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Domain combinations for LCCL domain superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a LCCL domain domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   30 24
Pan_troglodytes_76_2.1.4   (Chimpanzee)   8 6
Gorilla_gorilla_76_3.1   (Western gorilla)   12 9
Pongo_abelii_76_2   (Sumatran orangutan)   8 6
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   8 6
Papio_anubis_76   (Olive baboon)   8 6
Macaca_mulatta_76_1   (Rhesus monkey)   11 9
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   22 16
Otolemur_garnettii_76_3   (Small-eared galago)   7 5
Microcebus_murinus_76_1   (Gray mouse lemur)   6 4
Rattus_norvegicus_76_5.0   (Norway rat)   9 7
Mus_musculus_76_38   (House mouse)   16 11
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   7 6
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   13 9
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   8 6
Cavia_porcellus_76_3   (Domestic guinea pig)   7 5
Oryctolagus_cuniculus_76_2   (Rabbit)   7 6
Ochotona_princeps_76   (American pika)   7 5
Tupaia_belangeri_76   (Northern tree shrew)   8 6
Sus_scrofa_76_10.2   (Pig)   10 7
Bos_taurus_76_3.1   (Cattle)   8 6
Ovis_aries_76_3.1   (Sheep)   8 6
Vicugna_pacos_76_1   (Alpaca)   8 6
Tursiops_truncatus_76_1   (Bottlenose dolphin)   8 6
Mustela_putorius_furo_76_1.0   (Domestic ferret)   8 6
Ailuropoda_melanoleuca_76_1   (Giant panda)   10 7
Canis_familiaris_76_3.1   (Dog)   11 8
Felis_catus_76_6.2   (Domestic cat)   8 6
Equus_caballus_76_2   (Horse)   8 6
Myotis_lucifugus_76_2.0   (Little brown bat)   8 6
Pteropus_vampyrus_76_1   (Large flying fox)   8 6
Sorex_araneus_76_1   (European shrew)   4 3
Erinaceus_europaeus_76   (Western European hedgehog)   7 5
Procavia_capensis_76_1   (Cape rock hyrax)   7 6
Loxodonta_africana_76_3   (African savanna elephant)   8 6
Echinops_telfairi_76   (Small Madagascar hedgehog)   8 6
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   8 6
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   8 6
Macropus_eugenii_76_1.0   (Tammar wallaby)   7 6
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   9 6
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   8 6
Ornithorhynchus_anatinus_76_5   (Platypus)   10 7
Saccoglossus_kowalevskii_v3.0 1 1
Petromyzon_marinus_76_7.0   (Sea lamprey)   5 3
Meleagris_gallopavo_76_2   (Turkey)   13 10
Gallus_gallus_76_4   (Chicken)   10 8
Anas_platyrhynchos_76_1.0   (Mallard)   9 7
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   8 6
Ficedula_albicollis_76_1.0   (Collared flycatcher)   9 7
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   10 8
Anolis_carolinensis_76_2.0   (Green anole)   8 6
Xenopus_laevis_   (African clawed frog)   2 2
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   9 7
Latimeria_chalumnae_76_1   (Coelacanth)   9 7
Lepisosteus_oculatus_76   (Spotted gar)   10 8
Gadus_morhua_76_1   (Atlantic cod)   6 5
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   13 9
Takifugu_rubripes_76_4   (Torafugu)   39 32
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   11 7
Oryzias_latipes_76_1   (Japanese medaka)   14 10
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   9 6
Poecilia_formosa_76   (Amazon molly)   9 6
Oreochromis_niloticus_76_1.0   (Nile tilapia)   16 12
Astyanax_mexicanus_76   (Mexican tetra)   11 9
Danio_rerio_76_9   (Zebrafish)   20 16
Oikopleura_dioica 6 6
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   6 5
Ciona_intestinalis_76   (Vase tunicate)   17 11
Adineta_vaga 8 3
Lottia_gigantea_   (Owl limpet)   1 1
Capitella_sp._I_ 1 1
Strigamia_maritima_22 1 1
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   2 2
Mnemiopsis_leidyi   (Sea walnut)   2 2
Sphaeroforma_arctica_JP610_ 2 2
Phycomyces_blakesleeanus_ 1 1
Malassezia_globosa_CBS_7966_ 2 2
Sporisorium_reilianum_22 1 1
Mixia_osmundae_IAM_14324_v1.0 2 2
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 1 1
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 1 1
Rhodotorula_graminis_WP1_v1.0 1 1
Sporobolomyces_roseus_IAM_13481_ 1 1
Microbotryum_violaceum_22 1 1
Sphaerobolus_stellatus_v1.0 2 2
Piloderma_croceum_F_1598_v1.0 1 1
Serpula_lacrymans_var._lacrymans_S7.9_ 1 1
Coniophora_puteana 1 1
Hydnomerulius_pinastri_v2.0 1 1
Paxillus_rubicundulus_Ve08.2h10_v1.0 1 1
Scleroderma_citrinum_Foug_A_v1.0 1 1
Coprinopsis_cinerea_okayama7_130_v3 1 1
Pleurotus_ostreatus_   (Oyster mushroom)   1 1
Amanita_thiersii_Skay4041_v1.0 1 1
Amanita_muscaria_Koide_v1.0   (Fly agaric)   1 1
Galerina_marginata_v1.0 1 1
Hebeloma_cylindrosporum_h7_v2.0 1 1
Laccaria_bicolor_S238N-H82_ 1 1
Agaricus_bisporus_var._bisporus_ 1 1
Schizophyllum_commune_ 1 1
Stereum_hirsutum_FP-91666_SS1__v1.0 1 1
Heterobasidion_annosum_ 1 1
Gloeophyllum_trabeumv1.0 1 1
Punctularia_strigosozonata_v1.0 1 1
Sebacina_vermifera_MAFF_305830_v1.0 1 1
Fomitiporia_mediterranea_v1.0 1 1
Tulasnella_calospora_AL13/4D_v1.0 1 1
Postia_placenta_ 2 2
Wolfiporia_cocos_MD-104_SS10__v1.0 1 1
Fomitopsis_pinicolav1.0 1 1
Fomitopsis_pinicola_FP-58527_SS1_v3.0 1 1
Phanerochaete_chrysosporium_RP-78_2.1 1 1
Dichomitus_squalens 1 1
Trametes_versicolor_v1.0 1 1
Tremella_mesenterica_   (Witches' butter)   2 2
Daldinia_eschscholzii_EC12_v1.0 2 2
Apiospora_montagnei_NRRL_25634_v1.0 3 3
Magnaporthe_grisea_70-15_ 2 2
Podospora_anserina_ 2 2
Sporotrichum_thermophile_ATCC_42464_ 2 2
Thielavia_terrestris_NRRL_8126_ 3 3
Chaetomium_globosum_CBS_148.51_ 3 3
Neurospora_tetrasperma_ 2 2
Neurospora_discreta_FGSC_8579_ 2 2
Neurospora_crassa_OR74A_ 2 2
Cryphonectria_parasitica_   (Chestnut blight fungus)   3 3
Verticillium_dahliae_VdLs.17_ 1 1
Acremonium_alcalophilumv_1.0 1 1
Glomerella_graminicola_22 2 2
Fusarium_graminearum_ 2 2
Nectria_haematococca_mpVI_ 3 3
Fusarium_oxysporum_f._sp._lycopersici_4286_ 2 2
Fusarium_verticillioides_7600_ 2 2
Trichoderma_asperellum_CBS_433.97_v1.0 1 1
Trichoderma_atroviride_ 1 1
Trichoderma_citrinoviride_v1.0 1 1
Trichoderma_reesei_1.2 1 1
Trichoderma_virens_Gv29-8_ 1 1
Trichoderma_harzianum_CBS_226.95_v1.0 1 1
Amorphotheca_resinae_v1.0   (Creosote fungus)   1 1
Botrytis_cinerea_B05.10_ 1 1
Sclerotinia_sclerotiorum_ 1 1
Didymella_exigua_CBS_183.55_v1.0 4 4
Leptosphaeria_maculans_22 4 4
Setosphaeria_turcica_v1.0 4 4
Cochliobolus_miyabeanus_ATCC_44560_v1.0 3 3
Cochliobolus_victoriae_FI3_v1.0 3 3
Cochliobolus_carbonum_26-R-13_v1.0 3 3
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   3 3
Alternaria_brassicicola_ 4 4
Cochliobolus_lunatus_m118_v2.0 3 3
Pyrenophora_teres_f._teres_22 5 5
Pyrenophora_tritici-repentis_ 3 3
Stagonospora_nodorum_ 4 4
Mycosphaerella_graminicola_IPO323_ 1 1
Zasmidium_cellare_ATCC_36951_v1.0 2 2
Dothistroma_septosporum 2 2
Septoria_musiva_v1.0 2 2
Mycosphaerella_fijiensis_CIRAD86_ 2 2
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 2 2
Paracoccidioides_brasiliensis_Pb18_ 2 2
Coccidioides_posadasii_RMSCC_3488_ 3 3
Coccidioides_immitis_RS_ 3 3
Ajellomyces_dermatitidis_SLH14081_ 2 2
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 2 2
Microsporum_canis_CBS_113480_ 2 2
Trichophyton_equinum_CBS_127.97_ 2 2
Trichophyton_verrucosum_HKI_0517_ 2 2
Arthroderma_benhamiae_CBS_112371_ 2 2
Trichophyton_tonsurans_CBS_112818_ 2 2
Trichophyton_rubrum_CBS_118892_ 2 2
Uncinocarpus_reesii_1704_ 2 2
Aspergillus_zonatus_v1.0 3 3
Penicillium_chrysogenum_Wisconsin_54-1255_ 3 3
Penicillium_chrysogenum_v1.0 3 3
Aspergillus_acidus_v1.0 3 3
Aspergillus_fumigatus_Af293 2 2
Aspergillus_brasiliensis_v1.0 3 3
Aspergillus_nidulans_FGSC_A4_ 3 3
Aspergillus_sydowii_v1.0 2 2
Aspergillus_versicolor_v1.0 2 2
Aspergillus_glaucus 3 3
Aspergillus_carbonarius_ITEM_5010_ 3 3
Neosartorya_fischeri_NRRL_181_ 3 3
Aspergillus_terreus_NIH2624_ 3 3
Aspergillus_tubingensis_v1.0 3 3
Aspergillus_wentii_v1.0 3 3
Aspergillus_oryzae_RIB40_ 3 3
Aspergillus_niger_22 3 3
Aspergillus_niger_ATCC_1015_ 2 2
Aspergillus_flavus_NRRL3357_ 2 2
Aspergillus_clavatus_NRRL_1_ 2 2
Penicillium_marneffei_ATCC_18224_ 3 3
Tuber_melanosporum_Mel28_22 1 1
Tuber_melanosporum_Vittad_   (Perigord truffle)   1 1
Dekkera_bruxellensis_CBS_2499_v2.0 1 1
Pichia_membranifaciensv1.0 1 1
Candida_tanzawaensis_NRRL_Y-17324__v1.0 1 1
Candida_dubliniensis_CD36_ 1 1
Candida_tropicalis_MYA-3404_ 1 1
Candida_parapsilosis_ 1 1
Candida_albicans_SC5314 1 1
Lodderomyces_elongisporus_NRRL_YB-4239_ 1 1
Babjeviella_inositovora_NRRL_Y-12698_v1.0 1 1
Pichia_stipitis_CBS_6054_ 1 1
Candida_guilliermondii_ATCC_6260_ 1 1
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 1 1
Debaromyces_hansenii 1 1
Wickerhamomyces_anomalus 1 1
Pichia_pastoris_GS115_ 1 1
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 1 1
Yarrowia_lipolytica_CLIB122 1 1
Candida_lusitaniae_ATCC_42720_ 1 1
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 1 1
Vanderwaltozyma_polyspora_DSM_70294_ 1 1
Candida_glabrata_CBS138 1 1
Kluyveromyces_thermotolerans_CBS_6340 1 1
Lachancea_kluyveri_ 2 2
Kluyveromyces_waltii 1 1
Ashbya_gossypii_ATCC_10895_ 1 1
Zygosaccharomyces_rouxii_ 1 1
Saccharomyces_mikatae_MIT 1 1
Saccharomyces_paradoxus_MIT 1 1
Saccharomyces_cerevisiae_76   (Baker's yeast)   1 1
Saccharomyces_bayanus_MIT 1 1
Kluyveromyces_lactis 1 1
Schizosaccharomyces_cryophilus_OY26_22 1 1
Schizosaccharomyces_octosporus_yFS286_ 1 1
Schizosaccharomyces_japonicus_yFS275_ 1 1
Schizosaccharomyces_pombe   (Fission yeast)   1 1
Allomyces_macrogynus_ATCC_38327_ 2 2
Spizellomyces_punctatus_DAOM_BR117_ 1 1
Selaginella_moellendorffii_ 1 1
Theobroma_cacao_B97-61/B2_v1   (Cacao)   1 1
Gossypium_raimondii_v221 1 1
Thellungiella_halophila_v173 3 3
Arabidopsis_lyrata_   (Lyrate rockcress)   1 1
Arabidopsis_thaliana_10   (Thale cress)   3 3
Carica_papaya_   (Papaya)   1 1
Medicago_truncatula_   (Barrel medic)   2 2
Phaseolus_vulgaris_v186   (French bean)   4 4
Glycine_max_v109   (Soybean)   4 4
Cucumis_sativus_v122   (Cucumber)   1 1
Malus_domestica_v196   (Apple)   1 1
Prunus_persica_v139   (Peach)   1 1
Linum_usitatissimum_v200   (Flax)   2 2
Manihot_esculenta_v147   (Cassava)   1 1
Populus_trichocarpa_v156   (Black cottonwood)   2 2
Vitis_vinifera_   (Wine grape)   1 1
Mimulus_guttatus_v140   (Spotted monkey flower)   1 1
Solanum_lycopersicum_v.2.3   (Tomato)   1 1
Actinidia_chinensis_Hongyang_ 2 2
Aquilegia_coerulea_v195 3 3
Triticum_aestivum_22   (Bread wheat)   3 3
Aegilops_tauschii_22 1 1
Brachypodium_distachyon_   (Stiff brome)   3 3
Oryza_barthii_22   (African wild rice)   1 1
Oryza_meridionalis_22 2 2
Oryza_glumaepatula_22 1 1
Oryza_glaberrima   (African rice)   1 1
Oryza_punctata_22 3 3
Oryza_nivara_22 1 1
Oryza_brachyantha_22   (Malo sina)   1 1
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   1 1
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   2 2
Panicum_virgatum_v202   (Switchgrass)   7 7
Setaria_italica_v164   (Foxtail millet)   2 2
Zea_mays_subsp._mays_   (Maize)   4 4
Zea_mays_v181   (Maize)   4 4
Sorghum_bicolor_   (Sorghum)   3 3
Musa_acuminata_22   (Wild Malaysian banana)   1 1
Amborella_trichopoda_22 1 1
Physcomitrella_patens 3 3
Chlorella_variabilis_sp._NC64A_ 10 6
Ostreococcus_lucimarinus_CCE9901_ 1 1
Ostreococcus_tauri_ 1 1
Micromonas_sp._RCC299_ 1 1
Bigelowiella_natans_CCMP2755_22 1 1
Ectocarpus_siliculosus 1 1
Albugo_laibachii_22 1 1
Pythium_iwayamai_DAOM_BR242034_22 2 2
Pythium_arrhenomanes_ATCC_12531_22 1 1
Pythium_ultimum_v1.7-2 1 1
Pythium_aphanidermatum_DAOM_BR444_22 2 2
Pythium_irregulare_DAOM_BR486_22 2 2
Pythium_vexans_DAOM_BR484_22 2 2
Phytophthora_infestans_T30-4_ 2 2
Tetrahymena_thermophila_SB210_1_ 1 1
Cryptosporidium_hominis 6 3
Cryptosporidium_muris 6 3
Cryptosporidium_parvum_Iowa_II 6 3
Neospora_caninum 8 5
Toxoplasma_gondii_VEG 12 6
Toxoplasma_gondii_ME49 12 6
Toxoplasma_gondii_GT1 8 5
Babesia_bovis_T2Bo_ 12 6
Theileria_parva__ 6 3
Theileria_annulata 6 3
Plasmodium_falciparum_3D7_ 8 5
Plasmodium_vivax_SaI-1_7.0 8 5
Plasmodium_knowlesi_strain_H_ 8 5
Plasmodium_yoelii_ssp._yoelii_1_ 7 4
Plasmodium_chabaudi_ 8 5
Plasmodium_berghei_ANKA_ 8 5
Symbiodinium_minutum_clade_B1_v1.2 2 2
Naegleria_gruberi_ 1 1
Guillardia_theta_CCMP2712_v1.0_ 6 6
Emiliania_huxleyi_CCMP1516_ 1 1
Rhodococcus_jostii_RHA1 1 1
Sphaerochaeta_pleomorpha_str._Grapes 1 1
Sphaerochaeta_globus_str._Buddy 3 2
Syntrophobacter_fumaroxidans_MPOB 2 1
Corallococcus_coralloides_DSM_2259 2 1
Azoarcus_sp._BH72 2 1
Jannaschia_sp._CCS1 3 2

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   13 9
Cryptococcus_neoformans_var._grubii_H99_ 1 1
Cryptococcus_neoformans_B-3501A_ 1 1
Cryptococcus_neoformans_JEC21_ 1 1
Paracoccidioides_brasiliensis_Pb01_ 2 2
Paracoccidioides_brasiliensis_Pb03_ 2 2
Coccidioides_posadasii_str._Silveira_ 3 3
Coccidioides_immitis_RMSCC_3703_ 2 2
Coccidioides_immitis_RMSCC_2394_ 3 3
Coccidioides_immitis_H538.4_ 2 2
Ajellomyces_dermatitidis_ER-3_ 2 2
Histoplasma_capsulatum_H143 2 2
Histoplasma_capsulatum_H88 2 2
Histoplasma_capsulatum_G186AR 2 2
Aspergillus_fumigatus_A1163_ 2 2
Candida_albicans_WO-1_ 1 1
Saccharomyces_cerevisiae_UC5 1 1
Saccharomyces_cerevisiae_PW5 1 1
Saccharomyces_cerevisiae_CBS7960 1 1
Saccharomyces_cerevisiae_YJM269 1 1
Saccharomyces_cerevisiae_T7 1 1
Saccharomyces_cerevisiae_FostersB 1 1
Saccharomyces_cerevisiae_Vin13 1 1
Saccharomyces_cerevisiae_AWRI796 1 1
Saccharomyces_cerevisiae_Sigma1278b 1 1
Saccharomyces_cerevisiae_W303 1 1
Saccharomyces_cerevisiae_JAY291 1 1
Saccharomyces_cerevisiae_YPS163 1 1
Saccharomyces_cerevisiae_CLIB215 1 1
Saccharomyces_cerevisiae_Y10 1 1
Saccharomyces_cerevisiae_YJM789_ 1 1
Saccharomyces_cerevisiae_YJM789 1 1
Saccharomyces_cerevisiae_RM11-1a 1 1
Saccharomyces_cerevisiae_RM11-1a_ 1 1
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   1 1
Schizosaccharomyces_pombe_972h-_ 1 1
Hordeum_vulgare_22   (Domesticated barley)   2 2
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   1 1
Neospora_caninum_Nc-Liverpool_6.2 8 5
Plasmodium_falciparum_HB3_ 8 5
Plasmodium_falciparum_Dd2_ 8 5
Synechococcus_sp._PCC_7002 3 2
Myxococcus_stipitatus_DSM_14675 2 1
Octadecabacter_antarcticus_307 1 1

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Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   8 6
Pan_troglodytes_69_2.1.4   (Chimpanzee)   8 6
Gorilla_gorilla_69_3.1   (Western gorilla)   10 7
Pongo_abelii_69_2   (Sumatran orangutan)   8 6
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   8 6
Macaca_mulatta_69_1   (Rhesus monkey)   8 6
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   8 6
Otolemur_garnettii_69_3   (Small-eared galago)   7 5
Microcebus_murinus_69_1   (Gray mouse lemur)   6 4
Rattus_norvegicus_69_3.4   (Norway rat)   8 6
Mus_musculus_69_38   (House mouse)   8 6
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   7 6
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   10 7
Cavia_porcellus_69_3   (Domestic guinea pig)   7 5
Oryctolagus_cuniculus_69_2   (Rabbit)   6 5
Ochotona_princeps_69   (American pika)   7 5
Tupaia_belangeri_69   (Northern tree shrew)   8 6
Sus_scrofa_69_10.2   (Pig)   8 6
Bos_taurus_69_3.1   (Cattle)   8 6
Vicugna_pacos_69_1   (Alpaca)   8 6
Tursiops_truncatus_69_1   (Bottlenose dolphin)   8 6
Mustela_putorius_furo_69_1.0   (Domestic ferret)   8 6
Ailuropoda_melanoleuca_69_1   (Giant panda)   8 6
Canis_familiaris_69_3.1   (Dog)   8 6
Felis_catus_69   (Domestic cat)   6 5
Equus_caballus_69_2   (Horse)   8 6
Myotis_lucifugus_69_2.0   (Little brown bat)   8 6
Pteropus_vampyrus_69_1   (Large flying fox)   8 6
Sorex_araneus_69_1   (European shrew)   4 3
Erinaceus_europaeus_69   (Western European hedgehog)   7 5
Procavia_capensis_69_1   (Cape rock hyrax)   7 6
Loxodonta_africana_69_3   (African savanna elephant)   8 6
Echinops_telfairi_69   (Small Madagascar hedgehog)   8 6
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   6 5
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   8 6
Macropus_eugenii_69_1.0   (Tammar wallaby)   7 6
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   7 5
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   8 6
Ornithorhynchus_anatinus_69_5   (Platypus)   8 6
Petromyzon_marinus_69_7.0   (Sea lamprey)   5 3
Meleagris_gallopavo_69_2   (Turkey)   9 7
Gallus_gallus_69_2   (Chicken)   8 6
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   8 6
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   9 7
Anolis_carolinensis_69_2.0   (Green anole)   8 6
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   6 5
Latimeria_chalumnae_69_1   (Coelacanth)   7 6
Gadus_morhua_69_1   (Atlantic cod)   6 5
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   11 8
Takifugu_rubripes_69_4   (Torafugu)   10 7
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   9 6
Oryzias_latipes_69_1   (Japanese medaka)   10 7
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   9 6
Oreochromis_niloticus_69_1.0   (Nile tilapia)   10 7
Danio_rerio_69_9   (Zebrafish)   10 7
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   6 5
Ciona_intestinalis_69   (Vase tunicate)   17 11
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   1 1
Arabidopsis_thaliana_10   (Thale cress)   1 1

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   31 25
Homo_sapiens__(NCBI_version)   (Human)   13 11
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   8 6
Lotus_japonicus__(Early_assembly) 2 2
Malus_x_domestica_(Duplicate)   (Apple)   1 1
Nicotiana_benthamiana_0.4.4_(Early_draft) 2 2
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   1 1
NCBI_2017_08_genome 4448 3401
PDB_chains_(SCOP_1.75)_(PDB) 1 1
TargetDB__(Targets) 19 10
Protein_Data_Bank_(all_PDB_sequenc) 1 1
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 3 3
Protozoadb_2010_08_(Protozoadb) 141 84
STRING_v9.0.5_(STRING) 393 287
Uniprot_2018_03_genome 4268 3333

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