SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain combinations for DPY module superfamily in groups of genomes

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a DPY module domain in that genome.

Complete genomes
Genome     Number   Proteins
Danaus_plexippus_OGS1.0   (Monarch butterfly)   47 1
Heliconius_melpomene_   (Postman butterfly)   27 1
Bombyx_mori_   (Domestic silkworm)   43 5
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   61 19
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   36 1
Linepithema_humile_v1.1   (Argentine ant)   42 2
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   47 5
Solenopsis_invicta_v.2.2.3   (Red fire ant)   36 4
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   36 1
Atta_cephalotes_v1.1 15 3
Camponotus_floridanus_v3.3   (Florida carpenter ant)   36 2
Lucilia_cuprina   (Australian sheep blowfly)   68 3
Drosophila_grimshawi_1.3 11 2
Drosophila_willistoni_1.3 8 2
Drosophila_pseudoobscura_2.13 43 2
Drosophila_persimilis_1.3 5 3
Drosophila_suzukii 47 2
Drosophila_yakuba_1.3 2 2
Drosophila_simulans_1.3 26 2
Drosophila_sechellia_1.3 39 2
Drosophila_melanogaster_76_5   (Fruit fly)   577 19
Drosophila_erecta_1.3 3 2
Drosophila_ananassae_1.3 1 1
Drosophila_virilis_1.2 52 2
Drosophila_mojavensis_1.3 13 2
Megaselia_scalaris_22 31 5
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   43 2
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   67 3
Anopheles_darlingi_22   (American malaria mosquito)   6 1
Anopheles_gambiae_49_3j   (African malaria mosquito)   23 2
Tribolium_castaneum_3.0   (Red flour beetle)   68 1
Rhodnius_prolixus_22 12 2
Daphnia_pulex_   (Common water flea)   25 4

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Strains
Genome     Number   Proteins
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   48 4
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   23 2

Longest transcript per gene
Genome     Number   Proteins
Drosophila_melanogaster_69_5   (Fruit fly)   46 2

Others
Genome     Number   Proteins
Heliconius_numata__(Incomplete) 6 6
STRING_v9.0.5_(STRING) 379 28
Uniprot_2018_03_genome 10774 802
NCBI_2017_08_genome 19349 605
PDB_chains_(SCOP_1.75)_(PDB) 1 1
Protein_Data_Bank_(all_PDB_sequenc) 1 1
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 2 2

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]