SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for Major surface antigen p30, SAG1 superfamily in groups of genomes

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Major surface antigen p30, SAG1 domain in that genome.

Complete genomes
Genome     Number   Proteins
Neospora_caninum 403 216
Toxoplasma_gondii_VEG 115 68
Toxoplasma_gondii_ME49 149 88
Toxoplasma_gondii_GT1 123 72

Strains
Genome     Number   Proteins
Neospora_caninum_Nc-Liverpool_6.2 403 216

Others
Genome     Number   Proteins
Protozoadb_2010_08_(Protozoadb) 302 177
NCBI_2017_08_genome 598 340
Uniprot_2018_03_genome 3233 1958
PDB_chains_(SCOP_1.75)_(PDB) 4 2
Protein_Data_Bank_(all_PDB_sequenc) 16 8
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 36 36
TargetDB__(Targets) 36 24

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