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Domain combination pairs in Clostridium botulinum A3 str. Loch Maree

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

  • For a list of unique full length architectures for this genome click here (can be slow).
Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

675 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 3314
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 325
CheY-like C-terminal effector domain of the bipartite response regulators 222
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 183
Actin-like ATPase domain Actin-like ATPase domain 184
Homeodomain-like Homeodomain-like 156
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 152
Sensory domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 143
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 142
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 142
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 124
Calcium ATPase, transduction domain A HAD-like 124
HAD-like Calcium ATPase, transmembrane domain M 124
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 118
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 104
P-loop containing nucleoside triphosphate hydrolases Translation proteins 97
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 86
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 84
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 81
"Winged helix" DNA-binding domain PLP-dependent transferases 71
PYP-like sensor domain (PAS domain) Homeodomain-like 76
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 76
cAMP-binding domain-like "Winged helix" DNA-binding domain 71
Homeodomain-like Probable bacterial effector-binding domain 72
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 71
Homeodomain-like SIS domain 71
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 61
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 61
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 61
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 61
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 65
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 64
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 66
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 63
Translation proteins EF-G C-terminal domain-like 65
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 61
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 55
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 52
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 54
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 52
Alpha-L RNA-binding motif Pseudouridine synthase 51
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 51
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 52
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 51
Class II aaRS and biotin synthetases Class II aaRS ABD-related 54
Putative DNA-binding domain Probable bacterial effector-binding domain 51
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 52
alpha-helical ferredoxin Nucleotide-binding domain 54
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 54
P-loop containing nucleoside triphosphate hydrolases MOP-like 51
EF-G C-terminal domain-like EF-G C-terminal domain-like 54
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 53
lambda repressor-like DNA-binding domains RmlC-like cupins 51
PTS-regulatory domain, PRD PTS-regulatory domain, PRD 53
4Fe-4S ferredoxins Fe-only hydrogenase 54
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 43
Metallo-hydrolase/oxidoreductase Flavoproteins 41
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 42
PLP-binding barrel Alanine racemase C-terminal domain-like 41
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 42
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 41
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 42
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 43
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 42
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 41
PurM N-terminal domain-like PurM C-terminal domain-like 42
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 43
4Fe-4S ferredoxins Radical SAM enzymes 41
Nucleic acid-binding proteins Nucleic acid-binding proteins 44
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 42
TPR-like TPR-like 44
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 43
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 43
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 42
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 42
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 32
Glucose permease domain IIB Duplicated hybrid motif 32
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 31
tRNA-binding arm Class II aaRS and biotin synthetases 31
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 32
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 32
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
P-loop containing nucleoside triphosphate hydrolases ACT-like 32
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 31
Regulatory protein AraC Homeodomain-like 32
RuvA domain 2-like Nucleic acid-binding proteins 33
Flavoproteins 4Fe-4S ferredoxins 31
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 32
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 32
SacY-like RNA-binding domain PTS-regulatory domain, PRD 31
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 31
GroES-like NAD(P)-binding Rossmann-fold domains 31
FKBP-like Triger factor/SurA peptide-binding domain-like 33
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 32
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 32
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 32
(Trans)glycosidases Glycosyl hydrolase domain 32
Translation proteins Ribosomal protein S5 domain 2-like 32
PreATP-grasp domain Rudiment single hybrid motif 32
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 32
GAF domain-like Homeodomain-like 32
Aldolase AFP III-like domain 31
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 32
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 33
Nucleotide-diphospho-sugar transferases TPR-like 33
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 31
lambda repressor-like DNA-binding domains TPR-like 33
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 33
Carbamate kinase-like ACT-like 31
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 31
ACT-like ACT-like 31
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 32
Thiolase-like Thiolase-like 31
4Fe-4S ferredoxins P-loop containing nucleoside triphosphate hydrolases 21
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 21
Nitrite/Sulfite reductase N-terminal domain-like 4Fe-4S ferredoxins 21
TK C-terminal domain-like 4Fe-4S ferredoxins 21
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 4Fe-4S ferredoxins 21
(Trans)glycosidases Carbohydrate binding domain 22
CBS-domain pair FAD-binding/transporter-associated domain-like 21
4Fe-4S ferredoxins DHS-like NAD/FAD-binding domain 21
Nucleotide-diphospho-sugar transferases UDP-Glycosyltransferase/glycogen phosphorylase 22
MoeA N-terminal region -like MoeA C-terminal domain-like 22
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 22
"Winged helix" DNA-binding domain Chorismate lyase-like 21
LysM domain LysM domain 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
GreA transcript cleavage protein, N-terminal domain FKBP-like 21
(Trans)glycosidases Cyclophilin-like 21
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 22
Collagen-binding domain Collagen-binding domain 22
GAF domain-like "Winged helix" DNA-binding domain 22
RuvA domain 2-like BRCT domain 22
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 21
Nucleotide cyclase HD-domain/PDEase-like 22
SirA-like DsrEFH-like 22
PYP-like sensor domain (PAS domain) Nucleotide cyclase 22
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 21
FAD/NAD-linked reductases, dimerisation (C-terminal) domain Rhodanese/Cell cycle control phosphatase 22
TK C-terminal domain-like Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 21
Nucleotidylyl transferase Alpha-L RNA-binding motif 21
4Fe-4S ferredoxins Nitrite and sulphite reductase 4Fe-4S domain-like 21
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 21
NAD(P)-linked oxidoreductase alpha-helical ferredoxin 21
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 21
Metalloproteases ("zincins"), catalytic domain Clostridium neurotoxins, "coiled-coil" domain 22
Lysozyme-like beta-lactamase/transpeptidase-like 22
Class I glutamine amidotransferase-like LD-carboxypeptidase A C-terminal domain-like 21
Rubredoxin-like Ferritin-like 22
Class II aaRS and biotin synthetases SufE/NifU 21
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 22
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 22
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 21
4Fe-4S ferredoxins PYP-like sensor domain (PAS domain) 21
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 21
CheC-like Surface presentation of antigens (SPOA) 22
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 22
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 22
DNA clamp DNA clamp 21
alpha-helical ferredoxin alpha-helical ferredoxin 22
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 21
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 21
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
"Winged helix" DNA-binding domain TrkA C-terminal domain-like 21
Clostridium neurotoxins, "coiled-coil" domain Concanavalin A-like lectins/glucanases 22
4Fe-4S ferredoxins Adenine nucleotide alpha hydrolases-like 21
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 22
Formyltransferase FMT C-terminal domain-like 21
Metalloproteases ("zincins"), catalytic domain Concanavalin A-like lectins/glucanases 22
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 22
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 22
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 22
(Trans)glycosidases Chitinase insertion domain 22
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 21
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 21
CBS-domain pair P-loop containing nucleoside triphosphate hydrolases 22
L30e-like alpha/beta knot 21
GAF domain-like PYP-like sensor domain (PAS domain) 21
FAD/NAD(P)-binding domain HI0933 insert domain-like 21
Thiamin diphosphate-binding fold (THDP-binding) 4Fe-4S ferredoxins 21
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 22
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 21
FAD/NAD(P)-binding domain Rhodanese/Cell cycle control phosphatase 22
Nucleotide-binding domain Nucleotide-binding domain 22
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 22
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
HMA, heavy metal-associated domain HAD-like 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 21
MetI-like Periplasmic binding protein-like II 21
Translation proteins SH3-like domain Nucleic acid-binding proteins 22
"Winged helix" DNA-binding domain PTS-regulatory domain, PRD 22
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 22
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 22
MgtE N-terminal domain-like CBS-domain pair 22
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Nucleic acid-binding proteins HD-domain/PDEase-like 21
Fe-only hydrogenase PYP-like sensor domain (PAS domain) 21
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 21
Ribonuclease H-like Nucleic acid-binding proteins 22
Ribonuclease H-like RuvA domain 2-like 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 11
YrdC/RibB RibA-like 11
ParB/Sulfiredoxin KorB DNA-binding domain-like 11
2Fe-2S ferredoxin-like CO dehydrogenase molybdoprotein N-domain-like 11
DHS-like NAD/FAD-binding domain Rubredoxin-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
"Winged helix" DNA-binding domain PRTase-like 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
Glutathione synthetase ATP-binding domain-like MurD-like peptide ligases, catalytic domain 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
FAD/NAD-linked reductases, dimerisation (C-terminal) domain SirA-like 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
PYP-like sensor domain (PAS domain) HD-domain/PDEase-like 11
Acyl-CoA dehydrogenase NM domain-like DHS-like NAD/FAD-binding domain 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
E set domains E set domains 11
YojJ-like RuvA domain 2-like 11
Aconitase iron-sulfur domain LeuD/IlvD-like 11
PDZ domain-like ClpP/crotonase 11
Homeodomain-like (Trans)glycosidases 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
Tex N-terminal region-like RuvA domain 2-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
Acyl-CoA dehydrogenase NM domain-like Rubredoxin-like 11
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
Phospholipase D/nuclease Phospholipase D/nuclease 11
Aldolase post-HMGL domain-like 11
FAD/NAD(P)-binding domain ISP domain 11
LysM domain (Trans)glycosidases 11
PIN domain-like Ribonuclease H-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
RmlC-like cupins (Trans)glycosidases 11
Zinc beta-ribbon DNA primase core 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
F1F0 ATP synthase subunit C F1F0 ATP synthase subunit C 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
Molybdenum cofactor biosynthesis proteins CinA-like 11
Ribonuclease H-like BRCT domain 11
"Winged helix" DNA-binding domain NAD(P)-binding Rossmann-fold domains 11
CO dehydrogenase ISP C-domain like CO dehydrogenase molybdoprotein N-domain-like 11
RmlC-like cupins Glycosyl hydrolase domain 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
Dihydropteroate synthetase-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 11
Chitinase insertion domain Carbohydrate-binding domain 11
Phosphoenolpyruvate/pyruvate domain Homeodomain-like 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Thioredoxin-like Nqo1 middle domain-like 11
HPr-like PYP-like sensor domain (PAS domain) 11
Cysteine proteinases PGBD-like 11
P-loop containing nucleoside triphosphate hydrolases PTS system fructose IIA component-like 11
Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain 11
PGBD-like LysM domain 11
Aldolase Single hybrid motif 11
Folate-binding domain Aminomethyltransferase beta-barrel domain 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
post-HMGL domain-like Single hybrid motif 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
GroEL equatorial domain-like GroEL apical domain-like 11
"Winged helix" DNA-binding domain PTS system IIB component-like 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
Sec-C motif Creatinase/aminopeptidase 11
Thioredoxin-like 4Fe-4S ferredoxins 11
(Trans)glycosidases E set domains 11
PheT/TilS domain Putative DNA-binding domain 11
TrpR-like TrpR-like 11
CbiG N-terminal domain-like CobE/GbiG C-terminal domain-like 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
P-loop containing nucleoside triphosphate hydrolases LexA/Signal peptidase 11
CheY-binding domain of CheA CheW-like 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Nucleotide-diphospho-sugar transferases Guanosine diphospho-D-mannose pyrophosphorylase/mannose-6-phosphate isomerase linker domain 11
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 11
Putative DNA-binding domain Antibiotic binding domain of TipA-like multidrug resistance regulators 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Nqo1 FMN-binding domain-like alpha-helical ferredoxin 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
Kelch motif Zn-dependent exopeptidases 11
PDZ domain-like Radical SAM enzymes 11
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 11
Trypsin-like serine proteases PDZ domain-like 11
"Winged helix" DNA-binding domain Acyl-CoA N-acyltransferases (Nat) 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
PreATP-grasp domain Single hybrid motif 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
Dihydropteroate synthetase-like Methionine synthase domain 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Rhodanese/Cell cycle control phosphatase DsrEFH-like 11
CO dehydrogenase ISP C-domain like Molybdenum cofactor-binding domain 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
PK C-terminal domain-like Phosphohistidine domain 11
TGS-like Class II aaRS ABD-related 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 11
MoeA C-terminal domain-like Periplasmic binding protein-like II 11
LysM domain PR-1-like 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
CheY-binding domain of CheA ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
L,D-transpeptidase pre-catalytic domain-like L,D-transpeptidase catalytic domain-like 11
RmlC-like cupins Homeodomain-like 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Trigger factor ribosome-binding domain FKBP-like 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
L,D-transpeptidase catalytic domain-like PGBD-like 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Translation proteins "Winged helix" DNA-binding domain 11
YjeF N-terminal domain-like Ribokinase-like 11
LysM domain Zn-dependent exopeptidases 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
"Winged helix" DNA-binding domain Phoshotransferase/anion transport protein 11
"Winged helix" DNA-binding domain HRDC-like 11
PTS system fructose IIA component-like PTS IIb component 11
Thiamin pyrophosphokinase, catalytic domain Thiamin pyrophosphokinase, substrate-binding domain 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
FliG FliG 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 11
S-adenosyl-L-methionine-dependent methyltransferases P-loop containing nucleoside triphosphate hydrolases 11
PTS system IIB component-like Phoshotransferase/anion transport protein 11
L domain-like L domain-like 11
PGBD-like Zn-dependent exopeptidases 11
GyrA/ParC C-terminal domain-like GyrA/ParC C-terminal domain-like 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
lambda repressor-like DNA-binding domains LexA/Signal peptidase 11
PK beta-barrel domain-like PK C-terminal domain-like 11
ARM repeat Nucleotidylyl transferase 11
RuvA domain 2-like RuvA domain 2-like 11
HD-domain/PDEase-like Nucleotidylyl transferase 11
Nucleotide cyclase EAL domain-like 11
"Winged helix" DNA-binding domain PTS system fructose IIA component-like 11
Class II aaRS ABD-related C-terminal domain of ProRS 11
Zinc beta-ribbon Zinc beta-ribbon 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
ThrRS/AlaRS common domain P-loop containing nucleoside triphosphate hydrolases 11
PTS-regulatory domain, PRD PTS system fructose IIA component-like 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
Serine metabolism enzymes domain ACT-like 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
beta-lactamase/transpeptidase-like Penicillin-binding protein 2x (pbp-2x), c-terminal domain 11
HprK N-terminal domain-like DHH phosphoesterases 11
Cysteine proteinases DPP6 N-terminal domain-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Aldehyde ferredoxin oxidoreductase, N-terminal domain Aldehyde ferredoxin oxidoreductase, C-terminal domains 11
PUA domain-like alpha/beta knot 11
Translation proteins PRC-barrel domain 11
Single hybrid motif CoA-dependent acyltransferases 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
Tetrapyrrole methylase all-alpha NTP pyrophosphatases 11
PreATP-grasp domain post-HMGL domain-like 11
Putative DNA-binding domain Putative DNA-binding domain 11
PKD domain Collagen-binding domain 11
Tex N-terminal region-like Ribonuclease H-like 11
Nucleic acid-binding proteins PheT/TilS domain 11
ACT-like PYP-like sensor domain (PAS domain) 11
Nqo1C-terminal domain-like 4Fe-4S ferredoxins 11
"Winged helix" DNA-binding domain Ribokinase-like 11
HD-domain/PDEase-like TGS-like 11
Translation proteins Translation proteins 11
GroEL-intermediate domain like GroEL apical domain-like 11
RuvA domain 2-like P-loop containing nucleoside triphosphate hydrolases 11
Ribonuclease H-like DNA/RNA polymerases 11
Nqo1 middle domain-like Nqo1C-terminal domain-like 11
Penicillin binding protein dimerisation domain Penicillin-binding protein 2x (pbp-2x), c-terminal domain 11
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 11
Rudiment single hybrid motif post-HMGL domain-like 11
Translation proteins ThrRS/AlaRS common domain 11
HprK N-terminal domain-like PEP carboxykinase-like 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
"Winged helix" DNA-binding domain DnaD domain-like 11
RuvA domain 2-like JAB1/MPN domain 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 11
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 11
CBS-domain pair DHH phosphoesterases 11
FMN-linked oxidoreductases 4Fe-4S ferredoxins 11
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 11
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Ribosomal protein L6 Ribosomal protein L6 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Acylphosphatase/BLUF domain-like YrdC/RibB 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
PIN domain-like DNA/RNA polymerases 11
RNase III domain-like dsRNA-binding domain-like 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 11
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 11
Histidine-containing phosphotransfer domain, HPT domain CheW-like 11
Lysozyme-like Cysteine proteinases 11
Histidine-containing phosphotransfer domain, HPT domain Homodimeric domain of signal transducing histidine kinase 11
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 11
(Trans)glycosidases Fibronectin type III 11
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 11
Nucleotidylyl transferase Riboflavin kinase-like 11
Glutathione synthetase ATP-binding domain-like Aldolase 11
Molybdenum cofactor biosynthesis proteins Periplasmic binding protein-like II 11
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
Nucleotide-binding domain FAD-linked reductases, C-terminal domain 11
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 11
F1F0 ATP synthase subunit B, membrane domain V-type ATPase subunit E-like 11
Thioredoxin-like Nqo1 FMN-binding domain-like 11
HAMP domain-like PYP-like sensor domain (PAS domain) 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain "Winged helix" DNA-binding domain 11
TGS-like ACT-like 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
PreATP-grasp domain PreATP-grasp domain 11
Thioredoxin-like Six-hairpin glycosidases 11
Chitinase insertion domain E set domains 11
Histidine-containing phosphotransfer domain, HPT domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Obg GTP-binding protein N-terminal domain Obg GTP-binding protein C-terminal domain 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Glutathione synthetase ATP-binding domain-like Single hybrid motif 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
Class II aaRS and biotin synthetases Translation proteins 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 11
Carbohydrate binding domain Carbohydrate binding domain 11
Nucleotidyltransferase ACT-like 11
CBS-domain pair PYP-like sensor domain (PAS domain) 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
Homeodomain-like Glycosyl hydrolase domain 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
"Winged helix" DNA-binding domain CBS-domain pair 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
CarD-like TRCF domain-like 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
AbrB/MazE/MraZ-like GAF domain-like 11
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 11
Cysteine proteinases Cysteine proteinases 11
Creatinase/prolidase N-terminal domain Creatinase/prolidase N-terminal domain 11
Tropomyosin Cysteine proteinases 11
Zinc beta-ribbon N-terminal domain of DnaB helicase 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
CheY-like Methylesterase CheB, C-terminal domain 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 11
S-adenosyl-L-methionine-dependent methyltransferases DNA methylase specificity domain 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
S-adenosyl-L-methionine-dependent methyltransferases NAD(P)-binding Rossmann-fold domains 11
Concanavalin A-like lectins/glucanases STI-like 11
Cell wall binding repeat Cell wall binding repeat 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
DNA methylase specificity domain DNA methylase specificity domain 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
YWTD domain YWTD domain 11
"Winged helix" DNA-binding domain Putative transcriptional regulator TM1602, C-terminal domain 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
Rubredoxin-like Superoxide reductase-like 11
Nucleic acid-binding proteins GAD domain-like 11
Homodimeric domain of signal transducing histidine kinase CheW-like 11
PTS-regulatory domain, PRD PTS system IIB component-like 11
Thioredoxin-like NHL repeat 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 11
Rudiment single hybrid motif Aldolase 11
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 11
HD-domain/PDEase-like ACT-like 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
FMN-linked oxidoreductases alpha-helical ferredoxin 11
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 11
Glutathione synthetase ATP-binding domain-like MurD-like peptide ligases, peptide-binding domain 11
Thioredoxin-like Nqo1C-terminal domain-like 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
DNA/RNA polymerases HD-domain/PDEase-like 11
Nqo1 FMN-binding domain-like 4Fe-4S ferredoxins 11
"Winged helix" DNA-binding domain C-terminal domain of transcriptional repressors 11
CBS-domain pair Homeodomain-like 11
Zinc beta-ribbon P-loop containing nucleoside triphosphate hydrolases 11
Fucose-specific lectin Fucose-specific lectin 11
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
TGS-like ThrRS/AlaRS common domain 11
DAK1/DegV-like DhaL-like 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 11
Methyl-accepting chemotaxis protein (MCP) signaling domain Periplasmic binding protein-like II 11
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
EAL domain-like HD-domain/PDEase-like 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 11
Putative DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 11
Acyl-CoA dehydrogenase C-terminal domain-like Rubredoxin-like 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
HD-domain/PDEase-like ARM repeat 11
HPr-like Homeodomain-like 11
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 11
P-loop containing nucleoside triphosphate hydrolases SMR domain-like 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
Rhodanese/Cell cycle control phosphatase SirA-like 11
Glutathione synthetase ATP-binding domain-like post-HMGL domain-like 11
Sporulation response regulatory protein Spo0B ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
CBS-domain pair MgtE membrane domain-like 11
S-adenosyl-L-methionine-dependent methyltransferases Acyl-CoA N-acyltransferases (Nat) 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Histidine-containing phosphotransfer domain, HPT domain CheY-binding domain of CheA 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
ALDH-like Dehydroquinate synthase-like 11
HprK N-terminal domain-like CBS-domain pair 11
Hsp33 domain HSP33 redox switch-like 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
Pectin lyase-like Invasin/intimin cell-adhesion fragments 11
CcmK-like CcmK-like 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
"Winged helix" DNA-binding domain Class II aaRS and biotin synthetases 11
HPr-like P-loop containing nucleoside triphosphate hydrolases 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
Galactose mutarotase-like Six-hairpin glycosidases 11
Phospholipase D/nuclease P-loop containing nucleoside triphosphate hydrolases 11
Galactose mutarotase-like Galactose mutarotase-like 11
NAD(P)-binding Rossmann-fold domains ACT-like 11
MetI-like MetI-like 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
FAD/NAD-linked reductases, dimerisation (C-terminal) domain DsrEFH-like 11
"Winged helix" DNA-binding domain Iron-dependent repressor protein, dimerization domain 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
Chaperone J-domain HSP40/DnaJ peptide-binding domain 11
Sensory domain-like Nucleotide cyclase 11
Acetyl-CoA synthetase-like ACP-like 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
Bacillus cereus metalloprotein-like Bacillus cereus metalloprotein-like 11
DnaD domain-like DnaD domain-like 11
Protein kinase-like (PK-like) Penicillin-binding protein 2x (pbp-2x), c-terminal domain 11
Homocysteine S-methyltransferase Methionine synthase domain 11
PRC-barrel domain PRC-barrel domain 11
2Fe-2S ferredoxin-like Molybdenum cofactor-binding domain 11
Penicillin-binding protein 2x (pbp-2x), c-terminal domain Penicillin-binding protein 2x (pbp-2x), c-terminal domain 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
CheY-like Histidine-containing phosphotransfer domain, HPT domain 11
Nucleotidyltransferase Poly A polymerase C-terminal region-like 11
P-loop containing nucleoside triphosphate hydrolases Obg GTP-binding protein C-terminal domain 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Cobalamin (vitamin B12)-binding domain Radical SAM enzymes 11
CheW-like CheY-like 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
(Trans)glycosidases Carbohydrate-binding domain 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
2Fe-2S ferredoxin-like Fe-only hydrogenase 11
PK beta-barrel domain-like Phosphohistidine domain 11
Fibronectin type III Carbohydrate binding domain 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
Eukaryotic type KH-domain (KH-domain type I) HD-domain/PDEase-like 11
ACT-like Homeodomain-like 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 11
GIY-YIG endonuclease RuvA domain 2-like 11
FAD/NAD(P)-binding domain SirA-like 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
MgtE N-terminal domain-like MgtE membrane domain-like 11
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Clostridium neurotoxins, "coiled-coil" domain STI-like 11
TGS-like Class II aaRS and biotin synthetases 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Tetrapyrrole methylase HemD-like 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
Class II aaRS and biotin synthetases GAD domain-like 11
DNA repair protein MutS, domain III SMR domain-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
Ligand-binding domain in the NO signalling and Golgi transport Methyl-accepting chemotaxis protein (MCP) signaling domain 11
MesJ substrate recognition domain-like PheT/TilS domain 11
Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
FMN-linked oxidoreductases Nucleotide-binding domain 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
DNA primase core N-terminal domain of DnaB helicase 11
CheY-like CheC-like 11
Acyl-CoA dehydrogenase C-terminal domain-like DHS-like NAD/FAD-binding domain 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases PTS-regulatory domain, PRD 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
HD-domain/PDEase-like Nucleotidyltransferase 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Carboxypeptidase regulatory domain-like PHP domain-like 11
Acylphosphatase/BLUF domain-like Actin-like ATPase domain 11
Enolase N-terminal domain-like Enolase C-terminal domain-like 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
FAD/NAD(P)-binding domain DsrEFH-like 11
P-loop containing nucleoside triphosphate hydrolases Ribonuclease H-like 11
Metalloproteases ("zincins"), catalytic domain STI-like 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
CheY-binding domain of CheA Homodimeric domain of signal transducing histidine kinase 11
N-terminal domain of the delta subunit of the F1F0-ATP synthase V-type ATPase subunit E-like 11
Nucleic acid-binding proteins BRCT domain 11
CheY-like CheY-like 11
Rudiment single hybrid motif Single hybrid motif 11
TPR-like SGNH hydrolase 11
(Trans)glycosidases PGBD-like 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
TATA-box binding protein-like DNA-glycosylase 11
TSP type-3 repeat alpha/beta-Hydrolases 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Nucleotidylyl transferase tRNA-binding arm 11
MoeA N-terminal region -like Periplasmic binding protein-like II 11
CPE0013-like Formate dehydrogenase/DMSO reductase, domains 1-3 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
4Fe-4S ferredoxins Nucleotide-binding domain 11
GAF domain-like Nucleotide cyclase 11
PTS-regulatory domain, PRD Phoshotransferase/anion transport protein 11
TrkA C-terminal domain-like TrkA C-terminal domain-like 11
PreATP-grasp domain Aldolase 11
HD-domain/PDEase-like HD-domain/PDEase-like 11
PreATP-grasp domain Methylglyoxal synthase-like 11
4Fe-4S ferredoxins alpha-helical ferredoxin 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
"Winged helix" DNA-binding domain C-terminal domain of arginine repressor 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
Chaperone J-domain TPR-like 11
CBS-domain pair Nucleotide-diphospho-sugar transferases 11
Nucleotidyltransferase TGS-like 11
Nqo1 middle domain-like 4Fe-4S ferredoxins 11
YrdC/RibB Actin-like ATPase domain 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Class II aaRS and biotin synthetases C-terminal domain of ProRS 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
L domain-like Tricorn protease N-terminal domain 11

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