)   4 4
Myotis_lucifugus_76_2.0   (Little brown bat)   3 3
Pteropus_vampyrus_76_1   (Large flying fox)   3 3
Sorex_araneus_76_1   (European shrew)   3 3
Erinaceus_europaeus_76   (Western European hedgehog)   3 3
Procavia_capensis_76_1   (Cape rock hyrax)   3 3
Loxodonta_africana_76_3   (African savanna elephant)   6 6
Echinops_telfairi_76   (Small Madagascar hedgehog)   2 2
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   3 3
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   2 2
Macropus_eugenii_76_1.0   (Tammar wallaby)   3 3
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   5 5
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   4 4
Ornithorhynchus_anatinus_76_5   (Platypus)   5 5
Saccoglossus_kowalevskii_v3.0 2 2
Meleagris_gallopavo_76_2   (Turkey)   3 3
Gallus_gallus_76_4   (Chicken)   4 4
Anas_platyrhynchos_76_1.0   (Mallard)   6 6
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   4 4
Ficedula_albicollis_76_1.0   (Collared flycatcher)   4 4
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   7 7
Anolis_carolinensis_76_2.0   (Green anole)   4 4
Xenopus_laevis_   (African clawed frog)   11 11
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   3 3
Latimeria_chalumnae_76_1   (Coelacanth)   6 6
Lepisosteus_oculatus_76   (Spotted gar)   5 5
Gadus_morhua_76_1   (Atlantic cod)   4 4
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   4 4
Takifugu_rubripes_76_4   (Torafugu)   8 8
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   6 6
Oryzias_latipes_76_1   (Japanese medaka)   4 4
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   4 4
Poecilia_formosa_76   (Amazon molly)   4 4
Oreochromis_niloticus_76_1.0   (Nile tilapia)   3 3
Astyanax_mexicanus_76   (Mexican tetra)   3 3
Danio_rerio_76_9   (Zebrafish)   9 9
Oikopleura_dioica 1 1
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   3 3
Ciona_intestinalis_76   (Vase tunicate)   1 1
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   5 5
Adineta_vaga 2 2
Octopus_bimaculoides_280 3 3
Crassostrea_gigas_22   (Pacific oyster)   2 2
Lottia_gigantea_   (Owl limpet)   1 1
Helobdella_robusta_ 2 2
Capitella_sp._I_ 4 4
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   4 4
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   1 1
Linepithema_humile_v1.1   (Argentine ant)   2 2
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   1 1
Solenopsis_invicta_v.2.2.3   (Red fire ant)   1 1
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   1 1
Atta_cephalotes_v1.1 1 1
Camponotus_floridanus_v3.3   (Florida carpenter ant)   1 1
Lucilia_cuprina   (Australian sheep blowfly)   1 1
Drosophila_grimshawi_1.3 1 1
Drosophila_willistoni_1.3 1 1
Drosophila_pseudoobscura_2.13 1 1
Drosophila_persimilis_1.3 1 1
Drosophila_suzukii 1 1
Drosophila_yakuba_1.3 1 1
Drosophila_simulans_1.3 1 1
Drosophila_sechellia_1.3 1 1
Drosophila_melanogaster_76_5   (Fruit fly)   3 3
Drosophila_erecta_1.3 1 1
Drosophila_ananassae_1.3 1 1
Drosophila_virilis_1.2 1 1
Drosophila_mojavensis_1.3 1 1
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   1 1
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   1 1
Anopheles_darlingi_22   (American malaria mosquito)   1 1
Anopheles_gambiae_49_3j   (African malaria mosquito)   2 2
Tribolium_castaneum_3.0   (Red flour beetle)   1 1
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   1 1
Acyrthosiphon_pisum_   (Pea aphid)   1 1
Rhodnius_prolixus_22 1 1
Daphnia_pulex_   (Common water flea)   1 1
Strigamia_maritima_22 1 1
Sarcoptes_scabiei 1 1
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   1 1
Onchocerca_volvulus_22 1 1
Caenorhabditis_japonica_ 6 6
Caenorhabditis_brenneri_ 2 2
Caenorhabditis_remanei_ 1 1
Caenorhabditis_elegans_76_235   (Roundworm)   2 2
Caenorhabditis_briggsae_2 1 1
Hymenolepis_microstoma_ 2 2
Echinococcus_multilocularis_ 1 1
Echinococcus_granulosus_ 1 1
Taenia_solium_   (Pork tapeworm)   1 1
Schistosoma_mansoni_ 1 1
Mnemiopsis_leidyi   (Sea walnut)   1 1
Acropora_digitifera_v1.0 2 2
Nematostella_vectensis_1.0   (Starlet sea anemone)   3 3
Hydra_vulgaris 1 1
Amphimedon_queenslandica 2 2
Trichoplax_adhaerens_ 1 1
Monosiga_brevicollis_ 1 1
Sphaeroforma_arctica_JP610_ 1 1
Capsaspora_owczarzaki_ATCC_30864_ 1 1
Conidiobolus_coronatus_NRRL28638_v1.0 2 2
Mortierella_verticillata_NRRL_6337_ 2 2
Phycomyces_blakesleeanus_ 3 3
Rhizopus_oryzae_RA_99-880_ 2 2
Mucor_circinelloides_ 2 2
Rhizomucor_miehei_CAU432_ 3 3
Malassezia_globosa_CBS_7966_ 2 2
Sporisorium_reilianum_22 2 2
Ustilago_maydis_ 4 4
Mixia_osmundae_IAM_14324_v1.0 3 3
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 2 2
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 1 1
Melampsora_laricis-populina_ 2 2
Rhodotorula_graminis_WP1_v1.0 3 3
Sporobolomyces_roseus_IAM_13481_ 2 2
Microbotryum_violaceum_22 3 3
Wallemia_sebi_v1.0 1 1
Sphaerobolus_stellatus_v1.0 10 10
Piloderma_croceum_F_1598_v1.0 7 7
Serpula_lacrymans_var._lacrymans_S7.9_ 2 2
Coniophora_puteana 5 5
Hydnomerulius_pinastri_v2.0 2 2
Paxillus_rubicundulus_Ve08.2h10_v1.0 1 1
Pisolithus_microcarpus_441_v1.0 1 1
Pisolithus_tinctorius_Marx_270_v1.0 1 1
Scleroderma_citrinum_Foug_A_v1.0 1 1
Coprinopsis_cinerea_okayama7_130_v3 2 2
Pleurotus_ostreatus_   (Oyster mushroom)   3 3
Amanita_thiersii_Skay4041_v1.0 3 3
Amanita_muscaria_Koide_v1.0   (Fly agaric)   2 2
Galerina_marginata_v1.0 3 3
Hebeloma_cylindrosporum_h7_v2.0 3 3
Laccaria_bicolor_S238N-H82_ 2 2
Agaricus_bisporus_var._bisporus_ 3 3
Schizophyllum_commune_ 1 1
Stereum_hirsutum_FP-91666_SS1__v1.0 5 5
Heterobasidion_annosum_ 3 3
Gloeophyllum_trabeumv1.0 3 3
Punctularia_strigosozonata_v1.0 2 2
Fomitiporia_mediterranea_v1.0 7 7
Tulasnella_calospora_AL13/4D_v1.0 1 1
Postia_placenta_ 1 1
Wolfiporia_cocos_MD-104_SS10__v1.0 5 5
Fomitopsis_pinicolav1.0 1 1
Fomitopsis_pinicola_FP-58527_SS1_v3.0 1 1
Phanerochaete_chrysosporium_RP-78_2.1 2 2
Dichomitus_squalens 5 5
Trametes_versicolor_v1.0 3 3
Tremella_mesenterica_   (Witches' butter)   1 1
Daldinia_eschscholzii_EC12_v1.0 2 2
Apiospora_montagnei_NRRL_25634_v1.0 6 6
Magnaporthe_poae_ATCC_64411_22 3 3
Magnaporthe_grisea_70-15_ 2 2
Podospora_anserina_ 5 5
Sporotrichum_thermophile_ATCC_42464_ 2 2
Thielavia_terrestris_NRRL_8126_ 2 2
Chaetomium_globosum_CBS_148.51_ 4 4
Neurospora_tetrasperma_ 2 2
Neurospora_discreta_FGSC_8579_ 1 1
Neurospora_crassa_OR74A_ 2 2
Cryphonectria_parasitica_   (Chestnut blight fungus)   5 5
Verticillium_albo-atrum_VaMs.102_ 4 4
Verticillium_dahliae_VdLs.17_ 4 4
Acremonium_alcalophilumv_1.0 4 4
Glomerella_graminicola_22 4 4
Fusarium_graminearum_ 5 5
Nectria_haematococca_mpVI_ 9 9
Fusarium_oxysporum_f._sp._lycopersici_4286_ 11 11
Fusarium_verticillioides_7600_ 6 6
Trichoderma_asperellum_CBS_433.97_v1.0 3 3
Trichoderma_atroviride_ 5 5
Trichoderma_citrinoviride_v1.0 3 3
Trichoderma_reesei_1.2 3 3
Trichoderma_virens_Gv29-8_ 4 4
Trichoderma_longibrachiatum_ATCC_18648_v1.0 3 3
Trichoderma_harzianum_CBS_226.95_v1.0 6 6
Amorphotheca_resinae_v1.0   (Creosote fungus)   5 5
Botrytis_cinerea_B05.10_ 2 2
Sclerotinia_sclerotiorum_ 2 2
Blumeria_graminis_22 1 1
Didymella_exigua_CBS_183.55_v1.0 8 8
Leptosphaeria_maculans_22 7 7
Setosphaeria_turcica_v1.0 7 7
Cochliobolus_miyabeanus_ATCC_44560_v1.0 6 6
Cochliobolus_victoriae_FI3_v1.0 6 6
Cochliobolus_carbonum_26-R-13_v1.0 6 6
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   5 5
Alternaria_brassicicola_ 6 6
Cochliobolus_lunatus_m118_v2.0 5 5
Pyrenophora_teres_f._teres_22 6 6
Pyrenophora_tritici-repentis_ 6 6
Stagonospora_nodorum_ 7 7
Mycosphaerella_graminicola_IPO323_ 5 5
Zasmidium_cellare_ATCC_36951_v1.0 11 11
Dothistroma_septosporum 9 9
Septoria_musiva_v1.0 4 4
Mycosphaerella_fijiensis_CIRAD86_ 6 6
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 4 4
Paracoccidioides_brasiliensis_Pb18_ 3 3
Coccidioides_posadasii_RMSCC_3488_ 4 4
Coccidioides_immitis_RS_ 4 4
Ajellomyces_dermatitidis_SLH14081_ 4 4
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 2 2
Microsporum_canis_CBS_113480_ 3 3
Trichophyton_verrucosum_HKI_0517_ 1 1
Arthroderma_benhamiae_CBS_112371_ 1 1
Trichophyton_tonsurans_CBS_112818_ 1 1
Trichophyton_rubrum_CBS_118892_ 2 2
Uncinocarpus_reesii_1704_ 2 2
Aspergillus_zonatus_v1.0 4 4
Penicillium_chrysogenum_Wisconsin_54-1255_ 8 8
Penicillium_chrysogenum_v1.0 6 6
Aspergillus_acidus_v1.0 9 9
Aspergillus_fumigatus_Af293 5 5
Aspergillus_brasiliensis_v1.0 7 7
Aspergillus_nidulans_FGSC_A4_ 5 5
Aspergillus_sydowii_v1.0 14 14
Aspergillus_versicolor_v1.0 10 10
Aspergillus_glaucus 6 6
Aspergillus_carbonarius_ITEM_5010_ 7 7
Neosartorya_fischeri_NRRL_181_ 6 6
Aspergillus_terreus_NIH2624_ 9 9
Aspergillus_tubingensis_v1.0 8 8
Aspergillus_wentii_v1.0 8 8
Aspergillus_oryzae_RIB40_ 5 5
Aspergillus_niger_22 5 5
Aspergillus_niger_ATCC_1015_ 7 7
Aspergillus_flavus_NRRL3357_ 6 6
Aspergillus_clavatus_NRRL_1_ 5 5
Penicillium_marneffei_ATCC_18224_ 5 5
Tuber_melanosporum_Mel28_22 1 1
Tuber_melanosporum_Vittad_   (Perigord truffle)   1 1
Hansenula_polymorpha_v2.0 1 1
Dekkera_bruxellensis_CBS_2499_v2.0 1 1
Pichia_membranifaciensv1.0 1 1
Candida_tanzawaensis_NRRL_Y-17324__v1.0 1 1
Candida_dubliniensis_CD36_ 2 2
Candida_tropicalis_MYA-3404_ 2 2
Candida_parapsilosis_ 3 3
Candida_albicans_SC5314 2 2
Lodderomyces_elongisporus_NRRL_YB-4239_ 2 2
Babjeviella_inositovora_NRRL_Y-12698_v1.0 1 1
Pichia_stipitis_CBS_6054_ 1 1
Candida_guilliermondii_ATCC_6260_ 1 1
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 1 1
Debaromyces_hansenii 1 1
Wickerhamomyces_anomalus 1 1
Pichia_pastoris_GS115_ 1 1
Candida_lusitaniae_ATCC_42720_ 1 1
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 1 1
Vanderwaltozyma_polyspora_DSM_70294_ 1 1
Candida_glabrata_CBS138 1 1
Kluyveromyces_thermotolerans_CBS_6340 1 1
Lachancea_kluyveri_ 1 1
Kluyveromyces_waltii 1 1
Ashbya_gossypii_ATCC_10895_ 1 1
Zygosaccharomyces_rouxii_ 1 1
Saccharomyces_mikatae_MIT 1 1
Saccharomyces_paradoxus_MIT 1 1
Saccharomyces_cerevisiae_76   (Baker's yeast)   1 1
Saccharomyces_bayanus_MIT 1 1
Kluyveromyces_lactis 1 1
Schizosaccharomyces_cryophilus_OY26_22 1 1
Schizosaccharomyces_octosporus_yFS286_ 1 1
Schizosaccharomyces_japonicus_yFS275_ 1 1
Schizosaccharomyces_pombe   (Fission yeast)   1 1
Catenaria_anguillulae_PL171_v1.0 1 1
Allomyces_macrogynus_ATCC_38327_ 4 4
Spizellomyces_punctatus_DAOM_BR117_ 1 1
Dictyostelium_discoideum 1 1
Dictyostelium_purpureum_ 1 1
Coccomyxa_subellipsoidea_sp._C-169_v2 2 2
Chlorella_variabilis_sp._NC64A_ 1 1
Chlorella_vulgaris_ 2 2
Micromonas_pusilla_CCMP1545_v3.0 1 1
Porphyridium_purpureum_02_2012 2 2
Thecamonas_trahens_ATCC_50062_ 1 1
Bigelowiella_natans_CCMP2755_22 4 4
Cyanophora_paradoxa_ 3 3
Leishmania_mexicana_2.4 1 1
Leishmania_major_strain_Friedlin_ 1 1
Leishmania_infantum_JPCM5_2.4 1 1
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 1 1
Trypanosoma_vivax_ 1 1
Trypanosoma_cruzi_strain_CL_Brener 1 1
Trypanosoma_congolense_2.4 1 1
Trypanosoma_brucei_gambiense_v4.1 1 1
Trypanosoma_brucei_TREU927_v4.1 1 1
Ectocarpus_siliculosus 5 3
Aureococcus_anophagefferens_ 1 1
Albugo_laibachii_22 2 2
Pythium_iwayamai_DAOM_BR242034_22 1 1
Pythium_arrhenomanes_ATCC_12531_22 3 3
Pythium_ultimum_v1.7-2 1 1
Pythium_aphanidermatum_DAOM_BR444_22 2 2
Pythium_irregulare_DAOM_BR486_22 1 1
Pythium_vexans_DAOM_BR484_22 1 1
Phytophthora_ramorum_1.1   (Sudden oak death agent)   1 1
Phytophthora_sojae_1.1 1 1
Phytophthora_infestans_T30-4_ 1 1
Phytophthora_capsici_ 2 2
Hyaloperonospora_arabidopsidis_22 1 1
Fragilariopsis_cylindrus 2 2
Thalassiosira_pseudonana_CCMP1335 2 2
Perkinsus_marinus_ATCC_50983_ 3 3
Paramecium_tetraurelia_ 2 2
Tetrahymena_thermophila_SB210_1_ 5 5
Ichthyophthirius_multifiliis_strain_G5_ 1 1
Cryptosporidium_hominis 1 1
Cryptosporidium_muris 1 1
Cryptosporidium_parvum_Iowa_II 1 1
Symbiodinium_minutum_clade_B1_v1.2 1 1
Naegleria_gruberi_ 2 2
Trichomonas_vaginalis_ 3 3
Guillardia_theta_CCMP2712_v1.0_ 3 3
Emiliania_huxleyi_CCMP1516_ 3 3
Pseudanabaena_sp._PCC_7367 2 1
Acaryochloris_marina_MBIC11017 3 3
Synechocystis_sp._PCC_6803 1 1
Thermosynechococcus_sp._NK55 1 1
Thermosynechococcus_elongatus_BP-1 1 1
Synechococcus_sp._PCC_7502 1 1
Synechococcus_sp._PCC_6312 3 3
Microcoleus_sp._PCC_7113 2 2
Trichodesmium_erythraeum_IMS101 1 1
Geitlerinema_sp._PCC_7407 1 1
Gloeocapsa_sp._PCC_7428 3 3
Halothece_sp._PCC_7418 1 1
Gloeobacter_violaceus_PCC_7421 2 2
Rivularia_sp._PCC_7116 5 4
Calothrix_sp._PCC_7507 1 1
Anabaena_variabilis_ATCC_29413 1 1
'Nostoc_azollae'_0708 1 1
Nostoc_sp._PCC_7107 3 3
Nostoc_punctiforme_PCC_73102 4 4
Nostoc_sp._PCC_7120 2 2
Mycoplasma_penetrans_HF-2 1 1
Mycoplasma_arthritidis_158L3-1 1 1
Conexibacter_woesei_DSM_14684 7 7
Eggerthella_sp._YY7918 2 2
Eggerthella_lenta_DSM_2243 2 2
Slackia_heliotrinireducens_DSM_20476 1 1
Rubrobacter_xylanophilus_DSM_9941 5 5
Ilumatobacter_coccineus 9 9
Acidimicrobium_ferrooxidans_DSM_10331 3 3
Thermobispora_bispora_DSM_43833 4 4
Nakamurella_multipartita_DSM_44233 1 1
Acidothermus_cellulolyticus_11B 3 3
Modestobacter_marinus 5 5
Blastococcus_saxobsidens_DD2 6 6
Geodermatophilus_obscurus_DSM_43160 4 4
Kineococcus_radiotolerans_SRS30216 2 1
Catenulispora_acidiphila_DSM_44928 16 16
Stackebrandtia_nassauensis_DSM_44728 10 10
Frankia_symbiont_of_Datisca_glomerata 2 2
Frankia_sp._EAN1pec 24 20
Frankia_alni_ACN14a 5 5
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 5 5
Thermomonospora_curvata_DSM_43183 7 7
Streptosporangium_roseum_DSM_43021 20 20
Kitasatospora_setae_KM-6054 8 8
Streptomyces_coelicolor_A3(2) 12 12
Streptomyces_sp._PAMC26508 7 7
Streptomyces_flavogriseus_ATCC_33331 7 7
Streptomyces_sp._SirexAA-E 6 6
Streptomyces_griseus_subsp._griseus_NBRC_13350 9 9
Streptomyces_bingchenggensis_BCW-1 22 20
Streptomyces_violaceusniger_Tu_4113 12 12
Streptomyces_avermitilis_MA-4680 10 10
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 11 11
Streptomyces_scabiei_87.22 8 8
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 12 12
Actinosynnema_mirum_DSM_43827 8 7
Saccharomonospora_viridis_DSM_43017 1 1
Pseudonocardia_dioxanivorans_CB1190 25 23
Saccharopolyspora_erythraea_NRRL_2338 6 6
Amycolatopsis_mediterranei_U32 23 23
Kribbella_flavida_DSM_17836 5 5
Nocardioides_sp._JS614 10 10
Propionibacterium_propionicum_F0230a 1 1
Microlunatus_phosphovorus_NM-1 4 4
Propionibacterium_freudenreichii_subsp._shermanii_CIRM-BIA1 2 2
Salinispora_arenicola_CNS-205 4 3
Salinispora_tropica_CNB-440 5 5
Verrucosispora_maris_AB-18-032 9 8
Micromonospora_sp._L5 6 6
Micromonospora_aurantiaca_ATCC_27029 6 6
Actinoplanes_sp._N902-109 6 6
Actinoplanes_sp._SE50/110 4 4
Actinoplanes_missouriensis_431 6 6
Segniliparus_rotundus_DSM_44985 4 4
Tsukamurella_paurometabola_DSM_20162 5 5
Gordonia_sp._KTR9 8 8
Gordonia_polyisoprenivorans_VH2 8 8
Gordonia_bronchialis_DSM_43247 7 7
Rhodococcus_jostii_RHA1 21 21
Rhodococcus_equi_103S 10 10
Rhodococcus_opacus_B4 16 16
Rhodococcus_erythropolis_PR4 12 12
Nocardia_cyriacigeorgica_GUH-2 8 7
Nocardia_farcinica_IFM_10152 10 10
Amycolicicoccus_subflavus_DQS3-9A1 6 6
Mycobacterium_massiliense_str._GO_06 4 4
Mycobacterium_abscessus_ATCC_19977 13 13
Mycobacterium_sp._JLS 15 15
Mycobacterium_intracellulare_ATCC_13950 17 17
Mycobacterium_avium_104 14 14
Mycobacterium_vanbaalenii_PYR-1 18 17
Mycobacterium_canettii_CIPT_140010059 8 7
Mycobacterium_africanum_GM041182 9 8
Mycobacterium_tuberculosis_KZN_1435 8 7
Mycobacterium_tuberculosis 9 8
Mycobacterium_bovis_BCG_str._Pasteur_1173P2 8 7
Mycobacterium_rhodesiae_NBB3 21 20
Mycobacterium_ulcerans_Agy99 10 10
Mycobacterium_gilvum_PYR-GCK 14 14
Mycobacterium_chubuense_NBB4 11 11
Mycobacterium_marinum_M 15 15
Mycobacterium_smegmatis_str._MC2_155 16 16
Mycobacterium_leprae_Br4923 1 1
Corynebacterium_resistens_DSM_45100 2 2
Corynebacterium_aurimucosum_ATCC_700975 3 2
Corynebacterium_kroppenstedtii_DSM_44385 2 2
Corynebacterium_efficiens_YS-314 5 4
Corynebacterium_ulcerans_0102 1 1
Corynebacterium_urealyticum_DSM_7109 3 3
Corynebacterium_jeikeium_K411 1 1
Corynebacterium_variabile_DSM_44702 5 4
Corynebacterium_pseudotuberculosis_316 1 1
Corynebacterium_glutamicum_R 5 4
Corynebacterium_diphtheriae_NCTC_13129 1 1
Sanguibacter_keddieii_DSM_10542 1 1
Kytococcus_sedentarius_DSM_20547 1 1
Beutenbergia_cavernae_DSM_12333 4 4
Microbacterium_testaceum_StLB037 3 3
Clavibacter_michiganensis_subsp._michiganensis_NCPPB_382 3 3
Intrasporangium_calvum_DSM_43043 4 4
Brachybacterium_faecium_DSM_4810 5 4
Xylanimonas_cellulosilytica_DSM_15894 1 1
Arthrobacter_phenanthrenivorans_Sphe3 3 3
Arthrobacter_chlorophenolicus_A6 2 2
Arthrobacter_aurescens_TC1 3 3
Arthrobacter_arilaitensis_Re117 2 2
Kocuria_rhizophila_DC2201 1 1
Rothia_mucilaginosa_DY-18 1 1
Rothia_dentocariosa_ATCC_17931 3 3
Arthrobacter_sp._Rue61a 4 4
Arthrobacter_sp._FB24 3 3
Renibacterium_salmoninarum_ATCC_33209 2 2
Micrococcus_luteus_NCTC_2665 1 1
Bifidobacterium_animalis_subsp._lactis_Bl-04 2 2
Bifidobacterium_dentium_Bd1 1 1
Bifidobacterium_bifidum_S17 1 1
Bifidobacterium_adolescentis_ATCC_15703 1 1
Arcanobacterium_haemolyticum_DSM_20595 1 1
Actinomyces_sp._F0330 3 3
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 3 3
Dehalococcoides_ethenogenes_195 1 1
Dehalococcoides_sp._BAV1 1 1
Dehalogenimonas_lykanthroporepellens_BL-DC-9 1 1
Thermomicrobium_roseum_DSM_5159 1 1
Sphaerobacter_thermophilus_DSM_20745 4 4
Herpetosiphon_aurantiacus_DSM_785 1 1
Roseiflexus_sp._RS-1 2 2
Roseiflexus_castenholzii_DSM_13941 2 2
Chloroflexus_sp._MS-G 2 2
Chloroflexus_sp._Y-400-fl 3 3
Chloroflexus_aggregans_DSM_9485 1 1
Chloroflexus_aurantiacus_J-10-fl 3 3
Truepera_radiovictrix_DSM_17093 2 2
Deinococcus_gobiensis_I-0 3 3
Deinococcus_deserti_VCD115 5 5
Deinococcus_maricopensis_DSM_21211 2 2
Deinococcus_geothermalis_DSM_11300 3 3
Deinococcus_proteolyticus_MRP 2 2
Deinococcus_radiodurans_R1 3 3
Oceanithermus_profundus_DSM_14977 1 1
Marinithermus_hydrothermalis_DSM_14884 4 4
Meiothermus_silvanus_DSM_9946 4 4
Meiothermus_ruber_DSM_1279 4 4
Thermus_sp._CCB_US3_UF1 3 3
Thermus_scotoductus_SA-01 3 3
Thermus_thermophilus_HB27 3 3
Finegoldia_magna_ATCC_29328 1 1
Veillonella_parvula_DSM_2008 3 3
Megasphaera_elsdenii_DSM_20460 2 2
Acidaminococcus_intestini_RyC-MR95 3 3
Acidaminococcus_fermentans_DSM_20731 1 1
Megamonas_hypermegale 1 1
Selenomonas_ruminantium_subsp._lactilytica_TAM6421 1 1
Erysipelothrix_rhusiopathiae_str._Fujisawa 1 1
Natranaerobius_thermophilus_JW/NM-WN-LF 1 1
Eubacterium_siraeum 1 1
Ethanoligenens_harbinense_YUAN-3 1 1
Ruminococcus_sp. 1 1
Ruminococcus_bromii 1 1
Ruminococcus_albus_7 1 1
Thermaerobacter_marianensis_DSM_12885 1 1
Sulfobacillus_acidophilus_DSM_10332 4 4
butyrate-producing_bacterium_SS3/4 1 1
Thermincola_potens_JR 3 3
Pelotomaculum_thermopropionicum_SI 1 1
Desulfosporosinus_acidiphilus_SJ4 3 3
Desulfosporosinus_orientis_DSM_765 5 5
Dehalobacter_sp._DCA 3 3
Dehalobacter_sp._CF 3 3
Syntrophobotulus_glycolicus_DSM_8271 1 1
Desulfitobacterium_hafniense_Y51 5 5
Desulfitobacterium_dehalogenans_ATCC_51507 4 4
Desulfotomaculum_reducens_MI-1 1 1
Desulfotomaculum_acetoxidans_DSM_771 1 1
Desulfotomaculum_kuznetsovii_DSM_6115 1 1
Desulfotomaculum_carboxydivorans_CO-1-SRB 3 3
Desulfotomaculum_ruminis_DSM_2154 1 1
Acetobacterium_woodii_DSM_1030 1 1
Eubacterium_limosum_KIST612 3 3
Clostridium_difficile_630 1 1
Clostridium_saccharolyticum_WM1 1 1
[Ruminococcus]_obeum 1 1
[Ruminococcus]_torques 1 1
Eubacterium_rectale_ATCC_33656 2 2
Coprococcus_sp._ART55/1 2 2
Roseburia_intestinalis 1 1
Syntrophothermus_lipocalidus_DSM_12680 1 1
Syntrophomonas_wolfei_subsp._wolfei_str._Goettingen 1 1
Alkaliphilus_oremlandii_OhILAs 1 1
Alkaliphilus_metalliredigens_QYMF 2 2
Clostridium_ljungdahlii_DSM_13528 4 3
Clostridium_kluyveri_DSM_555 1 1
Clostridium_beijerinckii_NCIMB_8052 5 5
Clostridium_botulinum_A_str._ATCC_3502 2 2
Clostridium_acetobutylicum_ATCC_824 1 1
Mahella_australiensis_50-1_BON 1 1
Thermosediminibacter_oceani_DSM_16646 1 1
Thermoanaerobacterium_xylanolyticum_LX-11 3 3
Thermoanaerobacterium_thermosaccharolyticum_DSM_571 2 2
Thermodesulfobium_narugense_DSM_14796 1 1
Coprothermobacter_proteolyticus_DSM_5265 1 1
Thermoanaerobacter_tengcongensis_MB4 2 2
Carboxydothermus_hydrogenoformans_Z-2901 2 2
Moorella_thermoacetica_ATCC_39073 1 1
Thermoanaerobacter_pseudethanolicus_ATCC_33223 1 1
Thermoanaerobacter_sp._X514 1 1
Thermoanaerobacter_italicus_Ab9 1 1
Thermoanaerobacter_wiegelii_Rt8.B1 1 1
Thermoanaerobacter_brockii_subsp._finnii_Ako-1 1 1
Halothermothrix_orenii_H_168 1 1
Halanaerobium_hydrogeniformans 1 1
Halanaerobium_praevalens_DSM_2228 1 1
Aerococcus_urinae_ACS-120-V-Col10a 1 1
Tetragenococcus_halophilus_NBRC_12172 1 1
Melissococcus_plutonius_DAT561 1 1
Enterococcus_faecium_Aus0004 1 1
Weissella_koreensis_KACC_15510 1 1
Leuconostoc_sp._C2 1 1
Leuconostoc_kimchii_IMSNU_11154 1 1
Leuconostoc_mesenteroides_subsp._mesenteroides_ATCC_8293 1 1
Lactobacillus_casei_ATCC_334 1 1
Lactobacillus_kefiranofaciens_ZW3 1 1
Lactobacillus_crispatus_ST1 1 1
Lactobacillus_rhamnosus_Lc_705 2 2
Lactobacillus_johnsonii_FI9785 1 1
Lactobacillus_sanfranciscensis_TMW_1.1304 1 1
Lactobacillus_ruminis_ATCC_27782 1 1
Lactobacillus_fermentum_IFO_3956 2 2
Lactobacillus_amylovorus_GRL1118 1 1
Lactobacillus_sakei_subsp._sakei_23K 2 2
Lactobacillus_reuteri_DSM_20016 1 1
Lactobacillus_gasseri_ATCC_33323 1 1
Lactobacillus_plantarum_JDM1 2 2
Lactobacillus_buchneri_NRRL_B-30929 1 1
Lactobacillus_buchneri 1 1
Lactobacillus_brevis_ATCC_367 1 1
Lactobacillus_acidophilus_30SC 1 1
Pediococcus_claussenii_ATCC_BAA-344 1 1
Pediococcus_pentosaceus_ATCC_25745 1 1
Lactococcus_lactis_subsp._cremoris_MG1363 2 2
Streptococcus_sp._I-P16 1 1
Streptococcus_sp._I-G2 1 1
Streptococcus_gallolyticus_UCN34 3 3
Streptococcus_pseudopneumoniae_IS7493 1 1
Streptococcus_pasteurianus_ATCC_43144 2 2
Streptococcus_infantarius_subsp._infantarius_CJ18 1 1
Streptococcus_macedonicus_ACA-DC_198 1 1
Streptococcus_mitis_B6 1 1
Streptococcus_uberis_0140J 1 1
Streptococcus_parauberis_KCTC_11537 1 1
Streptococcus_pneumoniae_P1031 1 1
Streptococcus_agalactiae_A909 1 1
Streptococcus_mutans_NN2025 2 2
Streptococcus_thermophilus_LMD-9 1 1
Streptococcus_sanguinis_SK36 1 1
Streptococcus_salivarius_57.I 1 1
Streptococcus_oralis_Uo5 1 1
Streptococcus_gordonii_str._Challis_substr._CH1 1 1
Exiguobacterium_sp._MH3 1 1
Exiguobacterium_sp._AT1b 1 1
Exiguobacterium_sibiricum_255-15 1 1
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_DSM_446 1 1
Brevibacillus_brevis_NBRC_100599 7 7
Paenibacillus_sp._JDR-2 3 3
Paenibacillus_terrae_HPL-003 2 2
Paenibacillus_mucilaginosus_3016 5 5
Paenibacillus_polymyxa_M1 5 5
Listeria_welshimeri_serovar_6b_str._SLCC5334 2 2
Listeria_innocua_Clip11262 1 1
Listeria_seeligeri_serovar_1/2b_str._SLCC3954 3 3
Listeria_monocytogenes_serotype_4b_str._CLIP_80459 1 1
Listeria_ivanovii_subsp._ivanovii_PAM_55 2 2
Solibacillus_silvestris_StLB046 2 2
Lysinibacillus_sphaericus_C3-41 2 2
Oceanobacillus_iheyensis_HTE831 2 1
Anoxybacillus_flavithermus_WK1 1 1
Geobacillus_thermoleovorans_CCB_US3_UF5 1 1
Geobacillus_kaustophilus_HTA426 1 1
Geobacillus_sp._GHH01 1 1
Geobacillus_thermodenitrificans_NG80-2 1 1
Halobacillus_halophilus_DSM_2266 2 2
Bacillus_sp._JS 3 3
Bacillus_sp._1NLA3E 3 3
Bacillus_amyloliquefaciens_FZB42 3 3
Bacillus_atrophaeus_1942 1 1
Bacillus_subtilis_subsp._subtilis_str._168 2 2
Bacillus_licheniformis_DSM_13_=_ATCC_14580 3 3
Bacillus_halodurans_C-125 2 2
Bacillus_weihenstephanensis_KBAB4 5 5
Bacillus_thuringiensis_str._Al_Hakam 3 3
Bacillus_cereus_03BB102 3 3
Bacillus_anthracis_str._A0248 3 3
Bacillus_pseudofirmus_OF4 2 2
Bacillus_clausii_KSM-K16 3 3
Bacillus_cellulosilyticus_DSM_2522 1 1
Bacillus_pumilus_SAFR-032 2 2
Bacillus_megaterium_DSM_319 6 6
Bacillus_coagulans_2-6 3 2
Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305 3 3
Staphylococcus_lugdunensis_HKU09-01 1 1
Staphylococcus_haemolyticus_JCSC1435 1 1
Staphylococcus_epidermidis_RP62A 1 1
Staphylococcus_carnosus_subsp._carnosus_TM300 1 1
Staphylococcus_aureus_subsp._aureus_JH1 1 1
Staphylococcus_aureus 1 1
Gemmatimonas_aurantiaca_T-27 3 3
Melioribacter_roseus_P3M 3 3
Ignavibacterium_album_JCM_16511 6 6
Pelodictyon_phaeoclathratiforme_BU-1 1 1
Chlorobium_phaeobacteroides_DSM_266 1 1
Chlorobaculum_parvum_NCIB_8327 1 1
Chloroherpeton_thalassium_ATCC_35110 1 1
Haliscomenobacter_hydrossis_DSM_1100 5 5
Saprospira_grandis_str._Lewin 1 1
Niastella_koreensis_GR20-10 11 11
Chitinophaga_pinensis_DSM_2588 8 8
Salinibacter_ruber_M8 2 2
Rhodothermus_marinus_DSM_4252 2 2
Flexibacter_litoralis_DSM_6794 4 4
Belliella_baltica_DSM_15883 3 3
Cyclobacterium_marinum_DSM_745 2 2
Marivirga_tractuosa_DSM_4126 1 1
Fibrella_aestuarina 7 7
Leadbetterella_byssophila_DSM_17132 1 1
Dyadobacter_fermentans_DSM_18053 3 3
Cytophaga_hutchinsonii_ATCC_33406 2 2
Spirosoma_linguale_DSM_74 5 5
Runella_slithyformis_DSM_19594 4 4
Parabacteroides_distasonis_ATCC_8503 1 1
Paludibacter_propionicigenes_WB4 2 2
Odoribacter_splanchnicus_DSM_20712 3 3
Bacteroides_sp._CF50 1 1
Prevotella_melaninogenica_ATCC_25845 1 1
Alistipes_finegoldii_DSM_17242 1 1
Bacteroides_salanitronis_DSM_18170 4 4
Bacteroides_helcogenes_P_36-108 1 1
Bacteroides_vulgatus_ATCC_8482 1 1
Bacteroides_thetaiotaomicron_VPI-5482 2 2
Bacteroides_fragilis_YCH46 1 1
Pedobacter_saltans_DSM_12145 3 3
Solitalea_canadensis_DSM_3403 4 4
Pedobacter_heparinus_DSM_2366 2 2
Sphingobacterium_sp._21 8 8
Fluviicola_taffensis_DSM_16823 1 1
Owenweeksia_hongkongensis_DSM_17368 2 2
Zunongwangia_profunda_SM-A87 6 6
Krokinobacter_sp._4H-3-7-5 4 4
Gramella_forsetii_KT0803 5 5
Lacinutrix_sp._5H-3-7-4 5 5
Maribacter_sp._HTCC2170 6 6
Robiginitalea_biformata_HTCC2501 4 4
Croceibacter_atlanticus_HTCC2559 4 4
Aequorivita_sublithincola_DSM_14238 3 3
Zobellia_galactanivorans 5 5
Muricauda_ruestringensis_DSM_13258 7 7
Cellulophaga_algicola_DSM_14237 6 6
Cellulophaga_lytica_DSM_7489 4 4
Polaribacter_sp._MED152 3 3
Weeksella_virosa_DSM_16922 2 2
Flavobacterium_indicum_GPTSA100-9 6 6
Flavobacterium_psychrophilum_JIP02/86 1 1
Flavobacterium_branchiophilum_FL-15 1 1
Flavobacterium_columnare_ATCC_49512 2 2
Flavobacterium_johnsoniae_UW101 4 4
Fibrobacter_succinogenes_subsp._succinogenes_S85 1 1
Candidatus_Protochlamydia_amoebophila_UWE25 1 1
Parachlamydia_acanthamoebae_UV-7 2 2
Simkania_negevensis_Z 1 1
Planctomyces_brasiliensis_DSM_5305 4 3
Planctomyces_limnophilus_DSM_3776 3 2
Rhodopirellula_baltica_SH_1 6 6
Pirellula_staleyi_DSM_6068 2 2
Opitutus_terrae_PB90-1 4 4
Akkermansia_muciniphila_ATCC_BAA-835 2 2
Fretibacterium_fastidiosum 3 3
Anaerobaculum_mobile_DSM_13181 1 1
Turneriella_parva_DSM_21527 3 3
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 1 1
Brachyspira_murdochii_DSM_12563 3 3
Brachyspira_intermedia_PWS/A 3 3
Brachyspira_pilosicoli_95/1000 3 3
Brachyspira_hyodysenteriae_WA1 3 3
Spirochaeta_smaragdinae_DSM_11293 3 3
Spirochaeta_caldaria_DSM_7334 1 1
Treponema_primitia_ZAS-2 2 2
Treponema_succinifaciens_DSM_2489 2 2
Desulfurispirillum_indicum_S5 1 1
Denitrovibrio_acetiphilus_DSM_12809 1 1
Petrotoga_mobilis_SJ95 1 1
Mesotoga_prima_MesG1.Ag.4.2 2 2
Kosmotoga_olearia_TBF_19.5.1 1 1
Fervidobacterium_pennivorans_DSM_9078 1 1
Fervidobacterium_nodosum_Rt17-B1 1 1
Thermosipho_melanesiensis_BI429 1 1
Thermosipho_africanus_TCF52B 1 1
Thermotoga_lettingae_TMO 2 2
Thermotoga_thermarum_DSM_5069 1 1
Thermotoga_sp._RQ2 3 3
Thermotoga_naphthophila_RKU-10 3 3
Thermotoga_petrophila_RKU-1 3 3
Thermotoga_neapolitana_DSM_4359 3 3
Thermotoga_maritima_MSB8 2 2
Sulfurihydrogenibium_sp._YO3AOP1 1 1
Persephonella_marina_EX-H1 1 1
Elusimicrobium_minutum_Pei191 1 1
Caldisericum_exile_AZM16c01 1 1
Candidatus_Chloracidobacterium_thermophilum_B 1 1
Candidatus_Solibacter_usitatus_Ellin6076 9 9
Granulicella_tundricola_MP5ACTX9 5 5
Granulicella_mallensis_MP5ACTX8 3 3
Candidatus_Koribacter_versatilis_Ellin345 14 14
Terriglobus_saanensis_SP1PR4 4 4
Terriglobus_roseus_DSM_18391 1 1
Acidobacterium_capsulatum_ATCC_51196 6 6
Candidatus_Nitrospira_defluvii 3 3
Leptospirillum_ferrooxidans_C2-3 1 1
Sebaldella_termitidis_ATCC_33386 3 3
Ilyobacter_polytropus_DSM_2926 1 1
Acidithiobacillus_ferrivorans_SS3 4 4
Acidithiobacillus_caldus_SM-1 5 5
Acidithiobacillus_ferrooxidans_ATCC_53993 2 2
Nautilia_profundicola_AmH 1 1
Nitratifractor_salsuginis_DSM_16511 2 2
Sulfurospirillum_barnesii_SES-3 1 1
Arcobacter_sp._L 1 1
Arcobacter_nitrofigilis_DSM_7299 2 2
Campylobacter_curvus_525.92 1 1
Campylobacter_sp._03-427 1 1
Sulfuricurvum_kujiense_DSM_16994 1 1
Sulfurimonas_autotrophica_DSM_16294 1 1
Sulfurimonas_denitrificans_DSM_1251 1 1
Wolinella_succinogenes_DSM_1740 1 1
Helicobacter_hepaticus_ATCC_51449 3 3
Nitratiruptor_sp._SB155-2 3 3
Sulfurovum_sp._NBC37-1 4 4
Desulfarculus_baarsii_DSM_2075 2 2
Desulfobacca_acetoxidans_DSM_11109 1 1
Syntrophus_aciditrophicus_SB 1 1
Desulfomonile_tiedjei_DSM_6799 6 6
Syntrophobacter_fumaroxidans_MPOB 1 1
Desulfotalea_psychrophila_LSv54 1 1
Desulfobulbus_propionicus_DSM_2032 1 1
Desulfatibacillum_alkenivorans_AK-01 7 7
Desulfobacterium_autotrophicum_HRM2 2 2
Desulfococcus_oleovorans_Hxd3 3 3
Desulfohalobium_retbaense_DSM_5692 2 2
Desulfomicrobium_baculatum_DSM_4028 2 2
Desulfovibrio_piezophilus 5 5
Desulfovibrio_aespoeensis_Aspo-2 1 1
Desulfovibrio_magneticus_RS-1 3 3
Desulfovibrio_alaskensis_G20 2 2
Desulfovibrio_salexigens_DSM_2638 2 2
Desulfovibrio_africanus_str._Walvis_Bay 4 4
Geobacter_daltonii_FRC-32 4 4
Geobacter_sp._M21 1 1
Geobacter_uraniireducens_Rf4 6 6
Geobacter_lovleyi_SZ 3 3
Geobacter_bemidjiensis_Bem 2 2
Geobacter_sulfurreducens_KN400 2 2
Geobacter_metallireducens_GS-15 2 2
Pelobacter_propionicus_DSM_2379 1 1
Pelobacter_carbinolicus_DSM_2380 2 2
Sorangium_cellulosum_'So_ce_56' 4 4
Anaeromyxobacter_sp._Fw109-5 5 5
Anaeromyxobacter_dehalogenans_2CP-1 3 3
Stigmatella_aurantiaca_DW4/3-1 3 3
Corallococcus_coralloides_DSM_2259 7 7
Myxococcus_xanthus_DK_1622 4 4
Myxococcus_fulvus_HW-1 4 4
Dechloromonas_aromatica_RCB 3 3
Thauera_sp._MZ1T 2 2
Azoarcus_sp._KH32C 7 7
Azoarcus_sp._BH72 3 3
Aromatoleum_aromaticum_EbN1 6 6
Dechlorosoma_suillum_PS 3 3
Pseudogulbenkiania_sp._NH8B 6 6
Laribacter_hongkongensis_HLHK9 3 3
Chromobacterium_violaceum_ATCC_12472 5 5
Neisseria_meningitidis_alpha14 2 2
Neisseria_meningitidis_FAM18 2 2
Neisseria_lactamica_020-06 2 2
Neisseria_gonorrhoeae_NCCP11945 2 2
Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 2 2
beta_proteobacterium_CB 2 2
Methylibium_petroleiphilum_PM1 3 3
Thiomonas_arsenitoxydans 5 5
Thiomonas_intermedia_K12 7 7
Rubrivivax_gelatinosus_IL144 5 5
Leptothrix_cholodnii_SP-6 3 3
Burkholderia_rhizoxinica_HKI_454 1 1
Burkholderia_phytofirmans_PsJN 16 15
Burkholderia_phymatum_STM815 14 14
Burkholderia_xenovorans_LB400 30 29
Ralstonia_eutropha_JMP134 16 16
Cupriavidus_taiwanensis_LMG_19424 10 10
Cupriavidus_metallidurans_CH34 13 13
Cupriavidus_necator_N-1 12 11
Ralstonia_eutropha_H16 17 17
Ralstonia_pickettii_12D 14 14
Ralstonia_solanacearum_CFBP2957 8 8
Polynucleobacter_necessarius_subsp._asymbioticus_QLW-P1DMWA-1 2 2
Burkholderia_sp._RPE64 10 10
Burkholderia_sp._CCGE1002 16 15
Burkholderia_thailandensis_E264 11 11
Burkholderia_pseudomallei_1106a 9 9
Burkholderia_mallei_SAVP1 8 8
Burkholderia_ambifaria_AMMD 19 18
Burkholderia_cenocepacia_HI2424 18 18
Burkholderia_multivorans_ATCC_17616 14 14
Burkholderia_vietnamiensis_G4 17 17
Burkholderia_gladioli_BSR3 10 10
Burkholderia_glumae_BGR1 8 8
Verminephrobacter_eiseniae_EF01-2 7 7
Alicycliphilus_denitrificans_K601 11 10
Ramlibacter_tataouinensis_TTB310 8 8
Delftia_sp._Cs1-4 10 9
Delftia_acidovorans_SPH-1 9 8
Polaromonas_sp._JS666 14 14
Polaromonas_naphthalenivorans_CJ2 3 3
Variovorax_paradoxus_S110 13 13
Rhodoferax_ferrireducens_T118 6 6
Acidovorax_ebreus_TPSY 6 5
Acidovorax_sp._KKS102 7 7
Acidovorax_sp._JS42 8 7
Acidovorax_citrulli_AAC00-1 3 2
Acidovorax_avenae_subsp._avenae_ATCC_19860 5 4
Comamonas_testosteroni_CNB-2 8 7
Collimonas_fungivorans_Ter331 6 6
Janthinobacterium_sp._Marseille 6 6
Herbaspirillum_seropedicae_SmR1 7 7
Pusillimonas_sp._T7-7 6 6
Advenella_kashmirensis_WT001 15 15
Taylorella_asinigenitalis_MCE3 1 1
Taylorella_equigenitalis_MCE9 1 1
Bordetella_petrii_DSM_12804 10 10
Bordetella_avium_197N 5 5
Bordetella_pertussis_Tohama_I 5 5
Bordetella_parapertussis_12822 9 9
Bordetella_bronchiseptica_RB50 12 12
Achromobacter_xylosoxidans_A8 15 14
Achromobacter_xylosoxidans 19 18
Thiobacillus_denitrificans_ATCC_25259 2 2
Nitrosospira_multiformis_ATCC_25196 2 2
Sideroxydans_lithotrophicus_ES-1 1 1
Gallionella_capsiferriformans_ES-2 1 1
Methylotenera_mobilis_JLW8 1 1
Methylovorus_sp._MP688 1 1
Methylovorus_glucosetrophus_SIP3-4 1 1
Magnetococcus_marinus_MC-1 1 1
Parvularcula_bermudensis_HTCC2503 1 1
Asticcacaulis_excentricus_CB_48 2 2
Brevundimonas_subvibrioides_ATCC_15264 3 3
Caulobacter_sp._K31 5 5
Caulobacter_crescentus_NA1000 5 5
Caulobacter_segnis_ATCC_21756 2 2
Phenylobacterium_zucineum_HLK1 4 4
Sphingopyxis_alaskensis_RB2256 4 4
Novosphingobium_sp._PP1Y 8 8
Novosphingobium_aromaticivorans_DSM_12444 2 2
Sphingobium_sp._SYK-6 6 6
Sphingobium_japonicum_UT26S 5 5
Sphingobium_chlorophenolicum_L-1 5 5
Sphingomonas_sp._MM-1 5 5
Sphingomonas_wittichii_RW1 9 9
Zymomonas_mobilis_subsp._mobilis_NCIMB_11163 1 1
Maricaulis_maris_MCS10 3 3
Hirschia_baltica_ATCC_49814 2 2
Hyphomonas_neptunium_ATCC_15444 3 3
Dinoroseobacter_shibae_DFL_12 5 5
Phaeobacter_gallaeciensis_2.10 8 8
Pseudovibrio_sp._FO-BEG1 9 9
Jannaschia_sp._CCS1 8 8
Ruegeria_sp._TM1040 6 6
Ruegeria_pomeroyi_DSS-3 10 10
Ketogulonicigenium_vulgare_Y25 5 5
Ketogulonigenium_vulgarum_WSH-001 3 3
Roseobacter_litoralis_Och_149 8 8
Roseobacter_denitrificans_OCh_114 8 8
Rhodobacter_sphaeroides_ATCC_17029 5 5
Rhodobacter_capsulatus_SB_1003 3 3
Paracoccus_denitrificans_PD1222 15 15
Rhodospirillum_photometricum_DSM_122 1 1
Tistrella_mobilis_KA081020-065 7 7
Magnetospirillum_magneticum_AMB-1 6 5
Rhodospirillum_centenum_SW 1 1
Rhodospirillum_rubrum_F11 2 2
Azospirillum_lipoferum_4B 6 6
Azospirillum_sp._B510 9 8
Azospirillum_brasilense_Sp245 9 9
Gluconacetobacter_xylinus_NBRC_3288 3 3
Granulibacter_bethesdensis_CGDNIH1 5 5
Gluconacetobacter_diazotrophicus_PAl_5 8 8
Acidiphilium_multivorum_AIU301 4 4
Acidiphilium_cryptum_JF-5 6 6
Gluconobacter_oxydans_621H 1 1
Acetobacter_pasteurianus_IFO_3283-01 2 2
Polymorphum_gilvum_SL003B-26A1 5 5
Micavibrio_aeruginosavorus_ARL-13 4 4
Candidatus_Puniceispirillum_marinum_IMCC1322 3 3
alpha_proteobacterium_HIMB59 1 1
Candidatus_Pelagibacter_sp._IMCC9063 1 1
Candidatus_Midichloria_mitochondrii_IricVA 1 1
Starkeya_novella_DSM_506 3 3
Xanthobacter_autotrophicus_Py2 6 6
Azorhizobium_caulinodans_ORS_571 9 9
Methylobacterium_chloromethanicum_CM4 1 1
Methylobacterium_extorquens_AM1 1 1
Methylobacterium_sp._4-46 8 8
Methylobacterium_populi_BJ001 1 1
Methylobacterium_nodulans_ORS_2060 10 10
Methylobacterium_radiotolerans_JCM_2831 9 9
Parvibaculum_lavamentivorans_DS-1 7 7
Ochrobactrum_anthropi_ATCC_49188 3 3
Brucella_microti_CCM_4915 2 2
Brucella_pinnipedialis_B2/94 2 2
Brucella_canis_ATCC_23365 2 2
Brucella_suis_ATCC_23445 1 1
Brucella_melitensis_ATCC_23457 2 2
Brucella_ovis_ATCC_25840 1 1
Brucella_abortus_S19 2 2
Sinorhizobium_fredii_NGR234 7 6
Sinorhizobium_medicae_WSM419 9 9
Sinorhizobium_meliloti_AK83 11 10
Genome_sequence_of_Rhizobium_sp._strain_IRBG74 8 8
Rhizobium_etli_CIAT_652 13 13
Rhizobium_leguminosarum_bv._viciae_3841 10 10
Agrobacterium_tumefaciens_str._C58 10 10
Agrobacterium_radiobacter_K84 12 12
Agrobacterium_sp._H13-3 9 8
Agrobacterium_vitis_S4 7 7
Mesorhizobium_sp._BNC1 10 9
Mesorhizobium_opportunistum_WSM2075 11 11
Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 9 9
Mesorhizobium_loti_MAFF303099 8 8
Methylocella_silvestris_BL2 5 5
Beijerinckia_indica_subsp._indica_ATCC_9039 8 8
Pelagibacterium_halotolerans_B2 5 5
Rhodomicrobium_vannielii_ATCC_17100 5 5
Hyphomicrobium_sp._MC1 4 4
Hyphomicrobium_denitrificans_ATCC_51888 2 2
Oligotropha_carboxidovorans_OM4 6 6
Rhodopseudomonas_palustris_BisA53 4 4
Nitrobacter_winogradskyi_Nb-255 2 2
Nitrobacter_hamburgensis_X14 3 3
Bradyrhizobium_japonicum_USDA_110 26 26
Bradyrhizobium_sp._ORS_278 13 13
Methylocystis_sp._SC2 4 4
Saccharophagus_degradans_2-40 2 2
Teredinibacter_turnerae_T7901 2 2
Aggregatibacter_aphrophilus_NJ8700 1 1
Aggregatibacter_actinomycetemcomitans_D7S-1 1 1
Haemophilus_somnus_129PT 1 1
Gallibacterium_anatis_UMN179 1 1
Haemophilus_parasuis_SH0165 1 1
Haemophilus_parainfluenzae_T3T1 2 2
Haemophilus_influenzae_PittEE 1 1
Actinobacillus_succinogenes_130Z 4 4
Actinobacillus_pleuropneumoniae_serovar_5b_str._L20 3 3
Oceanimonas_sp._GK1 1 1
Tolumonas_auensis_DSM_9187 4 4
Aeromonas_veronii_B565 3 3
Aeromonas_salmonicida_subsp._salmonicida_A449 2 2
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 4 4
Vibrio_sp._Ex25 3 3
Vibrio_parahaemolyticus_RIMD_2210633 2 2
Vibrio_splendidus_LGP32 2 2
Vibrio_furnissii_NCTC_11218 4 4
Vibrio_vulnificus_MO6-24/O 2 2
Photobacterium_profundum_SS9 4 4
Psychromonas_ingrahamii_37 1 1
Psychromonas_sp._CNPT3 1 1
Idiomarina_loihiensis_L2TR 3 3
Ferrimonas_balearica_DSM_9799 1 1
Shewanella_loihica_PV-4 3 3
Shewanella_halifaxensis_HAW-EB4 2 2
Shewanella_sediminis_HAW-EB3 1 1
Shewanella_pealeana_ATCC_700345 2 2
Shewanella_oneidensis_MR-1 1 1
Shewanella_baltica_OS185 2 2
Shewanella_woodyi_ATCC_51908 5 5
Shewanella_sp._MR-4 4 4
Shewanella_amazonensis_SB2B 2 2
Shewanella_violacea_DSS12 1 1
Shewanella_frigidimarina_NCIMB_400 3 3
Shewanella_putrefaciens_CN-32 1 1
Colwellia_psychrerythraea_34H 6 6
Pseudoalteromonas_sp._SM9913 1 1
Pseudoalteromonas_atlantica_T6c 5 5
Pseudoalteromonas_haloplanktis_TAC125 1 1
Glaciecola_sp._4H-3-7+YE-5 4 4
Glaciecola_nitratireducens_FR1064 1 1
Marinobacter_adhaerens_HP15 5 5
Marinobacter_sp._BSs20148 4 4
Marinobacter_hydrocarbonoclasticus_ATCC_49840 3 3
Marinobacter_aquaeolei_VT8 2 2
Alteromonas_sp._SN2 2 2
Alteromonas_macleodii_str._'Deep_ecotype' 2 2
Kangiella_koreensis_DSM_16069 2 2
Hahella_chejuensis_KCTC_2396 1 1
Alcanivorax_borkumensis_SK2 1 1
Marinomonas_posidonica_IVIA-Po-181 2 1
Marinomonas_sp._MWYL1 4 4
Marinomonas_mediterranea_MMB-1 5 5
Chromohalobacter_salexigens_DSM_3043 1 1
Halomonas_elongata_DSM_2581 3 3
Methylomicrobium_alcaliphilum 1 1
Methylomonas_methanica_MC09 2 2
Methylococcus_capsulatus_str._Bath 1 1
Dichelobacter_nodosus_VCS1703A 1 1
Rhodanobacter_denitrificans 8 8
Frateuria_aurantia_DSM_6220 3 3
Pseudoxanthomonas_spadix_BD-a59 3 3
Pseudoxanthomonas_suwonensis_11-1 3 3
Stenotrophomonas_maltophilia_K279a 6 6
Xanthomonas_axonopodis_pv._citri_str._306 2 2
Xanthomonas_albilineans_GPE_PC73 2 2
Xanthomonas_oryzae_pv._oryzae_PXO99A 2 2
Xanthomonas_campestris_pv._campestris_str._B100 2 2
Halothiobacillus_neapolitanus_c2 2 2
Spiribacter_sp._UAH-SP71 1 1
Alkalilimnicola_ehrlichii_MLHE-1 2 2
Thioalkalivibrio_sulfidophilus_HL-EbGr7 1 1
Halorhodospira_halophila_SL1 2 2
Thiocystis_violascens_DSM_198 1 1
Nitrosococcus_halophilus_Nc4 1 1
Coxiella_burnetii_Dugway_5J108-111 1 1
Legionella_longbeachae_NSW150 5 5
Legionella_pneumophila_str._Corby 3 3
gamma_proteobacterium_HdN1 2 2
Photorhabdus_asymbiotica 2 2
Photorhabdus_luminescens_subsp._laumondii_TTO1 1 1
Xenorhabdus_bovienii_SS-2004 2 2
Xenorhabdus_nematophila_ATCC_19061 1 1
Providencia_stuartii_MRSN_2154 2 1
Proteus_mirabilis_HI4320 2 2
Edwardsiella_ictaluri_93-146 2 2
Edwardsiella_tarda_EIB202 2 2
Rahnella_sp._Y9602 7 5
Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 8 6
Yersinia_pseudotuberculosis_IP_31758 4 3
Yersinia_pestis_Pestoides_F 4 3
Yersinia_enterocolitica_subsp._enterocolitica_8081 4 3
Serratia_sp._AS12 10 8
Serratia_sp._ATCC_39006 3 3
Serratia_plymuthica_AS9 10 8
Serratia_proteamaculans_568 7 5
Dickeya_dadantii_Ech703 2 1
Dickeya_zeae_Ech1591 2 1
Pectobacterium_wasabiae_WPP163 3 2
Pectobacterium_sp._SCC3193 4 3
Pectobacterium_atrosepticum_SCRI1043 4 3
Pectobacterium_carotovorum_subsp._carotovorum_PC1 4 3
Pantoea_sp._At-9b 16 14
Pantoea_vagans_C9-1 10 8
Pantoea_ananatis_LMG_20103 5 4
Erwinia_tasmaniensis_Et1/99 4 3
Erwinia_sp._Ejp617 3 2
Erwinia_billingiae_Eb661 10 8
Erwinia_pyrifoliae_Ep1/96 3 2
Erwinia_amylovora_ATCC_49946 3 2
Escherichia_blattae_DSM_4481 3 2
Cronobacter_turicensis_z3032 7 5
Cronobacter_sakazakii_ES15 7 5
Enterobacteriaceae_bacterium_strain_FGI_57 6 5
Shigella_sonnei_Ss046 1 1
Shigella_flexneri_5_str._8401 3 2
Shigella_dysenteriae_Sd197 4 3
Shigella_boydii_CDC_3083-94 3 2
Salmonella_bongori_NCTC_12419 3 2
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_C_strain_RKS4594 3 2
Klebsiella_oxytoca_E718 10 8
Klebsiella_variicola_At-22 14 12
Klebsiella_pneumoniae_NTUH-K2044 12 10
Enterobacter_aerogenes_KCTC_2190 11 9
Escherichia_fergusonii_ATCC_35469 6 5
Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 3 2
Enterobacter_sp._R4-368 7 5
Enterobacter_sp._638 4 3
Enterobacter_asburiae_LF7a 7 5
Enterobacter_cloacae_subsp._dissolvens_SDM 8 6
Citrobacter_rodentium_ICC168 4 3
Citrobacter_koseri_ATCC_BAA-895 5 4
Azotobacter_vinelandii_DJ 5 5
Pseudomonas_sp._TKP 7 7
Pseudomonas_sp._UW4 7 7
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 8 8
Pseudomonas_entomophila_L48 6 6
Pseudomonas_syringae_pv._tomato_str._DC3000 6 6
Pseudomonas_stutzeri_A1501 5 5
Pseudomonas_fulva_12-X 5 5
Pseudomonas_putida_F1 6 6
Pseudomonas_protegens_Pf-5 4 4
Pseudomonas_fluorescens_SBW25 4 4
Pseudomonas_mendocina_ymp 3 3
Pseudomonas_aeruginosa_UCBPP-PA14 5 5
Pseudomonas_sp._VLB120 7 7
Psychrobacter_sp._G 2 2
Psychrobacter_sp._PRwf-1 1 1
Psychrobacter_arcticus_273-4 3 3
Psychrobacter_cryohalolentis_K5 2 2
Moraxella_catarrhalis_RH4 2 2
Acinetobacter_oleivorans_DR1 4 4
Acinetobacter_calcoaceticus_PHEA-2 3 3
Acinetobacter_baumannii_ATCC_17978 3 3
Acinetobacter_sp._ADP1 3 3
Cycloclasticus_sp._P1 1 1
Francisella_sp._TX077308 1 1
Francisella_philomiragia_subsp._philomiragia_ATCC_25017 1 1
Fervidicoccus_fontis_Kam940 1 1
Thermogladius_cellulolyticus_1633 1 1
Staphylothermus_hellenicus_DSM_12710 1 1
Staphylothermus_marinus_F1 1 1
Desulfurococcus_fermentans_DSM_16532 1 1
Desulfurococcus_kamchatkensis_1221n 1 1
Desulfurococcus_mucosus_DSM_2162 1 1
Sulfolobus_islandicus_Y.N.15.51 1 1
Sulfolobus_solfataricus_P2 1 1
Sulfolobus_acidocaldarius_DSM_639 1 1
Caldivirga_maquilingensis_IC-167 1 1
halophilic_archaeon_DL31 1 1
Methanocella_arvoryzae_MRE50 3 3
Methanocella_conradii_HZ254 2 2
Methanocella_paludicola_SANAE 2 2
Methanosaeta_harundinacea_6Ac 3 3
Methanosaeta_thermophila_PT 3 3
Methanosaeta_concilii_GP6 5 5
Methanosalsum_zhilinae_DSM_4017 5 5
Methanohalobium_evestigatum_Z-7303 5 5
Methanococcoides_burtonii_DSM_6242 7 7
Methanosarcina_acetivorans_C2A 12 12
Methanosarcina_mazei_Go1 11 11
Methanosarcina_barkeri_str._Fusaro 12 12
Methanohalophilus_mahii_DSM_5219 7 7
Methanosphaerula_palustris_E1-9c 4 4
Methanoregula_boonei_6A8 4 4
Methanospirillum_hungatei_JF-1 3 3
Methanocorpusculum_labreanum_Z 2 2
Methanoplanus_petrolearius_DSM_11571 5 5
Methanoculleus_bourgensis_MS2 2 2
Methanoculleus_marisnigri_JR1 3 3
Methanopyrus_kandleri_AV19 1 1
Ferroglobus_placidus_DSM_10642 2 2
Archaeoglobus_fulgidus_DSM_4304 2 2
Thermococcus_sp._4557 1 1
Thermococcus_onnurineus_NA1 1 1
Thermococcus_kodakarensis_KOD1 1 1
Thermoplasmatales_archaeon_BRNA1 1 1
Thermoplasma_volcanium_GSS1 1 1
Thermoplasma_acidophilum_DSM_1728 1 1
Picrophilus_torridus_DSM_9790 1 1
Halopiger_xanaduensis_SH-6 2 2
Haloterrigena_turkmenica_DSM_5511 2 2
Natrinema_sp._J7-2 2 2
Natrialba_magadii_ATCC_43099 3 3
Halorubrum_lacusprofundi_ATCC_49239 1 1
Halogeometricum_borinquense_DSM_11551 4 4
Haloferax_mediterranei_ATCC_33500 5 5
Haloferax_volcanii_DS2 2 2
Halomicrobium_mukohataei_DSM_12286 1 1
Halorhabdus_utahensis_DSM_12940 2 2
Natronomonas_pharaonis_DSM_2160 1 1
Haloarcula_hispanica_ATCC_33960 1 1
Haloarcula_marismortui_ATCC_43049 1 1
Halalkalicoccus_jeotgali_B3 1 1
Methanotorris_igneus_Kol_5 1 1
Methanocaldococcus_sp._FS406-22 2 2
Methanocaldococcus_fervens_AG86 1 1
Methanocaldococcus_vulcanius_M7 1 1
methanocaldococcus_infernus_ME 1 1
Methanocaldococcus_jannaschii_DSM_2661 2 2
Methanothermococcus_okinawensis_IH1 1 1
Methanococcus_aeolicus_Nankai-3 1 1
Methanococcus_maripaludis_C5 2 2
Methanococcus_voltae_A3 2 2
Methanococcus_vannielii_SB 1 1
Methanothermus_fervidus_DSM_2088 1 1
Methanothermobacter_marburgensis_str._Marburg 3 3
Methanothermobacter_thermautotrophicus_str._Delta_H 4 4
Methanobrevibacter_sp._AbM4 2 2
Methanobrevibacter_ruminantium_M1 2 2
Methanobrevibacter_smithii_ATCC_35061 1 1
Complete_genome_sequence_of_Methanobacterium_sp._Mb1 6 6
Aciduliprofundum_sp._MAR08-339 1 1
Aciduliprofundum_boonei_T469 1 1

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   8 8
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   3 3
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   2 2
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   1 1
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   1 1
Cryptococcus_neoformans_var._grubii_H99_ 2 2
Cryptococcus_neoformans_B-3501A_ 1 1
Cryptococcus_neoformans_JEC21_ 1 1
Paracoccidioides_brasiliensis_Pb01_ 4 4
Paracoccidioides_brasiliensis_Pb03_ 3 3
Coccidioides_posadasii_str._Silveira_ 4 4
Coccidioides_immitis_RMSCC_3703_ 4 4
Coccidioides_immitis_RMSCC_2394_ 4 4
Coccidioides_immitis_H538.4_ 3 3
Ajellomyces_dermatitidis_ER-3_ 3 3
Histoplasma_capsulatum_H143 4 4
Histoplasma_capsulatum_H88 3 3
Histoplasma_capsulatum_G186AR 3 3
Aspergillus_fumigatus_A1163_ 6 6
Candida_albicans_WO-1_ 2 2
Saccharomyces_cerevisiae_UC5 1 1
Saccharomyces_cerevisiae_PW5 1 1
Saccharomyces_cerevisiae_T7 1 1
Saccharomyces_cerevisiae_FostersB 1 1
Saccharomyces_cerevisiae_VL3 1 1
Saccharomyces_cerevisiae_Vin13 1 1
Saccharomyces_cerevisiae_LalvinQA23 1 1
Saccharomyces_cerevisiae_AWRI796 1 1
Saccharomyces_cerevisiae_Sigma1278b 1 1
Saccharomyces_cerevisiae_W303 1 1
Saccharomyces_cerevisiae_JAY291 1 1
Saccharomyces_cerevisiae_AWRI1631 1 1
Saccharomyces_cerevisiae_YJM789_ 1 1
Saccharomyces_cerevisiae_YJM789 1 1
Saccharomyces_cerevisiae_RM11-1a 1 1
Saccharomyces_cerevisiae_RM11-1a_ 1 1
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   1 1
Schizosaccharomyces_pombe_972h-_ 1 1
Batrachochytrium_dendrobatidis_JAM81_ 3 2
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   2 2
Trypanosoma_brucei_Lister_427_v4.1 1 1
Chroococcidiopsis_thermalis_PCC_7203 1 1
Synechocystis_sp._PCC_6803_substr._PCC-P 1 1
Synechocystis_sp._PCC_6803_substr._PCC-N 1 1
Synechocystis_sp._PCC_6803_substr._GT-I 1 1
Synechocystis_sp._PCC_6803 1 1
Synechococcus_sp._JA-2-3B'a(2-13) 1 1
Synechococcus_sp._JA-3-3Ab 1 1
Synechococcus_sp._CC9605 1 1
Crinalium_epipsammum_PCC_9333 3 3
Oscillatoria_nigro-viridis_PCC_7112 2 2
Cyanothece_sp._PCC_7822 2 2
Cyanothece_sp._PCC_7425 1 1
Cyanothece_sp._PCC_7424 1 1
Cyanobacterium_aponinum_PCC_10605 1 1
Cyanobacterium_stanieri_PCC_7202 1 1
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 3 3
Cylindrospermum_stagnale_PCC_7417 1 1
Anabaena_cylindrica_PCC_7122 2 2
Gordonibacter_pamelaeae_7-10-1-b 1 1
Adlercreutzia_equolifaciens_DSM_19450 1 1
Frankia_sp._EuI1c 17 16
Frankia_sp._CcI3 3 3
Nocardiopsis_alba_ATCC_BAA-2165 6 6
Streptomyces_albus_J1074 4 4
Streptomyces_rapamycinicus_NRRL_5491 18 18
Streptomyces_davawensis_JCM_4913 13 13
Streptomyces_fulvissimus_DSM_40593 7 7
Streptomyces_venezuelae_ATCC_10712 9 9
Streptomyces_collinus_Tu_365 11 11
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 11 11
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 11 11
Saccharothrix_espanaensis_DSM_44229 9 9
Amycolatopsis_mediterranei_RB 23 23
Amycolatopsis_mediterranei_S699 23 23
Amycolatopsis_mediterranei_S699 23 23
Amycolatopsis_orientalis_HCCB10007 16 16
Actinoplanes_friuliensis_DSM_7358 10 10
Rhodococcus_pyridinivorans_SB3094 10 9
Rhodococcus_erythropolis_CCM2595 11 11
Nocardia_brasiliensis_ATCC_700358 17 17
Mycobacterium_sp._MOTT36Y 19 19
Mycobacterium_sp._JDM601 14 13
Mycobacterium_abscessus_subsp._bolletii_50594 9 9
Mycobacterium_liflandii_128FXT 11 11
Mycobacterium_sp._KMS 16 16
Mycobacterium_sp._MCS 16 16
Mycobacterium_yongonense_05-1390 18 18
Mycobacterium_intracellulare_MOTT-64 19 19
Mycobacterium_indicus_pranii_MTCC_9506 19 19
Mycobacterium_intracellulare_MOTT-02 18 18
Mycobacterium_avium_subsp._paratuberculosis_MAP4 15 15
Mycobacterium_avium_subsp._paratuberculosis_K-10 15 15
Mycobacterium_canettii_CIPT_140070017 8 7
Mycobacterium_canettii_CIPT_140060008 9 8
Mycobacterium_canettii_CIPT_140070008 8 7
Mycobacterium_canettii_CIPT_140070010 8 7
Mycobacterium_tuberculosis_EAI5/NITR206 9 8
Mycobacterium_tuberculosis_EAI5 9 8
Mycobacterium_tuberculosis_CAS/NITR204 8 8
Mycobacterium_tuberculosis_str._Beijing/NITR203 9 8
Mycobacterium_tuberculosis_UT205 8 7
Mycobacterium_tuberculosis_RGTB423 8 7
Mycobacterium_tuberculosis_RGTB327 8 7
Mycobacterium_tuberculosis_CTRI-2 8 7
Mycobacterium_tuberculosis_str._Erdman_=_ATCC_35801 9 8
Mycobacterium_tuberculosis_KZN_605 8 7
Mycobacterium_tuberculosis_KZN_4207 8 7
Mycobacterium_tuberculosis_CCDC5180 9 8
Mycobacterium_tuberculosis_CCDC5079 9 8
Mycobacterium_tuberculosis_CCDC5079 9 8
Mycobacterium_tuberculosis_H37Ra 9 8
Mycobacterium_tuberculosis_str._Haarlem/NITR202 8 7
Mycobacterium_tuberculosis_str._Haarlem 9 8
Mycobacterium_tuberculosis_F11 9 8
Mycobacterium_tuberculosis_H37Rv 9 8
Mycobacterium_tuberculosis_CDC1551 9 8
Mycobacterium_bovis_AF2122/97 9 8
Mycobacterium_bovis_BCG_str._Korea_1168P 8 7
Mycobacterium_bovis_BCG_str._Mexico 9 8
Mycobacterium_bovis_BCG_str._Tokyo_172 9 8
Mycobacterium_gilvum_Spyr1 13 13
Mycobacterium_smegmatis_str._MC2_155 16 16
Mycobacterium_leprae_TN 1 1
Mycobacterium_kansasii_ATCC_12478 18 18
Corynebacterium_maris_DSM_45190 7 6
Corynebacterium_halotolerans_YIM_70093_=_DSM_44683 6 5
Corynebacterium_terpenotabidum_Y-11 2 2
Corynebacterium_ulcerans_BR-AD22 1 1
Corynebacterium_ulcerans_809 1 1
Corynebacterium_urealyticum_DSM_7111 3 3
Corynebacterium_argentoratense_DSM_44202 1 1
Corynebacterium_callunae_DSM_20147 4 3
Corynebacterium_pseudotuberculosis_258 1 1
Corynebacterium_pseudotuberculosis_Cp162 1 1
Corynebacterium_pseudotuberculosis_P54B96 1 1
Corynebacterium_pseudotuberculosis_267 1 1
Corynebacterium_pseudotuberculosis_1/06-A 1 1
Corynebacterium_pseudotuberculosis_42/02-A 1 1
Corynebacterium_pseudotuberculosis_3/99-5 1 1
Corynebacterium_pseudotuberculosis_31 1 1
Corynebacterium_pseudotuberculosis_CIP_52.97 1 1
Corynebacterium_pseudotuberculosis_PAT10 1 1
Corynebacterium_pseudotuberculosis_I19 1 1
Corynebacterium_pseudotuberculosis_FRC41 1 1
Corynebacterium_pseudotuberculosis_C231 1 1
Corynebacterium_pseudotuberculosis_1002 1 1
Corynebacterium_glutamicum_MB001 6 5
Corynebacterium_glutamicum_SCgG2 5 4
Corynebacterium_glutamicum_SCgG1 5 4
Corynebacterium_glutamicum_ATCC_13032 6 5
Corynebacterium_glutamicum_ATCC_13032 6 5
Corynebacterium_glutamicum_ATCC_13032 6 5
Corynebacterium_diphtheriae_BH8 3 3
Corynebacterium_diphtheriae_INCA_402 1 1
Corynebacterium_diphtheriae_VA01 1 1
Corynebacterium_diphtheriae_HC04 2 2
Corynebacterium_diphtheriae_HC03 2 2
Corynebacterium_diphtheriae_HC02 1 1
Corynebacterium_diphtheriae_HC01 1 1
Corynebacterium_diphtheriae_241 1 1
Corynebacterium_diphtheriae_CDCE_8392 1 1
Corynebacterium_diphtheriae_PW8 1 1
Corynebacterium_diphtheriae_C7_(beta) 2 2
Corynebacterium_diphtheriae_31A 2 2
Clavibacter_michiganensis_subsp._sepedonicus 2 2
Bifidobacterium_longum_subsp._infantis_157F 2 2
Bifidobacterium_longum_subsp._longum_BBMN68 2 2
Bifidobacterium_thermophilum_RBL67 2 2
Bifidobacterium_animalis_subsp._animalis_ATCC_25527 2 2
Bifidobacterium_animalis_subsp._lactis_Bl12 2 2
Bifidobacterium_animalis_subsp._lactis_B420 2 2
Bifidobacterium_animalis_subsp._lactis_ATCC_27673 2 2
Bifidobacterium_animalis_subsp._lactis_BLC1 2 2
Bifidobacterium_animalis_subsp._lactis_CNCM_I-2494 2 2
Bifidobacterium_animalis_subsp._lactis_Bi-07 2 2
Bifidobacterium_animalis_subsp._lactis_V9 2 2
Bifidobacterium_animalis_subsp._lactis_DSM_10140 2 2
Bifidobacterium_animalis_subsp._lactis_BB-12 2 2
Bifidobacterium_animalis_subsp._lactis_AD011 2 2
Bifidobacterium_asteroides_PRL2011 3 3
Bifidobacterium_bifidum_PRL2010 1 1
Bifidobacterium_bifidum_BGN4 1 1
Actinomyces_viscosus_C505 3 3
Dehalococcoides_mccartyi_GY50 1 1
Dehalococcoides_mccartyi_DCMB5 1 1
Dehalococcoides_mccartyi_BTF08 1 1
Dehalococcoides_sp._GT 1 1
Dehalococcoides_sp._VS 1 1
Dehalococcoides_sp._CBDB1 1 1
Deinococcus_peraridilitoris_DSM_19664 6 6
Thermus_oshimai_JL-2 3 3
Thermus_thermophilus_JL-18 3 3
Thermus_thermophilus_SG0.5JP17-16 3 3
Thermus_thermophilus_HB8 2 2
[Eubacterium]_cylindroides_[Eubacterium]_cylindroides_T2-87 3 3
Erysipelothrix_rhusiopathiae_SY1027 1 1
Eubacterium_siraeum_V10Sc8a 1 1
Ruminococcus_champanellensis_18P13 1 1
Sulfobacillus_acidophilus_TPY 4 4
Clostridium_acidurici_9a 1 1
Desulfosporosinus_meridiei_DSM_13257 2 2
Desulfitobacterium_dichloroeliminans_LMG_P-21439 2 2
Desulfitobacterium_hafniense_DCB-2 5 5
Desulfotomaculum_gibsoniae_DSM_7213 3 3
Clostridium_difficile_BI1 1 1
Clostridium_difficile_R20291 1 1
Clostridium_difficile_CD196 1 1
Clostridium_saccharolyticum_Clostridium_cf._saccharolyticum_K10 1 1
Coprococcus_catus_GD/7 2 2
Clostridium_saccharobutylicum_DSM_13864 1 1
Clostridium_autoethanogenum_DSM_10061 4 3
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 2 2
Clostridium_kluyveri_NBRC_12016 1 1
Clostridium_pasteurianum_BC1 3 3
Clostridium_botulinum_H04402_065 3 3
Clostridium_botulinum_F_str._230613 3 3
Clostridium_botulinum_F_str._Langeland 3 3
Clostridium_botulinum_E3_str._Alaska_E43 1 1
Clostridium_botulinum_B1_str._Okra 3 3
Clostridium_botulinum_Ba4_str._657 3 3
Clostridium_botulinum_A2_str._Kyoto 2 2
Clostridium_botulinum_A3_str._Loch_Maree 4 4
Clostridium_botulinum_A_str._Hall 2 2
Clostridium_botulinum_A_str._ATCC_19397 2 2
Clostridium_acetobutylicum_DSM_1731 1 1
Clostridium_acetobutylicum_EA_2018 1 1
Thermoanaerobacterium_saccharolyticum_JW/SL-YS485 4 4
Thermoanaerobacterium_thermosaccharolyticum_M0795 2 2
Thermacetogenium_phaeum_DSM_12270 3 3
Thermoanaerobacter_sp._X513 1 1
Halobacteroides_halobius_DSM_5150 2 2
Carnobacterium_maltaromaticum_LMA28 2 2
Melissococcus_plutonius_ATCC_35311 1 1
Enterococcus_casseliflavus_EC20 1 1
Enterococcus_faecium_Aus0085 1 1
Enterococcus_faecium_NRRL_B-2354 1 1
Enterococcus_faecium_DO 1 1
Lactobacillus_paracasei_subsp._paracasei_8700:2 1 1
Lactobacillus_casei_LOCK919 1 1
Lactobacillus_casei_W56 1 1
Lactobacillus_casei_LC2W 1 1
Lactobacillus_casei_BD-II 1 1
Lactobacillus_casei_BL23 1 1
Lactobacillus_casei_str._Zhang 1 1
Lactobacillus_rhamnosus_LOCK908 2 2
Lactobacillus_rhamnosus_LOCK900 2 2
Lactobacillus_rhamnosus_ATCC_8530 2 2
Lactobacillus_rhamnosus_GG 2 2
Lactobacillus_rhamnosus_GG 2 2
Lactobacillus_johnsonii_DPC_6026 1 1
Lactobacillus_johnsonii_NCC_533 2 2
Lactobacillus_fermentum_F-6 2 2
Lactobacillus_amylovorus_GRL_1112 1 1
Lactobacillus_reuteri_TD1 1 1
Lactobacillus_reuteri_I5007 1 1
Lactobacillus_reuteri_JCM_1112 1 1
Lactobacillus_plantarum_16 2 2
Lactobacillus_plantarum_ZJ316 2 2
Lactobacillus_plantarum_subsp._plantarum_ST-III 2 2
Lactobacillus_plantarum_subsp._plantarum_P-8 1 1
Lactobacillus_plantarum_WCFS1 1 1
Lactobacillus_helveticus_R0052 1 1
Lactobacillus_helveticus_H10 1 1
Lactobacillus_helveticus_CNRZ32 1 1
Lactobacillus_delbrueckii_subsp._bulgaricus_ND02 1 1
Lactobacillus_brevis_KB290 1 1
Lactobacillus_acidophilus_La-14 1 1
Lactobacillus_acidophilus_NCFM 1 1
Lactococcus_lactis_subsp._lactis_KLDS_4.0325 2 2
Lactococcus_lactis_subsp._lactis_IO-1 2 2
Lactococcus_lactis_subsp._lactis_CV56 2 2
Lactococcus_lactis_subsp._lactis_KF147 2 2
Lactococcus_lactis_subsp._lactis_Il1403 2 2
Lactococcus_lactis_subsp._cremoris_KW2 2 2
Lactococcus_lactis_subsp._cremoris_UC509.9 2 2
Lactococcus_lactis_subsp._cremoris_A76 2 2
Lactococcus_lactis_subsp._cremoris_NZ9000 2 2
Lactococcus_lactis_subsp._cremoris_SK11 2 2
Streptococcus_anginosus_C238 1 1
Streptococcus_anginosus_C1051 1 1
Streptococcus_gallolyticus_subsp._gallolyticus_ATCC_BAA-2069 3 3
Streptococcus_gallolyticus_subsp._gallolyticus_ATCC_43143 3 3
Streptococcus_lutetiensis_033 1 1
Streptococcus_oligofermentans_AS_1.3089 1 1
Streptococcus_pneumoniae_A026 1 1
Streptococcus_pneumoniae_ST556 1 1
Streptococcus_pneumoniae_SPNA45 1 1
Streptococcus_pneumoniae_SPN994039 1 1
Streptococcus_pneumoniae_SPN994038 1 1
Streptococcus_pneumoniae_SPN034183 1 1
Streptococcus_pneumoniae_SPN034156 1 1
Streptococcus_pneumoniae_INV104 1 1
Streptococcus_pneumoniae_INV200 1 1
Streptococcus_pneumoniae_OXC141 1 1
Streptococcus_pneumoniae_gamPNI0373 1 1
Streptococcus_pneumoniae_AP200 1 1
Streptococcus_pneumoniae_ATCC_700669 1 1
Streptococcus_pneumoniae_TCH8431/19A 1 1
Streptococcus_pneumoniae_CGSP14 1 1
Streptococcus_pneumoniae_G54 1 1
Streptococcus_pneumoniae_JJA 1 1
Streptococcus_pneumoniae_70585 1 1
Streptococcus_pneumoniae_Hungary19A-6 1 1
Streptococcus_pneumoniae_Taiwan19F-14 1 1
Streptococcus_pneumoniae_D39 1 1
Streptococcus_pneumoniae_670-6B 1 1
Streptococcus_pneumoniae_R6 1 1
Streptococcus_pneumoniae_TIGR4 1 1
Streptococcus_agalactiae_ILRI112 1 1
Streptococcus_agalactiae_09mas018883 1 1
Streptococcus_agalactiae_2-22 1 1
Streptococcus_agalactiae_SA20-06 1 1
Streptococcus_agalactiae_GD201008-001 1 1
Streptococcus_agalactiae_NEM316 1 1
Streptococcus_agalactiae_2603V/R 1 1
Streptococcus_mutans_GS-5 2 2
Streptococcus_mutans_LJ23 2 2
Streptococcus_mutans_UA159 2 2
Streptococcus_thermophilus_MN-ZLW-002 1 1
Streptococcus_thermophilus_JIM_8232 2 2
Streptococcus_thermophilus_ND03 1 1
Streptococcus_thermophilus_CNRZ1066 1 1
Streptococcus_thermophilus_LMG_18311 1 1
Streptococcus_suis_TL13 1 1
Streptococcus_suis_ST3 1 1
Streptococcus_suis_D12 1 1
Streptococcus_salivarius_CCHSS3 1 1
Streptococcus_salivarius_JIM8777 1 1
Exiguobacterium_antarcticum_B7 1 1
Thermobacillus_composti_KWC4 1 1
Paenibacillus_sp._Y412MC10 2 2
Paenibacillus_mucilaginosus_KNP414 5 5
Paenibacillus_mucilaginosus_K02 5 5
Paenibacillus_larvae_subsp._larvae_DSM_25430 1 1
Paenibacillus_polymyxa_CR1 6 5
Paenibacillus_polymyxa_SC2 3 3
Paenibacillus_polymyxa_E681 3 3
Listeria_monocytogenes_EGD_sequence 1 1
Listeria_monocytogenes_serotype_4b_str._LL195 1 1
Listeria_monocytogenes_07PF0776 1 1
Listeria_monocytogenes_M7 1 1
Listeria_monocytogenes_J1-220 1 1
Listeria_monocytogenes_J1816 1 1
Listeria_monocytogenes_SLCC2376 1 1
Listeria_monocytogenes_SLCC5850 1 1
Listeria_monocytogenes_ATCC_19117 1 1
Listeria_monocytogenes_L312 1 1
Listeria_monocytogenes_SLCC2479 1 1
Listeria_monocytogenes_SLCC7179 1 1
Listeria_monocytogenes_SLCC2540 1 1
Listeria_monocytogenes_SLCC2378 1 1
Listeria_monocytogenes_serotype_1/2b_str._SLCC2755 1 1
Listeria_monocytogenes_serotype_1/2c_str._SLCC2372 1 1
Listeria_monocytogenes_serotype_7_str._SLCC2482 1 1
Listeria_monocytogenes_08-5578 1 1
Listeria_monocytogenes_08-5923 1 1
Listeria_monocytogenes_L99 1 1
Listeria_monocytogenes_HCC23 1 1
Listeria_monocytogenes_10403S 1 1
Listeria_monocytogenes_J0161 1 1
Listeria_monocytogenes_Finland_1998 1 1
Listeria_monocytogenes_FSL_R2-561 1 1
Listeria_monocytogenes_serotype_4b_str._F2365 1 1
Listeria_monocytogenes_EGD-e 1 1
Geobacillus_sp._C56-T3 2 2
Geobacillus_sp._Y412MC52 1 1
Geobacillus_sp._Y412MC61 1 1
Amphibacillus_xylanus_NBRC_15112 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_sequencing 3 2
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5033 3 3
Bacillus_amyloliquefaciens_subsp._plantarum_AS43.3 3 3
Bacillus_amyloliquefaciens_subsp._plantarum_YAU_B9601-Y2 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5113 2 2
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5036 3 3
Bacillus_amyloliquefaciens_subsp._plantarum_CAU_B946 3 3
Bacillus_amyloliquefaciens_LFB112 3 3
Bacillus_amyloliquefaciens_CC178 2 2
Bacillus_amyloliquefaciens_Y2 1 1
Bacillus_amyloliquefaciens_IT-45 3 3
Bacillus_amyloliquefaciens_XH7 1 1
Bacillus_amyloliquefaciens_LL3 1 1
Bacillus_amyloliquefaciens_TA208 1 1
Bacillus_amyloliquefaciens_DSM_7 1 1
Bacillus_licheniformis_9945A 3 3
Bacillus_subtilis_PY79 3 3
Bacillus_subtilis_XF-1 3 3
Bacillus_subtilis_QB928 2 2
Bacillus_subtilis_BSn5 4 4
Bacillus_subtilis_subsp._subtilis_str._BAB-1 3 3
Bacillus_subtilis_subsp._subtilis_str._BSP1 3 3
Bacillus_subtilis_subsp._subtilis_str._RO-NN-1 3 3
Bacillus_subtilis_subsp._subtilis_6051-HGW 3 3
Bacillus_subtilis_subsp._spizizenii_TU-B-10 3 3
Bacillus_subtilis_subsp._spizizenii_str._W23 3 3
Bacillus_subtilis_subsp._natto_BEST195 3 3
Bacillus_licheniformis_DSM_13_=_ATCC_14580 3 3
Bacillus_infantis_NRRL_B-14911 2 2
Bacillus_cereus_subsp._cytotoxis_NVH_391-98 2 2
Bacillus_toyonensis_BCT-7112 3 3
Bacillus_thuringiensis_HD-771 3 3
Bacillus_thuringiensis_HD-789 4 4
Bacillus_thuringiensis_MC28 2 2
Bacillus_thuringiensis_serovar_chinensis_CT-43 3 3
Bacillus_thuringiensis_YBT-1518 3 3
Bacillus_thuringiensis_Bt407 3 3
Bacillus_thuringiensis_serovar_konkukian_str._97-27 2 2
Bacillus_thuringiensis_serovar_kurstaki_str._HD73 3 3
Bacillus_thuringiensis_BMB171 3 3
Bacillus_thuringiensis_serovar_finitimus_YBT-020 3 3
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 3 3
Bacillus_cereus_FRI-35 6 6
Bacillus_cereus_biovar_anthracis_str._CI 3 3
Bacillus_cereus_AH820 4 4
Bacillus_cereus_AH187 3 3
Bacillus_cereus_B4264 2 2
Bacillus_cereus_G9842 2 2
Bacillus_cereus_Q1 5 5
Bacillus_cereus_F837/76 4 4
Bacillus_cereus_NC7401 3 3
Bacillus_cereus_E33L 3 3
Bacillus_cereus_ATCC_14579 2 2
Bacillus_cereus_ATCC_10987 4 4
Bacillus_anthracis_str._H9401 3 3
Bacillus_anthracis_str._CDC_684 3 3
Bacillus_anthracis_str._'Ames_Ancestor' 3 3
Bacillus_anthracis_str._Sterne 3 3
Bacillus_anthracis_str._Ames 3 3
Bacillus_megaterium_WSH-002 4 4
Bacillus_megaterium_QM_B1551 5 5
Bacillus_coagulans_36D1 3 2
Staphylococcus_aureus_subsp._aureus_MSHR1132 1 1
Staphylococcus_pasteuri_SP1 2 2
Staphylococcus_lugdunensis_N920143 1 1
Staphylococcus_epidermidis_ATCC_12228 1 1
Staphylococcus_aureus_CA-347 1 1
Staphylococcus_aureus_Bmb9393 1 1
Staphylococcus_aureus_M1 1 1
Staphylococcus_aureus_08BA02176 1 1
Staphylococcus_aureus_ST228/18412 1 1
Staphylococcus_aureus_ST228/18341 1 1
Staphylococcus_aureus_ST228/16125 1 1
Staphylococcus_aureus_ST228/16035 1 1
Staphylococcus_aureus_ST228/15532 1 1
Staphylococcus_aureus_ST228/10497 1 1
Staphylococcus_aureus_ST228/10388 1 1
Staphylococcus_aureus_04-02981 1 1
Staphylococcus_aureus_RF122 1 1
Staphylococcus_aureus_subsp._aureus_Z172 1 1
Staphylococcus_aureus_subsp._aureus_6850 1 1
Staphylococcus_aureus_subsp._aureus_SA957 2 2
Staphylococcus_aureus_subsp._aureus_CN1 1 1
Staphylococcus_aureus_subsp._aureus_SA40 2 2
Staphylococcus_aureus_subsp._aureus_11819-97 1 1
Staphylococcus_aureus_subsp._aureus_M013 2 2
Staphylococcus_aureus_subsp._aureus_HO_5096_0412 1 1
Staphylococcus_aureus_subsp._aureus_VC40 1 1
Staphylococcus_aureus_subsp._aureus_T0131 1 1
Staphylococcus_aureus_subsp._aureus_LGA251 1 1
Staphylococcus_aureus_subsp._aureus_ECT-R_2 1 1
Staphylococcus_aureus_subsp._aureus_JKD6159 1 1
Staphylococcus_aureus_subsp._aureus_ED133 1 1
Staphylococcus_aureus_subsp._aureus_ED98 1 1
Staphylococcus_aureus_subsp._aureus_TW20 1 1
Staphylococcus_aureus_subsp._aureus_55/2053 1 1
Staphylococcus_aureus_subsp._aureus_TCH60 1 1
Staphylococcus_aureus_subsp._aureus_str._JKD6008 1 1
Staphylococcus_aureus_subsp._aureus_71193 1 1
Staphylococcus_aureus_subsp._aureus_S0385 1 1
Staphylococcus_aureus_subsp._aureus_str._Newman 1 1
Staphylococcus_aureus_subsp._aureus_Mu3 1 1
Staphylococcus_aureus_subsp._aureus_USA300_TCH1516 1 1
Staphylococcus_aureus_subsp._aureus_USA300_FPR3757 1 1
Staphylococcus_aureus_subsp._aureus_JH9 1 1
Staphylococcus_aureus_subsp._aureus_MSSA476 1 1
Staphylococcus_aureus_subsp._aureus_MRSA252 1 1
Staphylococcus_aureus_subsp._aureus_MW2 1 1
Staphylococcus_aureus_subsp._aureus_N315 1 1
Staphylococcus_aureus_subsp._aureus_Mu50 1 1
Staphylococcus_aureus_subsp._aureus_COL 1 1
Staphylococcus_aureus_subsp._aureus_NCTC_8325 1 1
Chlorobium_phaeobacteroides_BS1 1 1
Salinibacter_ruber_DSM_13855 2 2
Rhodothermus_marinus_SG0.5JP17-172 2 2
Echinicola_vietnamensis_DSM_17526 3 3
Emticicia_oligotrophica_DSM_17448 2 2
Bacteroides_xylanisolvens_XB1A 1 1
Bacteroides_fragilis_638R 2 2
Bacteroides_fragilis_NCTC_9343 1 1
Nonlabens_dokdonensis_DSW-6 4 4
Psychroflexus_torquis_ATCC_700755 2 2
Fibrobacter_succinogenes_subsp._succinogenes_S85 1 1
Singulisphaera_acidiphila_DSM_18658 7 6
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Ames)' 1 1
Brachyspira_pilosicoli_WesB 3 3
Brachyspira_pilosicoli_B2904 3 3
Brachyspira_pilosicoli_P43/6/78 3 3
Treponema_pedis_str._T_A4 1 1
Thermotoga_maritima_MSB8 2 2
Leptospirillum_ferriphilum_ML-04 1 1
Fusobacterium_nucleatum_subsp._animalis_4_8 1 1
Acidithiobacillus_ferrooxidans_ATCC_23270 4 4
Bdellovibrio_exovorus_JSS 1 1
Bdellovibrio_bacteriovorus_str._Tiberius 1 1
Campylobacter_jejuni_Waterborne_C.jejuni_Outbreak 1 1
Campylobacter_jejuni_RM1221 1 1
Campylobacter_jejuni_subsp._jejuni_ICDCCJ07001 1 1
Campylobacter_jejuni_subsp._jejuni_S3 1 1
Campylobacter_jejuni_subsp._jejuni_M1 1 1
Campylobacter_jejuni_subsp._jejuni_81116 1 1
Desulfocapsa_sulfexigens_DSM_10523 2 2
Desulfobacula_toluolica_Tol2 1 1
Desulfovibrio_vulgaris_str._'Miyazaki_F' 4 4
Desulfovibrio_gigas_DSM_1382_=_ATCC_19364 2 2
Desulfovibrio_desulfuricans_ND132 6 6
Geobacter_sp._M18 2 2
Geobacter_sulfurreducens_PCA 2 2
Sorangium_cellulosum_So0157-2 7 7
Anaeromyxobacter_sp._K 3 3
Anaeromyxobacter_dehalogenans_2CP-C 4 4
Myxococcus_stipitatus_DSM_14675 3 3
Neisseria_meningitidis_WUE_2594 2 2
Neisseria_meningitidis_G2136 2 2
Neisseria_meningitidis_M04-240196 2 2
Neisseria_meningitidis_M01-240149 2 2
Neisseria_meningitidis_NZ-05/33 2 2
Neisseria_meningitidis_M01-240355 2 2
Neisseria_meningitidis_8013 2 2
Neisseria_meningitidis_053442 2 2
Neisseria_meningitidis_Z2491 2 2
Neisseria_meningitidis_H44/76 2 2
Neisseria_meningitidis_alpha710 2 2
Neisseria_meningitidis_MC58 2 2
Neisseria_gonorrhoeae_TCDC-NG08107 2 2
Neisseria_gonorrhoeae_FA_1090 2 2
Burkholderia_phenoliruptrix_BR3459a 13 13
Pandoraea_pnomenusa_3kgm 15 14
Ralstonia_pickettii_12J 14 14
Ralstonia_solanacearum_FQY_4 6 6
Ralstonia_solanacearum_Po82 9 9
Ralstonia_solanacearum_PSI07 9 9
Ralstonia_solanacearum_CMR15 8 8
Ralstonia_solanacearum_GMI1000 7 7
Burkholderia_sp._YI23 15 15
Burkholderia_sp._CCGE1003 17 17
Burkholderia_sp._CCGE1001 11 11
Burkholderia_sp._KJ006 15 15
Burkholderia_thailandensis_MSMB121 12 12
Burkholderia_pseudomallei_MSHR305 9 9
Burkholderia_pseudomallei_NCTC_13179 8 8
Burkholderia_pseudomallei_BPC006 9 9
Burkholderia_pseudomallei_1026b 9 9
Burkholderia_pseudomallei_MSHR346 4 4
Burkholderia_pseudomallei_668 8 8
Burkholderia_pseudomallei_1710b 9 9
Burkholderia_pseudomallei_K96243 9 9
Burkholderia_mallei_NCTC_10229 7 7
Burkholderia_mallei_NCTC_10247 6 6
Burkholderia_mallei_ATCC_23344 7 7
Burkholderia_lata 18 18
Burkholderia_ambifaria_MC40-6 15 15
Burkholderia_cenocepacia_MC0-3 17 17
Burkholderia_cenocepacia_AU_1054 15 15
Burkholderia_cenocepacia_J2315 16 16
Burkholderia_multivorans_ATCC_17616 14 14
Burkholderia_cepacia_GG4 14 14
Candidatus_Symbiobacter_mobilis_Comamonadaceae_bacterium_CR 1 1
Alicycliphilus_denitrificans_BC 12 11
Variovorax_paradoxus_B4 12 12
Variovorax_paradoxus_EPS 9 9
Taylorella_asinigenitalis_14/45 1 1
Taylorella_equigenitalis_14/56 1 1
Taylorella_equigenitalis_ATCC_35865 1 1
Bordetella_pertussis_CS 5 5
Bordetella_parapertussis_18323 5 5
Bordetella_parapertussis_Bpp5 7 7
Bordetella_bronchiseptica_MO149 10 10
Bordetella_bronchiseptica_253 11 11
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 12 11
Sulfuricella_denitrificans_skB26 1 1
Caulobacter_crescentus_CB15 6 6
Phaeobacter_gallaeciensis_DSM_17395 10 10
Phaeobacter_gallaeciensis_DSM_26640 8 8
Leisingera_methylohalidivorans_DSM_14336 11 11
Octadecabacter_antarcticus_307 5 5
Octadecabacter_arcticus_238 8 8
Rhodobacter_sphaeroides_KD131 5 5
Rhodobacter_sphaeroides_ATCC_17025 4 4
Rhodobacter_sphaeroides_2.4.1 5 5
Paracoccus_aminophilus_JCM_7686 5 5
Magnetospirillum_gryphiswaldense_MSR-1_v2 2 2
Rhodospirillum_rubrum_ATCC_11170 2 2
Gluconacetobacter_diazotrophicus_PAl_5 8 8
Gluconobacter_oxydans_H24 1 1
Acetobacter_pasteurianus_386B 2 2
Acetobacter_pasteurianus_IFO_3283-12 2 2
Acetobacter_pasteurianus_IFO_3283-01-42C 2 2
Acetobacter_pasteurianus_IFO_3283-32 2 2
Acetobacter_pasteurianus_IFO_3283-26 2 2
Acetobacter_pasteurianus_IFO_3283-22 2 2
Acetobacter_pasteurianus_IFO_3283-07 2 2
Acetobacter_pasteurianus_IFO_3283-03 2 2
Micavibrio_aeruginosavorus_EPB 3 3
Methylobacterium_extorquens_DM4 1 1
Methylobacterium_extorquens_PA1 1 1
Brucella_ceti_TE10759-12 2 2
Brucella_ceti_TE28753-12 2 2
Brucella_canis_HSK_A52141 2 2
Brucella_suis_VBI22 2 2
Brucella_suis_1330 2 2
Brucella_suis_1330 2 2
Brucella_melitensis_NI 2 2
Brucella_melitensis_M5-90 2 2
Brucella_melitensis_M28 2 2
Brucella_melitensis_bv._1_str._16M 2 2
Brucella_abortus_A13334 2 2
Brucella_melitensis_biovar_Abortus_2308 2 2
Brucella_abortus_bv._1_str._9-941 2 2
Sinorhizobium_fredii_USDA_257 5 5
Sinorhizobium_fredii_HH103 10 9
Sinorhizobium_meliloti_2011 6 6
Sinorhizobium_meliloti_GR4 7 7
Sinorhizobium_meliloti_Rm41 12 11
Sinorhizobium_meliloti_SM11 13 12
Sinorhizobium_meliloti_BL225C 13 12
Sinorhizobium_meliloti_1021 9 8
Rhizobium_etli_CFN_42 12 12
Rhizobium_etli_bv._mimosae_str._Mim1 12 12
Rhizobium_tropici_CIAT_899 11 11
Rhizobium_leguminosarum_bv._trifolii_WSM2304 8 8
Rhizobium_leguminosarum_bv._trifolii_WSM1325 15 14
Mesorhizobium_australicum_WSM2073 11 11
Hyphomicrobium_denitrificans_1NES1 5 5
Oligotropha_carboxidovorans_OM5 6 6
Oligotropha_carboxidovorans_OM5 6 6
Rhodopseudomonas_palustris_DX-1 6 6
Rhodopseudomonas_palustris_TIE-1 6 6
Rhodopseudomonas_palustris_HaA2 6 6
Rhodopseudomonas_palustris_BisB5 5 5
Rhodopseudomonas_palustris_BisB18 3 3
Rhodopseudomonas_palustris_CGA009 5 5
Bradyrhizobium_sp._S23321 21 21
Bradyrhizobium_sp._BTAi1 12 12
Bradyrhizobium_oligotrophicum_S58 13 13
Bradyrhizobium_japonicum_USDA_6 30 30
Simiduia_agarivorans_SA1_=_DSM_21679 1 1
Mannheimia_succiniciproducens_MBEL55E 3 3
Bibersteinia_trehalosi_USDA-ARS-USMARC-192 4 4
Aggregatibacter_actinomycetemcomitans_ANH9381 1 1
Aggregatibacter_actinomycetemcomitans_D11S-1 1 1
Haemophilus_somnus_2336 2 2
Mannheimia_haemolytica_USMARC_2286 2 2
Mannheimia_haemolytica_M42548 2 2
Mannheimia_haemolytica_D174 2 2
Mannheimia_haemolytica_D171 2 2
Mannheimia_haemolytica_D153 2 2
Mannheimia_haemolytica_USDA-ARS-USMARC-183 2 2
Mannheimia_haemolytica_USDA-ARS-USMARC-185 2 2
Pasteurella_multocida_36950 1 1
Haemophilus_parasuis_ZJ0906 1 1
Haemophilus_influenzae_KR494 1 1
Haemophilus_influenzae_F3047 1 1
Haemophilus_influenzae_F3031 1 1
Haemophilus_influenzae_10810 1 1
Haemophilus_influenzae_PittGG 1 1
Haemophilus_influenzae_86-028NP 1 1
Haemophilus_influenzae_R2866 1 1
Haemophilus_influenzae_R2846 1 1
Haemophilus_influenzae_Rd_KW20 1 1
Actinobacillus_suis_H91-0380 2 2
Actinobacillus_pleuropneumoniae_serovar_3_str._JL03 3 3
Actinobacillus_pleuropneumoniae_serovar_7_str._AP76 3 3
Aeromonas_hydrophila_ML09-119 4 4
Vibrio_sp._EJY3 4 4
Vibrio_parahaemolyticus_BB22OP 2 2
Vibrio_alginolyticus_NBRC_15630_=_ATCC_17749 3 3
Vibrio_nigripulchritudo_VibrioScope 1 1
Vibrio_vulnificus_CMCP6 2 2
Vibrio_vulnificus_YJ016 1 1
Idiomarina_loihiensis_GSL_199 3 3
Shewanella_sp._W3-18-1 1 1
Shewanella_sp._ANA-3 3 3
Shewanella_baltica_BA175 2 2
Shewanella_baltica_OS678 3 3
Shewanella_baltica_OS117 3 3
Shewanella_baltica_OS223 3 3
Shewanella_baltica_OS195 3 3
Shewanella_baltica_OS155 3 3
Shewanella_sp._MR-7 3 3
Shewanella_putrefaciens_200 1 1
Glaciecola_psychrophila_170 1 1
Alteromonas_macleodii_str._'Ionian_Sea_UM4b' 3 3
Alteromonas_macleodii_str._'Ionian_Sea_UM7' 3 3
Alteromonas_macleodii_str._'Ionian_Sea_U8' 3 3
Alteromonas_macleodii_str._'Ionian_Sea_U7' 3 3
Alteromonas_macleodii_str._'Ionian_Sea_U4' 3 3
Alteromonas_macleodii_str._'Aegean_Sea_MED64' 4 4
Alteromonas_macleodii_str._'English_Channel_615' 3 3
Alteromonas_macleodii_AltDE1 3 3
Alteromonas_macleodii_str._'English_Channel_673' 2 2
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 2 2
Alteromonas_macleodii_str._'Black_Sea_11' 3 3
Alteromonas_macleodii_ATCC_27126 2 2
Alcanivorax_dieselolei_B5 5 5
Thalassolituus_oleivorans_MIL-1 2 2
Stenotrophomonas_maltophilia_D457 4 4
Stenotrophomonas_maltophilia_JV3 4 4
Stenotrophomonas_maltophilia_R551-3 6 6
Xylella_fastidiosa_9a5c 1 1
Xanthomonas_citri_subsp._citri_Aw12879 2 2
Xanthomonas_campestris_pv._vesicatoria_str._85-10 5 5
Xanthomonas_axonopodis_pv._citrumelo_F1 2 2
Xanthomonas_axonopodis_Xac29-1 2 2
Xanthomonas_oryzae_pv._oryzicola_BLS256 2 2
Xanthomonas_oryzae_pv._oryzae_MAFF_311018 2 2
Xanthomonas_oryzae_pv._oryzae_KACC_10331 2 2
Xanthomonas_campestris_pv._raphani_756C 2 2
Xanthomonas_campestris_pv._campestris_str._8004 2 2
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 2 2
Spiribacter_salinus_M19-40 1 1
Thioalkalivibrio_nitratireducens_DSM_14787 4 4
Thioflavicoccus_mobilis_8321 1 1
Coxiella_burnetii_CbuK_Q154 1 1
Coxiella_burnetii_CbuG_Q212 1 1
Coxiella_burnetii_RSA_331 1 1
Coxiella_burnetii_RSA_493 1 1
Legionella_pneumophila_str._Paris 3 3
Legionella_pneumophila_str._Lens 4 4
Legionella_pneumophila_subsp._pneumophila_LPE509 4 4
Legionella_pneumophila_subsp._pneumophila_str._Thunder_Bay 4 4
Legionella_pneumophila_subsp._pneumophila_str._Philadelphia_1 4 4
Legionella_pneumophila_subsp._pneumophila 3 3
Legionella_pneumophila_subsp._pneumophila 3 3
Legionella_pneumophila_subsp._pneumophila_ATCC_43290 4 4
Legionella_pneumophila_2300/99_Alcoy 3 3
Proteus_mirabilis_BB2000 1 1
Morganella_morganii_subsp._morganii_KT 2 2
Edwardsiella_tarda_C07-087 2 2
Edwardsiella_tarda_FL6-60 2 2
Rahnella_aquatilis_HX2 6 4
Yersinia_pseudotuberculosis_PB1/+ 4 3
Yersinia_pseudotuberculosis_YPIII 4 3
Yersinia_pseudotuberculosis_IP_32953 4 3
Yersinia_pestis_biovar_Microtus_str._91001 4 3
Yersinia_pestis_A1122 4 3
Yersinia_pestis_Z176003 4 3
Yersinia_pestis_D182038 4 3
Yersinia_pestis_D106004 4 3
Yersinia_pestis_biovar_Medievalis_str._Harbin_35 4 3
Yersinia_pestis_Nepal516 4 3
Yersinia_pestis_Antiqua 4 3
Yersinia_pestis_Angola 4 3
Yersinia_pestis_CO92 4 3
Yersinia_pestis_KIM10+ 4 3
Yersinia_enterocolitica_subsp._palearctica_105.5R(r) 1 1
Yersinia_enterocolitica_subsp._palearctica_Y11 3 2
Serratia_sp._AS13 10 8
Serratia_plymuthica_S13 10 8
Serratia_plymuthica_4Rx13 11 9
Serratia_marcescens_FGI94 3 2
Serratia_marcescens_WW4 6 4
Serratia_liquefaciens_ATCC_27592 6 4
Dickeya_dadantii_Ech586 6 5
Dickeya_dadantii_3937 3 2
Pectobacterium_carotovorum_subsp._carotovorum_PCC21 5 4
Pantoea_ananatis_LMG_5342 5 4
Pantoea_ananatis_PA13 4 3
Pantoea_ananatis_AJ13355 5 4
Erwinia_pyrifoliae_DSM_12163 3 2
Erwinia_amylovora_CFBP1430 3 2
Cronobacter_sakazakii_CMCC_45402 7 5
Cronobacter_sakazakii_SP291 7 5
Cronobacter_sakazakii_ATCC_BAA-894 7 5
Raoultella_ornithinolytica_B6 14 12
Shigella_sonnei_53G 2 2
Shigella_flexneri_2002017 3 2
Shigella_flexneri_2a_str._2457T 3 2
Shigella_flexneri_2a_str._301 2 1
Shigella_dysenteriae_1617 4 3
Shigella_boydii_Sb227 3 2
Salmonella_bongori_N268-08 4 3
Salmonella_enterica_subsp._enterica_serovar_4,[5],12:i:-_str._08-1736 3 2
Salmonella_enterica_subsp._enterica_serovar_Javiana_str._CFSAN001992 3 2
Salmonella_enterica_subsp._enterica_serovar_Schwarzengrund_str._CVM19633 3 2
Salmonella_enterica_subsp._enterica_Serovar_Cubana_str._CFSAN002050 4 3
Salmonella_enterica_subsp._enterica_serovar_Enteritidis_str._P125109 3 2
Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67 2 2
Salmonella_enterica_subsp._enterica_serovar_Newport_str._USMARC-S3124.1 3 2
Salmonella_enterica_subsp._enterica_serovar_Newport_str._SL254 3 2
Salmonella_enterica_subsp._enterica_serovar_Dublin_str._CT_02021853 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_var._5-_str._CFSAN001921 3 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._U288 2 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._798 3 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._UK-1 3 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._ST4/74 3 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._T000240 2 2
Salmonella_enterica_The_genome_of__subsp._enterica_serovar_Typhimurium_str._DT2 3 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._D23580 3 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344 3 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._14028S 3 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 2 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_Definitive_Type_104 3 2
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._P-stx-12 2 2
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty21a 2 2
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2 2 2
Salmonella_enterica_serovar_Bovismorbificans_genomics 3 2
Salmonella_enterica_subsp._enterica_serovar_Bareilly_str._CFSAN000189 3 2
Salmonella_enterica_subsp._enterica_serovar_Agona_str._24249 3 2
Salmonella_enterica_subsp._enterica_serovar_Agona_str._SL483 1 1
Salmonella_enterica_subsp._enterica_serovar_Weltevreden_str._2007-60-3289-1 3 2
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_B_str._SPB7 3 2
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._AKU_12601 3 2
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._ATCC_9150 3 2
Salmonella_enterica_subsp._enterica_Serovar_Heidelberg_str._CFSAN002069 3 2
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._B182 3 2
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._41578 3 2
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._SL476 3 2
Salmonella_enterica_subsp._enterica_serovar_Pullorum_str._S06004 1 1
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._CDC1983-67 1 1
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._RKS5078 1 1
Salmonella_enterica_subsp._enterica_serovar_Thompson_str._RM6836 3 2
Salmonella_enterica_subsp._enterica_serovar_Gallinarum_str._287/91 1 1
Klebsiella_oxytoca_KCTC_1686 13 11
Klebsiella_pneumoniae_JM45 11 9
Klebsiella_pneumoniae_CG43 11 9
Klebsiella_pneumoniae_KCTC_2242 12 10
Klebsiella_pneumoniae_342 13 11
Klebsiella_pneumoniae_subsp._pneumoniae_1084 9 8
Klebsiella_pneumoniae_subsp._pneumoniae_HS11286 11 9
Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578 12 10
Klebsiella_pneumoniae_subsp._rhinoscleromatis_SB3432 11 9
Enterobacter_aerogenes_EA1509E 10 8
Escherichia_coli_E24377A 3 2
Escherichia_coli_E._coli_PMV-1 4 3
Escherichia_coli_JJ1886 3 2
Escherichia_coli_LY180 3 2
Escherichia_coli_APEC_O78 3 2
Escherichia_coli_O7:K1_str._CE10 4 3
Escherichia_coli_O104:H4_str._2009EL-2050 3 2
Escherichia_coli_O104:H4_str._2009EL-2071 3 2
Escherichia_coli_O104:H4_str._2011C-3493 3 2
Escherichia_coli_NA114 3 2
Escherichia_coli_P12b 3 2
Escherichia_coli_str._'clone_D_i2' 4 3
Escherichia_coli_str._'clone_D_i14' 4 3
Escherichia_coli_UM146 4 3
Escherichia_coli_042 4 3
Escherichia_coli_Xuzhou21 4 3
Escherichia_coli_IHE3034 4 3
Escherichia_coli_UMNK88 3 2
Escherichia_coli_O83:H1_str._NRG_857C 5 4
Escherichia_coli_ABU_83972 4 3
Escherichia_coli_KO11FL 3 2
Escherichia_coli_KO11FL 3 2
Escherichia_coli_LF82 5 4
Escherichia_coli_ED1a 4 3
Escherichia_coli_IAI39 4 3
Escherichia_coli_UMN026 5 4
Escherichia_coli_55989 3 2
Escherichia_coli_S88 4 3
Escherichia_coli_IAI1 3 2
Escherichia_coli_W 3 2
Escherichia_coli_W 3 2
Escherichia_coli_DH1 3 2
Escherichia_coli_DH1 3 2
Escherichia_coli_ATCC_8739 3 2
Escherichia_coli_BL21(DE3) 3 2
Escherichia_coli_BL21(DE3) 3 2
Escherichia_coli_SMS-3-5 4 3
Escherichia_coli_SE15 3 2
Escherichia_coli_SE11 3 2
Escherichia_coli_APEC_O1 4 3
Escherichia_coli_O103:H2_str._12009 3 2
Escherichia_coli_UTI89 4 3
Escherichia_coli_536 4 3
Escherichia_coli_HS 3 2
Escherichia_coli_ETEC_H10407 3 2
Escherichia_coli_O55:H7_str._RM12579 4 3
Escherichia_coli_O55:H7_str._CB9615 4 3
Escherichia_coli_O26:H11_str._11368 3 2
Escherichia_coli_CFT073 4 3
Escherichia_coli_O111:H-_str._11128 3 2
Escherichia_coli_O127:H6_str._E2348/69 4 3
Escherichia_coli_O157:H7_str._TW14359 4 3
Escherichia_coli_O157:H7_str._EC4115 4 3
Escherichia_coli_O157:H7_str._Sakai 4 3
Escherichia_coli_O157:H7_str._EDL933 4 3
Escherichia_coli_str._K-12_substr._MDS42 3 2
Escherichia_coli_BW2952 3 2
Escherichia_coli_str._K-12_substr._MG1655 3 2
Escherichia_coli_str._K-12_substr._W3110 3 2
Escherichia_coli_str._K-12_substr._DH10B 3 2
Escherichia_coli_B_str._REL606 3 2
Enterobacter_cloacae_SCF1 6 5
Enterobacter_cloacae_EcWSU1 7 7
Enterobacter_cloacae_subsp._cloacae_ENHKU01 7 6
Enterobacter_cloacae_subsp._cloacae_NCTC_9394 3 3
Enterobacter_cloacae_subsp._cloacae_ATCC_13047 4 3
Azotobacter_vinelandii_CA6 5 5
Azotobacter_vinelandii_CA 5 5
Pseudomonas_denitrificans_ATCC_13867 6 6
Pseudomonas_syringae_pv._phaseolicola_1448A 4 4
Pseudomonas_syringae_pv._syringae_B728a 5 5
Pseudomonas_stutzeri_CCUG_29243 5 5
Pseudomonas_stutzeri_DSM_10701 3 3
Pseudomonas_stutzeri_DSM_4166 5 5
Pseudomonas_stutzeri_RCH2 4 4
Pseudomonas_stutzeri_ATCC_17588_=_LMG_11199 5 5
Pseudomonas_monteilii_SB3101 8 8
Pseudomonas_monteilii_SB3078 8 8
Pseudomonas_putida_H8234 5 5
Pseudomonas_putida_HB3267 9 9
Pseudomonas_putida_NBRC_14164 7 7
Pseudomonas_putida_DOT-T1E 9 9
Pseudomonas_putida_S16 8 8
Pseudomonas_putida_BIRD-1 6 6
Pseudomonas_putida_W619 8 8
Pseudomonas_putida_ND6 6 6
Pseudomonas_putida_KT2440 5 5
Pseudomonas_putida_GB-1 6 6
Pseudomonas_protegens_CHA0 4 4
Pseudomonas_poae_RE*1-1-14 2 2
Pseudomonas_fluorescens_F113 13 13
Pseudomonas_fluorescens_A506 5 5
Pseudomonas_fluorescens_R124 6 6
Pseudomonas_fluorescens_Pf0-1 9 9
Pseudomonas_resinovorans_NBRC_106553 7 7
Pseudomonas_mendocina_NK-01 6 6
Pseudomonas_aeruginosa_SCV20265 5 5
Pseudomonas_aeruginosa_MTB-1 5 5
Pseudomonas_aeruginosa_LES431 5 5
Pseudomonas_aeruginosa_RP73 6 6
Pseudomonas_aeruginosa_B136-33 5 5
Pseudomonas_aeruginosa_PA1R 5 5
Pseudomonas_aeruginosa_PA1 5 5
Pseudomonas_aeruginosa_DK2 5 5
Pseudomonas_aeruginosa_NCGM2.S1 5 5
Pseudomonas_aeruginosa_M18 5 5
Pseudomonas_aeruginosa_LESB58 5 5
Pseudomonas_aeruginosa_PA7 5 5
Pseudomonas_aeruginosa_PAO1 5 5
Acinetobacter_genomosp._13TU__RUH2624 2 2
Acinetobacter_sp.__SH024 3 3
Acinetobacter_calcoaceticus_ruh2202 5 5
Acinetobacter_baumannii_ZW85-1 4 4
Acinetobacter_baumannii_TYTH-1 4 4
Acinetobacter_baumannii_BJAB0868 4 4
Acinetobacter_baumannii_BJAB0715 2 2
Acinetobacter_baumannii_BJAB07104 4 4
Acinetobacter_baumannii_TCDC-AB0715 4 4
Acinetobacter_baumannii_D1279779 3 3
Acinetobacter_baumannii_MDR-TJ 4 4
Acinetobacter_baumannii_1656-2 5 5
Acinetobacter_baumannii__ATCC_19606 4 4
Acinetobacter_baumannii_AB307-0294 4 4
Acinetobacter_baumannii_AYE 4 4
Acinetobacter_baumannii_SDF 2 2
Acinetobacter_baumannii_MDR-ZJ06 4 4
Acinetobacter_baumannii_AB0057 4 4
Acinetobacter_baumannii_ACICU 5 5
Acinetobacter_radioresistens__SH164 1 1
Acinetobacter_junii__SH205 2 2
Acinetobacter_johnsonii__SH046 4 4
Acinetobacter_lwoffii__SH145 1 1
Cycloclasticus_zancles_7-ME 1 1
Sulfolobus_islandicus_LAL14/1 1 1
Sulfolobus_islandicus_REY15A 1 1
Sulfolobus_islandicus_HVE10/4 1 1
Sulfolobus_islandicus_Y.G.57.14 1 1
Sulfolobus_islandicus_L.S.2.15 1 1
Sulfolobus_islandicus_M.16.27 1 1
Sulfolobus_islandicus_M.14.25 1 1
Sulfolobus_islandicus_M.16.4 1 1
Sulfolobus_islandicus_L.D.8.5 1 1
Sulfolobus_acidocaldarius_SUSAZ 1 1
Sulfolobus_acidocaldarius_Ron12/I 1 1
Sulfolobus_acidocaldarius_N8 1 1
Methanomethylovorans_hollandica_DSM_15978 4 4
Methanolobus_psychrophilus_R15 6 6
Methanosarcina_mazei_Tuc01 9 9
Methanoregula_formicica_Methanoregula_formicicum_SMSP 3 3
Archaeoglobus_sulfaticallidus_PM70-1 1 1
Thermococcus_sp._CL1 1 1
Thermococcus_litoralis_DSM_5473 1 1
Candidatus_Methanomethylophilus_alvus_Mx1201 3 3
Candidatus_Methanomassiliicoccus_intestinalis_Issoire-Mx1 1 1
Ferroplasma_acidarmanus_fer1 2 2
Halovivax_ruber_XH-70 2 2
Natrinema_pellirubrum_DSM_15624 2 2
Natronococcus_occultus_SP4 4 4
Natronobacterium_gregoryi_SP2 2 2
Halorhabdus_tiamatea_SARL4B 3 3
Natronomonas_moolapensis_8.8.11 2 2
Haloarcula_hispanica_N601 1 1
Methanococcus_maripaludis_X1 3 3
Methanococcus_maripaludis_C6 2 2
Methanococcus_maripaludis_C7 2 2
Methanococcus_maripaludis_S2 3 3
Methanobacterium_sp._SWAN-1 6 6

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   3 3
Pan_troglodytes_69_2.1.4   (Chimpanzee)   3 3
Gorilla_gorilla_69_3.1   (Western gorilla)   3 3
Pongo_abelii_69_2   (Sumatran orangutan)   3 3
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   3 3
Macaca_mulatta_69_1   (Rhesus monkey)   3 3
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   3 3
Otolemur_garnettii_69_3   (Small-eared galago)   4 4
Microcebus_murinus_69_1   (Gray mouse lemur)   2 2
Rattus_norvegicus_69_3.4   (Norway rat)   2 2
Mus_musculus_69_38   (House mouse)   3 3
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   3 3
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   3 3
Cavia_porcellus_69_3   (Domestic guinea pig)   3 3
Oryctolagus_cuniculus_69_2   (Rabbit)   3 3
Ochotona_princeps_69   (American pika)   3 3
Tupaia_belangeri_69   (Northern tree shrew)   2 2
Sus_scrofa_69_10.2   (Pig)   4 4
Bos_taurus_69_3.1   (Cattle)   3 3
Vicugna_pacos_69_1   (Alpaca)   3 3
Tursiops_truncatus_69_1   (Bottlenose dolphin)   3 3
Mustela_putorius_furo_69_1.0   (Domestic ferret)   3 3
Ailuropoda_melanoleuca_69_1   (Giant panda)   3 3
Canis_familiaris_69_3.1   (Dog)   3 3
Felis_catus_69   (Domestic cat)   3 3
Equus_caballus_69_2   (Horse)   3 3
Myotis_lucifugus_69_2.0   (Little brown bat)   3 3
Pteropus_vampyrus_69_1   (Large flying fox)   3 3
Sorex_araneus_69_1   (European shrew)   3 3
Erinaceus_europaeus_69   (Western European hedgehog)   3 3
Procavia_capensis_69_1   (Cape rock hyrax)   3 3
Loxodonta_africana_69_3   (African savanna elephant)   3 3
Echinops_telfairi_69   (Small Madagascar hedgehog)   2 2
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   3 3
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   2 2
Macropus_eugenii_69_1.0   (Tammar wallaby)   3 3
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   4 4
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   4 4
Ornithorhynchus_anatinus_69_5   (Platypus)   3 3
Meleagris_gallopavo_69_2   (Turkey)   3 3
Gallus_gallus_69_2   (Chicken)   4 4
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   4 4
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   5 5
Anolis_carolinensis_69_2.0   (Green anole)   4 4
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   3 3
Latimeria_chalumnae_69_1   (Coelacanth)   4 4
Gadus_morhua_69_1   (Atlantic cod)   4 4
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   4 4
Takifugu_rubripes_69_4   (Torafugu)   3 3
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   4 4
Oryzias_latipes_69_1   (Japanese medaka)   4 4
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   4 4
Oreochromis_niloticus_69_1.0   (Nile tilapia)   3 3
Danio_rerio_69_9   (Zebrafish)   5 5
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   1 1
Ciona_intestinalis_69   (Vase tunicate)   1 1
Drosophila_melanogaster_69_5   (Fruit fly)   1 1
Caenorhabditis_elegans_69_215   (Roundworm)   1 1
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   1 1

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   8 8
Homo_sapiens__(NCBI_version)   (Human)   5 5
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   3 3
Loa_loa_v3.3_(Request)   (Eye worm)   1 1
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   1 1
Moniliophthora_perniciosa_FA553__(Genome_survey) 1 1
Ricinus_communis__(Early_assembly)   (Castor bean)   2 2
Mycobacterium_tuberculosis_H37Rv_(Duplicate_of_ex) 9 8
NCBI_plasmid_sequences_(Plasmids) 344 332
TargetDB__(Targets) 113 111
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 367 367
Protein_Data_Bank_(all_PDB_sequenc) 137 137
STRING_v9.0.5_(STRING) 3035 2925
Uniprot_2018_03_genome 76070 73889
Protozoadb_2010_08_(Protozoadb) 17 17
NCBI_2017_08_genome 333167 306821
PDB_chains_(SCOP_1.75)_(PDB) 15 15
NCBI_viral_sequences_(Viral) 4 4

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.