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Domain combinations for DAK1/DegV-like superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a DAK1/DegV-like domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   5 5
Pan_troglodytes_76_2.1.4   (Chimpanzee)   1 1
Gorilla_gorilla_76_3.1   (Western gorilla)   3 3
Pongo_abelii_76_2   (Sumatran orangutan)   1 1
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   2 2
Papio_anubis_76   (Olive baboon)   2 2
Macaca_mulatta_76_1   (Rhesus monkey)   1 1
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   1 1
Otolemur_garnettii_76_3   (Small-eared galago)   1 1
Microcebus_murinus_76_1   (Gray mouse lemur)   1 1
Rattus_norvegicus_76_5.0   (Norway rat)   1 1
Mus_musculus_76_38   (House mouse)   1 1
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   1 1
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   1 1
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   1 1
Cavia_porcellus_76_3   (Domestic guinea pig)   1 1
Oryctolagus_cuniculus_76_2   (Rabbit)   1 1
Ochotona_princeps_76   (American pika)   1 1
Sus_scrofa_76_10.2   (Pig)   1 1
Bos_taurus_76_3.1   (Cattle)   1 1
Ovis_aries_76_3.1   (Sheep)   1 1
Vicugna_pacos_76_1   (Alpaca)   2 1
Tursiops_truncatus_76_1   (Bottlenose dolphin)   1 1
Mustela_putorius_furo_76_1.0   (Domestic ferret)   1 1
Ailuropoda_melanoleuca_76_1   (Giant panda)   1 1
Canis_familiaris_76_3.1   (Dog)   1 1
Felis_catus_76_6.2   (Domestic cat)   1 1
Equus_caballus_76_2   (Horse)   1 1
Myotis_lucifugus_76_2.0   (Little brown bat)   1 1
Pteropus_vampyrus_76_1   (Large flying fox)   1 1
Sorex_araneus_76_1   (European shrew)   1 1
Erinaceus_europaeus_76   (Western European hedgehog)   2 1
Procavia_capensis_76_1   (Cape rock hyrax)   1 1
Loxodonta_africana_76_3   (African savanna elephant)   1 1
Echinops_telfairi_76   (Small Madagascar hedgehog)   1 1
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   1 1
Macropus_eugenii_76_1.0   (Tammar wallaby)   1 1
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   1 1
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   1 1
Ornithorhynchus_anatinus_76_5   (Platypus)   1 1
Saccoglossus_kowalevskii_v3.0 2 2
Petromyzon_marinus_76_7.0   (Sea lamprey)   1 1
Meleagris_gallopavo_76_2   (Turkey)   1 1
Gallus_gallus_76_4   (Chicken)   1 1
Anas_platyrhynchos_76_1.0   (Mallard)   1 1
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   1 1
Ficedula_albicollis_76_1.0   (Collared flycatcher)   1 1
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   2 2
Anolis_carolinensis_76_2.0   (Green anole)   1 1
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   2 2
Latimeria_chalumnae_76_1   (Coelacanth)   2 2
Lepisosteus_oculatus_76   (Spotted gar)   1 1
Gadus_morhua_76_1   (Atlantic cod)   1 1
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   1 1
Takifugu_rubripes_76_4   (Torafugu)   1 1
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   1 1
Oryzias_latipes_76_1   (Japanese medaka)   1 1
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   1 1
Poecilia_formosa_76   (Amazon molly)   1 1
Oreochromis_niloticus_76_1.0   (Nile tilapia)   1 1
Astyanax_mexicanus_76   (Mexican tetra)   1 1
Danio_rerio_76_9   (Zebrafish)   1 1
Oikopleura_dioica 1 1
Ciona_intestinalis_76   (Vase tunicate)   1 1
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   3 3
Adineta_vaga 4 4
Octopus_bimaculoides_280 1 1
Crassostrea_gigas_22   (Pacific oyster)   2 2
Lottia_gigantea_   (Owl limpet)   2 2
Helobdella_robusta_ 1 1
Capitella_sp._I_ 1 1
Danaus_plexippus_OGS1.0   (Monarch butterfly)   1 1
Heliconius_melpomene_   (Postman butterfly)   1 1
Bombyx_mori_   (Domestic silkworm)   2 2
Nasonia_vitripennis_   (Jewel wasp)   2 2
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   5 5
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   1 1
Linepithema_humile_v1.1   (Argentine ant)   1 1
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   1 1
Solenopsis_invicta_v.2.2.3   (Red fire ant)   1 1
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   1 1
Atta_cephalotes_v1.1 1 1
Camponotus_floridanus_v3.3   (Florida carpenter ant)   1 1
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   2 2
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   3 3
Tribolium_castaneum_3.0   (Red flour beetle)   1 1
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   2 2
Acyrthosiphon_pisum_   (Pea aphid)   1 1
Rhodnius_prolixus_22 4 4
Daphnia_pulex_   (Common water flea)   1 1
Strigamia_maritima_22 1 1
Tetranychus_urticae_   (Two-spotted spider mite)   1 1
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   1 1
Onchocerca_volvulus_22 1 1
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   1 1
Caenorhabditis_japonica_ 3 3
Caenorhabditis_brenneri_ 1 1
Caenorhabditis_remanei_ 1 1
Caenorhabditis_elegans_76_235   (Roundworm)   1 1
Caenorhabditis_briggsae_2 1 1
Trichinella_spiralis_22 1 1
Mnemiopsis_leidyi   (Sea walnut)   1 1
Acropora_digitifera_v1.0 1 1
Nematostella_vectensis_1.0   (Starlet sea anemone)   1 1
Hydra_vulgaris 2 2
Amphimedon_queenslandica 3 3
Proterospongia_sp._ATCC_50818_ 1 1
Sphaeroforma_arctica_JP610_ 1 1
Capsaspora_owczarzaki_ATCC_30864_ 1 1
Conidiobolus_coronatus_NRRL28638_v1.0 1 1
Mortierella_verticillata_NRRL_6337_ 1 1
Phycomyces_blakesleeanus_ 1 1
Rhizopus_oryzae_RA_99-880_ 1 1
Mucor_circinelloides_ 1 1
Rhizomucor_miehei_CAU432_ 1 1
Malassezia_globosa_CBS_7966_ 2 2
Sporisorium_reilianum_22 1 1
Ustilago_maydis_ 1 1
Mixia_osmundae_IAM_14324_v1.0 1 1
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 1 1
Melampsora_laricis-populina_ 1 1
Rhodotorula_graminis_WP1_v1.0 1 1
Sporobolomyces_roseus_IAM_13481_ 1 1
Microbotryum_violaceum_22 1 1
Wallemia_sebi_v1.0 2 2
Sphaerobolus_stellatus_v1.0 2 2
Piloderma_croceum_F_1598_v1.0 1 1
Serpula_lacrymans_var._lacrymans_S7.9_ 2 2
Coniophora_puteana 2 2
Hydnomerulius_pinastri_v2.0 2 2
Paxillus_rubicundulus_Ve08.2h10_v1.0 2 2
Pisolithus_microcarpus_441_v1.0 2 2
Pisolithus_tinctorius_Marx_270_v1.0 3 3
Scleroderma_citrinum_Foug_A_v1.0 1 1
Coprinopsis_cinerea_okayama7_130_v3 1 1
Pleurotus_ostreatus_   (Oyster mushroom)   2 2
Amanita_thiersii_Skay4041_v1.0 2 2
Amanita_muscaria_Koide_v1.0   (Fly agaric)   1 1
Galerina_marginata_v1.0 3 3
Hebeloma_cylindrosporum_h7_v2.0 2 2
Laccaria_bicolor_S238N-H82_ 1 1
Agaricus_bisporus_var._bisporus_ 2 2
Schizophyllum_commune_ 2 2
Stereum_hirsutum_FP-91666_SS1__v1.0 3 3
Heterobasidion_annosum_ 2 2
Gloeophyllum_trabeumv1.0 2 2
Punctularia_strigosozonata_v1.0 1 1
Sebacina_vermifera_MAFF_305830_v1.0 1 1
Fomitiporia_mediterranea_v1.0 2 2
Tulasnella_calospora_AL13/4D_v1.0 4 4
Postia_placenta_ 1 1
Wolfiporia_cocos_MD-104_SS10__v1.0 1 1
Fomitopsis_pinicolav1.0 1 1
Fomitopsis_pinicola_FP-58527_SS1_v3.0 1 1
Phanerochaete_chrysosporium_RP-78_2.1 1 1
Dichomitus_squalens 1 1
Trametes_versicolor_v1.0 1 1
Tremella_mesenterica_   (Witches' butter)   2 2
Daldinia_eschscholzii_EC12_v1.0 2 2
Apiospora_montagnei_NRRL_25634_v1.0 3 3
Magnaporthe_poae_ATCC_64411_22 1 1
Magnaporthe_grisea_70-15_ 2 2
Podospora_anserina_ 2 2
Sporotrichum_thermophile_ATCC_42464_ 2 2
Thielavia_terrestris_NRRL_8126_ 3 3
Chaetomium_globosum_CBS_148.51_ 2 2
Neurospora_tetrasperma_ 2 2
Neurospora_discreta_FGSC_8579_ 2 2
Neurospora_crassa_OR74A_ 2 2
Cryphonectria_parasitica_   (Chestnut blight fungus)   3 3
Verticillium_albo-atrum_VaMs.102_ 3 3
Verticillium_dahliae_VdLs.17_ 3 3
Acremonium_alcalophilumv_1.0 2 2
Glomerella_graminicola_22 3 3
Fusarium_graminearum_ 2 2
Nectria_haematococca_mpVI_ 3 3
Fusarium_oxysporum_f._sp._lycopersici_4286_ 4 4
Fusarium_verticillioides_7600_ 2 2
Trichoderma_asperellum_CBS_433.97_v1.0 3 3
Trichoderma_atroviride_ 3 3
Trichoderma_citrinoviride_v1.0 3 3
Trichoderma_reesei_1.2 3 3
Trichoderma_virens_Gv29-8_ 6 6
Trichoderma_longibrachiatum_ATCC_18648_v1.0 3 3
Trichoderma_harzianum_CBS_226.95_v1.0 5 5
Amorphotheca_resinae_v1.0   (Creosote fungus)   2 2
Botrytis_cinerea_B05.10_ 1 1
Sclerotinia_sclerotiorum_ 1 1
Blumeria_graminis_22 1 1
Didymella_exigua_CBS_183.55_v1.0 2 2
Leptosphaeria_maculans_22 2 2
Setosphaeria_turcica_v1.0 2 2
Cochliobolus_miyabeanus_ATCC_44560_v1.0 2 2
Cochliobolus_victoriae_FI3_v1.0 2 2
Cochliobolus_carbonum_26-R-13_v1.0 2 2
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   2 2
Alternaria_brassicicola_ 2 2
Cochliobolus_lunatus_m118_v2.0 2 2
Pyrenophora_teres_f._teres_22 2 2
Pyrenophora_tritici-repentis_ 2 2
Stagonospora_nodorum_ 2 2
Mycosphaerella_graminicola_IPO323_ 3 3
Zasmidium_cellare_ATCC_36951_v1.0 3 3
Dothistroma_septosporum 3 3
Septoria_musiva_v1.0 3 3
Mycosphaerella_fijiensis_CIRAD86_ 2 2
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 3 3
Paracoccidioides_brasiliensis_Pb18_ 1 1
Coccidioides_posadasii_RMSCC_3488_ 1 1
Coccidioides_immitis_RS_ 1 1
Ajellomyces_dermatitidis_SLH14081_ 1 1
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 1 1
Microsporum_canis_CBS_113480_ 1 1
Trichophyton_equinum_CBS_127.97_ 1 1
Trichophyton_verrucosum_HKI_0517_ 1 1
Arthroderma_benhamiae_CBS_112371_ 1 1
Trichophyton_tonsurans_CBS_112818_ 1 1
Trichophyton_rubrum_CBS_118892_ 1 1
Uncinocarpus_reesii_1704_ 1 1
Aspergillus_zonatus_v1.0 2 2
Penicillium_chrysogenum_v1.0 1 1
Aspergillus_acidus_v1.0 1 1
Aspergillus_fumigatus_Af293 1 1
Aspergillus_brasiliensis_v1.0 1 1
Aspergillus_nidulans_FGSC_A4_ 1 1
Aspergillus_sydowii_v1.0 1 1
Aspergillus_versicolor_v1.0 1 1
Aspergillus_glaucus 1 1
Aspergillus_carbonarius_ITEM_5010_ 1 1
Neosartorya_fischeri_NRRL_181_ 1 1
Aspergillus_terreus_NIH2624_ 2 2
Aspergillus_tubingensis_v1.0 1 1
Aspergillus_wentii_v1.0 1 1
Aspergillus_oryzae_RIB40_ 1 1
Aspergillus_niger_22 1 1
Aspergillus_flavus_NRRL3357_ 1 1
Aspergillus_clavatus_NRRL_1_ 1 1
Penicillium_marneffei_ATCC_18224_ 3 3
Tuber_melanosporum_Mel28_22 1 1
Tuber_melanosporum_Vittad_   (Perigord truffle)   1 1
Hansenula_polymorpha_v2.0 2 2
Dekkera_bruxellensis_CBS_2499_v2.0 1 1
Pichia_membranifaciensv1.0 1 1
Candida_tanzawaensis_NRRL_Y-17324__v1.0 1 1
Candida_dubliniensis_CD36_ 1 1
Candida_tropicalis_MYA-3404_ 1 1
Candida_parapsilosis_ 1 1
Candida_albicans_SC5314 2 2
Lodderomyces_elongisporus_NRRL_YB-4239_ 1 1
Babjeviella_inositovora_NRRL_Y-12698_v1.0 1 1
Pichia_stipitis_CBS_6054_ 3 3
Candida_guilliermondii_ATCC_6260_ 1 1
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 2 2
Debaromyces_hansenii 4 4
Wickerhamomyces_anomalus 2 2
Pichia_pastoris_GS115_ 1 1
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 1 1
Yarrowia_lipolytica_CLIB122 3 3
Candida_lusitaniae_ATCC_42720_ 1 1
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 1 1
Vanderwaltozyma_polyspora_DSM_70294_ 1 1
Candida_glabrata_CBS138 1 1
Kluyveromyces_thermotolerans_CBS_6340 2 2
Lachancea_kluyveri_ 1 1
Kluyveromyces_waltii 2 2
Ashbya_gossypii_ATCC_10895_ 1 1
Zygosaccharomyces_rouxii_ 1 1
Saccharomyces_mikatae_MIT 2 2
Saccharomyces_paradoxus_MIT 2 2
Saccharomyces_cerevisiae_76   (Baker's yeast)   2 2
Saccharomyces_bayanus_MIT 2 2
Kluyveromyces_lactis 1 1
Schizosaccharomyces_cryophilus_OY26_22 1 1
Schizosaccharomyces_octosporus_yFS286_ 1 1
Schizosaccharomyces_japonicus_yFS275_ 1 1
Schizosaccharomyces_pombe   (Fission yeast)   2 2
Spizellomyces_punctatus_DAOM_BR117_ 1 1
Dictyostelium_discoideum 1 1
Dictyostelium_purpureum_ 1 1
Selaginella_moellendorffii_ 2 2
Eucalyptus_grandis_v201   (Rose gum)   8 8
Theobroma_cacao_B97-61/B2_v1   (Cacao)   1 1
Gossypium_raimondii_v221 6 6
Citrus_clementina_v165 3 3
Citrus_sinensis_v154   (Sweet orange)   10 10
Thellungiella_halophila_v173 3 3
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   2 2
Capsella_rubella_v183 2 2
Arabidopsis_lyrata_   (Lyrate rockcress)   2 2
Arabidopsis_thaliana_10   (Thale cress)   2 2
Carica_papaya_   (Papaya)   1 1
Medicago_truncatula_   (Barrel medic)   2 2
Phaseolus_vulgaris_v186   (French bean)   1 1
Glycine_max_v109   (Soybean)   3 3
Cucumis_sativus_v122   (Cucumber)   1 1
Fragaria_vesca_   (Wild strawberry)   1 1
Malus_domestica_v196   (Apple)   5 5
Prunus_persica_v139   (Peach)   1 1
Linum_usitatissimum_v200   (Flax)   2 2
Manihot_esculenta_v147   (Cassava)   1 1
Populus_trichocarpa_v156   (Black cottonwood)   4 4
Vitis_vinifera_   (Wine grape)   1 1
Mimulus_guttatus_v140   (Spotted monkey flower)   1 1
Solanum_lycopersicum_v.2.3   (Tomato)   1 1
Solanum_tuberosum_   (Potato)   1 1
Aquilegia_coerulea_v195 13 13
Triticum_urartu_22 2 2
Triticum_aestivum_22   (Bread wheat)   4 4
Aegilops_tauschii_22 2 1
Brachypodium_distachyon_   (Stiff brome)   1 1
Oryza_barthii_22   (African wild rice)   1 1
Oryza_meridionalis_22 1 1
Oryza_glumaepatula_22 2 2
Oryza_glaberrima   (African rice)   1 1
Oryza_punctata_22 1 1
Oryza_nivara_22 1 1
Oryza_brachyantha_22   (Malo sina)   1 1
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   3 3
Oryza_sativa_v193   (Rice)   3 3
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   4 3
Panicum_virgatum_v202   (Switchgrass)   5 5
Setaria_italica_v164   (Foxtail millet)   3 3
Zea_mays_subsp._mays_   (Maize)   2 2
Zea_mays_v181   (Maize)   2 2
Sorghum_bicolor_   (Sorghum)   1 1
Musa_balbisiana   (Balbis banana)   2 2
Musa_acuminata_22   (Wild Malaysian banana)   1 1
Amborella_trichopoda_22 1 1
Physcomitrella_patens 2 2
Coccomyxa_subellipsoidea_sp._C-169_v2 1 1
Asterochloris_sp._Cgr/DA1pho_v1.0 1 1
Chlorella_variabilis_sp._NC64A_ 1 1
Chlorella_vulgaris_ 1 1
Volvox_carteri_f._nagariensis_ 1 1
Volvox_carteri_v199 1 1
Chlamydomonas_reinhardtii_4.0 1 1
Ostreococcus_sp._RCC809_ 1 1
Ostreococcus_lucimarinus_CCE9901_ 1 1
Ostreococcus_tauri_ 1 1
Bathycoccus_prasinos_ 1 1
Micromonas_sp._RCC299_ 1 1
Micromonas_pusilla_CCMP1545_v3.0 1 1
Porphyridium_purpureum_02_2012 1 1
Bigelowiella_natans_CCMP2755_22 1 1
Cyanophora_paradoxa_ 1 1
Leishmania_mexicana_2.4 1 1
Leishmania_major_strain_Friedlin_ 1 1
Leishmania_infantum_JPCM5_2.4 1 1
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 1 1
Trypanosoma_cruzi_strain_CL_Brener 1 1
Ectocarpus_siliculosus 1 1
Aureococcus_anophagefferens_ 1 1
Pythium_iwayamai_DAOM_BR242034_22 1 1
Pythium_arrhenomanes_ATCC_12531_22 1 1
Pythium_ultimum_v1.7-2 1 1
Pythium_aphanidermatum_DAOM_BR444_22 1 1
Pythium_irregulare_DAOM_BR486_22 1 1
Pythium_vexans_DAOM_BR484_22 1 1
Phytophthora_ramorum_1.1   (Sudden oak death agent)   1 1
Phytophthora_sojae_1.1 1 1
Phytophthora_infestans_T30-4_ 1 1
Phytophthora_capsici_ 2 2
Hyaloperonospora_arabidopsidis_22 1 1
Phaeodactylum_tricornutumCCAP_1055/1 1 1
Fragilariopsis_cylindrus 2 2
Thalassiosira_pseudonana_CCMP1335 1 1
Perkinsus_marinus_ATCC_50983_ 2 2
Tetrahymena_thermophila_SB210_1_ 1 1
Ichthyophthirius_multifiliis_strain_G5_ 1 1
Symbiodinium_minutum_clade_B1_v1.2 3 3
Naegleria_gruberi_ 1 1
Emiliania_huxleyi_CCMP1516_ 2 1
Thermobaculum_terrenum_ATCC_BAA-798 2 2
Microcoleus_sp._PCC_7113 1 1
Gloeocapsa_sp._PCC_7428 1 1
Rivularia_sp._PCC_7116 1 1
'Nostoc_azollae'_0708 1 1
Nostoc_sp._PCC_7107 1 1
Nostoc_punctiforme_PCC_73102 1 1
Candidatus_Phytoplasma_mali 2 2
Aster_yellows_witches'-broom_phytoplasma_AYWB 2 2
Onion_yellows_phytoplasma_OY-M 2 2
Mesoplasma_florum_L1 2 2
Ureaplasma_parvum_serovar_3_str._ATCC_27815 2 2
Ureaplasma_urealyticum_serovar_10_str._ATCC_33699 2 2
Mycoplasma_leachii_99/014/6 3 3
Mycoplasma_mycoides_subsp._capri_LC_str._95010 3 3
Mycoplasma_capricolum_subsp._capricolum_ATCC_27343 3 3
Mycoplasma_crocodyli_MP145 3 3
Mycoplasma_conjunctivae_HRC/581 1 1
Mycoplasma_bovis_HB0801 2 2
Mycoplasma_penetrans_HF-2 3 3
Mycoplasma_putrefaciens_KS1 3 3
Mycoplasma_mobile_163K 3 3
Mycoplasma_fermentans_M64 2 2
Mycoplasma_arthritidis_158L3-1 1 1
Mycoplasma_agalactiae_PG2 2 2
Mycoplasma_synoviae_53 2 2
Mycoplasma_pulmonis_UAB_CTIP 2 2
Mycoplasma_pneumoniae_309 2 2
Mycoplasma_hyorhinis_GDL-1 2 2
Mycoplasma_hominis_ATCC_23114 1 1
Mycoplasma_genitalium_G37 2 2
Mycoplasma_gallisepticum_str._F 2 2
Conexibacter_woesei_DSM_14684 4 4
Cryptobacterium_curtum_DSM_15641 4 4
Eggerthella_sp._YY7918 4 4
Eggerthella_lenta_DSM_2243 6 6
Slackia_heliotrinireducens_DSM_20476 5 5
Olsenella_uli_DSM_7084 9 9
Atopobium_parvulum_DSM_20469 4 4
Coriobacterium_glomerans_PW2 4 4
Rubrobacter_xylanophilus_DSM_9941 3 3
Ilumatobacter_coccineus 2 2
Acidimicrobium_ferrooxidans_DSM_10331 2 2
Nakamurella_multipartita_DSM_44233 2 2
Acidothermus_cellulolyticus_11B 1 1
Modestobacter_marinus 2 2
Blastococcus_saxobsidens_DD2 1 1
Geodermatophilus_obscurus_DSM_43160 2 2
Kineococcus_radiotolerans_SRS30216 2 2
Catenulispora_acidiphila_DSM_44928 3 3
Stackebrandtia_nassauensis_DSM_44728 2 2
Thermobifida_fusca_YX 1 1
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 1 1
Streptosporangium_roseum_DSM_43021 2 2
Kitasatospora_setae_KM-6054 2 1
Streptomyces_coelicolor_A3(2) 3 3
Streptomyces_sp._PAMC26508 3 3
Streptomyces_flavogriseus_ATCC_33331 3 3
Streptomyces_sp._SirexAA-E 3 3
Streptomyces_griseus_subsp._griseus_NBRC_13350 3 3
Streptomyces_bingchenggensis_BCW-1 3 3
Streptomyces_violaceusniger_Tu_4113 4 4
Streptomyces_avermitilis_MA-4680 2 2
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 3 3
Streptomyces_scabiei_87.22 2 2
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 2 2
Actinosynnema_mirum_DSM_43827 4 4
Saccharomonospora_viridis_DSM_43017 5 5
Pseudonocardia_dioxanivorans_CB1190 2 2
Saccharopolyspora_erythraea_NRRL_2338 6 6
Amycolatopsis_mediterranei_U32 3 3
Kribbella_flavida_DSM_17836 2 2
Nocardioides_sp._JS614 2 2
Propionibacterium_propionicum_F0230a 2 2
Propionibacterium_acnes_SK137 2 2
Microlunatus_phosphovorus_NM-1 3 3
Propionibacterium_freudenreichii_subsp._shermanii_CIRM-BIA1 2 2
Salinispora_arenicola_CNS-205 1 1
Salinispora_tropica_CNB-440 1 1
Verrucosispora_maris_AB-18-032 2 2
Micromonospora_sp._L5 1 1
Micromonospora_aurantiaca_ATCC_27029 1 1
Actinoplanes_sp._N902-109 2 2
Actinoplanes_sp._SE50/110 2 2
Actinoplanes_missouriensis_431 2 2
Segniliparus_rotundus_DSM_44985 1 1
Tsukamurella_paurometabola_DSM_20162 2 2
Gordonia_sp._KTR9 1 1
Gordonia_polyisoprenivorans_VH2 2 2
Gordonia_bronchialis_DSM_43247 3 3
Rhodococcus_jostii_RHA1 2 2
Rhodococcus_equi_103S 1 1
Rhodococcus_opacus_B4 2 2
Rhodococcus_erythropolis_PR4 3 3
Nocardia_cyriacigeorgica_GUH-2 1 1
Nocardia_farcinica_IFM_10152 1 1
Amycolicicoccus_subflavus_DQS3-9A1 2 2
Mycobacterium_massiliense_str._GO_06 2 2
Mycobacterium_abscessus_ATCC_19977 2 2
Mycobacterium_sp._JLS 3 3
Mycobacterium_intracellulare_ATCC_13950 1 1
Mycobacterium_avium_104 1 1
Mycobacterium_vanbaalenii_PYR-1 1 1
Mycobacterium_canettii_CIPT_140010059 1 1
Mycobacterium_africanum_GM041182 1 1
Mycobacterium_tuberculosis_KZN_1435 1 1
Mycobacterium_tuberculosis 1 1
Mycobacterium_bovis_BCG_str._Pasteur_1173P2 1 1
Mycobacterium_rhodesiae_NBB3 1 1
Mycobacterium_ulcerans_Agy99 1 1
Mycobacterium_gilvum_PYR-GCK 1 1
Mycobacterium_chubuense_NBB4 2 2
Mycobacterium_marinum_M 1 1
Mycobacterium_smegmatis_str._MC2_155 4 4
Corynebacterium_resistens_DSM_45100 1 1
Corynebacterium_aurimucosum_ATCC_700975 2 2
Corynebacterium_kroppenstedtii_DSM_44385 2 2
Corynebacterium_efficiens_YS-314 1 1
Corynebacterium_ulcerans_0102 2 2
Corynebacterium_urealyticum_DSM_7109 1 1
Corynebacterium_jeikeium_K411 1 1
Corynebacterium_variabile_DSM_44702 3 2
Corynebacterium_pseudotuberculosis_316 2 2
Corynebacterium_glutamicum_R 1 1
Corynebacterium_diphtheriae_NCTC_13129 2 2
Sanguibacter_keddieii_DSM_10542 2 2
Kytococcus_sedentarius_DSM_20547 1 1
Beutenbergia_cavernae_DSM_12333 1 1
Leifsonia_xyli_subsp._xyli_str._CTCB07 1 1
Microbacterium_testaceum_StLB037 2 2
Clavibacter_michiganensis_subsp._michiganensis_NCPPB_382 2 2
Jonesia_denitrificans_DSM_20603 2 2
Intrasporangium_calvum_DSM_43043 1 1
Brachybacterium_faecium_DSM_4810 3 3
Isoptericola_variabilis_225 2 2
Xylanimonas_cellulosilytica_DSM_15894 3 3
Cellulomonas_flavigena_DSM_20109 4 3
Cellulomonas_fimi_ATCC_484 2 2
[Cellvibrio]_gilvus_ATCC_13127 3 2
Arthrobacter_phenanthrenivorans_Sphe3 3 3
Arthrobacter_chlorophenolicus_A6 3 3
Arthrobacter_aurescens_TC1 4 4
Arthrobacter_arilaitensis_Re117 1 1
Kocuria_rhizophila_DC2201 1 1
Rothia_mucilaginosa_DY-18 1 1
Rothia_dentocariosa_ATCC_17931 1 1
Arthrobacter_sp._Rue61a 5 5
Arthrobacter_sp._FB24 4 4
Renibacterium_salmoninarum_ATCC_33209 3 3
Micrococcus_luteus_NCTC_2665 1 1
Arcanobacterium_haemolyticum_DSM_20595 1 1
Actinomyces_sp._F0330 2 2
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 6 6
Dehalococcoides_ethenogenes_195 7 7
Dehalococcoides_sp._BAV1 7 7
Dehalogenimonas_lykanthroporepellens_BL-DC-9 4 4
Anaerolinea_thermophila_UNI-1 7 7
Thermomicrobium_roseum_DSM_5159 1 1
Sphaerobacter_thermophilus_DSM_20745 3 3
Herpetosiphon_aurantiacus_DSM_785 3 3
Roseiflexus_sp._RS-1 4 4
Roseiflexus_castenholzii_DSM_13941 4 4
Chloroflexus_sp._MS-G 2 2
Chloroflexus_sp._Y-400-fl 2 2
Chloroflexus_aggregans_DSM_9485 2 2
Chloroflexus_aurantiacus_J-10-fl 2 2
Truepera_radiovictrix_DSM_17093 1 1
Deinococcus_gobiensis_I-0 3 3
Deinococcus_deserti_VCD115 3 3
Deinococcus_maricopensis_DSM_21211 3 3
Deinococcus_geothermalis_DSM_11300 4 4
Deinococcus_proteolyticus_MRP 3 3
Deinococcus_radiodurans_R1 5 5
Oceanithermus_profundus_DSM_14977 2 2
Marinithermus_hydrothermalis_DSM_14884 3 3
Meiothermus_silvanus_DSM_9946 2 2
Meiothermus_ruber_DSM_1279 2 2
Thermus_sp._CCB_US3_UF1 3 3
Thermus_scotoductus_SA-01 3 3
Thermus_thermophilus_HB27 3 3
Anaerococcus_prevotii_DSM_20548 4 4
Finegoldia_magna_ATCC_29328 4 4
Megasphaera_elsdenii_DSM_20460 1 1
Megamonas_hypermegale 2 2
Selenomonas_ruminantium_subsp._lactilytica_TAM6421 2 2
Erysipelothrix_rhusiopathiae_str._Fujisawa 4 4
Natranaerobius_thermophilus_JW/NM-WN-LF 4 4
Symbiobacterium_thermophilum_IAM_14863 3 3
Clostridiales_genomosp._BVAB3_str._UPII9-5 1 1
Eubacterium_siraeum 2 2
Clostridium_cellulolyticum_H10 1 1
Ethanoligenens_harbinense_YUAN-3 1 1
Faecalibacterium_prausnitzii 3 3
Ruminococcus_sp. 4 4
Ruminococcus_bromii 2 2
Ruminococcus_albus_7 2 2
Thermaerobacter_marianensis_DSM_12885 1 1
Sulfobacillus_acidophilus_DSM_10332 1 1
Oscillibacter_valericigenes_Sjm18-20 5 5
butyrate-producing_bacterium_SS3/4 2 2
Candidatus_Desulforudis_audaxviator_MP104C 1 1
Thermincola_potens_JR 2 2
Desulfosporosinus_acidiphilus_SJ4 5 5
Desulfosporosinus_orientis_DSM_765 5 5
Dehalobacter_sp._DCA 6 6
Dehalobacter_sp._CF 5 5
Syntrophobotulus_glycolicus_DSM_8271 5 5
Desulfitobacterium_hafniense_Y51 6 6
Desulfitobacterium_dehalogenans_ATCC_51507 5 5
Desulfotomaculum_reducens_MI-1 1 1
Desulfotomaculum_ruminis_DSM_2154 2 2
Acetobacterium_woodii_DSM_1030 8 8
Eubacterium_eligens_ATCC_27750 6 6
Eubacterium_limosum_KIST612 10 10
Clostridium_difficile_630 3 3
Clostridium_sticklandii_DSM_519 6 6
Filifactor_alocis_ATCC_35896 3 3
Clostridium_saccharolyticum_WM1 5 5
Clostridium_phytofermentans_ISDg 9 9
Clostridium_lentocellum_DSM_5427 6 6
[Ruminococcus]_obeum 4 4
[Ruminococcus]_torques 5 5
Eubacterium_rectale_M104/1 4 4
Eubacterium_rectale_ATCC_33656 7 7
Coprococcus_sp._ART55/1 3 3
Roseburia_hominis_A2-183 5 5
Roseburia_intestinalis 6 6
Butyrivibrio_proteoclasticus_B316 5 5
Butyrivibrio_fibrisolvens 2 2
Syntrophothermus_lipocalidus_DSM_12680 3 3
Syntrophomonas_wolfei_subsp._wolfei_str._Goettingen 4 4
Heliobacterium_modesticaldum_Ice1 1 1
Alkaliphilus_oremlandii_OhILAs 4 4
Alkaliphilus_metalliredigens_QYMF 6 6
Candidatus_Arthromitus_sp._SFB-mouse-Japan 1 1
Clostridium_sp._BNL1100 1 1
Clostridium_novyi_NT 5 5
Clostridium_ljungdahlii_DSM_13528 3 3
Clostridium_kluyveri_DSM_555 5 5
Clostridium_beijerinckii_NCIMB_8052 5 5
Clostridium_tetani_E88 5 5
Clostridium_perfringens_ATCC_13124 5 5
Clostridium_cellulovorans_743B 5 5
Clostridium_botulinum_A_str._ATCC_3502 5 5
Clostridium_acetobutylicum_ATCC_824 4 4
Thermosediminibacter_oceani_DSM_16646 2 2
Caldicellulosiruptor_obsidiansis_OB47 1 1
Caldicellulosiruptor_kronotskyensis_2002 1 1
Caldicellulosiruptor_hydrothermalis_108 1 1
Caldicellulosiruptor_owensensis_OL 1 1
Caldicellulosiruptor_lactoaceticus_6A 1 1
Caldicellulosiruptor_kristjanssonii_177R1B 1 1
Caldicellulosiruptor_saccharolyticus_DSM_8903 1 1
Caldicellulosiruptor_bescii_DSM_6725 1 1
Thermoanaerobacterium_xylanolyticum_LX-11 2 2
Thermoanaerobacterium_thermosaccharolyticum_DSM_571 2 2
Coprothermobacter_proteolyticus_DSM_5265 3 3
Tepidanaerobacter_acetatoxydans_Re1 5 5
Thermoanaerobacter_tengcongensis_MB4 2 2
Carboxydothermus_hydrogenoformans_Z-2901 2 2
Ammonifex_degensii_KC4 1 1
Thermoanaerobacter_mathranii_subsp._mathranii_str._A3 2 2
Thermoanaerobacter_pseudethanolicus_ATCC_33223 2 2
Thermoanaerobacter_sp._X514 3 3
Thermoanaerobacter_italicus_Ab9 2 2
Thermoanaerobacter_wiegelii_Rt8.B1 2 2
Thermoanaerobacter_brockii_subsp._finnii_Ako-1 2 2
Acetohalobium_arabaticum_DSM_5501 1 1
Halothermothrix_orenii_H_168 8 8
Halanaerobium_hydrogeniformans 8 8
Halanaerobium_praevalens_DSM_2228 5 5
Carnobacterium_sp._17-4 7 7
Carnobacterium_sp._WN1359 6 6
Aerococcus_urinae_ACS-120-V-Col10a 3 3
Tetragenococcus_halophilus_NBRC_12172 5 5
Melissococcus_plutonius_DAT561 1 1
Enterococcus_sp._7L76 4 4
Enterococcus_hirae_ATCC_9790 5 5
Enterococcus_faecium_Aus0004 5 5
Enterococcus_faecalis_62 5 5
Weissella_koreensis_KACC_15510 2 2
Oenococcus_oeni_PSU-1 5 5
Leuconostoc_sp._C2 2 2
Leuconostoc_kimchii_IMSNU_11154 2 2
Leuconostoc_citreum_KM20 2 2
Leuconostoc_mesenteroides_subsp._mesenteroides_ATCC_8293 2 2
Leuconostoc_gasicomitatum_LMG_18811 2 2
Lactobacillus_casei_ATCC_334 5 5
Lactobacillus_kefiranofaciens_ZW3 6 6
Lactobacillus_crispatus_ST1 5 5
Lactobacillus_rhamnosus_Lc_705 5 5
Lactobacillus_johnsonii_FI9785 4 4
Lactobacillus_sanfranciscensis_TMW_1.1304 3 3
Lactobacillus_salivarius_CECT_5713 6 6
Lactobacillus_ruminis_ATCC_27782 6 6
Lactobacillus_fermentum_IFO_3956 3 3
Lactobacillus_amylovorus_GRL1118 5 5
Lactobacillus_sakei_subsp._sakei_23K 4 4
Lactobacillus_reuteri_DSM_20016 2 2
Lactobacillus_gasseri_ATCC_33323 4 4
Lactobacillus_plantarum_JDM1 8 8
Lactobacillus_helveticus_DPC_4571 4 4
Lactobacillus_delbrueckii_subsp._bulgaricus_ATCC_BAA-365 4 4
Lactobacillus_buchneri_NRRL_B-30929 6 6
Lactobacillus_buchneri 6 6
Lactobacillus_brevis_ATCC_367 6 6
Lactobacillus_acidophilus_30SC 4 4
Pediococcus_claussenii_ATCC_BAA-344 6 6
Pediococcus_pentosaceus_ATCC_25745 5 5
Lactococcus_garvieae_ATCC_49156 4 4
Lactococcus_lactis_subsp._cremoris_MG1363 5 5
Streptococcus_sp._I-P16 4 4
Streptococcus_sp._I-G2 4 4
Streptococcus_intermedius_JTH08 4 4
Streptococcus_gallolyticus_UCN34 4 4
Streptococcus_pseudopneumoniae_IS7493 5 5
Streptococcus_pasteurianus_ATCC_43144 6 6
Streptococcus_equi_subsp._equi_4047 4 4
Streptococcus_dysgalactiae_subsp._equisimilis_GGS_124 6 6
Streptococcus_infantarius_subsp._infantarius_CJ18 4 4
Streptococcus_macedonicus_ACA-DC_198 4 4
Streptococcus_mitis_B6 5 5
Streptococcus_uberis_0140J 6 6
Streptococcus_parauberis_KCTC_11537 7 7
Streptococcus_parasanguinis_ATCC_15912 4 4
Streptococcus_pyogenes_str._Manfredo 6 6
Streptococcus_pneumoniae_P1031 3 3
Streptococcus_agalactiae_A909 5 5
Streptococcus_mutans_NN2025 3 3
Streptococcus_thermophilus_LMD-9 2 2
Streptococcus_suis_P1/7 6 6
Streptococcus_sanguinis_SK36 5 5
Streptococcus_salivarius_57.I 5 5
Streptococcus_oralis_Uo5 3 3
Streptococcus_gordonii_str._Challis_substr._CH1 4 4
Exiguobacterium_sp._MH3 6 6
Exiguobacterium_sp._AT1b 6 6
Exiguobacterium_sibiricum_255-15 6 6
Kyrpidia_tusciae_DSM_2912 1 1
Brevibacillus_brevis_NBRC_100599 2 2
Paenibacillus_sp._JDR-2 3 3
Paenibacillus_terrae_HPL-003 3 3
Paenibacillus_mucilaginosus_3016 2 2
Paenibacillus_polymyxa_M1 4 4
Bacillus_selenitireducens_MLS10 7 7
Listeria_welshimeri_serovar_6b_str._SLCC5334 6 6
Listeria_innocua_Clip11262 5 5
Listeria_seeligeri_serovar_1/2b_str._SLCC3954 5 5
Listeria_monocytogenes_serotype_4b_str._CLIP_80459 5 5
Listeria_ivanovii_subsp._ivanovii_PAM_55 4 4
Solibacillus_silvestris_StLB046 6 6
Geobacillus_thermoglucosidasius_C56-YS93 2 2
Lysinibacillus_sphaericus_C3-41 4 4
Oceanobacillus_iheyensis_HTE831 4 4
Anoxybacillus_flavithermus_WK1 3 3
Geobacillus_thermoleovorans_CCB_US3_UF5 3 3
Geobacillus_kaustophilus_HTA426 3 3
Geobacillus_sp._GHH01 3 3
Geobacillus_sp._WCH70 4 4
Geobacillus_thermodenitrificans_NG80-2 2 2
Halobacillus_halophilus_DSM_2266 5 5
Bacillus_sp._JS 2 2
Bacillus_sp._1NLA3E 5 5
Bacillus_amyloliquefaciens_FZB42 2 2
Bacillus_atrophaeus_1942 2 2
Bacillus_subtilis_subsp._subtilis_str._168 2 2
Bacillus_licheniformis_DSM_13_=_ATCC_14580 3 3
Bacillus_halodurans_C-125 3 3
Bacillus_weihenstephanensis_KBAB4 6 6
Bacillus_thuringiensis_str._Al_Hakam 6 6
Bacillus_cereus_03BB102 6 6
Bacillus_anthracis_str._A0248 6 6
Bacillus_pseudofirmus_OF4 3 3
Bacillus_clausii_KSM-K16 5 5
Bacillus_cellulosilyticus_DSM_2522 4 4
Bacillus_pumilus_SAFR-032 3 3
Bacillus_megaterium_DSM_319 3 3
Bacillus_coagulans_2-6 3 3
Macrococcus_caseolyticus_JCSC5402 3 3
Staphylococcus_pseudintermedius_HKU10-03 3 3
Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305 4 4
Staphylococcus_lugdunensis_HKU09-01 2 2
Staphylococcus_haemolyticus_JCSC1435 3 3
Staphylococcus_epidermidis_RP62A 4 4
Staphylococcus_carnosus_subsp._carnosus_TM300 4 4
Staphylococcus_aureus_subsp._aureus_JH1 3 3
Staphylococcus_aureus 3 3
Chloroherpeton_thalassium_ATCC_35110 1 1
Chitinophaga_pinensis_DSM_2588 1 1
Parabacteroides_distasonis_ATCC_8503 1 1
Paludibacter_propionicigenes_WB4 1 1
Sphingobacterium_sp._21 1 1
Zunongwangia_profunda_SM-A87 1 1
Thermanaerovibrio_acidaminovorans_DSM_6589 1 1
Anaerobaculum_mobile_DSM_13181 1 1
Brachyspira_murdochii_DSM_12563 1 1
Brachyspira_intermedia_PWS/A 1 1
Brachyspira_hyodysenteriae_WA1 1 1
Spirochaeta_smaragdinae_DSM_11293 2 2
Sphaerochaeta_pleomorpha_str._Grapes 3 3
Treponema_azotonutricium_ZAS-9 2 2
Treponema_denticola_ATCC_35405 1 1
Marinitoga_piezophila_KA3 4 4
Petrotoga_mobilis_SJ95 3 3
Mesotoga_prima_MesG1.Ag.4.2 7 7
Kosmotoga_olearia_TBF_19.5.1 6 6
Fervidobacterium_pennivorans_DSM_9078 4 4
Fervidobacterium_nodosum_Rt17-B1 4 4
Thermosipho_melanesiensis_BI429 2 2
Thermosipho_africanus_TCF52B 2 2
Thermotoga_lettingae_TMO 2 2
Thermotoga_thermarum_DSM_5069 2 2
Thermotoga_sp._RQ2 2 2
Thermotoga_naphthophila_RKU-10 2 2
Thermotoga_petrophila_RKU-1 3 3
Thermotoga_neapolitana_DSM_4359 2 2
Thermotoga_maritima_MSB8 2 2
Dictyoglomus_turgidum_DSM_6724 2 2
Dictyoglomus_thermophilum_H-6-12 2 2
Caldisericum_exile_AZM16c01 5 5
Streptobacillus_moniliformis_DSM_12112 1 1
Sebaldella_termitidis_ATCC_33386 4 4
Leptotrichia_buccalis_C-1013-b 1 1
Ilyobacter_polytropus_DSM_2926 3 3
Fusobacterium_nucleatum_subsp._nucleatum_ATCC_25586 2 2
Acidithiobacillus_caldus_SM-1 1 1
Desulfovibrio_magneticus_RS-1 1 1
Desulfovibrio_alaskensis_G20 2 2
Desulfovibrio_vulgaris_subsp._vulgaris_DP4 2 2
Desulfovibrio_salexigens_DSM_2638 2 2
Sorangium_cellulosum_'So_ce_56' 1 1
Stigmatella_aurantiaca_DW4/3-1 1 1
Corallococcus_coralloides_DSM_2259 1 1
Myxococcus_xanthus_DK_1622 1 1
Myxococcus_fulvus_HW-1 1 1
Dechloromonas_aromatica_RCB 1 1
Dechlorosoma_suillum_PS 1 1
Thiomonas_arsenitoxydans 1 1
Thiomonas_intermedia_K12 1 1
Leptothrix_cholodnii_SP-6 2 2
Burkholderia_phytofirmans_PsJN 2 2
Burkholderia_phymatum_STM815 1 1
Burkholderia_xenovorans_LB400 1 1
Ralstonia_eutropha_JMP134 1 1
Cupriavidus_taiwanensis_LMG_19424 1 1
Cupriavidus_metallidurans_CH34 1 1
Cupriavidus_necator_N-1 1 1
Ralstonia_eutropha_H16 1 1
Ralstonia_pickettii_12D 1 1
Burkholderia_sp._RPE64 2 2
Burkholderia_sp._CCGE1002 2 2
Burkholderia_thailandensis_E264 1 1
Burkholderia_pseudomallei_1106a 2 2
Burkholderia_mallei_SAVP1 1 1
Burkholderia_ambifaria_AMMD 1 1
Burkholderia_cenocepacia_HI2424 1 1
Burkholderia_multivorans_ATCC_17616 1 1
Burkholderia_vietnamiensis_G4 1 1
Burkholderia_gladioli_BSR3 1 1
Burkholderia_glumae_BGR1 1 1
Verminephrobacter_eiseniae_EF01-2 1 1
Delftia_sp._Cs1-4 1 1
Delftia_acidovorans_SPH-1 1 1
Polaromonas_sp._JS666 3 3
Nitrosospira_multiformis_ATCC_25196 1 1
Nitrosomonas_sp._Is79A3 1 1
Nitrosomonas_eutropha_C91 1 1
Methylotenera_versatilis_301 1 1
Methylotenera_mobilis_JLW8 1 1
Methylovorus_sp._MP688 1 1
Methylovorus_glucosetrophus_SIP3-4 1 1
Methylobacillus_flagellatus_KT 2 2
Dinoroseobacter_shibae_DFL_12 1 1
Pseudovibrio_sp._FO-BEG1 1 1
Roseobacter_litoralis_Och_149 2 2
Roseobacter_denitrificans_OCh_114 2 2
Rhodospirillum_rubrum_F11 2 2
Azospirillum_brasilense_Sp245 1 1
Gluconacetobacter_xylinus_NBRC_3288 1 1
Gluconacetobacter_diazotrophicus_PAl_5 1 1
Acidiphilium_multivorum_AIU301 1 1
Acidiphilium_cryptum_JF-5 1 1
Gluconobacter_oxydans_621H 1 1
alpha_proteobacterium_HIMB59 1 1
Starkeya_novella_DSM_506 2 2
Azorhizobium_caulinodans_ORS_571 1 1
Methylobacterium_chloromethanicum_CM4 1 1
Methylobacterium_extorquens_AM1 1 1
Methylobacterium_sp._4-46 1 1
Methylobacterium_populi_BJ001 1 1
Methylobacterium_radiotolerans_JCM_2831 1 1
Ochrobactrum_anthropi_ATCC_49188 4 4
Brucella_microti_CCM_4915 2 2
Brucella_pinnipedialis_B2/94 2 2
Brucella_canis_ATCC_23365 2 2
Brucella_suis_ATCC_23445 2 2
Brucella_melitensis_ATCC_23457 2 2
Brucella_ovis_ATCC_25840 2 2
Brucella_abortus_S19 1 1
Sinorhizobium_fredii_NGR234 3 3
Sinorhizobium_medicae_WSM419 3 3
Sinorhizobium_meliloti_AK83 3 3
Rhizobium_etli_CIAT_652 3 3
Rhizobium_leguminosarum_bv._viciae_3841 5 5
Agrobacterium_tumefaciens_str._C58 1 1
Agrobacterium_radiobacter_K84 3 3
Mesorhizobium_sp._BNC1 1 1
Mesorhizobium_opportunistum_WSM2075 3 3
Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 3 3
Mesorhizobium_loti_MAFF303099 4 4
Bradyrhizobium_japonicum_USDA_110 1 1
Bradyrhizobium_sp._ORS_278 1 1
Saccharophagus_degradans_2-40 1 1
Teredinibacter_turnerae_T7901 1 1
Cellvibrio_japonicus_Ueda107 1 1
Pasteurella_multocida_subsp._multocida_str._3480 1 1
Actinobacillus_succinogenes_130Z 2 2
Actinobacillus_pleuropneumoniae_serovar_5b_str._L20 1 1
Aeromonas_veronii_B565 1 1
Aeromonas_salmonicida_subsp._salmonicida_A449 1 1
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 1 1
Vibrio_sp._Ex25 1 1
Vibrio_parahaemolyticus_RIMD_2210633 1 1
Vibrio_furnissii_NCTC_11218 1 1
Photobacterium_profundum_SS9 1 1
Psychromonas_sp._CNPT3 2 2
Marinobacter_adhaerens_HP15 1 1
Marinobacter_hydrocarbonoclasticus_ATCC_49840 1 1
Marinobacter_aquaeolei_VT8 1 1
Chromohalobacter_salexigens_DSM_3043 2 2
Halomonas_elongata_DSM_2581 2 2
Methylomicrobium_alcaliphilum 1 1
Methylomonas_methanica_MC09 1 1
Methylococcus_capsulatus_str._Bath 1 1
Rhodanobacter_denitrificans 1 1
Pseudoxanthomonas_suwonensis_11-1 2 2
Stenotrophomonas_maltophilia_K279a 1 1
Xanthomonas_axonopodis_pv._citri_str._306 1 1
Xanthomonas_campestris_pv._campestris_str._B100 1 1
Spiribacter_sp._UAH-SP71 2 2
Legionella_pneumophila_str._Corby 1 1
Providencia_stuartii_MRSN_2154 2 2
Proteus_mirabilis_HI4320 2 2
Edwardsiella_ictaluri_93-146 3 3
Rahnella_sp._Y9602 1 1
Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 1 1
Yersinia_pseudotuberculosis_IP_31758 1 1
Yersinia_pestis_Pestoides_F 1 1
Yersinia_enterocolitica_subsp._enterocolitica_8081 1 1
Serratia_sp._AS12 1 1
Serratia_sp._ATCC_39006 1 1
Serratia_plymuthica_AS9 1 1
Serratia_proteamaculans_568 1 1
Pectobacterium_atrosepticum_SCRI1043 1 1
Pantoea_sp._At-9b 2 2
Pantoea_vagans_C9-1 1 1
Pantoea_ananatis_LMG_20103 1 1
Erwinia_billingiae_Eb661 2 2
Escherichia_blattae_DSM_4481 2 2
Cronobacter_turicensis_z3032 1 1
Cronobacter_sakazakii_ES15 1 1
Shigella_flexneri_5_str._8401 1 1
Shigella_boydii_CDC_3083-94 1 1
Klebsiella_oxytoca_E718 2 2
Klebsiella_variicola_At-22 2 2
Klebsiella_pneumoniae_NTUH-K2044 2 2
Enterobacter_aerogenes_KCTC_2190 2 2
Escherichia_fergusonii_ATCC_35469 1 1
Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 1 1
Enterobacter_sp._R4-368 1 1
Enterobacter_sp._638 1 1
Enterobacter_asburiae_LF7a 1 1
Enterobacter_cloacae_subsp._dissolvens_SDM 1 1
Citrobacter_rodentium_ICC168 1 1
Citrobacter_koseri_ATCC_BAA-895 2 2
Azotobacter_vinelandii_DJ 1 1
Pseudomonas_sp._TKP 1 1
Pseudomonas_aeruginosa_UCBPP-PA14 1 1
Pseudomonas_sp._VLB120 1 1
Psychrobacter_sp._PRwf-1 1 1
Methylophaga_sp._JAM1 1 1
Salinarchaeum_sp._Harcht-Bsk1 1 1
Halorubrum_lacusprofundi_ATCC_49239 1 1
Haloquadratum_walsbyi_DSM_16790 1 1
Haloferax_mediterranei_ATCC_33500 1 1
Haloferax_volcanii_DS2 1 1
Halalkalicoccus_jeotgali_B3 1 1
Acholeplasma_laidlawii_PG-8A 9 9

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   2 2
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   1 1
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   1 1
Cryptococcus_neoformans_var._grubii_H99_ 2 2
Cryptococcus_neoformans_B-3501A_ 2 2
Cryptococcus_neoformans_JEC21_ 3 3
Paracoccidioides_brasiliensis_Pb01_ 1 1
Paracoccidioides_brasiliensis_Pb03_ 1 1
Coccidioides_posadasii_str._Silveira_ 1 1
Coccidioides_immitis_RMSCC_3703_ 1 1
Coccidioides_immitis_RMSCC_2394_ 1 1
Coccidioides_immitis_H538.4_ 1 1
Ajellomyces_dermatitidis_ER-3_ 1 1
Histoplasma_capsulatum_H143 1 1
Histoplasma_capsulatum_H88 1 1
Histoplasma_capsulatum_G186AR 1 1
Aspergillus_fumigatus_A1163_ 1 1
Candida_albicans_WO-1_ 1 1
Saccharomyces_cerevisiae_UC5 2 2
Saccharomyces_cerevisiae_PW5 2 2
Saccharomyces_cerevisiae_FL100 1 1
Saccharomyces_cerevisiae_CLIB324 1 1
Saccharomyces_cerevisiae_CBS7960 2 2
Saccharomyces_cerevisiae_YJM269 1 1
Saccharomyces_cerevisiae_T7 2 2
Saccharomyces_cerevisiae_FostersB 1 1
Saccharomyces_cerevisiae_FostersO 1 1
Saccharomyces_cerevisiae_VL3 1 1
Saccharomyces_cerevisiae_Vin13 1 1
Saccharomyces_cerevisiae_LalvinQA23 1 1
Saccharomyces_cerevisiae_AWRI796 1 1
Saccharomyces_cerevisiae_Sigma1278b 1 1
Saccharomyces_cerevisiae_W303 2 2
Saccharomyces_cerevisiae_JAY291 2 2
Saccharomyces_cerevisiae_AWRI1631 2 2
Saccharomyces_cerevisiae_M22 1 1
Saccharomyces_cerevisiae_CLIB215 1 1
Saccharomyces_cerevisiae_Y10 1 1
Saccharomyces_cerevisiae_YJM789_ 1 1
Saccharomyces_cerevisiae_YJM789 2 2
Saccharomyces_cerevisiae_RM11-1a_ 1 1
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   2 2
Schizosaccharomyces_pombe_972h-_ 2 2
Batrachochytrium_dendrobatidis_JAM81_ 1 1
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   1 1
Hordeum_vulgare_22   (Domesticated barley)   2 2
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   1 1
Chroococcidiopsis_thermalis_PCC_7203 1 1
Cyanothece_sp._PCC_7822 1 1
Cyanothece_sp._PCC_7424 1 1
Pleurocapsa_minor_Pleurocapsa_sp._PCC_7327 1 1
Calothrix_parietina_Calothrix_sp._PCC_6303 1 1
Anabaena_cylindrica_PCC_7122 1 1
Candidatus_Phytoplasma_solani_tobfin_28409 2 2
Candidatus_Phytoplasma_australiense_Strawberry_lethal_yellows_phytoplasma_(CPA)_str._NZSb11 2 2
Candidatus_Phytoplasma_australiense 2 2
Mesoplasma_florum_W37 2 2
Spiroplasma_syrphidicola_EA-1 4 4
Spiroplasma_diminutum_CUAS-1 3 3
Spiroplasma_chrysopicola_DF-1 4 4
Spiroplasma_taiwanense_CT-1 3 3
Spiroplasma_apis_B31 2 2
Ureaplasma_parvum_serovar_3_str._ATCC_700970 2 2
Mycoplasma_leachii_PG50 3 3
Mycoplasma_mycoides_subsp._mycoides_SC_str._Gladysdale 3 3
Mycoplasma_mycoides_subsp._mycoides_SC_str._PG1 3 3
Mycoplasma_cynos_C142 3 3
Mycoplasma_bovis_Hubei-1 2 2
Mycoplasma_bovis_PG45 2 2
Mycoplasma_putrefaciens_Mput9231 3 3
Mycoplasma_fermentans_JER 2 2
Mycoplasma_fermentans_PG18 2 2
Mycoplasma_agalactiae 2 2
Mycoplasma_pneumoniae_M129-B7 2 2
Mycoplasma_pneumoniae_FH 2 2
Mycoplasma_pneumoniae_M129 2 2
Mycoplasma_hyorhinis_SK76 2 2
Mycoplasma_hyorhinis_MCLD 2 2
Mycoplasma_hyorhinis_HUB-1 2 2
Mycoplasma_hyorhinis_DBS_1050 2 2
Mycoplasma_genitalium_M2321 2 2
Mycoplasma_genitalium_M2288 2 2
Mycoplasma_genitalium_M6282 2 2
Mycoplasma_genitalium_M6320 2 2
Mycoplasma_gallisepticum_NC08_2008.031-4-3P 2 2
Mycoplasma_gallisepticum_CA06_2006.052-5-2P 2 2
Mycoplasma_gallisepticum_NC06_2006.080-5-2P 2 2
Mycoplasma_gallisepticum_WI01_2001.043-13-2P 2 2
Mycoplasma_gallisepticum_NY01_2001.047-5-1P 2 2
Mycoplasma_gallisepticum_NC96_1596-4-2P 2 2
Mycoplasma_gallisepticum_NC95_13295-2-2P 2 2
Mycoplasma_gallisepticum_VA94_7994-1-7P 2 2
Mycoplasma_gallisepticum_S6 1 1
Mycoplasma_gallisepticum_str._R(high) 2 2
Mycoplasma_gallisepticum_str._R(low) 2 2
Gordonibacter_pamelaeae_7-10-1-b 4 4
Adlercreutzia_equolifaciens_DSM_19450 5 5
Frankia_sp._EuI1c 1 1
Nocardiopsis_alba_ATCC_BAA-2165 1 1
Streptomyces_albus_J1074 2 2
Streptomyces_rapamycinicus_NRRL_5491 5 5
Streptomyces_davawensis_JCM_4913 2 2
Streptomyces_fulvissimus_DSM_40593 2 2
Streptomyces_venezuelae_ATCC_10712 2 2
Streptomyces_collinus_Tu_365 2 2
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 3 3
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 2 2
Saccharothrix_espanaensis_DSM_44229 3 3
Amycolatopsis_mediterranei_RB 3 3
Amycolatopsis_mediterranei_S699 3 3
Amycolatopsis_mediterranei_S699 3 3
Amycolatopsis_orientalis_HCCB10007 4 4
Propionibacterium_avidum_44067 2 2
Propionibacterium_acnes_ATCC_11828 2 2
Propionibacterium_acnes_TypeIA2_P.acn31 2 2
Propionibacterium_acnes_TypeIA2_P.acn17 2 2
Propionibacterium_acnes_TypeIA2_P.acn33 2 2
Propionibacterium_acnes_C1 1 1
Propionibacterium_acnes_HL096PA1 2 2
Propionibacterium_acnes_6609 2 2
Propionibacterium_acnes_266 2 2
Propionibacterium_acnes_KPA171202 2 2
Propionibacterium_acidipropionici_ATCC_4875 2 2
Actinoplanes_friuliensis_DSM_7358 4 4
Rhodococcus_pyridinivorans_SB3094 1 1
Rhodococcus_erythropolis_CCM2595 2 2
Nocardia_brasiliensis_ATCC_700358 1 1
Mycobacterium_sp._MOTT36Y 1 1
Mycobacterium_sp._JDM601 1 1
Mycobacterium_abscessus_subsp._bolletii_50594 2 2
Mycobacterium_liflandii_128FXT 1 1
Mycobacterium_sp._KMS 3 3
Mycobacterium_sp._MCS 3 3
Mycobacterium_yongonense_05-1390 1 1
Mycobacterium_intracellulare_MOTT-64 1 1
Mycobacterium_indicus_pranii_MTCC_9506 1 1
Mycobacterium_intracellulare_MOTT-02 1 1
Mycobacterium_avium_subsp._paratuberculosis_MAP4 1 1
Mycobacterium_avium_subsp._paratuberculosis_K-10 1 1
Mycobacterium_canettii_CIPT_140070017 1 1
Mycobacterium_canettii_CIPT_140060008 1 1
Mycobacterium_canettii_CIPT_140070008 1 1
Mycobacterium_canettii_CIPT_140070010 1 1
Mycobacterium_tuberculosis_EAI5/NITR206 1 1
Mycobacterium_tuberculosis_EAI5 1 1
Mycobacterium_tuberculosis_CAS/NITR204 1 1
Mycobacterium_tuberculosis_str._Beijing/NITR203 1 1
Mycobacterium_tuberculosis_UT205 1 1
Mycobacterium_tuberculosis_RGTB423 1 1
Mycobacterium_tuberculosis_RGTB327 1 1
Mycobacterium_tuberculosis_CTRI-2 1 1
Mycobacterium_tuberculosis_str._Erdman_=_ATCC_35801 1 1
Mycobacterium_tuberculosis_KZN_605 1 1
Mycobacterium_tuberculosis_KZN_4207 1 1
Mycobacterium_tuberculosis_CCDC5180 1 1
Mycobacterium_tuberculosis_CCDC5079 1 1
Mycobacterium_tuberculosis_CCDC5079 1 1
Mycobacterium_tuberculosis_H37Ra 1 1
Mycobacterium_tuberculosis_str._Haarlem 1 1
Mycobacterium_tuberculosis_F11 1 1
Mycobacterium_tuberculosis_H37Rv 1 1
Mycobacterium_tuberculosis_CDC1551 1 1
Mycobacterium_bovis_AF2122/97 1 1
Mycobacterium_bovis_BCG_str._Korea_1168P 1 1
Mycobacterium_bovis_BCG_str._Mexico 1 1
Mycobacterium_bovis_BCG_str._Tokyo_172 1 1
Mycobacterium_gilvum_Spyr1 1 1
Mycobacterium_smegmatis_str._MC2_155 4 4
Mycobacterium_kansasii_ATCC_12478 1 1
Corynebacterium_maris_DSM_45190 1 1
Corynebacterium_halotolerans_YIM_70093_=_DSM_44683 1 1
Corynebacterium_terpenotabidum_Y-11 2 1
Corynebacterium_ulcerans_BR-AD22 2 2
Corynebacterium_ulcerans_809 2 2
Corynebacterium_urealyticum_DSM_7111 1 1
Corynebacterium_argentoratense_DSM_44202 1 1
Corynebacterium_callunae_DSM_20147 1 1
Corynebacterium_pseudotuberculosis_258 2 2
Corynebacterium_pseudotuberculosis_Cp162 2 2
Corynebacterium_pseudotuberculosis_P54B96 2 2
Corynebacterium_pseudotuberculosis_267 2 2
Corynebacterium_pseudotuberculosis_1/06-A 2 2
Corynebacterium_pseudotuberculosis_42/02-A 2 2
Corynebacterium_pseudotuberculosis_3/99-5 2 2
Corynebacterium_pseudotuberculosis_31 2 2
Corynebacterium_pseudotuberculosis_CIP_52.97 2 2
Corynebacterium_pseudotuberculosis_PAT10 2 2
Corynebacterium_pseudotuberculosis_I19 2 2
Corynebacterium_pseudotuberculosis_FRC41 2 2
Corynebacterium_pseudotuberculosis_C231 2 2
Corynebacterium_pseudotuberculosis_1002 2 2
Corynebacterium_glutamicum_MB001 1 1
Corynebacterium_glutamicum_SCgG2 1 1
Corynebacterium_glutamicum_SCgG1 1 1
Corynebacterium_glutamicum_ATCC_13032 1 1
Corynebacterium_glutamicum_ATCC_13032 1 1
Corynebacterium_glutamicum_ATCC_13032 1 1
Corynebacterium_diphtheriae_BH8 2 2
Corynebacterium_diphtheriae_INCA_402 2 2
Corynebacterium_diphtheriae_VA01 1 1
Corynebacterium_diphtheriae_HC04 1 1
Corynebacterium_diphtheriae_HC03 1 1
Corynebacterium_diphtheriae_HC02 2 2
Corynebacterium_diphtheriae_HC01 1 1
Corynebacterium_diphtheriae_241 1 1
Corynebacterium_diphtheriae_CDCE_8392 2 2
Corynebacterium_diphtheriae_PW8 2 2
Corynebacterium_diphtheriae_C7_(beta) 2 2
Corynebacterium_diphtheriae_31A 2 2
Leifsonia_xyli_subsp._cynodontis_DSM_46306 1 1
Clavibacter_michiganensis_subsp._sepedonicus 2 2
Clavibacter_michiganensis_subsp._nebraskensis_NCPPB_2581 2 2
Actinomyces_odontolyticus_ATCC_17982 2 2
Actinomyces_viscosus_C505 3 3
Dehalococcoides_mccartyi_GY50 7 7
Dehalococcoides_mccartyi_DCMB5 7 7
Dehalococcoides_mccartyi_BTF08 7 7
Dehalococcoides_sp._GT 7 7
Dehalococcoides_sp._VS 7 7
Dehalococcoides_sp._CBDB1 7 7
Deinococcus_peraridilitoris_DSM_19664 1 1
Thermus_oshimai_JL-2 3 3
Thermus_thermophilus_JL-18 3 3
Thermus_thermophilus_SG0.5JP17-16 3 3
Thermus_thermophilus_HB8 2 2
[Eubacterium]_cylindroides_[Eubacterium]_cylindroides_T2-87 5 5
Erysipelothrix_rhusiopathiae_SY1027 4 4
Eubacterium_siraeum_V10Sc8a 2 2
Faecalibacterium_prausnitzii_L2-6 4 4
Ruminococcus_champanellensis_18P13 2 2
Sulfobacillus_acidophilus_TPY 1 1
Clostridium_acidurici_9a 2 2
Desulfosporosinus_meridiei_DSM_13257 5 5
Desulfitobacterium_dichloroeliminans_LMG_P-21439 5 5
Desulfitobacterium_hafniense_DCB-2 6 6
Desulfotomaculum_gibsoniae_DSM_7213 3 3
Clostridium_difficile_BI1 3 3
Clostridium_difficile_R20291 3 3
Clostridium_difficile_CD196 3 3
Clostridium_saccharolyticum_Clostridium_cf._saccharolyticum_K10 3 3
Coprococcus_catus_GD/7 4 4
Roseburia_intestinalis_XB6B4 5 5
Candidatus_Arthromitus_sp._SFB-rat-Yit 1 1
Candidatus_Arthromitus_sp._SFB-mouse-Yit 1 1
Clostridium_sp._SY8519 2 2
Clostridium_saccharobutylicum_DSM_13864 5 5
Clostridium_autoethanogenum_DSM_10061 3 3
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 4 4
Clostridium_kluyveri_NBRC_12016 5 5
Clostridium_tetani_genome_12124569 6 6
Clostridium_perfringens_SM101 4 4
Clostridium_perfringens_str._13 5 5
Clostridium_pasteurianum_BC1 3 3
Clostridium_botulinum_H04402_065 5 5
Clostridium_botulinum_BKT015925 5 5
Clostridium_botulinum_F_str._230613 5 5
Clostridium_botulinum_F_str._Langeland 5 5
Clostridium_botulinum_E3_str._Alaska_E43 7 7
Clostridium_botulinum_B1_str._Okra 5 5
Clostridium_botulinum_Ba4_str._657 6 6
Clostridium_botulinum_A2_str._Kyoto 5 5
Clostridium_botulinum_A3_str._Loch_Maree 5 5
Clostridium_botulinum_A_str._Hall 5 5
Clostridium_botulinum_A_str._ATCC_19397 5 5
Clostridium_acetobutylicum_DSM_1731 4 4
Clostridium_acetobutylicum_EA_2018 4 4
Thermoanaerobacterium_saccharolyticum_JW/SL-YS485 2 2
Thermoanaerobacterium_thermosaccharolyticum_M0795 2 2
Thermacetogenium_phaeum_DSM_12270 2 2
Thermoanaerobacter_sp._X513 3 3
Halobacteroides_halobius_DSM_5150 2 2
Carnobacterium_maltaromaticum_LMA28 10 10
Melissococcus_plutonius_ATCC_35311 1 1
Enterococcus_mundtii_QU_25 5 5
Enterococcus_casseliflavus_EC20 5 5
Enterococcus_faecium_Aus0085 5 5
Enterococcus_faecium_NRRL_B-2354 5 5
Enterococcus_faecium_DO 5 5
Enterococcus_faecalis_str._Symbioflor_1 5 5
Enterococcus_faecalis_D32 5 5
Enterococcus_faecalis_OG1RF 5 5
Enterococcus_faecalis_V583 5 5
Leuconostoc_carnosum_JB16 2 2
Leuconostoc_mesenteroides_subsp._mesenteroides_J18 2 2
Leuconostoc_gelidum_JB7 2 2
Lactobacillus_paracasei_subsp._paracasei_8700:2 5 5
Lactobacillus_casei_LOCK919 5 5
Lactobacillus_casei_W56 6 6
Lactobacillus_casei_LC2W 6 6
Lactobacillus_casei_BD-II 6 6
Lactobacillus_casei_BL23 6 6
Lactobacillus_casei_str._Zhang 5 5
Lactobacillus_rhamnosus_LOCK908 5 5
Lactobacillus_rhamnosus_LOCK900 5 5
Lactobacillus_rhamnosus_ATCC_8530 5 5
Lactobacillus_rhamnosus_GG 5 5
Lactobacillus_rhamnosus_GG 5 5
Lactobacillus_johnsonii_N6.2 4 4
Lactobacillus_johnsonii_DPC_6026 3 3
Lactobacillus_johnsonii_NCC_533 4 4
Lactobacillus_salivarius_UCC118 6 6
Lactobacillus_fermentum_F-6 3 3
Lactobacillus_fermentum_CECT_5716 2 2
Lactobacillus_amylovorus_GRL_1112 5 5
Lactobacillus_reuteri_TD1 2 2
Lactobacillus_reuteri_I5007 2 2
Lactobacillus_reuteri_JCM_1112 2 2
Lactobacillus_reuteri_SD2112 2 2
Lactobacillus_plantarum_16 9 9
Lactobacillus_plantarum_ZJ316 8 8
Lactobacillus_plantarum_subsp._plantarum_ST-III 8 8
Lactobacillus_plantarum_subsp._plantarum_P-8 8 8
Lactobacillus_plantarum_WCFS1 8 8
Lactobacillus_helveticus_R0052 6 6
Lactobacillus_helveticus_H10 6 6
Lactobacillus_helveticus_CNRZ32 3 3
Lactobacillus_delbrueckii_subsp._bulgaricus_ND02 6 6
Lactobacillus_delbrueckii_subsp._bulgaricus_ATCC_11842 3 3
Lactobacillus_delbrueckii_subsp._bulgaricus_2038 4 4
Lactobacillus_brevis_KB290 6 6
Lactobacillus_acidophilus_La-14 5 5
Lactobacillus_acidophilus_NCFM 5 5
Pediococcus_pentosaceus_SL4 5 5
Lactococcus_garvieae_Lg2 4 4
Lactococcus_lactis_subsp._lactis_KLDS_4.0325 6 6
Lactococcus_lactis_subsp._lactis_IO-1 6 6
Lactococcus_lactis_subsp._lactis_CV56 6 6
Lactococcus_lactis_subsp._lactis_KF147 6 6
Lactococcus_lactis_subsp._lactis_Il1403 6 6
Lactococcus_lactis_subsp._cremoris_KW2 6 6
Lactococcus_lactis_subsp._cremoris_UC509.9 6 6
Lactococcus_lactis_subsp._cremoris_A76 7 7
Lactococcus_lactis_subsp._cremoris_NZ9000 5 5
Lactococcus_lactis_subsp._cremoris_SK11 4 4
Streptococcus_constellatus_subsp._pharyngis_C1050 6 6
Streptococcus_constellatus_subsp._pharyngis_C818 6 6
Streptococcus_constellatus_subsp._pharyngis_C232 6 6
Streptococcus_intermedius_B196 4 4
Streptococcus_intermedius_C270 6 6
Streptococcus_anginosus_C238 6 6
Streptococcus_anginosus_C1051 6 6
Streptococcus_gallolyticus_subsp._gallolyticus_ATCC_BAA-2069 4 4
Streptococcus_gallolyticus_subsp._gallolyticus_ATCC_43143 6 6
Streptococcus_lutetiensis_033 4 4
Streptococcus_equi_subsp._zooepidemicus_ATCC_35246 4 4
Streptococcus_equi_subsp._zooepidemicus_MGCS10565 4 4
Streptococcus_equi_subsp._zooepidemicus 6 6
Streptococcus_dysgalactiae_subsp._equisimilis_167 6 6
Streptococcus_dysgalactiae_subsp._equisimilis_AC-2713 6 6
Streptococcus_dysgalactiae_subsp._equisimilis_ATCC_12394 6 6
Streptococcus_dysgalactiae_subsp._equisimilis_RE378 6 6
Streptococcus_oligofermentans_AS_1.3089 4 4
Streptococcus_iniae_SF1 6 6
Streptococcus_parasanguinis_FW213 4 4
Streptococcus_pyogenes_HSC5 4 4
Streptococcus_pyogenes_A20 4 4
Streptococcus_pyogenes_MGAS1882 4 4
Streptococcus_pyogenes_MGAS15252 4 4
Streptococcus_pyogenes_Alab49 4 4
Streptococcus_pyogenes_MGAS10750 6 6
Streptococcus_pyogenes_MGAS10270 4 4
Streptococcus_pyogenes_MGAS2096 4 4
Streptococcus_pyogenes_MGAS9429 4 4
Streptococcus_pyogenes_MGAS6180 4 4
Streptococcus_pyogenes_NZ131 4 4
Streptococcus_pyogenes_MGAS8232 6 6
Streptococcus_pyogenes_MGAS10394 7 7
Streptococcus_pyogenes_MGAS315 4 4
Streptococcus_pyogenes_SSI-1 4 4
Streptococcus_pyogenes_M1_476 4 4
Streptococcus_pyogenes_MGAS5005 4 4
Streptococcus_pyogenes_M1_GAS 4 4
Streptococcus_pneumoniae_A026 3 3
Streptococcus_pneumoniae_ST556 3 3
Streptococcus_pneumoniae_SPNA45 2 2
Streptococcus_pneumoniae_SPN994039 3 3
Streptococcus_pneumoniae_SPN994038 3 3
Streptococcus_pneumoniae_SPN034183 3 3
Streptococcus_pneumoniae_SPN034156 3 3
Streptococcus_pneumoniae_INV104 3 3
Streptococcus_pneumoniae_INV200 3 3
Streptococcus_pneumoniae_OXC141 3 3
Streptococcus_pneumoniae_gamPNI0373 3 3
Streptococcus_pneumoniae_AP200 3 3
Streptococcus_pneumoniae_ATCC_700669 3 3
Streptococcus_pneumoniae_TCH8431/19A 3 3
Streptococcus_pneumoniae_CGSP14 3 3
Streptococcus_pneumoniae_G54 3 3
Streptococcus_pneumoniae_JJA 3 3
Streptococcus_pneumoniae_70585 3 3
Streptococcus_pneumoniae_Hungary19A-6 5 5
Streptococcus_pneumoniae_Taiwan19F-14 3 3
Streptococcus_pneumoniae_D39 3 3
Streptococcus_pneumoniae_670-6B 3 3
Streptococcus_pneumoniae_R6 3 3
Streptococcus_pneumoniae_TIGR4 3 3
Streptococcus_agalactiae_ILRI112 5 5
Streptococcus_agalactiae_ILRI005 5 5
Streptococcus_agalactiae_09mas018883 5 5
Streptococcus_agalactiae_2-22 3 3
Streptococcus_agalactiae_SA20-06 5 5
Streptococcus_agalactiae_GD201008-001 5 5
Streptococcus_agalactiae_NEM316 5 5
Streptococcus_agalactiae_2603V/R 5 5
Streptococcus_mutans_GS-5 3 3
Streptococcus_mutans_LJ23 3 3
Streptococcus_mutans_UA159 3 3
Streptococcus_thermophilus_MN-ZLW-002 4 4
Streptococcus_thermophilus_JIM_8232 4 4
Streptococcus_thermophilus_ND03 4 4
Streptococcus_thermophilus_CNRZ1066 4 4
Streptococcus_thermophilus_LMG_18311 4 4
Streptococcus_suis_T15 6 6
Streptococcus_suis_TL13 6 6
Streptococcus_suis_SC070731 6 6
Streptococcus_suis_S735 6 6
Streptococcus_suis_ST3 6 6
Streptococcus_suis_D9 6 6
Streptococcus_suis_SS12 6 6
Streptococcus_suis_D12 6 6
Streptococcus_suis_ST1 6 6
Streptococcus_suis_A7 6 6
Streptococcus_suis_JS14 6 6
Streptococcus_suis_BM407 6 6
Streptococcus_suis_SC84 6 6
Streptococcus_suis_GZ1 6 6
Streptococcus_suis_98HAH33 6 6
Streptococcus_suis_05ZYH33 7 7
Streptococcus_salivarius_CCHSS3 5 5
Streptococcus_salivarius_JIM8777 5 5
Exiguobacterium_antarcticum_B7 6 6
Thermobacillus_composti_KWC4 2 2
Paenibacillus_sp._Y412MC10 3 3
Paenibacillus_mucilaginosus_KNP414 2 2
Paenibacillus_mucilaginosus_K02 2 2
Paenibacillus_larvae_subsp._larvae_DSM_25430 3 3
Paenibacillus_polymyxa_CR1 4 4
Paenibacillus_polymyxa_SC2 4 4
Paenibacillus_polymyxa_E681 4 4
Listeria_monocytogenes_EGD_sequence 5 5
Listeria_monocytogenes_N53-1 9 9
Listeria_monocytogenes_La111 8 8
Listeria_monocytogenes_serotype_4b_str._LL195 5 5
Listeria_monocytogenes_07PF0776 5 5
Listeria_monocytogenes_M7 5 5
Listeria_monocytogenes_J1-220 5 5
Listeria_monocytogenes_J1816 5 5
Listeria_monocytogenes_SLCC2376 5 5
Listeria_monocytogenes_SLCC5850 5 5
Listeria_monocytogenes_ATCC_19117 5 5
Listeria_monocytogenes_L312 5 5
Listeria_monocytogenes_SLCC2479 5 5
Listeria_monocytogenes_SLCC7179 5 5
Listeria_monocytogenes_SLCC2540 5 5
Listeria_monocytogenes_SLCC2378 5 5
Listeria_monocytogenes_serotype_1/2b_str._SLCC2755 5 5
Listeria_monocytogenes_serotype_1/2c_str._SLCC2372 5 5
Listeria_monocytogenes_serotype_7_str._SLCC2482 5 5
Listeria_monocytogenes_08-5578 5 5
Listeria_monocytogenes_08-5923 5 5
Listeria_monocytogenes_L99 5 5
Listeria_monocytogenes_HCC23 5 5
Listeria_monocytogenes_10403S 5 5
Listeria_monocytogenes_J0161 5 5
Listeria_monocytogenes_Finland_1998 5 5
Listeria_monocytogenes_FSL_R2-561 5 5
Listeria_monocytogenes_serotype_4b_str._F2365 5 5
Listeria_monocytogenes_EGD-e 5 5
Geobacillus_sp._C56-T3 3 3
Geobacillus_sp._Y4.1MC1 3 3
Geobacillus_sp._Y412MC52 4 4
Geobacillus_sp._Y412MC61 4 4
Amphibacillus_xylanus_NBRC_15112 6 6
Bacillus_amyloliquefaciens_subsp._plantarum_sequencing 2 2
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5033 2 2
Bacillus_amyloliquefaciens_subsp._plantarum_AS43.3 2 2
Bacillus_amyloliquefaciens_subsp._plantarum_YAU_B9601-Y2 2 2
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5113 2 2
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5036 2 2
Bacillus_amyloliquefaciens_subsp._plantarum_CAU_B946 2 2
Bacillus_amyloliquefaciens_LFB112 2 2
Bacillus_amyloliquefaciens_CC178 2 2
Bacillus_amyloliquefaciens_Y2 2 2
Bacillus_amyloliquefaciens_IT-45 2 2
Bacillus_amyloliquefaciens_XH7 2 2
Bacillus_amyloliquefaciens_LL3 2 2
Bacillus_amyloliquefaciens_TA208 2 2
Bacillus_amyloliquefaciens_DSM_7 2 2
Bacillus_licheniformis_9945A 3 3
Bacillus_subtilis_PY79 2 2
Bacillus_subtilis_XF-1 2 2
Bacillus_subtilis_QB928 2 2
Bacillus_subtilis_BSn5 2 2
Bacillus_subtilis_subsp._subtilis_str._BAB-1 2 2
Bacillus_subtilis_subsp._subtilis_str._BSP1 2 2
Bacillus_subtilis_subsp._subtilis_str._RO-NN-1 2 2
Bacillus_subtilis_subsp._subtilis_6051-HGW 2 2
Bacillus_subtilis_subsp._spizizenii_TU-B-10 2 2
Bacillus_subtilis_subsp._spizizenii_str._W23 2 2
Bacillus_subtilis_subsp._natto_BEST195 2 2
Bacillus_licheniformis_DSM_13_=_ATCC_14580 3 3
Bacillus_infantis_NRRL_B-14911 6 6
Bacillus_cereus_subsp._cytotoxis_NVH_391-98 4 4
Bacillus_toyonensis_BCT-7112 5 5
Bacillus_thuringiensis_HD-771 6 6
Bacillus_thuringiensis_HD-789 6 6
Bacillus_thuringiensis_MC28 7 7
Bacillus_thuringiensis_serovar_chinensis_CT-43 6 6
Bacillus_thuringiensis_YBT-1518 6 6
Bacillus_thuringiensis_Bt407 6 6
Bacillus_thuringiensis_serovar_konkukian_str._97-27 6 6
Bacillus_thuringiensis_serovar_kurstaki_str._HD73 6 6
Bacillus_thuringiensis_BMB171 6 6
Bacillus_thuringiensis_serovar_finitimus_YBT-020 6 6
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 6 6
Bacillus_cereus_FRI-35 6 6
Bacillus_cereus_biovar_anthracis_str._CI 6 6
Bacillus_cereus_AH820 6 6
Bacillus_cereus_AH187 6 6
Bacillus_cereus_B4264 6 6
Bacillus_cereus_G9842 6 6
Bacillus_cereus_Q1 6 6
Bacillus_cereus_F837/76 5 5
Bacillus_cereus_NC7401 6 6
Bacillus_cereus_E33L 6 6
Bacillus_cereus_ATCC_14579 6 6
Bacillus_cereus_ATCC_10987 6 6
Bacillus_anthracis_str._H9401 6 6
Bacillus_anthracis_str._CDC_684 6 6
Bacillus_anthracis_str._'Ames_Ancestor' 6 6
Bacillus_anthracis_str._Sterne 6 6
Bacillus_anthracis_str._Ames 6 6
Bacillus_megaterium_WSH-002 4 4
Bacillus_megaterium_QM_B1551 4 4
Bacillus_coagulans_36D1 3 3
Staphylococcus_aureus_subsp._aureus_MSHR1132 3 3
Staphylococcus_pseudintermedius_ED99 3 3
Staphylococcus_pasteuri_SP1 3 3
Staphylococcus_lugdunensis_N920143 2 2
Staphylococcus_warneri_SG1 3 3
Staphylococcus_epidermidis_ATCC_12228 3 3
Staphylococcus_aureus_CA-347 3 3
Staphylococcus_aureus_Bmb9393 3 3
Staphylococcus_aureus_M1 3 3
Staphylococcus_aureus_08BA02176 3 3
Staphylococcus_aureus_ST228/18412 3 3
Staphylococcus_aureus_ST228/18341 3 3
Staphylococcus_aureus_ST228/16125 3 3
Staphylococcus_aureus_ST228/16035 3 3
Staphylococcus_aureus_ST228/15532 3 3
Staphylococcus_aureus_ST228/10497 3 3
Staphylococcus_aureus_ST228/10388 3 3
Staphylococcus_aureus_04-02981 3 3
Staphylococcus_aureus_RF122 3 3
Staphylococcus_aureus_subsp._aureus_Z172 3 3
Staphylococcus_aureus_subsp._aureus_6850 3 3
Staphylococcus_aureus_subsp._aureus_SA957 3 3
Staphylococcus_aureus_subsp._aureus_CN1 3 3
Staphylococcus_aureus_subsp._aureus_SA40 3 3
Staphylococcus_aureus_subsp._aureus_11819-97 3 3
Staphylococcus_aureus_subsp._aureus_M013 3 3
Staphylococcus_aureus_subsp._aureus_HO_5096_0412 3 3
Staphylococcus_aureus_subsp._aureus_VC40 4 3
Staphylococcus_aureus_subsp._aureus_T0131 3 3
Staphylococcus_aureus_subsp._aureus_LGA251 3 3
Staphylococcus_aureus_subsp._aureus_ECT-R_2 3 3
Staphylococcus_aureus_subsp._aureus_JKD6159 3 3
Staphylococcus_aureus_subsp._aureus_ED133 3 3
Staphylococcus_aureus_subsp._aureus_ED98 3 3
Staphylococcus_aureus_subsp._aureus_TW20 3 3
Staphylococcus_aureus_subsp._aureus_55/2053 3 3
Staphylococcus_aureus_subsp._aureus_TCH60 3 3
Staphylococcus_aureus_subsp._aureus_str._JKD6008 3 3
Staphylococcus_aureus_subsp._aureus_71193 3 3
Staphylococcus_aureus_subsp._aureus_S0385 3 3
Staphylococcus_aureus_subsp._aureus_str._Newman 3 3
Staphylococcus_aureus_subsp._aureus_Mu3 3 3
Staphylococcus_aureus_subsp._aureus_USA300_TCH1516 3 3
Staphylococcus_aureus_subsp._aureus_USA300_FPR3757 3 3
Staphylococcus_aureus_subsp._aureus_JH9 3 3
Staphylococcus_aureus_subsp._aureus_MSSA476 3 3
Staphylococcus_aureus_subsp._aureus_MRSA252 3 3
Staphylococcus_aureus_subsp._aureus_MW2 3 3
Staphylococcus_aureus_subsp._aureus_N315 3 3
Staphylococcus_aureus_subsp._aureus_Mu50 3 3
Staphylococcus_aureus_subsp._aureus_COL 3 3
Staphylococcus_aureus_subsp._aureus_NCTC_8325 4 3
Singulisphaera_acidiphila_DSM_18658 1 1
Thermotoga_maritima_MSB8 2 2
Fusobacterium_nucleatum_subsp._vincentii_3_1_36A2 2 2
Fusobacterium_nucleatum_subsp._animalis_4_8 2 2
Desulfocapsa_sulfexigens_DSM_10523 1 1
Desulfovibrio_hydrothermalis_AM13_=_DSM_14728 4 4
Desulfovibrio_vulgaris_RCH1 2 2
Desulfovibrio_vulgaris_str._'Miyazaki_F' 2 2
Desulfovibrio_vulgaris_str._Hildenborough 2 2
Sorangium_cellulosum_So0157-2 1 1
Burkholderia_phenoliruptrix_BR3459a 1 1
Ralstonia_pickettii_12J 1 1
Burkholderia_sp._YI23 3 3
Burkholderia_sp._CCGE1001 1 1
Burkholderia_sp._KJ006 1 1
Burkholderia_thailandensis_MSMB121 2 2
Burkholderia_pseudomallei_MSHR305 2 2
Burkholderia_pseudomallei_NCTC_13179 2 2
Burkholderia_pseudomallei_BPC006 2 2
Burkholderia_pseudomallei_1026b 2 2
Burkholderia_pseudomallei_MSHR346 1 1
Burkholderia_pseudomallei_668 2 2
Burkholderia_pseudomallei_1710b 2 2
Burkholderia_pseudomallei_K96243 2 2
Burkholderia_mallei_NCTC_10229 1 1
Burkholderia_mallei_NCTC_10247 1 1
Burkholderia_mallei_ATCC_23344 2 2
Burkholderia_lata 1 1
Burkholderia_cenocepacia_MC0-3 1 1
Burkholderia_cenocepacia_AU_1054 1 1
Burkholderia_cenocepacia_J2315 1 1
Burkholderia_multivorans_ATCC_17616 1 1
Nitrosomonas_sp._AL212 1 1
Octadecabacter_antarcticus_307 1 1
Octadecabacter_arcticus_238 2 2
Rhodospirillum_rubrum_ATCC_11170 2 2
Gluconacetobacter_diazotrophicus_PAl_5 1 1
Gluconobacter_oxydans_H24 2 2
Methylobacterium_extorquens_DM4 1 1
Methylobacterium_extorquens_PA1 1 1
Brucella_ceti_TE10759-12 2 2
Brucella_ceti_TE28753-12 1 1
Brucella_canis_HSK_A52141 2 2
Brucella_melitensis_NI 2 2
Brucella_melitensis_M5-90 2 2
Brucella_melitensis_M28 2 2
Brucella_melitensis_bv._1_str._16M 2 2
Brucella_abortus_A13334 2 2
Sinorhizobium_fredii_USDA_257 4 4
Sinorhizobium_fredii_HH103 3 3
Sinorhizobium_meliloti_2011 3 3
Sinorhizobium_meliloti_GR4 3 3
Sinorhizobium_meliloti_Rm41 3 3
Sinorhizobium_meliloti_SM11 3 3
Sinorhizobium_meliloti_BL225C 3 3
Sinorhizobium_meliloti_1021 3 3
Rhizobium_etli_CFN_42 2 2
Rhizobium_etli_bv._mimosae_str._Mim1 2 2
Rhizobium_tropici_CIAT_899 3 3
Rhizobium_leguminosarum_bv._trifolii_WSM2304 2 2
Rhizobium_leguminosarum_bv._trifolii_WSM1325 5 5
Mesorhizobium_australicum_WSM2073 3 3
Bradyrhizobium_oligotrophicum_S58 1 1
Bradyrhizobium_japonicum_USDA_6 1 1
Simiduia_agarivorans_SA1_=_DSM_21679 1 1
Mannheimia_succiniciproducens_MBEL55E 1 1
Mannheimia_haemolytica_USMARC_2286 1 1
Mannheimia_haemolytica_M42548 1 1
Mannheimia_haemolytica_D174 1 1
Mannheimia_haemolytica_D171 1 1
Mannheimia_haemolytica_D153 1 1
Mannheimia_haemolytica_USDA-ARS-USMARC-183 1 1
Mannheimia_haemolytica_USDA-ARS-USMARC-185 1 1
Pasteurella_multocida_36950 1 1
Pasteurella_multocida_subsp._multocida_str._HN06 1 1
Pasteurella_multocida_subsp._multocida_str._Pm70 1 1
Actinobacillus_suis_H91-0380 1 1
Actinobacillus_pleuropneumoniae_serovar_3_str._JL03 1 1
Actinobacillus_pleuropneumoniae_serovar_7_str._AP76 1 1
Aeromonas_hydrophila_ML09-119 1 1
Vibrio_parahaemolyticus_BB22OP 1 1
Vibrio_alginolyticus_NBRC_15630_=_ATCC_17749 1 1
Vibrio_nigripulchritudo_VibrioScope 1 1
Alcanivorax_dieselolei_B5 1 1
Stenotrophomonas_maltophilia_D457 1 1
Stenotrophomonas_maltophilia_JV3 1 1
Stenotrophomonas_maltophilia_R551-3 1 1
Xanthomonas_citri_subsp._citri_Aw12879 1 1
Xanthomonas_campestris_pv._vesicatoria_str._85-10 1 1
Xanthomonas_axonopodis_pv._citrumelo_F1 1 1
Xanthomonas_axonopodis_Xac29-1 1 1
Xanthomonas_campestris_pv._raphani_756C 1 1
Xanthomonas_campestris_pv._campestris_str._8004 1 1
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 1 1
Legionella_pneumophila_str._Paris 1 1
Legionella_pneumophila_str._Lens 1 1
Legionella_pneumophila_subsp._pneumophila_LPE509 1 1
Legionella_pneumophila_subsp._pneumophila_str._Thunder_Bay 1 1
Legionella_pneumophila_subsp._pneumophila_str._Philadelphia_1 1 1
Legionella_pneumophila_subsp._pneumophila 1 1
Legionella_pneumophila_subsp._pneumophila 1 1
Legionella_pneumophila_subsp._pneumophila_ATCC_43290 1 1
Legionella_pneumophila_2300/99_Alcoy 1 1
Proteus_mirabilis_BB2000 2 2
Edwardsiella_tarda_C07-087 1 1
Rahnella_aquatilis_HX2 1 1
Yersinia_pseudotuberculosis_PB1/+ 1 1
Yersinia_pseudotuberculosis_YPIII 1 1
Yersinia_pseudotuberculosis_IP_32953 1 1
Yersinia_pestis_biovar_Microtus_str._91001 1 1
Yersinia_pestis_A1122 1 1
Yersinia_pestis_Z176003 1 1
Yersinia_pestis_D182038 1 1
Yersinia_pestis_D106004 1 1
Yersinia_pestis_biovar_Medievalis_str._Harbin_35 1 1
Yersinia_pestis_Nepal516 1 1
Yersinia_pestis_Antiqua 1 1
Yersinia_pestis_Angola 1 1
Yersinia_pestis_CO92 1 1
Yersinia_pestis_KIM10+ 1 1
Yersinia_enterocolitica_subsp._palearctica_105.5R(r) 1 1
Yersinia_enterocolitica_subsp._palearctica_Y11 1 1
Serratia_sp._AS13 1 1
Serratia_plymuthica_S13 1 1
Serratia_plymuthica_4Rx13 1 1
Serratia_marcescens_FGI94 2 2
Serratia_marcescens_WW4 2 2
Serratia_liquefaciens_ATCC_27592 1 1
Pectobacterium_carotovorum_subsp._carotovorum_PCC21 1 1
Pantoea_ananatis_LMG_5342 1 1
Pantoea_ananatis_PA13 1 1
Pantoea_ananatis_AJ13355 1 1
Cronobacter_sakazakii_CMCC_45402 1 1
Cronobacter_sakazakii_SP291 1 1
Cronobacter_sakazakii_ATCC_BAA-894 3 3
Raoultella_ornithinolytica_B6 2 2
Shigella_flexneri_2002017 1 1
Shigella_flexneri_2a_str._2457T 1 1
Shigella_flexneri_2a_str._301 1 1
Shigella_boydii_Sb227 1 1
Klebsiella_oxytoca_KCTC_1686 1 1
Klebsiella_pneumoniae_JM45 2 2
Klebsiella_pneumoniae_CG43 2 2
Klebsiella_pneumoniae_KCTC_2242 2 2
Klebsiella_pneumoniae_342 2 2
Klebsiella_pneumoniae_subsp._pneumoniae_1084 1 1
Klebsiella_pneumoniae_subsp._pneumoniae_HS11286 2 2
Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578 2 2
Klebsiella_pneumoniae_subsp._rhinoscleromatis_SB3432 2 2
Enterobacter_aerogenes_EA1509E 2 2
Escherichia_coli_E24377A 1 1
Escherichia_coli_E._coli_PMV-1 2 2
Escherichia_coli_JJ1886 1 1
Escherichia_coli_LY180 1 1
Escherichia_coli_APEC_O78 1 1
Escherichia_coli_O7:K1_str._CE10 1 1
Escherichia_coli_O104:H4_str._2009EL-2050 1 1
Escherichia_coli_O104:H4_str._2009EL-2071 1 1
Escherichia_coli_O104:H4_str._2011C-3493 1 1
Escherichia_coli_NA114 1 1
Escherichia_coli_P12b 1 1
Escherichia_coli_str._'clone_D_i2' 1 1
Escherichia_coli_str._'clone_D_i14' 1 1
Escherichia_coli_UM146 2 2
Escherichia_coli_042 1 1
Escherichia_coli_Xuzhou21 1 1
Escherichia_coli_IHE3034 2 2
Escherichia_coli_UMNK88 1 1
Escherichia_coli_O83:H1_str._NRG_857C 2 2
Escherichia_coli_ABU_83972 1 1
Escherichia_coli_KO11FL 1 1
Escherichia_coli_KO11FL 1 1
Escherichia_coli_LF82 2 2
Escherichia_coli_ED1a 1 1
Escherichia_coli_IAI39 1 1
Escherichia_coli_UMN026 1 1
Escherichia_coli_55989 1 1
Escherichia_coli_S88 1 1
Escherichia_coli_IAI1 1 1
Escherichia_coli_W 1 1
Escherichia_coli_W 1 1
Escherichia_coli_DH1 1 1
Escherichia_coli_DH1 1 1
Escherichia_coli_ATCC_8739 1 1
Escherichia_coli_BL21(DE3) 1 1
Escherichia_coli_BL21(DE3) 1 1
Escherichia_coli_SMS-3-5 2 2
Escherichia_coli_SE15 1 1
Escherichia_coli_SE11 1 1
Escherichia_coli_APEC_O1 2 2
Escherichia_coli_O103:H2_str._12009 1 1
Escherichia_coli_UTI89 2 2
Escherichia_coli_536 1 1
Escherichia_coli_HS 1 1
Escherichia_coli_ETEC_H10407 1 1
Escherichia_coli_O55:H7_str._RM12579 1 1
Escherichia_coli_O55:H7_str._CB9615 1 1
Escherichia_coli_O26:H11_str._11368 1 1
Escherichia_coli_CFT073 1 1
Escherichia_coli_O111:H-_str._11128 1 1
Escherichia_coli_O127:H6_str._E2348/69 1 1
Escherichia_coli_O157:H7_str._Sakai 1 1
Escherichia_coli_O157:H7_str._EDL933 1 1
Escherichia_coli_str._K-12_substr._MDS42 1 1
Escherichia_coli_BW2952 1 1
Escherichia_coli_str._K-12_substr._MG1655 1 1
Escherichia_coli_str._K-12_substr._W3110 1 1
Escherichia_coli_str._K-12_substr._DH10B 1 1
Escherichia_coli_B_str._REL606 1 1
Enterobacter_cloacae_SCF1 3 3
Enterobacter_cloacae_EcWSU1 1 1
Enterobacter_cloacae_subsp._cloacae_ENHKU01 1 1
Enterobacter_cloacae_subsp._cloacae_NCTC_9394 1 1
Enterobacter_cloacae_subsp._cloacae_ATCC_13047 1 1
Azotobacter_vinelandii_CA6 1 1
Azotobacter_vinelandii_CA 1 1
Pseudomonas_denitrificans_ATCC_13867 1 1
Pseudomonas_syringae_pv._phaseolicola_1448A 1 1
Pseudomonas_syringae_pv._syringae_B728a 1 1
Pseudomonas_fluorescens_A506 1 1
Pseudomonas_aeruginosa_SCV20265 1 1
Pseudomonas_aeruginosa_MTB-1 1 1
Pseudomonas_aeruginosa_LES431 1 1
Pseudomonas_aeruginosa_RP73 1 1
Pseudomonas_aeruginosa_B136-33 1 1
Pseudomonas_aeruginosa_PA1R 1 1
Pseudomonas_aeruginosa_PA1 1 1
Pseudomonas_aeruginosa_DK2 1 1
Pseudomonas_aeruginosa_NCGM2.S1 1 1
Pseudomonas_aeruginosa_M18 1 1
Pseudomonas_aeruginosa_LESB58 1 1
Pseudomonas_aeruginosa_PA7 1 1
Pseudomonas_aeruginosa_PAO1 1 1
Methylophaga_sp._JAM7 1 1
Haloquadratum_walsbyi_C23 1 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   1 1
Pan_troglodytes_69_2.1.4   (Chimpanzee)   1 1
Gorilla_gorilla_69_3.1   (Western gorilla)   1 1
Pongo_abelii_69_2   (Sumatran orangutan)   1 1
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   1 1
Macaca_mulatta_69_1   (Rhesus monkey)   1 1
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   1 1
Otolemur_garnettii_69_3   (Small-eared galago)   1 1
Microcebus_murinus_69_1   (Gray mouse lemur)   1 1
Rattus_norvegicus_69_3.4   (Norway rat)   1 1
Mus_musculus_69_38   (House mouse)   1 1
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   1 1
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   1 1
Cavia_porcellus_69_3   (Domestic guinea pig)   1 1
Oryctolagus_cuniculus_69_2   (Rabbit)   1 1
Ochotona_princeps_69   (American pika)   1 1
Sus_scrofa_69_10.2   (Pig)   1 1
Bos_taurus_69_3.1   (Cattle)   1 1
Vicugna_pacos_69_1   (Alpaca)   2 1
Tursiops_truncatus_69_1   (Bottlenose dolphin)   1 1
Mustela_putorius_furo_69_1.0   (Domestic ferret)   1 1
Ailuropoda_melanoleuca_69_1   (Giant panda)   1 1
Canis_familiaris_69_3.1   (Dog)   1 1
Equus_caballus_69_2   (Horse)   1 1
Myotis_lucifugus_69_2.0   (Little brown bat)   1 1
Pteropus_vampyrus_69_1   (Large flying fox)   1 1
Sorex_araneus_69_1   (European shrew)   1 1
Erinaceus_europaeus_69   (Western European hedgehog)   2 1
Procavia_capensis_69_1   (Cape rock hyrax)   1 1
Loxodonta_africana_69_3   (African savanna elephant)   1 1
Echinops_telfairi_69   (Small Madagascar hedgehog)   1 1
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   1 1
Macropus_eugenii_69_1.0   (Tammar wallaby)   1 1
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   1 1
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   1 1
Ornithorhynchus_anatinus_69_5   (Platypus)   1 1
Petromyzon_marinus_69_7.0   (Sea lamprey)   1 1
Meleagris_gallopavo_69_2   (Turkey)   1 1
Gallus_gallus_69_2   (Chicken)   1 1
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   1 1
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   1 1
Anolis_carolinensis_69_2.0   (Green anole)   1 1
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   1 1
Latimeria_chalumnae_69_1   (Coelacanth)   1 1
Gadus_morhua_69_1   (Atlantic cod)   1 1
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   1 1
Takifugu_rubripes_69_4   (Torafugu)   1 1
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   1 1
Oryzias_latipes_69_1   (Japanese medaka)   1 1
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   1 1
Oreochromis_niloticus_69_1.0   (Nile tilapia)   1 1
Danio_rerio_69_9   (Zebrafish)   1 1
Ciona_intestinalis_69   (Vase tunicate)   1 1
Caenorhabditis_elegans_69_215   (Roundworm)   1 1
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   2 2
Arabidopsis_thaliana_10   (Thale cress)   2 2

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   4 4
Homo_sapiens__(NCBI_version)   (Human)   1 1
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   1 1
Loa_loa_v3.3_(Request)   (Eye worm)   1 1
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   1 1
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   1 1
Moniliophthora_perniciosa_FA553__(Genome_survey) 1 1
Lotus_japonicus__(Early_assembly) 6 6
Malus_x_domestica_(Duplicate)   (Apple)   5 5
Ricinus_communis__(Early_assembly)   (Castor bean)   1 1
Nicotiana_benthamiana_0.4.4_(Early_draft) 2 2
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   1 1
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   1 1
Phoenix_dactylifera__(Early_draft)   (Date palm)   1 1
Acholeplasma_laidlawii_PG-8A_(duplicate) 9 9
Mycobacterium_tuberculosis_H37Rv_(Duplicate_of_ex) 1 1
NCBI_plasmid_sequences_(Plasmids) 62 62
Uniprot_2018_03_genome 33804 33753
Protozoadb_2010_08_(Protozoadb) 6 6
NCBI_2017_08_genome 165599 165514
Protein_Data_Bank_(all_PDB_sequenc) 62 62
TargetDB__(Targets) 62 62
PDB_chains_(SCOP_1.75)_(PDB) 7 7
NCBI_viral_sequences_(Viral) 2 2
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 271 271
STRING_v9.0.5_(STRING) 1469 1468

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.