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"fungi" superfamily assignments
Taxonomy
Taxonomy browser entry
Eukaryota; Opisthokonta; Fungi
Descendants list: C24, p4, cf, aIM, Mmm, TT, SL, PC, ao, nx, Sw, vd, KRs, AM, qb, h5J, n1, iz, q0, n2, qi, TP, X4q, b9, Sc, rAM, Sr, vw, q5, Sx, 4IZ, b8, AR, t3, um, al, a8, AB, b7, K5N, lz, AC, ur, hg, 1ba, i4, ns, lo, ztx, re, gr, Sh, lq, wfR, ym, Sm, GfC, dox, kl, mWg, ql, i5, Sj, 6z5, ST, Sq, n3, n4, Sa, xs, Sd, fv, Su, im, qo, j2, qj, vXE, t4, ly, t9, lth, q2, R0R, 90j, EPt, oVw, ia, an, gz, ul, Sl, Se, rXi, ik, po, fc, iUF, kw, hk, a7, fg, txD, Sg, zi, qa, yo, i7, So, Fm1, gi, or, nq, a5, if, ig, KZp, Rcy, Sj2, St, FSZ, iu, hj, PM, IA4, TR, q4, qc, Sn, zk, yl, Sb, o7, qn, yv, t6, Sp, nd, UlW, q9, VL4, qxC, TV, Owf, ry, q1, PO, Ss, Mv, y4, RxS, gp, HlW, ve, qYv, go, hn, gq, NX7, hfv, nj, x6l, PP, LLd, CUl, PCo, CD, Sz, dUP, iv, 0Rm, urB, ip, y6, 7ko, TM, ng, Sv, wc, zmD, y8, nh, GrQ, yu, t7, l5, qg, qe, rzm, iw, y1, fo, 3Ju, fm, A8o, o9, yz, 6mX, l3, q7, Sk, gl, WIB, i0v, q8, yj, i6, yh, fu6, i3, wt, dh, bU9, q3, Sf, zc, q6
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Trees by TreeVector A presence/absence matrix is generated using protein domain architecture data for all genomes in SUPERFAMILY. The PAUP software is used to produce a single, large tree topology using heuristic parsimony methods. Genome combinations, or specific clades, can be displayed as if individual trees had been produced. However, this data is extracted from the single large tree. This produces a higher quality topology than if the trees had been produced on their own, and allows the trees to be displayed instantly.
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Assignment statistics
Ancestral node not found. At this point we only provide Eukaryote ancestral nodes so if you requested something else, please give up now. Otherwise, this might be a bug, or an old link.
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Superfamily assignments
Domains | Proteins | Families | SCOP link | Superfamilies |
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