Domain combinations for HCP-like superfamily in groups of genomes

• All genomes
• All eukaryote genomes (domain E)
• All bacterial genomes (domain B+A)
• All eubacterial genomes (domain B)
• All archaeal genomes (domain A)

Groups of genomes may be slower than individual genomes.

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Click on a genome below to view all domain combinations containing a HCP-like domain in that genome.

Complete genomes

Genome		Number	Proteins
Homo_sapiens_76_38	(Human)	37	28
Pan_troglodytes_76_2.1.4	(Chimpanzee)	17	11
Gorilla_gorilla_76_3.1	(Western gorilla)	25	17
Pongo_abelii_76_2	(Sumatran orangutan)	21	15
Nomascus_leucogenys_76_1.0	(Northern white-cheeked gibbon)	21	14
Papio_anubis_76	(Olive baboon)	18	13
Macaca_mulatta_76_1	(Rhesus monkey)	26	18
Callithrix_jacchus_76_3.2.1	(White-tufted-ear marmoset)	29	21
Otolemur_garnettii_76_3	(Small-eared galago)	15	10
Microcebus_murinus_76_1	(Gray mouse lemur)	14	11
Rattus_norvegicus_76_5.0	(Norway rat)	22	15
Mus_musculus_76_38	(House mouse)	33	24
Dipodomys_ordii_76_1	(Ord's kangaroo rat)	13	8
Ictidomys_tridecemlineatus_76_2	(Thirteen-lined ground squirrel)	21	14
Heterocephalus_glaber_v1.7-2	(Naked mole-rat)	17	12
Cavia_porcellus_76_3	(Domestic guinea pig)	19	12
Oryctolagus_cuniculus_76_2	(Rabbit)	17	11
Ochotona_princeps_76	(American pika)	13	8
Tupaia_belangeri_76	(Northern tree shrew)	14	8
Sus_scrofa_76_10.2	(Pig)	18	13
Bos_taurus_76_3.1	(Cattle)	18	12
Ovis_aries_76_3.1	(Sheep)	22	15
Vicugna_pacos_76_1	(Alpaca)	14	8
Tursiops_truncatus_76_1	(Bottlenose dolphin)	18	13
Mustela_putorius_furo_76_1.0	(Domestic ferret)	22	15
Ailuropoda_melanoleuca_76_1	(Giant panda)	17	11
Canis_familiaris_76_3.1	(Dog)	23	15
Felis_catus_76_6.2	(Domestic cat)	17	12
Equus_caballus_76_2	(Horse)	18	12
Myotis_lucifugus_76_2.0	(Little brown bat)	16	11
Pteropus_vampyrus_76_1	(Large flying fox)	18	12
Sorex_araneus_76_1	(European shrew)	12	7
Erinaceus_europaeus_76	(Western European hedgehog)	14	9
Procavia_capensis_76_1	(Cape rock hyrax)	12	7
Loxodonta_africana_76_3	(African savanna elephant)	22	14
Echinops_telfairi_76	(Small Madagascar hedgehog)	13	7
Dasypus_novemcinctus_76_2	(Nine-banded armadillo)	20	12
Choloepus_hoffmanni_76_1	(Hoffmann's two-fingered sloth)	18	10
Macropus_eugenii_76_1.0	(Tammar wallaby)	12	8
Sarcophilus_harrisii_76_7.0	(Tasmanian devil)	16	11
Monodelphis_domestica_76_5	(Gray short-tailed opossum)	15	10
Ornithorhynchus_anatinus_76_5	(Platypus)	18	14
Saccoglossus_kowalevskii_v3.0		23	19
Petromyzon_marinus_76_7.0	(Sea lamprey)	6	5
Meleagris_gallopavo_76_2	(Turkey)	15	11
Gallus_gallus_76_4	(Chicken)	15	11
Anas_platyrhynchos_76_1.0	(Mallard)	21	13
Taeniopygia_guttata_76_3.2.4	(Zebra finch)	19	13
Ficedula_albicollis_76_1.0	(Collared flycatcher)	15	10
Pelodiscus_sinensis_76_1.0	(Chinese soft-shelled turtle)	28	21
Anolis_carolinensis_76_2.0	(Green anole)	17	13
Xenopus_laevis_	(African clawed frog)	20	16
Xenopus_tropicalis_76_4.2	(Tropical clawed frog)	15	9
Latimeria_chalumnae_76_1	(Coelacanth)	34	18
Lepisosteus_oculatus_76	(Spotted gar)	28	17
Gadus_morhua_76_1	(Atlantic cod)	14	9
Tetraodon_nigroviridis_76_8	(Spotted green pufferfish)	22	18
Takifugu_rubripes_76_4	(Torafugu)	29	20
Gasterosteus_aculeatus_76_1	(Three-spined stickleback)	15	11
Oryzias_latipes_76_1	(Japanese medaka)	18	13
Xiphophorus_maculatus_76_4.4.2	(Southern platyfish)	18	12
Poecilia_formosa_76	(Amazon molly)	23	14
Oreochromis_niloticus_76_1.0	(Nile tilapia)	32	19
Astyanax_mexicanus_76	(Mexican tetra)	25	17
Danio_rerio_76_9	(Zebrafish)	28	23
Oikopleura_dioica		10	9
Ciona_savignyi_76_2.0	(Pacific transparent sea squirt)	8	5
Ciona_intestinalis_76	(Vase tunicate)	18	14
Strongylocentrotus_purpuratus_v3.1	(Purple sea urchin)	22	17
Adineta_vaga		135	124
Octopus_bimaculoides_280		15	11
Crassostrea_gigas_22	(Pacific oyster)	15	10
Lottia_gigantea_	(Owl limpet)	15	12
Helobdella_robusta_		13	10
Capitella_sp._I_		21	13
Danaus_plexippus_OGS1.0	(Monarch butterfly)	7	5
Heliconius_melpomene_	(Postman butterfly)	6	4
Bombyx_mori_	(Domestic silkworm)	7	5
Nasonia_vitripennis_	(Jewel wasp)	9	7
Apis_mellifera_38.2d_(Not_maintained)	(Honey bee)	18	9
Harpegnathos_saltator_v3.3	(Jerdon's jumping ant)	7	4
Linepithema_humile_v1.1	(Argentine ant)	13	9
Pogonomyrmex_barbatus_v1.2	(Red harvester ant)	13	9
Solenopsis_invicta_v.2.2.3	(Red fire ant)	10	7
Acromyrmex_echinatior_v3.8	(Panamanian leafcutter ant)	11	8
Atta_cephalotes_v1.1		13	10
Camponotus_floridanus_v3.3	(Florida carpenter ant)	13	8
Lucilia_cuprina	(Australian sheep blowfly)	9	5
Drosophila_grimshawi_1.3		4	2
Drosophila_willistoni_1.3		5	3
Drosophila_pseudoobscura_2.13		4	2
Drosophila_persimilis_1.3		4	2
Drosophila_suzukii		12	4
Drosophila_yakuba_1.3		7	4
Drosophila_simulans_1.3		3	1
Drosophila_sechellia_1.3		8	4
Drosophila_melanogaster_76_5	(Fruit fly)	12	7
Drosophila_erecta_1.3		5	2
Drosophila_ananassae_1.3		6	3
Drosophila_virilis_1.2		6	4
Drosophila_mojavensis_1.3		5	3
Aedes_aegypti_55_(Not_maintained)	(Yellow fever mosquito)	10	6
Culex_pipiens_quinquefasciatus_	(Southern house mosquito)	8	6
Anopheles_darlingi_22	(American malaria mosquito)	3	3
Anopheles_gambiae_49_3j	(African malaria mosquito)	7	5
Tribolium_castaneum_3.0	(Red flour beetle)	9	7
Pediculus_humanus_corporis__(Early_assembly)	(Human body louse)	10	7
Acyrthosiphon_pisum_	(Pea aphid)	15	10
Rhodnius_prolixus_22		10	6
Daphnia_pulex_	(Common water flea)	16	14
Strigamia_maritima_22		25	18
Sarcoptes_scabiei		8	6
Tetranychus_urticae_	(Two-spotted spider mite)	7	5
Ixodes_scapularis__(Preliminary)	(Black-legged tick)	7	6
Pristionchus_pacificus_		6	3
Meloidogyne_incognita_	(Southern root-knot nematode)	4	3
Meloidogyne_hapla_		3	2
Onchocerca_volvulus_22		10	7
Brugia_malayi_WS250	(Agent of lymphatic filariasis)	13	9
Caenorhabditis_japonica_		8	8
Caenorhabditis_brenneri_		8	4
Caenorhabditis_remanei_		10	7
Caenorhabditis_elegans_76_235	(Roundworm)	10	8
Caenorhabditis_briggsae_2		9	7
Trichinella_spiralis_22		9	7
Hymenolepis_microstoma_		10	7
Echinococcus_multilocularis_		8	5
Echinococcus_granulosus_		10	7
Taenia_solium_	(Pork tapeworm)	8	5
Schistosoma_mansoni_		11	7
Mnemiopsis_leidyi	(Sea walnut)	16	14
Thelohanellus_kitauei		2	2
Acropora_digitifera_v1.0		27	26
Nematostella_vectensis_1.0	(Starlet sea anemone)	27	23
Hydra_vulgaris		10	8
Amphimedon_queenslandica		15	11
Trichoplax_adhaerens_		103	52
Proterospongia_sp._ATCC_50818_		35	33
Monosiga_brevicollis_		15	10
Sphaeroforma_arctica_JP610_		12	10
Capsaspora_owczarzaki_ATCC_30864_		34	15
Conidiobolus_coronatus_NRRL28638_v1.0		28	16
Mortierella_verticillata_NRRL_6337_		62	32
Phycomyces_blakesleeanus_		68	34
Rhizopus_oryzae_RA_99-880_		70	32
Mucor_circinelloides_		80	40
Rhizomucor_miehei_CAU432_		88	42
Malassezia_globosa_CBS_7966_		22	16
Sporisorium_reilianum_22		8	6
Ustilago_maydis_		10	8
Mixia_osmundae_IAM_14324_v1.0		8	6
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0		9	6
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_		9	6
Melampsora_laricis-populina_		11	8
Rhodotorula_graminis_WP1_v1.0		7	5
Sporobolomyces_roseus_IAM_13481_		4	4
Microbotryum_violaceum_22		9	7
Wallemia_sebi_v1.0		10	7
Sphaerobolus_stellatus_v1.0		60	49
Piloderma_croceum_F_1598_v1.0		83	65
Serpula_lacrymans_var._lacrymans_S7.9_		20	13
Coniophora_puteana		11	8
Hydnomerulius_pinastri_v2.0		37	30
Paxillus_rubicundulus_Ve08.2h10_v1.0		13	10
Pisolithus_microcarpus_441_v1.0		20	15
Pisolithus_tinctorius_Marx_270_v1.0		26	18
Scleroderma_citrinum_Foug_A_v1.0		40	32
Coprinopsis_cinerea_okayama7_130_v3		20	18
Pleurotus_ostreatus_	(Oyster mushroom)	12	9
Amanita_thiersii_Skay4041_v1.0		10	7
Amanita_muscaria_Koide_v1.0	(Fly agaric)	9	6
Galerina_marginata_v1.0		55	43
Hebeloma_cylindrosporum_h7_v2.0		17	12
Laccaria_bicolor_S238N-H82_		39	32
Agaricus_bisporus_var._bisporus_		10	7
Schizophyllum_commune_		12	9
Stereum_hirsutum_FP-91666_SS1__v1.0		18	14
Heterobasidion_annosum_		17	14
Gloeophyllum_trabeumv1.0		17	12
Punctularia_strigosozonata_v1.0		16	13
Sebacina_vermifera_MAFF_305830_v1.0		55	47
Fomitiporia_mediterranea_v1.0		82	70
Tulasnella_calospora_AL13/4D_v1.0		32	27
Postia_placenta_		19	12
Wolfiporia_cocos_MD-104_SS10__v1.0		13	9
Fomitopsis_pinicolav1.0		13	9
Fomitopsis_pinicola_FP-58527_SS1_v3.0		14	10
Phanerochaete_chrysosporium_RP-78_2.1		10	7
Dichomitus_squalens		10	7
Trametes_versicolor_v1.0		10	7
Tremella_mesenterica_	(Witches' butter)	10	6
Daldinia_eschscholzii_EC12_v1.0		9	7
Apiospora_montagnei_NRRL_25634_v1.0		9	7
Magnaporthe_poae_ATCC_64411_22		12	6
Magnaporthe_grisea_70-15_		9	7
Podospora_anserina_		10	8
Sporotrichum_thermophile_ATCC_42464_		11	8
Thielavia_terrestris_NRRL_8126_		11	9
Chaetomium_globosum_CBS_148.51_		12	9
Neurospora_tetrasperma_		9	7
Neurospora_discreta_FGSC_8579_		9	7
Neurospora_crassa_OR74A_		10	8
Cryphonectria_parasitica_	(Chestnut blight fungus)	12	9
Verticillium_albo-atrum_VaMs.102_		9	7
Verticillium_dahliae_VdLs.17_		13	10
Acremonium_alcalophilumv_1.0		10	7
Glomerella_graminicola_22		12	9
Fusarium_graminearum_		16	12
Nectria_haematococca_mpVI_		18	13
Fusarium_oxysporum_f._sp._lycopersici_4286_		26	24
Fusarium_verticillioides_7600_		15	12
Trichoderma_asperellum_CBS_433.97_v1.0		13	8
Trichoderma_atroviride_		13	9
Trichoderma_citrinoviride_v1.0		8	5
Trichoderma_reesei_1.2		11	7
Trichoderma_virens_Gv29-8_		14	9
Trichoderma_longibrachiatum_ATCC_18648_v1.0		12	7
Trichoderma_harzianum_CBS_226.95_v1.0		14	10
Amorphotheca_resinae_v1.0	(Creosote fungus)	11	8
Botrytis_cinerea_B05.10_		10	8
Sclerotinia_sclerotiorum_		14	10
Blumeria_graminis_22		13	9
Didymella_exigua_CBS_183.55_v1.0		11	9
Leptosphaeria_maculans_22		12	8
Setosphaeria_turcica_v1.0		11	8
Cochliobolus_miyabeanus_ATCC_44560_v1.0		10	7
Cochliobolus_victoriae_FI3_v1.0		10	7
Cochliobolus_carbonum_26-R-13_v1.0		10	7
Cochliobolus_heterostrophus_	(Southern corn leaf blight pathogen)	10	7
Alternaria_brassicicola_		12	8
Cochliobolus_lunatus_m118_v2.0		11	7
Pyrenophora_teres_f._teres_22		12	8
Pyrenophora_tritici-repentis_		11	7
Stagonospora_nodorum_		11	7
Mycosphaerella_graminicola_IPO323_		12	9
Zasmidium_cellare_ATCC_36951_v1.0		11	7
Dothistroma_septosporum		9	6
Septoria_musiva_v1.0		11	8
Mycosphaerella_fijiensis_CIRAD86_		8	6
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0		9	7
Paracoccidioides_brasiliensis_Pb18_		12	9
Coccidioides_posadasii_RMSCC_3488_		14	11
Coccidioides_immitis_RS_		14	10
Ajellomyces_dermatitidis_SLH14081_		12	9
Histoplasma_capsulatum_class_NAmI_strain_WU24_		12	9
Microsporum_canis_CBS_113480_		13	10
Trichophyton_equinum_CBS_127.97_		13	10
Trichophyton_verrucosum_HKI_0517_		12	9
Arthroderma_benhamiae_CBS_112371_		11	8
Trichophyton_tonsurans_CBS_112818_		8	7
Trichophyton_rubrum_CBS_118892_		11	8
Uncinocarpus_reesii_1704_		10	7
Aspergillus_zonatus_v1.0		12	9
Penicillium_chrysogenum_Wisconsin_54-1255_		11	7
Penicillium_chrysogenum_v1.0		10	6
Aspergillus_acidus_v1.0		11	8
Aspergillus_fumigatus_Af293		11	7
Aspergillus_brasiliensis_v1.0		13	10
Aspergillus_nidulans_FGSC_A4_		14	9
Aspergillus_sydowii_v1.0		11	6
Aspergillus_versicolor_v1.0		13	9
Aspergillus_glaucus		11	7
Aspergillus_carbonarius_ITEM_5010_		10	7
Neosartorya_fischeri_NRRL_181_		12	8
Aspergillus_terreus_NIH2624_		10	7
Aspergillus_tubingensis_v1.0		11	8
Aspergillus_wentii_v1.0		11	9
Aspergillus_oryzae_RIB40_		11	9
Aspergillus_niger_22		13	10
Aspergillus_niger_ATCC_1015_		9	6
Aspergillus_flavus_NRRL3357_		12	9
Aspergillus_clavatus_NRRL_1_		10	7
Penicillium_marneffei_ATCC_18224_		10	7
Tuber_melanosporum_Mel28_22		11	8
Tuber_melanosporum_Vittad_	(Perigord truffle)	11	8
Hansenula_polymorpha_v2.0		12	8
Dekkera_bruxellensis_CBS_2499_v2.0		9	7
Pichia_membranifaciensv1.0		8	6
Candida_tanzawaensis_NRRL_Y-17324__v1.0		7	5
Candida_dubliniensis_CD36_		9	6
Candida_tropicalis_MYA-3404_		11	7
Candida_parapsilosis_		8	7
Candida_albicans_SC5314		9	6
Lodderomyces_elongisporus_NRRL_YB-4239_		5	4
Babjeviella_inositovora_NRRL_Y-12698_v1.0		8	5
Pichia_stipitis_CBS_6054_		9	7
Candida_guilliermondii_ATCC_6260_		8	5
Hyphopichia_burtonii_NRRL_Y-1933_v1.0		8	6
Debaromyces_hansenii		8	6
Wickerhamomyces_anomalus		8	6
Pichia_pastoris_GS115_		9	6
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1		6	5
Yarrowia_lipolytica_CLIB122		11	8
Candida_lusitaniae_ATCC_42720_		8	6
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0		9	5
Vanderwaltozyma_polyspora_DSM_70294_		14	10
Candida_glabrata_CBS138		9	6
Kluyveromyces_thermotolerans_CBS_6340		7	5
Lachancea_kluyveri_		9	7
Kluyveromyces_waltii		9	8
Ashbya_gossypii_ATCC_10895_		10	8
Zygosaccharomyces_rouxii_		10	7
Saccharomyces_mikatae_MIT		12	8
Saccharomyces_paradoxus_MIT		11	7
Saccharomyces_cerevisiae_76	(Baker's yeast)	11	8
Saccharomyces_bayanus_MIT		11	8
Kluyveromyces_lactis		10	6
Schizosaccharomyces_cryophilus_OY26_22		10	6
Schizosaccharomyces_octosporus_yFS286_		11	7
Schizosaccharomyces_japonicus_yFS275_		17	10
Schizosaccharomyces_pombe	(Fission yeast)	14	9
Catenaria_anguillulae_PL171_v1.0		25	17
Allomyces_macrogynus_ATCC_38327_		66	40
Spizellomyces_punctatus_DAOM_BR117_		42	26
Dictyostelium_discoideum		24	16
Dictyostelium_purpureum_		25	16
Entamoeba_dispar_1.2		14	8
Entamoeba_invadens_1.2		13	6
Entamoeba_histolytica_1		13	6
Selaginella_moellendorffii_		119	101
Pinus_taeda	(Loblolly pine)	125	104
Picea_abies	(Norway spruce)	247	209
Eucalyptus_grandis_v201	(Rose gum)	131	115
Theobroma_cacao_B97-61/B2_v1	(Cacao)	108	92
Gossypium_raimondii_v221		242	207
Citrus_clementina_v165		140	121
Citrus_sinensis_v154	(Sweet orange)	155	134
Thellungiella_halophila_v173		107	94
Brassica_rapa_Chiifu-401_1.2	(Field mustard)	105	91
Capsella_rubella_v183		110	96
Arabidopsis_lyrata_	(Lyrate rockcress)	97	86
Arabidopsis_thaliana_10	(Thale cress)	114	101
Carica_papaya_	(Papaya)	82	73
Medicago_truncatula_	(Barrel medic)	168	150
Phaseolus_vulgaris_v186	(French bean)	116	99
Glycine_max_v109	(Soybean)	174	150
Cucumis_sativus_v122	(Cucumber)	142	128
Fragaria_vesca_	(Wild strawberry)	86	80
Malus_domestica_v196	(Apple)	159	136
Prunus_persica_v139	(Peach)	113	99
Linum_usitatissimum_v200	(Flax)	139	122
Manihot_esculenta_v147	(Cassava)	99	87
Populus_trichocarpa_v156	(Black cottonwood)	130	116
Vitis_vinifera_	(Wine grape)	89	79
Mimulus_guttatus_v140	(Spotted monkey flower)	102	92
Solanum_lycopersicum_v.2.3	(Tomato)	92	79
Solanum_tuberosum_	(Potato)	179	148
Actinidia_chinensis_Hongyang_		99	92
Aquilegia_coerulea_v195		180	150
Triticum_urartu_22		48	43
Triticum_aestivum_22	(Bread wheat)	151	139
Aegilops_tauschii_22		65	58
Brachypodium_distachyon_	(Stiff brome)	73	60
Oryza_barthii_22	(African wild rice)	98	86
Oryza_meridionalis_22		84	78
Oryza_glumaepatula_22		135	118
Oryza_glaberrima	(African rice)	53	49
Oryza_punctata_22		96	83
Oryza_nivara_22		103	92
Oryza_brachyantha_22	(Malo sina)	68	61
Oryza_sativa_ssp._japonica_5.0	(Japanese rice)	92	84
Oryza_sativa_v193	(Rice)	92	84
Phyllostachys_heterocyclavar._pubescens	(Kikko-chiku)	74	64
Panicum_virgatum_v202	(Switchgrass)	150	141
Setaria_italica_v164	(Foxtail millet)	72	66
Zea_mays_subsp._mays_	(Maize)	83	71
Zea_mays_v181	(Maize)	91	78
Sorghum_bicolor_	(Sorghum)	82	71
Musa_balbisiana	(Balbis banana)	100	87
Musa_acuminata_22	(Wild Malaysian banana)	94	80
Amborella_trichopoda_22		117	101
Physcomitrella_patens		40	30
Coccomyxa_subellipsoidea_sp._C-169_v2		10	5
Asterochloris_sp._Cgr/DA1pho_v1.0		9	4
Chlorella_variabilis_sp._NC64A_		6	5
Chlorella_vulgaris_		11	6
Volvox_carteri_f._nagariensis_		13	9
Volvox_carteri_v199		13	9
Chlamydomonas_reinhardtii_4.0		10	7
Ostreococcus_sp._RCC809_		7	4
Ostreococcus_lucimarinus_CCE9901_		6	3
Ostreococcus_tauri_		7	5
Bathycoccus_prasinos_		10	7
Micromonas_sp._RCC299_		14	9
Micromonas_pusilla_CCMP1545_v3.0		113	95
Cyanidioschyzon_merolae_strain_10D_22		5	2
Cyanidioschyzon_merolae		5	2
Porphyridium_purpureum_02_2012		70	36
Thecamonas_trahens_ATCC_50062_		9	5
Bigelowiella_natans_CCMP2755_22		110	67
Giardia_lamblia_2.3		2	2
Cyanophora_paradoxa_		24	21
Leishmania_mexicana_2.4		12	8
Leishmania_major_strain_Friedlin_		12	8
Leishmania_infantum_JPCM5_2.4		8	6
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4		10	7
Trypanosoma_vivax_		9	6
Trypanosoma_cruzi_strain_CL_Brener		8	5
Trypanosoma_congolense_2.4		13	7
Trypanosoma_brucei_gambiense_v4.1		8	5
Trypanosoma_brucei_TREU927_v4.1		8	5
Ectocarpus_siliculosus		23	13
Aureococcus_anophagefferens_		208	132
Albugo_laibachii_22		18	9
Pythium_iwayamai_DAOM_BR242034_22		26	15
Pythium_arrhenomanes_ATCC_12531_22		27	14
Pythium_ultimum_v1.7-2		24	12
Pythium_aphanidermatum_DAOM_BR444_22		26	11
Pythium_irregulare_DAOM_BR486_22		26	13
Pythium_vexans_DAOM_BR484_22		23	13
Phytophthora_ramorum_1.1	(Sudden oak death agent)	23	14
Phytophthora_sojae_1.1		19	11
Phytophthora_infestans_T30-4_		27	15
Phytophthora_capsici_		23	13
Hyaloperonospora_arabidopsidis_22		15	8
Phaeodactylum_tricornutumCCAP_1055/1		10	7
Fragilariopsis_cylindrus		39	34
Thalassiosira_pseudonana_CCMP1335		12	10
Perkinsus_marinus_ATCC_50983_		7	5
Paramecium_tetraurelia_		47	33
Tetrahymena_thermophila_SB210_1_		76	69
Ichthyophthirius_multifiliis_strain_G5_		13	9
Cryptosporidium_hominis		4	2
Cryptosporidium_muris		4	3
Cryptosporidium_parvum_Iowa_II		6	2
Neospora_caninum		10	4
Toxoplasma_gondii_VEG		8	4
Toxoplasma_gondii_ME49		8	4
Toxoplasma_gondii_GT1		9	4
Babesia_bovis_T2Bo_		10	6
Theileria_parva__		3	2
Theileria_annulata		4	2
Plasmodium_falciparum_3D7_		11	4
Plasmodium_vivax_SaI-1_7.0		9	3
Plasmodium_knowlesi_strain_H_		10	3
Plasmodium_yoelii_ssp._yoelii_1_		7	3
Plasmodium_chabaudi_		10	4
Plasmodium_berghei_ANKA_		10	3
Symbiodinium_minutum_clade_B1_v1.2		89	71
Naegleria_gruberi_		130	83
Trichomonas_vaginalis_		144	72
Guillardia_theta_CCMP2712_v1.0_		78	49
Emiliania_huxleyi_CCMP1516_		52	42
Leptolyngbya_sp._PCC_7376		2	2
Pseudanabaena_sp._PCC_7367		2	2
Acaryochloris_marina_MBIC11017		2	2
Thermosynechococcus_sp._NK55		1	1
Microcoleus_sp._PCC_7113		3	3
Trichodesmium_erythraeum_IMS101		3	3
Cyanothece_sp._PCC_8802		1	1
Gloeocapsa_sp._PCC_7428		3	3
Gloeobacter_violaceus_PCC_7421		2	2
Rivularia_sp._PCC_7116		2	2
Calothrix_sp._PCC_7507		2	2
Anabaena_variabilis_ATCC_29413		1	1
'Nostoc_azollae'_0708		2	2
Nostoc_sp._PCC_7107		3	2
Nostoc_punctiforme_PCC_73102		3	3
Nostoc_sp._PCC_7120		1	1
Anabaena_sp._90		3	2
Cryptobacterium_curtum_DSM_15641		1	1
Slackia_heliotrinireducens_DSM_20476		12	5
Atopobium_parvulum_DSM_20469		1	1
Thermobispora_bispora_DSM_43833		1	1
Nakamurella_multipartita_DSM_44233		1	1
Modestobacter_marinus		3	2
Geodermatophilus_obscurus_DSM_43160		2	1
Catenulispora_acidiphila_DSM_44928		3	3
Stackebrandtia_nassauensis_DSM_44728		7	5
Frankia_sp._EAN1pec		1	1
Frankia_alni_ACN14a		3	1
Thermobifida_fusca_YX		3	2
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111		2	1
Thermomonospora_curvata_DSM_43183		2	2
Streptosporangium_roseum_DSM_43021		4	3
Kitasatospora_setae_KM-6054		7	2
Streptomyces_coelicolor_A3(2)		2	1
Streptomyces_sp._PAMC26508		4	2
Streptomyces_flavogriseus_ATCC_33331		7	3
Streptomyces_sp._SirexAA-E		4	1
Streptomyces_griseus_subsp._griseus_NBRC_13350		9	5
Streptomyces_bingchenggensis_BCW-1		7	5
Streptomyces_violaceusniger_Tu_4113		7	3
Streptomyces_avermitilis_MA-4680		6	2
Streptomyces_cattleya_NRRL_8057_=_DSM_46488		3	1
Streptomyces_scabiei_87.22		4	2
Streptomyces_hygroscopicus_subsp._jinggangensis_5008		5	2
Pseudonocardia_dioxanivorans_CB1190		1	1
Saccharopolyspora_erythraea_NRRL_2338		1	1
Amycolatopsis_mediterranei_U32		2	1
Propionibacterium_propionicum_F0230a		1	1
Propionibacterium_freudenreichii_subsp._shermanii_CIRM-BIA1		1	1
Actinoplanes_sp._N902-109		3	3
Actinoplanes_sp._SE50/110		4	2
Actinoplanes_missouriensis_431		1	1
Nocardia_cyriacigeorgica_GUH-2		1	1
Nocardia_farcinica_IFM_10152		1	1
Mycobacterium_avium_104		1	1
Sanguibacter_keddieii_DSM_10542		1	1
Brachybacterium_faecium_DSM_4810		1	1
Cellulomonas_flavigena_DSM_20109		2	1
Rothia_dentocariosa_ATCC_17931		1	1
Bifidobacterium_animalis_subsp._lactis_Bl-04		1	1
Bifidobacterium_bifidum_S17		1	1
Anaerolinea_thermophila_UNI-1		1	1
Herpetosiphon_aurantiacus_DSM_785		2	2
Roseiflexus_sp._RS-1		4	3
Roseiflexus_castenholzii_DSM_13941		1	1
Chloroflexus_sp._MS-G		2	2
Chloroflexus_sp._Y-400-fl		1	1
Chloroflexus_aggregans_DSM_9485		1	1
Chloroflexus_aurantiacus_J-10-fl		1	1
Deinococcus_gobiensis_I-0		1	1
Deinococcus_geothermalis_DSM_11300		1	1
Deinococcus_radiodurans_R1		2	2
Oceanithermus_profundus_DSM_14977		2	2
Marinithermus_hydrothermalis_DSM_14884		1	1
Thermus_sp._CCB_US3_UF1		1	1
Thermus_scotoductus_SA-01		2	2
Finegoldia_magna_ATCC_29328		1	1
Veillonella_parvula_DSM_2008		1	1
Megasphaera_elsdenii_DSM_20460		4	3
Acidaminococcus_intestini_RyC-MR95		1	1
Acidaminococcus_fermentans_DSM_20731		3	2
Megamonas_hypermegale		1	1
Selenomonas_sputigena_ATCC_35185		4	3
Selenomonas_ruminantium_subsp._lactilytica_TAM6421		12	7
Natranaerobius_thermophilus_JW/NM-WN-LF		1	1
Eubacterium_siraeum		2	2
Clostridium_cellulolyticum_H10		2	2
Clostridium_thermocellum_ATCC_27405		2	2
Ethanoligenens_harbinense_YUAN-3		6	1
Faecalibacterium_prausnitzii		4	2
Ruminococcus_bromii		1	1
Ruminococcus_albus_7		3	1
Oscillibacter_valericigenes_Sjm18-20		16	6
butyrate-producing_bacterium_SS3/4		2	1
Candidatus_Desulforudis_audaxviator_MP104C		1	1
Desulfosporosinus_acidiphilus_SJ4		1	1
Dehalobacter_sp._DCA		4	3
Dehalobacter_sp._CF		4	3
Syntrophobotulus_glycolicus_DSM_8271		5	3
Desulfitobacterium_hafniense_Y51		7	3
Desulfitobacterium_dehalogenans_ATCC_51507		4	1
Desulfotomaculum_reducens_MI-1		2	2
Desulfotomaculum_acetoxidans_DSM_771		3	2
Desulfotomaculum_kuznetsovii_DSM_6115		1	1
Acetobacterium_woodii_DSM_1030		5	2
Eubacterium_eligens_ATCC_27750		2	2
Eubacterium_limosum_KIST612		2	2
Clostridium_difficile_630		4	2
Clostridium_saccharolyticum_WM1		6	2
Clostridium_phytofermentans_ISDg		5	4
Clostridium_lentocellum_DSM_5427		1	1
[Ruminococcus]_torques		1	1
Eubacterium_rectale_M104/1		2	2
Eubacterium_rectale_ATCC_33656		2	2
Coprococcus_sp._ART55/1		5	3
Roseburia_hominis_A2-183		2	2
Roseburia_intestinalis		1	1
Butyrivibrio_proteoclasticus_B316		3	3
Butyrivibrio_fibrisolvens		4	2
Syntrophothermus_lipocalidus_DSM_12680		2	2
Heliobacterium_modesticaldum_Ice1		4	3
Alkaliphilus_oremlandii_OhILAs		1	1
Clostridium_sp._BNL1100		9	4
Clostridium_kluyveri_DSM_555		4	1
Clostridium_beijerinckii_NCIMB_8052		2	2
Clostridium_tetani_E88		2	2
Clostridium_perfringens_ATCC_13124		1	1
Clostridium_cellulovorans_743B		6	5
Clostridium_botulinum_A_str._ATCC_3502		1	1
Clostridium_acetobutylicum_ATCC_824		2	2
Mahella_australiensis_50-1_BON		1	1
Thermodesulfobium_narugense_DSM_14796		3	3
Carboxydothermus_hydrogenoformans_Z-2901		1	1
Halothermothrix_orenii_H_168		2	2
Enterococcus_hirae_ATCC_9790		1	1
Enterococcus_faecium_Aus0004		1	1
Enterococcus_faecalis_62		1	1
Oenococcus_oeni_PSU-1		1	1
Leuconostoc_sp._C2		1	1
Leuconostoc_kimchii_IMSNU_11154		1	1
Leuconostoc_gasicomitatum_LMG_18811		1	1
Lactobacillus_crispatus_ST1		2	2
Lactobacillus_salivarius_CECT_5713		1	1
Lactobacillus_ruminis_ATCC_27782		1	1
Lactobacillus_fermentum_IFO_3956		1	1
Lactobacillus_delbrueckii_subsp._bulgaricus_ATCC_BAA-365		1	1
Lactococcus_garvieae_ATCC_49156		1	1
Lactococcus_lactis_subsp._cremoris_MG1363		1	1
Streptococcus_gallolyticus_UCN34		5	2
Streptococcus_infantarius_subsp._infantarius_CJ18		1	1
Streptococcus_agalactiae_A909		1	1
Streptococcus_oralis_Uo5		1	1
Exiguobacterium_sibiricum_255-15		1	1
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_DSM_446		1	1
Brevibacillus_brevis_NBRC_100599		1	1
Paenibacillus_sp._JDR-2		1	1
Paenibacillus_terrae_HPL-003		1	1
Paenibacillus_mucilaginosus_3016		3	3
Bacillus_selenitireducens_MLS10		2	2
Listeria_innocua_Clip11262		1	1
Solibacillus_silvestris_StLB046		3	2
Lysinibacillus_sphaericus_C3-41		6	3
Oceanobacillus_iheyensis_HTE831		1	1
Anoxybacillus_flavithermus_WK1		1	1
Geobacillus_sp._WCH70		1	1
Bacillus_sp._1NLA3E		3	2
Bacillus_amyloliquefaciens_FZB42		1	1
Bacillus_atrophaeus_1942		1	1
Bacillus_licheniformis_DSM_13_=_ATCC_14580		1	1
Bacillus_weihenstephanensis_KBAB4		1	1
Bacillus_thuringiensis_str._Al_Hakam		1	1
Bacillus_clausii_KSM-K16		1	1
Bacillus_cellulosilyticus_DSM_2522		1	1
Bacillus_pumilus_SAFR-032		1	1
Bacillus_megaterium_DSM_319		1	1
Bacillus_coagulans_2-6		1	1
Staphylococcus_pseudintermedius_HKU10-03		1	1
Staphylococcus_lugdunensis_HKU09-01		1	1
Staphylococcus_haemolyticus_JCSC1435		1	1
Candidatus_Cloacamonas_acidaminovorans		3	3
Melioribacter_roseus_P3M		6	5
Ignavibacterium_album_JCM_16511		9	6
Pelodictyon_phaeoclathratiforme_BU-1		4	4
Chlorobium_luteolum_DSM_273		3	2
Chlorobium_chlorochromatii_CaD3		4	2
Chlorobium_phaeobacteroides_DSM_266		1	1
Chlorobium_phaeovibrioides_DSM_265		2	1
Chlorobium_limicola_DSM_245		3	1
Chlorobaculum_parvum_NCIB_8327		5	2
Chlorobium_tepidum_TLS		2	2
Chloroherpeton_thalassium_ATCC_35110		5	3
Haliscomenobacter_hydrossis_DSM_1100		6	6
Saprospira_grandis_str._Lewin		3	3
Niastella_koreensis_GR20-10		6	5
Chitinophaga_pinensis_DSM_2588		7	7
Salinibacter_ruber_M8		1	1
Flexibacter_litoralis_DSM_6794		10	8
Candidatus_Amoebophilus_asiaticus_5a2		103	45
Belliella_baltica_DSM_15883		1	1
Cyclobacterium_marinum_DSM_745		3	3
Marivirga_tractuosa_DSM_4126		3	3
Fibrella_aestuarina		3	3
Dyadobacter_fermentans_DSM_18053		4	4
Cytophaga_hutchinsonii_ATCC_33406		2	2
Spirosoma_linguale_DSM_74		7	7
Runella_slithyformis_DSM_19594		5	5
Parabacteroides_distasonis_ATCC_8503		2	2
Paludibacter_propionicigenes_WB4		6	6
Odoribacter_splanchnicus_DSM_20712		1	1
Bacteroides_sp._CF50		7	5
Prevotella_ruminicola_23		4	3
Porphyromonas_asaccharolytica_DSM_20707		2	2
Porphyromonas_gingivalis_ATCC_33277		2	2
Alistipes_finegoldii_DSM_17242		1	1
Bacteroides_salanitronis_DSM_18170		2	2
Bacteroides_helcogenes_P_36-108		4	4
Bacteroides_vulgatus_ATCC_8482		7	6
Bacteroides_thetaiotaomicron_VPI-5482		7	7
Bacteroides_fragilis_YCH46		6	3
Pedobacter_saltans_DSM_12145		3	2
Solitalea_canadensis_DSM_3403		7	6
Sphingobacterium_sp._21		7	4
Fluviicola_taffensis_DSM_16823		2	2
Owenweeksia_hongkongensis_DSM_17368		2	2
Zunongwangia_profunda_SM-A87		1	1
Krokinobacter_sp._4H-3-7-5		2	2
Gramella_forsetii_KT0803		3	3
Lacinutrix_sp._5H-3-7-4		8	8
Maribacter_sp._HTCC2170		2	2
Robiginitalea_biformata_HTCC2501		1	1
Croceibacter_atlanticus_HTCC2559		3	3
Aequorivita_sublithincola_DSM_14238		8	7
Zobellia_galactanivorans		1	1
Muricauda_ruestringensis_DSM_13258		3	3
Cellulophaga_algicola_DSM_14237		2	2
Cellulophaga_lytica_DSM_7489		2	2
Flavobacteriaceae_bacterium_3519-10		2	1
Polaribacter_sp._MED152		2	2
Ornithobacterium_rhinotracheale_DSM_15997		2	2
Capnocytophaga_canimorsus_Cc5		8	5
Capnocytophaga_ochracea_DSM_7271		10	5
Weeksella_virosa_DSM_16922		2	2
Flavobacterium_indicum_GPTSA100-9		3	3
Flavobacterium_psychrophilum_JIP02/86		2	2
Flavobacterium_branchiophilum_FL-15		5	4
Flavobacterium_columnare_ATCC_49512		5	4
Flavobacterium_johnsoniae_UW101		3	3
Blattabacterium_sp._(Nauphoeta_cinerea)		1	1
Fibrobacter_succinogenes_subsp._succinogenes_S85		1	1
Waddlia_chondrophila_WSU_86-1044		4	1
Candidatus_Protochlamydia_amoebophila_UWE25		17	12
Parachlamydia_acanthamoebae_UV-7		14	5
Simkania_negevensis_Z		2	2
Chlamydophila_pecorum_E58		1	1
Chlamydophila_pneumoniae_TW-183		1	1
Chlamydophila_felis_Fe/C-56		1	1
Chlamydophila_abortus_S26/3		1	1
Chlamydia_psittaci_01DC11		1	1
Chlamydia_trachomatis_B/Jali20/OT		1	1
Isosphaera_pallida_ATCC_43644		1	1
Planctomyces_brasiliensis_DSM_5305		1	1
Planctomyces_limnophilus_DSM_3776		2	1
Rhodopirellula_baltica_SH_1		3	1
Pirellula_staleyi_DSM_6068		2	2
Methylacidiphilum_infernorum_V4		6	2
Coraliomargarita_akajimensis_DSM_45221		4	3
Opitutus_terrae_PB90-1		5	5
Akkermansia_muciniphila_ATCC_BAA-835		15	9
Fretibacterium_fastidiosum		9	5
Thermovirga_lienii_DSM_17291		1	1
Anaerobaculum_mobile_DSM_13181		1	1
Turneriella_parva_DSM_21527		3	3
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._L550		8	8
Leptospira_interrogans_serovar_Lai_str._IPAV		12	11
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)'		4	4
Brachyspira_murdochii_DSM_12563		4	4
Brachyspira_intermedia_PWS/A		9	9
Brachyspira_pilosicoli_95/1000		7	7
Brachyspira_hyodysenteriae_WA1		7	7
Borrelia_garinii_PBi		2	2
Borrelia_bissettii_DN127		2	2
Borrelia_afzelii_PKo		4	4
Borrelia_burgdorferi_B31		1	1
Borrelia_recurrentis_A1		2	2
Borrelia_duttonii_Ly		1	1
Borrelia_crocidurae_str._Achema		1	1
Borrelia_turicatae_91E135		1	1
Borrelia_hermsii_DAH		3	3
Spirochaeta_smaragdinae_DSM_11293		2	2
Sphaerochaeta_pleomorpha_str._Grapes		1	1
Sphaerochaeta_globus_str._Buddy		1	1
Spirochaeta_caldaria_DSM_7334		1	1
Treponema_azotonutricium_ZAS-9		4	4
Treponema_primitia_ZAS-2		6	5
Treponema_brennaborense_DSM_12168		3	3
Treponema_paraluiscuniculi_Cuniculi_A		1	1
Treponema_succinifaciens_DSM_2489		6	6
Treponema_denticola_ATCC_35405		4	3
Spirochaeta_africana_DSM_8902		1	1
Spirochaeta_thermophila_DSM_6192		2	2
Desulfurispirillum_indicum_S5		4	3
Calditerrivibrio_nitroreducens_DSM_19672		1	1
Denitrovibrio_acetiphilus_DSM_12809		1	1
Deferribacter_desulfuricans_SSM1		4	4
Flexistipes_sinusarabici_DSM_4947		4	3
Petrotoga_mobilis_SJ95		1	1
Kosmotoga_olearia_TBF_19.5.1		3	3
Fervidobacterium_pennivorans_DSM_9078		2	2
Thermosipho_melanesiensis_BI429		2	2
Thermosipho_africanus_TCF52B		2	2
Thermotoga_lettingae_TMO		1	1
Thermovibrio_ammonificans_HB-1		4	2
Sulfurihydrogenibium_sp._YO3AOP1		2	2
Sulfurihydrogenibium_azorense_Az-Fu1		2	2
Persephonella_marina_EX-H1		3	3
Hydrogenobaculum_sp._SN		1	1
Hydrogenobaculum_sp._HO		1	1
Hydrogenobaculum_sp._Y04AAS1		4	3
Thermocrinis_albus_DSM_14484		2	2
Hydrogenobacter_thermophilus_TK-6		1	1
Elusimicrobium_minutum_Pei191		7	5
Candidatus_Solibacter_usitatus_Ellin6076		6	5
Granulicella_tundricola_MP5ACTX9		4	3
Candidatus_Koribacter_versatilis_Ellin345		5	4
Terriglobus_saanensis_SP1PR4		4	2
Terriglobus_roseus_DSM_18391		3	3
Acidobacterium_capsulatum_ATCC_51196		2	2
Thermodesulfovibrio_yellowstonii_DSM_11347		3	3
Candidatus_Nitrospira_defluvii		5	5
Leptospirillum_ferrooxidans_C2-3		5	4
Streptobacillus_moniliformis_DSM_12112		2	2
Sebaldella_termitidis_ATCC_33386		33	23
Leptotrichia_buccalis_C-1013-b		36	23
Ilyobacter_polytropus_DSM_2926		1	1
Fusobacterium_nucleatum_subsp._nucleatum_ATCC_25586		3	3
Candidatus_Methylomirabilis_oxyfera		4	3
Acidithiobacillus_ferrivorans_SS3		5	5
Acidithiobacillus_caldus_SM-1		7	7
Acidithiobacillus_ferrooxidans_ATCC_53993		8	7
Bacteriovorax_marinus_SJ		3	2
Bdellovibrio_bacteriovorus_HD100		3	3
Nautilia_profundicola_AmH		2	2
Nitratifractor_salsuginis_DSM_16511		4	4
Sulfurospirillum_deleyianum_DSM_6946		6	5
Sulfurospirillum_barnesii_SES-3		7	5
Arcobacter_sp._L		8	7
Arcobacter_nitrofigilis_DSM_7299		8	6
Arcobacter_butzleri_RM4018		7	7
Campylobacter_hominis_ATCC_BAA-381		3	3
Campylobacter_lari_RM2100		2	2
Campylobacter_curvus_525.92		9	9
Campylobacter_concisus_13826		12	10
Campylobacter_jejuni_subsp._doylei_269.97		1	1
Campylobacter_sp._03-427		3	3
Campylobacter_fetus_subsp._fetus_82-40		2	2
uncultured_Sulfuricurvum_sp._RIFRC-1		7	7
Sulfuricurvum_kujiense_DSM_16994		8	8
Sulfurimonas_autotrophica_DSM_16294		3	2
Sulfurimonas_denitrificans_DSM_1251		8	5
Wolinella_succinogenes_DSM_1740		2	1
Helicobacter_cetorum_MIT_00-7128		25	13
Helicobacter_bizzozeronii_CIII-1		31	20
Helicobacter_hepaticus_ATCC_51449		9	6
Helicobacter_mustelae_12198		5	4
Helicobacter_felis_ATCC_49179		48	27
Helicobacter_cinaedi_PAGU611		8	6
Helicobacter_acinonychis_str._Sheeba		10	8
Helicobacter_pylori_B38		13	9
Nitratiruptor_sp._SB155-2		6	4
Sulfurovum_sp._NBC37-1		8	8
Desulfarculus_baarsii_DSM_2075		1	1
Desulfobacca_acetoxidans_DSM_11109		2	1
Syntrophus_aciditrophicus_SB		1	1
Desulfomonile_tiedjei_DSM_6799		3	3
Syntrophobacter_fumaroxidans_MPOB		4	4
Desulfurivibrio_alkaliphilus_AHT2		2	2
Desulfotalea_psychrophila_LSv54		4	2
Desulfobulbus_propionicus_DSM_2032		4	4
Desulfatibacillum_alkenivorans_AK-01		8	6
Desulfobacterium_autotrophicum_HRM2		1	1
Desulfococcus_oleovorans_Hxd3		1	1
Desulfomicrobium_baculatum_DSM_4028		2	2
Desulfovibrio_piezophilus		3	3
Desulfovibrio_magneticus_RS-1		10	7
Desulfovibrio_alaskensis_G20		4	3
Desulfovibrio_vulgaris_subsp._vulgaris_DP4		4	2
Desulfovibrio_salexigens_DSM_2638		9	5
Desulfovibrio_desulfuricans_subsp._desulfuricans_str._ATCC_27774		5	4
Geobacter_daltonii_FRC-32		7	6
Geobacter_sp._M21		2	2
Geobacter_uraniireducens_Rf4		11	6
Geobacter_bemidjiensis_Bem		10	7
Geobacter_sulfurreducens_KN400		3	3
Geobacter_metallireducens_GS-15		2	2
Pelobacter_propionicus_DSM_2379		1	1
Pelobacter_carbinolicus_DSM_2380		4	3
Babela_massiliensis		2	2
Haliangium_ochraceum_DSM_14365		8	6
Sorangium_cellulosum_'So_ce_56'		13	7
Anaeromyxobacter_sp._Fw109-5		5	4
Anaeromyxobacter_dehalogenans_2CP-1		4	2
Stigmatella_aurantiaca_DW4/3-1		3	3
Corallococcus_coralloides_DSM_2259		2	2
Myxococcus_xanthus_DK_1622		3	3
Myxococcus_fulvus_HW-1		6	5
Dechloromonas_aromatica_RCB		5	5
Thauera_sp._MZ1T		5	5
Azoarcus_sp._KH32C		6	6
Azoarcus_sp._BH72		5	5
Aromatoleum_aromaticum_EbN1		7	7
Dechlorosoma_suillum_PS		2	2
Pseudogulbenkiania_sp._NH8B		7	5
Chromobacterium_violaceum_ATCC_12472		4	4
Neisseria_meningitidis_alpha14		5	2
Neisseria_meningitidis_FAM18		9	3
Neisseria_lactamica_020-06		5	2
Neisseria_gonorrhoeae_NCCP11945		4	2
Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1		6	5
beta_proteobacterium_CB		2	2
Methylibium_petroleiphilum_PM1		2	1
Thiomonas_arsenitoxydans		5	3
Thiomonas_intermedia_K12		3	2
Rubrivivax_gelatinosus_IL144		1	1
Leptothrix_cholodnii_SP-6		4	4
Burkholderia_rhizoxinica_HKI_454		1	1
Burkholderia_phytofirmans_PsJN		2	2
Burkholderia_phymatum_STM815		1	1
Burkholderia_xenovorans_LB400		10	7
Ralstonia_eutropha_JMP134		1	1
Cupriavidus_taiwanensis_LMG_19424		1	1
Cupriavidus_metallidurans_CH34		4	4
Cupriavidus_necator_N-1		2	2
Ralstonia_eutropha_H16		1	1
Ralstonia_pickettii_12D		7	7
Ralstonia_solanacearum_CFBP2957		2	2
Polynucleobacter_necessarius_subsp._asymbioticus_QLW-P1DMWA-1		1	1
Burkholderia_sp._RPE64		1	1
Burkholderia_sp._CCGE1002		3	3
Burkholderia_thailandensis_E264		5	5
Burkholderia_pseudomallei_1106a		4	4
Burkholderia_mallei_SAVP1		3	3
Burkholderia_ambifaria_AMMD		6	6
Burkholderia_cenocepacia_HI2424		9	9
Burkholderia_multivorans_ATCC_17616		5	5
Burkholderia_vietnamiensis_G4		8	8
Burkholderia_gladioli_BSR3		7	7
Burkholderia_glumae_BGR1		2	2
Verminephrobacter_eiseniae_EF01-2		2	2
Alicycliphilus_denitrificans_K601		1	1
Ramlibacter_tataouinensis_TTB310		1	1
Delftia_sp._Cs1-4		5	3
Delftia_acidovorans_SPH-1		8	6
Polaromonas_sp._JS666		2	2
Polaromonas_naphthalenivorans_CJ2		5	4
Variovorax_paradoxus_S110		5	5
Rhodoferax_ferrireducens_T118		6	5
Acidovorax_ebreus_TPSY		3	2
Acidovorax_sp._KKS102		1	1
Acidovorax_sp._JS42		3	2
Acidovorax_citrulli_AAC00-1		1	1
Acidovorax_avenae_subsp._avenae_ATCC_19860		3	3
Comamonas_testosteroni_CNB-2		12	6
Collimonas_fungivorans_Ter331		5	4
Herbaspirillum_seropedicae_SmR1		11	8
Taylorella_asinigenitalis_MCE3		14	9
Taylorella_equigenitalis_MCE9		17	12
Bordetella_petrii_DSM_12804		1	1
Bordetella_parapertussis_12822		1	1
Bordetella_bronchiseptica_RB50		1	1
Achromobacter_xylosoxidans_A8		3	3
Achromobacter_xylosoxidans		5	4
Thiobacillus_denitrificans_ATCC_25259		1	1
Nitrosospira_multiformis_ATCC_25196		5	4
Nitrosomonas_sp._Is79A3		5	5
Nitrosomonas_eutropha_C91		3	3
Nitrosomonas_europaea_ATCC_19718		9	7
Sideroxydans_lithotrophicus_ES-1		3	2
Gallionella_capsiferriformans_ES-2		6	5
Methylotenera_versatilis_301		1	1
Methylotenera_mobilis_JLW8		1	1
Methylovorus_sp._MP688		3	3
Methylovorus_glucosetrophus_SIP3-4		3	3
Methylobacillus_flagellatus_KT		3	3
Magnetococcus_marinus_MC-1		36	16
Parvularcula_bermudensis_HTCC2503		6	4
Asticcacaulis_excentricus_CB_48		7	6
Brevundimonas_subvibrioides_ATCC_15264		2	2
Caulobacter_sp._K31		2	2
Caulobacter_crescentus_NA1000		4	3
Phenylobacterium_zucineum_HLK1		2	2
Erythrobacter_litoralis_HTCC2594		2	2
Sphingopyxis_alaskensis_RB2256		3	3
Novosphingobium_sp._PP1Y		2	2
Novosphingobium_aromaticivorans_DSM_12444		2	2
Sphingobium_sp._SYK-6		3	3
Sphingobium_japonicum_UT26S		3	3
Sphingobium_chlorophenolicum_L-1		3	3
Sphingomonas_sp._MM-1		3	3
Sphingomonas_wittichii_RW1		3	3
Zymomonas_mobilis_subsp._mobilis_NCIMB_11163		26	12
Maricaulis_maris_MCS10		14	9
Hirschia_baltica_ATCC_49814		5	4
Hyphomonas_neptunium_ATCC_15444		9	7
Dinoroseobacter_shibae_DFL_12		3	3
Pseudovibrio_sp._FO-BEG1		19	8
Jannaschia_sp._CCS1		1	1
Ruegeria_sp._TM1040		1	1
Roseobacter_litoralis_Och_149		1	1
Roseobacter_denitrificans_OCh_114		1	1
Rhodobacter_sphaeroides_ATCC_17029		3	2
Rhodobacter_capsulatus_SB_1003		1	1
Paracoccus_denitrificans_PD1222		2	2
Rhodospirillum_photometricum_DSM_122		2	1
Tistrella_mobilis_KA081020-065		3	3
Magnetospirillum_magneticum_AMB-1		10	6
Rhodospirillum_centenum_SW		5	5
Rhodospirillum_rubrum_F11		2	2
Azospirillum_lipoferum_4B		10	7
Azospirillum_sp._B510		7	5
Azospirillum_brasilense_Sp245		7	5
Gluconacetobacter_xylinus_NBRC_3288		4	1
Granulibacter_bethesdensis_CGDNIH1		4	1
Gluconacetobacter_diazotrophicus_PAl_5		5	3
Acidiphilium_multivorum_AIU301		4	2
Acidiphilium_cryptum_JF-5		4	2
Gluconobacter_oxydans_621H		6	3
Acetobacter_pasteurianus_IFO_3283-01		5	3
Polymorphum_gilvum_SL003B-26A1		4	4
Micavibrio_aeruginosavorus_ARL-13		8	6
Candidatus_Puniceispirillum_marinum_IMCC1322		8	7
Ehrlichia_ruminantium_str._Gardel		1	1
Rickettsia_bellii_OSU_85-389		1	1
Rickettsia_canadensis_str._McKiel		1	1
Rickettsia_typhi_str._Wilmington		1	1
Rickettsia_philipii_str._364D		1	1
Rickettsia_heilongjiangensis_054		1	1
Rickettsia_felis_URRWXCal2		1	1
Rickettsia_slovaca_13-B		1	1
Rickettsia_parkeri_str._Portsmouth		1	1
Rickettsia_japonica_YH		1	1
Rickettsia_montanensis_str._OSU_85-930		1	1
Rickettsia_akari_str._Hartford		1	1
Rickettsia_rickettsii_str._'Sheila_Smith'		2	2
Rickettsia_conorii_str._Malish_7		1	1
Starkeya_novella_DSM_506		4	4
Xanthobacter_autotrophicus_Py2		7	7
Azorhizobium_caulinodans_ORS_571		4	4
Methylobacterium_chloromethanicum_CM4		8	6
Methylobacterium_extorquens_AM1		6	4
Methylobacterium_sp._4-46		9	6
Methylobacterium_populi_BJ001		7	6
Methylobacterium_nodulans_ORS_2060		7	6
Methylobacterium_radiotolerans_JCM_2831		12	9
Parvibaculum_lavamentivorans_DS-1		9	8
Ochrobactrum_anthropi_ATCC_49188		4	4
Brucella_microti_CCM_4915		3	3
Brucella_pinnipedialis_B2/94		3	3
Brucella_canis_ATCC_23365		3	3
Brucella_suis_ATCC_23445		3	3
Brucella_melitensis_ATCC_23457		3	3
Brucella_ovis_ATCC_25840		3	3
Brucella_abortus_S19		3	3
Sinorhizobium_fredii_NGR234		7	7
Sinorhizobium_medicae_WSM419		9	7
Sinorhizobium_meliloti_AK83		5	5
Genome_sequence_of_Rhizobium_sp._strain_IRBG74		5	5
Rhizobium_etli_CIAT_652		6	6
Rhizobium_leguminosarum_bv._viciae_3841		5	5
Agrobacterium_tumefaciens_str._C58		5	5
Agrobacterium_radiobacter_K84		13	8
Agrobacterium_sp._H13-3		5	5
Agrobacterium_vitis_S4		7	5
Candidatus_Liberibacter_asiaticus_str._psy62		1	1
Mesorhizobium_sp._BNC1		3	3
Mesorhizobium_opportunistum_WSM2075		7	6
Mesorhizobium_ciceri_biovar_biserrulae_WSM1271		8	7
Mesorhizobium_loti_MAFF303099		11	8
Methylocella_silvestris_BL2		9	8
Beijerinckia_indica_subsp._indica_ATCC_9039		5	5
Pelagibacterium_halotolerans_B2		3	3
Rhodomicrobium_vannielii_ATCC_17100		8	6
Hyphomicrobium_sp._MC1		9	7
Hyphomicrobium_denitrificans_ATCC_51888		5	4
Oligotropha_carboxidovorans_OM4		4	4
Rhodopseudomonas_palustris_BisA53		6	6
Nitrobacter_winogradskyi_Nb-255		6	4
Nitrobacter_hamburgensis_X14		8	5
Bradyrhizobium_japonicum_USDA_110		7	7
Bradyrhizobium_sp._ORS_278		13	10
Methylocystis_sp._SC2		6	5
Bartonella_tribocorum_CIP_105476		3	2
Bartonella_clarridgeiae_73		2	1
Bartonella_henselae_str._Houston-1		3	2
Bartonella_grahamii_as4aup		3	2
Bartonella_quintana_str._Toulouse		1	1
Bartonella_bacilliformis_KC583		2	1
Saccharophagus_degradans_2-40		5	5
Teredinibacter_turnerae_T7901		5	4
Cellvibrio_japonicus_Ueda107		2	2
Aggregatibacter_aphrophilus_NJ8700		10	7
Aggregatibacter_actinomycetemcomitans_D7S-1		8	8
Haemophilus_somnus_129PT		6	5
Gallibacterium_anatis_UMN179		1	1
Pasteurella_multocida_subsp._multocida_str._3480		2	2
Haemophilus_parasuis_SH0165		2	2
Haemophilus_parainfluenzae_T3T1		13	6
Haemophilus_influenzae_PittEE		5	4
Actinobacillus_succinogenes_130Z		1	1
Oceanimonas_sp._GK1		4	4
Tolumonas_auensis_DSM_9187		3	3
Aeromonas_veronii_B565		4	4
Aeromonas_salmonicida_subsp._salmonicida_A449		4	3
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966		7	6
Aliivibrio_salmonicida_LFI1238		5	5
Vibrio_fischeri_MJ11		5	5
Vibrio_sp._Ex25		5	5
Vibrio_harveyi_ATCC_BAA-1116		6	5
Vibrio_parahaemolyticus_RIMD_2210633		5	5
Vibrio_splendidus_LGP32		6	6
Vibrio_anguillarum_775		7	7
Vibrio_furnissii_NCTC_11218		6	6
Vibrio_vulnificus_MO6-24/O		4	4
Vibrio_cholerae_O395		6	6
Photobacterium_profundum_SS9		4	4
Psychromonas_ingrahamii_37		8	5
Psychromonas_sp._CNPT3		5	5
Idiomarina_loihiensis_L2TR		3	3
Ferrimonas_balearica_DSM_9799		5	5
Shewanella_piezotolerans_WP3		6	6
Shewanella_loihica_PV-4		18	12
Shewanella_halifaxensis_HAW-EB4		6	6
Shewanella_sediminis_HAW-EB3		9	9
Shewanella_denitrificans_OS217		6	6
Shewanella_pealeana_ATCC_700345		7	6
Shewanella_oneidensis_MR-1		8	6
Shewanella_baltica_OS185		8	6
Shewanella_woodyi_ATCC_51908		8	7
Shewanella_sp._MR-4		8	6
Shewanella_amazonensis_SB2B		4	4
Shewanella_violacea_DSS12		2	2
Shewanella_frigidimarina_NCIMB_400		7	7
Shewanella_putrefaciens_CN-32		7	6
Colwellia_psychrerythraea_34H		12	12
Pseudoalteromonas_sp._SM9913		8	8
Pseudoalteromonas_atlantica_T6c		6	6
Pseudoalteromonas_haloplanktis_TAC125		4	4
Glaciecola_sp._4H-3-7+YE-5		5	5
Glaciecola_nitratireducens_FR1064		6	6
Marinobacter_adhaerens_HP15		2	2
Marinobacter_sp._BSs20148		2	2
Marinobacter_hydrocarbonoclasticus_ATCC_49840		4	1
Marinobacter_aquaeolei_VT8		1	1
Alteromonas_sp._SN2		6	6
Alteromonas_macleodii_str._'Deep_ecotype'		5	5
Kangiella_koreensis_DSM_16069		5	4
Hahella_chejuensis_KCTC_2396		8	7
Alcanivorax_borkumensis_SK2		2	1
Marinomonas_posidonica_IVIA-Po-181		1	1
Marinomonas_sp._MWYL1		6	3
Marinomonas_mediterranea_MMB-1		2	2
Chromohalobacter_salexigens_DSM_3043		3	2
Halomonas_elongata_DSM_2581		3	3
Methylomicrobium_alcaliphilum		9	8
Methylomonas_methanica_MC09		11	7
Methylococcus_capsulatus_str._Bath		5	3
Dichelobacter_nodosus_VCS1703A		1	1
Rhodanobacter_denitrificans		4	4
Frateuria_aurantia_DSM_6220		4	4
Pseudoxanthomonas_spadix_BD-a59		1	1
Pseudoxanthomonas_suwonensis_11-1		3	3
Stenotrophomonas_maltophilia_K279a		5	5
Xylella_fastidiosa_M23		1	1
Xanthomonas_axonopodis_pv._citri_str._306		4	4
Xanthomonas_albilineans_GPE_PC73		2	2
Xanthomonas_oryzae_pv._oryzae_PXO99A		1	1
Xanthomonas_campestris_pv._campestris_str._B100		3	3
Halothiobacillus_neapolitanus_c2		1	1
Alkalilimnicola_ehrlichii_MLHE-1		9	7
Thioalkalivibrio_sulfidophilus_HL-EbGr7		5	4
Thioalkalivibrio_sp._K90mix		5	5
Halorhodospira_halophila_SL1		2	2
Allochromatium_vinosum_DSM_180		3	3
Thiocystis_violascens_DSM_198		7	7
Nitrosococcus_watsonii_C-113		3	3
Nitrosococcus_halophilus_Nc4		7	7
Nitrosococcus_oceani_ATCC_19707		3	3
Coxiella_burnetii_Dugway_5J108-111		13	9
Legionella_longbeachae_NSW150		14	7
Legionella_pneumophila_str._Corby		22	10
gamma_proteobacterium_HdN1		4	3
Candidatus_Ruthia_magnifica_str._Cm_(Calyptogena_magnifica)		3	2
Candidatus_Vesicomyosocius_okutanii_HA		4	2
Photorhabdus_luminescens_subsp._laumondii_TTO1		2	2
Xenorhabdus_bovienii_SS-2004		3	2
Xenorhabdus_nematophila_ATCC_19061		2	2
Providencia_stuartii_MRSN_2154		18	11
Proteus_mirabilis_HI4320		5	4
Rahnella_sp._Y9602		2	2
Rahnella_aquatilis_CIP_78.65_=_ATCC_33071		1	1
Yersinia_pseudotuberculosis_IP_31758		2	2
Yersinia_pestis_Pestoides_F		2	2
Dickeya_zeae_Ech1591		4	2
Pectobacterium_wasabiae_WPP163		8	4
Pectobacterium_sp._SCC3193		7	5
Pectobacterium_atrosepticum_SCRI1043		4	2
Pectobacterium_carotovorum_subsp._carotovorum_PC1		6	3
Sodalis_glossinidius_str._'morsitans'		1	1
Pantoea_sp._At-9b		1	1
Pantoea_vagans_C9-1		1	1
Pantoea_ananatis_LMG_20103		1	1
Erwinia_sp._Ejp617		1	1
Escherichia_blattae_DSM_4481		1	1
Enterobacteriaceae_bacterium_strain_FGI_57		3	2
Shigella_sonnei_Ss046		6	4
Shigella_flexneri_5_str._8401		8	6
Shigella_dysenteriae_Sd197		2	1
Shigella_boydii_CDC_3083-94		2	2
Salmonella_bongori_NCTC_12419		2	1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_C_strain_RKS4594		13	7
Klebsiella_oxytoca_E718		2	1
Klebsiella_variicola_At-22		2	1
Klebsiella_pneumoniae_NTUH-K2044		2	1
Enterobacter_aerogenes_KCTC_2190		2	1
Escherichia_fergusonii_ATCC_35469		9	5
Escherichia_coli_'BL21-Gold(DE3)pLysS_AG'		6	5
Enterobacter_sp._638		2	2
Enterobacter_asburiae_LF7a		1	1
Enterobacter_cloacae_subsp._dissolvens_SDM		1	1
Citrobacter_rodentium_ICC168		1	1
Citrobacter_koseri_ATCC_BAA-895		2	1
Azotobacter_vinelandii_DJ		6	5
Pseudomonas_sp._TKP		5	4
Pseudomonas_sp._UW4		7	6
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421		4	3
Pseudomonas_entomophila_L48		9	7
Pseudomonas_syringae_pv._tomato_str._DC3000		6	5
Pseudomonas_stutzeri_A1501		6	6
Pseudomonas_fulva_12-X		5	5
Pseudomonas_putida_F1		8	7
Pseudomonas_protegens_Pf-5		6	5
Pseudomonas_fluorescens_SBW25		5	4
Pseudomonas_mendocina_ymp		9	7
Pseudomonas_aeruginosa_UCBPP-PA14		15	10
Pseudomonas_sp._VLB120		10	9
Psychrobacter_sp._G		2	2
Psychrobacter_sp._PRwf-1		3	3
Psychrobacter_arcticus_273-4		4	3
Psychrobacter_cryohalolentis_K5		6	5
Moraxella_catarrhalis_RH4		5	4
Acinetobacter_oleivorans_DR1		9	8
Acinetobacter_calcoaceticus_PHEA-2		8	7
Acinetobacter_baumannii_ATCC_17978		6	5
Acinetobacter_sp._ADP1		5	5
Methylophaga_sp._JAM1		2	2
Cycloclasticus_sp._P1		2	2
Thiomicrospira_crunogena_XCL-2		1	1
Thioalkalimicrobium_cyclicum_ALM1		3	2
Francisella_noatunensis_subsp._orientalis_str._Toba_04		4	3
Francisella_sp._TX077308		4	2
Francisella_philomiragia_subsp._philomiragia_ATCC_25017		4	2
Francisella_tularensis_subsp._tularensis_WY96-3418		4	3
Francisella_cf._novicida_3523		5	4
Francisella_novicida_U112		4	3
Sulfolobus_solfataricus_P2		1	1
Methanocella_arvoryzae_MRE50		2	2
Methanocella_conradii_HZ254		1	1
Methanosaeta_concilii_GP6		1	1
Methanosarcina_acetivorans_C2A		2	2
Methanosarcina_mazei_Go1		2	2
Methanospirillum_hungatei_JF-1		2	2
Methanoculleus_bourgensis_MS2		1	1
Pyrococcus_sp._ST04		1	1
Pyrococcus_furiosus_COM1		1	1
Thermoplasmatales_archaeon_BRNA1		28	19
Methanotorris_igneus_Kol_5		1	1
Methanocaldococcus_sp._FS406-22		1	1
methanocaldococcus_infernus_ME		1	1
Methanocaldococcus_jannaschii_DSM_2661		1	1
Methanococcus_aeolicus_Nankai-3		1	1
Methanococcus_voltae_A3		1	1
Methanothermobacter_thermautotrophicus_str._Delta_H		1	1
Methanobrevibacter_smithii_ATCC_35061		1	1
Aciduliprofundum_sp._MAR08-339		1	1