Domain combination pairs in Musa balbisiana

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Domain combination pairs

3007 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N)	Superfamily (C)	Number of occurrances	Number unique
Ribonuclease H-like	DNA/RNA polymerases	534	79
L domain-like	Protein kinase-like (PK-like)	299	73
P-loop containing nucleoside triphosphate hydrolases	P-loop containing nucleoside triphosphate hydrolases	188	77
Retrovirus zinc finger-like domains	Ribonuclease H-like	165	32
Acid proteases	DNA/RNA polymerases	156	37
RNA-binding domain, RBD	RNA-binding domain, RBD	118	36
L domain-like	L domain-like	110	61
RNI-like	L domain-like	107	53
RNI-like	Protein kinase-like (PK-like)	89	36
Actin-like ATPase domain	Actin-like ATPase domain	86	32
Retrovirus zinc finger-like domains	DNA/RNA polymerases	86	27
RING/U-box	ARM repeat	81	17
P-loop containing nucleoside triphosphate hydrolases	L domain-like	78	25
Ribonuclease H-like	Ribonuclease H-like	72	35
HAD-like	Calcium ATPase, transmembrane domain M	71	20
DNA/RNA polymerases	DNA/RNA polymerases	69	29
Calcium ATPase, transduction domain A	Calcium ATPase, transmembrane domain M	69	18
Calcium ATPase, transduction domain A	HAD-like	67	17
DNA/RNA polymerases	Chromo domain-like	66	21
TPR-like	TPR-like	64	29
ARM repeat	ARM repeat	61	32
F-box domain	RNI-like	60	20
Thiolase-like	Thiolase-like	58	7
Protein kinase-like (PK-like)	EF-hand	54	8
Acid proteases	Ribonuclease H-like	53	22
Cyclin-like	Cyclin-like	53	10
Cupredoxins	Cupredoxins	53	8
CRAL/TRIO N-terminal domain	CRAL/TRIO domain	53	18
Thioredoxin-like	GST C-terminal domain-like	53	12
Barwin-like endoglucanases	PHL pollen allergen	47	5
S-adenosyl-L-methionine-dependent methyltransferases	S-adenosyl-L-methionine-dependent methyltransferases	47	20
Protein kinase-like (PK-like)	alpha-D-mannose-specific plant lectins	47	13
RNI-like	RNI-like	44	25
ABC transporter transmembrane region	P-loop containing nucleoside triphosphate hydrolases	43	17
F-box domain	Kelch motif	43	9
FAD/NAD(P)-binding domain	FAD/NAD(P)-binding domain	43	12
Metal cation-transporting ATPase, ATP-binding domain N	HAD-like	43	13
Homeodomain-like	Homeodomain-like	43	17
Calcium ATPase, transmembrane domain M	Metal cation-transporting ATPase, ATP-binding domain N	42	12
Plant invertase/pectin methylesterase inhibitor	Pectin lyase-like	41	5
GroES-like	NAD(P)-binding Rossmann-fold domains	41	12
Protein kinase-like (PK-like)	Protein kinase-like (PK-like)	40	29
Calcium ATPase, transduction domain A	Metal cation-transporting ATPase, ATP-binding domain N	39	9
NAD(P)-binding Rossmann-fold domains	6-phosphogluconate dehydrogenase C-terminal domain-like	38	12
ENTH/VHS domain	GAT-like domain	37	8
NAD(P)-binding Rossmann-fold domains	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	37	17
Ferredoxin reductase-like, C-terminal NADP-linked domain	Riboflavin synthase domain-like	36	16
DNA-binding domain	DNA-binding domain	36	5
ABC transporter transmembrane region	ABC transporter transmembrane region	35	10
Tubulin nucleotide-binding domain-like	Tubulin C-terminal domain-like	35	11
Voltage-gated potassium channels	cAMP-binding domain-like	35	14
Concanavalin A-like lectins/glucanases	Protein kinase-like (PK-like)	35	12
P-loop containing nucleoside triphosphate hydrolases	Translation proteins	34	19
Ribonuclease H-like	Chromo domain-like	34	12
Galactose-binding domain-like	(Trans)glycosidases	32	14
ACT-like	ACT-like	32	12
(Trans)glycosidases	Glycosyl hydrolase domain	31	10
FAD/NAD(P)-binding domain	FAD-linked reductases, C-terminal domain	31	14
Actin-like ATPase domain	Heat shock protein 70kD (HSP70), peptide-binding domain	30	13
C2 domain (Calcium/lipid-binding domain, CaLB)	C2 domain (Calcium/lipid-binding domain, CaLB)	30	10
beta-beta-alpha zinc fingers	beta-beta-alpha zinc fingers	29	13
DNA-binding pseudobarrel domain	CAD & PB1 domains	29	5
HSP40/DnaJ peptide-binding domain	HSP40/DnaJ peptide-binding domain	28	18
CCCH zinc finger	CCCH zinc finger	28	19
WRKY DNA-binding domain	WRKY DNA-binding domain	28	8
Chaperone J-domain	HSP40/DnaJ peptide-binding domain	28	18
Thioredoxin-like	Thioredoxin-like	28	20
Homeodomain-like	Bet v1-like	28	10
"Winged helix" DNA-binding domain	S-adenosyl-L-methionine-dependent methyltransferases	27	6
Actin-like ATPase domain	Heat shock protein 70kD (HSP70), C-terminal subdomain	26	8
GroEL equatorial domain-like	GroEL apical domain-like	25	9
GroEL-intermediate domain like	GroEL apical domain-like	25	9
GroEL equatorial domain-like	GroEL-intermediate domain like	24	8
Beta-D-glucan exohydrolase, C-terminal domain	(Trans)glycosidases	24	11
Multidrug resistance efflux transporter EmrE	Multidrug resistance efflux transporter EmrE	24	8
Galactose-binding domain-like	Galactose-binding domain-like	24	8
Heat shock protein 70kD (HSP70), peptide-binding domain	Heat shock protein 70kD (HSP70), C-terminal subdomain	24	7
Eukaryotic type KH-domain (KH-domain type I)	Eukaryotic type KH-domain (KH-domain type I)	24	15
Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	23	10
Bet v1-like	Bet v1-like	23	9
Nucleic acid-binding proteins	Nucleic acid-binding proteins	22	17
Ypt/Rab-GAP domain of gyp1p	Ypt/Rab-GAP domain of gyp1p	22	11
NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	22	17
PK beta-barrel domain-like	Phosphoenolpyruvate/pyruvate domain	22	10
Retrovirus zinc finger-like domains	Retrovirus zinc finger-like domains	22	14
Phosphoenolpyruvate/pyruvate domain	PK C-terminal domain-like	21	7
Terpenoid cyclases/Protein prenyltransferases	Terpenoid synthases	21	8
FAD-binding/transporter-associated domain-like	FAD-linked oxidases, C-terminal domain	21	6
RING/U-box	RING/U-box	20	14
Protein kinase-like (PK-like)	ARM repeat	20	19
Subtilisin-like	PA domain	20	3
Double Clp-N motif	P-loop containing nucleoside triphosphate hydrolases	20	9
F-box domain	Galactose oxidase, central domain	19	5
Aminoacid dehydrogenase-like, N-terminal domain	NAD(P)-binding Rossmann-fold domains	19	11
Translation proteins	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain	19	7
Nucleotidyltransferase	PAP/OAS1 substrate-binding domain	19	11
P-loop containing nucleoside triphosphate hydrolases	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain	19	7
Periplasmic binding protein-like I	Periplasmic binding protein-like II	19	6
Glucocorticoid receptor-like (DNA-binding domain)	AN1-like Zinc finger	18	2
Glucocorticoid receptor-like (DNA-binding domain)	Glucocorticoid receptor-like (DNA-binding domain)	18	8
Ubiquitin-like	Ubiquitin-like	18	14
Ran binding protein zinc finger-like	Ran binding protein zinc finger-like	18	14
RING/U-box	Nucleotide-diphospho-sugar transferases	18	6
Periplasmic binding protein-like II	ACT-like	17	5
POZ domain	Ankyrin repeat	17	4
UDP-Glycosyltransferase/glycogen phosphorylase	HAD-like	17	10
Chaperone J-domain	DnaJ/Hsp40 cysteine-rich domain	17	14
CBS-domain pair	CBS-domain pair	17	12
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	Ribosomal protein S5 domain 2-like	17	10
DnaJ/Hsp40 cysteine-rich domain	HSP40/DnaJ peptide-binding domain	17	14
HMA, heavy metal-associated domain	HMA, heavy metal-associated domain	16	9
Purple acid phosphatase, N-terminal domain	Metallo-dependent phosphatases	16	7
PK beta-barrel domain-like	PK C-terminal domain-like	16	6
Acid proteases	Chromo domain-like	16	7
DNA-binding domain	DNA-binding pseudobarrel domain	16	4
Formate/glycerate dehydrogenase catalytic domain-like	NAD(P)-binding Rossmann-fold domains	16	5
MFS general substrate transporter	MFS general substrate transporter	16	5
P-loop containing nucleoside triphosphate hydrolases	FtsH protease domain-like	16	6
Phospholipase D/nuclease	Phospholipase D/nuclease	16	9
GroES-like	GroES-like	16	11
Lipase/lipooxygenase domain (PLAT/LH2 domain)	Lipoxigenase	16	4
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain	SAICAR synthase-like	15	7
P-loop containing nucleoside triphosphate hydrolases	RNI-like	15	11
RING/U-box	vWA-like	15	8
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain	Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain	15	9
RNA-binding domain, RBD	Retrovirus zinc finger-like domains	15	6
WD40 repeat-like	WD40 repeat-like	15	9
alpha-D-mannose-specific plant lectins	alpha-D-mannose-specific plant lectins	15	9
NAD(P)-binding Rossmann-fold domains	LDH C-terminal domain-like	15	3
LuxS/MPP-like metallohydrolase	LuxS/MPP-like metallohydrolase	15	12
EF-hand	EF-hand	15	7
Protein kinase-like (PK-like)	Adenine nucleotide alpha hydrolases-like	15	6
CheY-like	Homeodomain-like	14	4
Ubiquitin-like	UBA-like	14	10
Actin depolymerizing proteins	Actin depolymerizing proteins	14	12
RNA-binding domain, RBD	CCCH zinc finger	14	7
SNARE-like	SNARE fusion complex	14	7
POZ domain	Skp1 dimerisation domain-like	14	5
Protein kinase-like (PK-like)	TPR-like	14	6
Thiamin diphosphate-binding fold (THDP-binding)	TK C-terminal domain-like	14	6
vWA-like	beta-sandwich domain of Sec23/24	14	13
PAZ domain	Ribonuclease H-like	13	7
Cullin homology domain	"Winged helix" DNA-binding domain	13	4
Riboflavin synthase domain-like	EF-hand	13	3
Ferredoxin reductase-like, C-terminal NADP-linked domain	EF-hand	13	3
NTF2-like	RNA-binding domain, RBD	13	3
Cullin repeat-like	Cullin homology domain	13	4
C2 domain (Calcium/lipid-binding domain, CaLB)	Phospholipase D/nuclease	13	8
FYVE/PHD zinc finger	RING/U-box	13	12
EGF/Laminin	Protein kinase-like (PK-like)	13	3
HCP-like	TPR-like	13	9
P-loop containing nucleoside triphosphate hydrolases	post-AAA+ oligomerization domain-like	12	7
Homodimeric domain of signal transducing histidine kinase	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	12	9
Nucleic acid-binding proteins	P-loop containing nucleoside triphosphate hydrolases	12	7
Protein kinase-like (PK-like)	RING/U-box	12	8
Cullin repeat-like	"Winged helix" DNA-binding domain	12	3
beta-sandwich domain of Sec23/24	Helical domain of Sec23/24	12	11
Nucleotidylyl transferase	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	12	10
N-terminal domain of alpha and beta subunits of F1 ATP synthase	P-loop containing nucleoside triphosphate hydrolases	12	8
Zn-finger domain of Sec23/24	vWA-like	12	11
FAS1 domain	FAS1 domain	12	4
HMA, heavy metal-associated domain	Calcium ATPase, transduction domain A	12	9
Clc chloride channel	CBS-domain pair	12	5
P-loop containing nucleoside triphosphate hydrolases	Ankyrin repeat	12	7
HMA, heavy metal-associated domain	HAD-like	12	9
Ankyrin repeat	Protein kinase-like (PK-like)	11	6
Protein kinase-like (PK-like)	WD40 repeat-like	11	8
(Trans)glycosidases	(Trans)glycosidases	11	7
Ribosomal protein S5 domain 2-like	HSP90 C-terminal domain	11	5
Ubiquitin-like	Zn-binding ribosomal proteins	11	3
6-phosphogluconate dehydrogenase C-terminal domain-like	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain	11	5
Cation efflux protein transmembrane domain-like	Cation efflux protein cytoplasmic domain-like	11	6
PLP-dependent transferases	PLP-dependent transferases	11	7
dsRNA-binding domain-like	dsRNA-binding domain-like	11	7
Zn-finger domain of Sec23/24	beta-sandwich domain of Sec23/24	11	10
Zn-dependent exopeptidases	Bacterial exopeptidase dimerisation domain	11	5
Translation proteins SH3-like domain	Nucleic acid-binding proteins	11	9
ARM repeat	WD40 repeat-like	11	10
Homodimeric domain of signal transducing histidine kinase	CheY-like	11	7
Ribosomal protein S5 domain 2-like	GHMP Kinase, C-terminal domain	11	9
HMA, heavy metal-associated domain	Calcium ATPase, transmembrane domain M	11	8
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	HSP90 C-terminal domain	11	5
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	CheY-like	11	8
vWA-like	Helical domain of Sec23/24	11	10
NAD(P)-binding Rossmann-fold domains	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain	10	4
beta-sandwich domain of Sec23/24	C-terminal, gelsolin-like domain of Sec23/24	10	10
POZ domain	TRAF domain-like	10	3
FAD/NAD(P)-binding domain	FAD/NAD-linked reductases, dimerisation (C-terminal) domain	10	4
PreATP-grasp domain	Glutathione synthetase ATP-binding domain-like	10	10
Zn-finger domain of Sec23/24	Helical domain of Sec23/24	10	9
FYVE/PHD zinc finger	P-loop containing nucleoside triphosphate hydrolases	10	7
P-loop containing nucleoside triphosphate hydrolases	Ribosomal protein S5 domain 2-like	10	8
RING/U-box	P-loop containing nucleoside triphosphate hydrolases	10	7
S-adenosylmethionine synthetase	S-adenosylmethionine synthetase	10	2
Thioesterase/thiol ester dehydrase-isomerase	Thioesterase/thiol ester dehydrase-isomerase	10	3
cAMP-binding domain-like	Ankyrin repeat	10	4
P-loop containing nucleoside triphosphate hydrolases	C-terminal domain of alpha and beta subunits of F1 ATP synthase	10	6
CAD & PB1 domains	Protein kinase-like (PK-like)	10	4
Helical domain of Sec23/24	C-terminal, gelsolin-like domain of Sec23/24	10	10
Concanavalin A-like lectins/glucanases	P-domain of calnexin/calreticulin	10	3
Voltage-gated potassium channels	Ankyrin repeat	10	4
N-terminal domain of alpha and beta subunits of F1 ATP synthase	C-terminal domain of alpha and beta subunits of F1 ATP synthase	10	6
HCP-like	HCP-like	9	8
Ubiquitin-like	BAG domain	9	4
HCP-like	HIT/MYND zinc finger-like	9	5
P-loop containing nucleoside triphosphate hydrolases	EF-G C-terminal domain-like	9	7
Nucleotide-diphospho-sugar transferases	Trimeric LpxA-like enzymes	9	3
Nucleotide-diphospho-sugar transferases	Nucleotide-diphospho-sugar transferases	9	7
P-loop containing nucleoside triphosphate hydrolases	Class I glutamine amidotransferase-like	9	4
Translation proteins	EF-G C-terminal domain-like	9	7
E set domains	P-loop containing nucleoside triphosphate hydrolases	9	4
FYVE/PHD zinc finger	FYVE/PHD zinc finger	9	6
Calponin-homology domain, CH-domain	P-loop containing nucleoside triphosphate hydrolases	9	4
RING/U-box	WD40 repeat-like	9	9
SNARE-like	Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor	9	6
Thiamin diphosphate-binding fold (THDP-binding)	DHS-like NAD/FAD-binding domain	9	2
HLH, helix-loop-helix DNA-binding domain	ACT-like	9	4
RCC1/BLIP-II	FYVE/PHD zinc finger	9	3
ARM repeat	Clathrin adaptor appendage domain	9	8
RCC1/BLIP-II	Protein kinase-like (PK-like)	9	3
Cytochrome P450	Cytochrome P450	9	3
vWA-like	C-terminal, gelsolin-like domain of Sec23/24	9	9
Cdc48 domain 2-like	P-loop containing nucleoside triphosphate hydrolases	9	7
Sigma2 domain of RNA polymerase sigma factors	Sigma3 and sigma4 domains of RNA polymerase sigma factors	9	5
WD40 repeat-like	Quinoprotein alcohol dehydrogenase-like	9	7
Single hybrid motif	CoA-dependent acyltransferases	8	6
ARM repeat	Sec7 domain	8	4
Homeodomain-like	P-loop containing nucleoside triphosphate hydrolases	8	7
Transducin (alpha subunit), insertion domain	P-loop containing nucleoside triphosphate hydrolases	8	4
Ankyrin repeat	RING/U-box	8	3
Amine oxidase N-terminal region	Amine oxidase N-terminal region	8	6
PH domain-like	Oxysterol-binding protein-like	8	3
Enolase N-terminal domain-like	Enolase C-terminal domain-like	8	6
PH domain-like	RCC1/BLIP-II	8	2
PYP-like sensor domain (PAS domain)	PYP-like sensor domain (PAS domain)	8	7
PH domain-like	FYVE/PHD zinc finger	8	2
RNA-binding domain, RBD	PABC (PABP) domain	8	5
Ribosomal protein S5 domain 2-like	Ribonuclease PH domain 2-like	8	6
E set domains	Ankyrin repeat	8	4
(Phosphotyrosine protein) phosphatases II	C2 domain (Calcium/lipid-binding domain, CaLB)	8	4
Nucleic acid-binding proteins	Retrovirus zinc finger-like domains	8	6
Amine oxidase N-terminal region	Amine oxidase catalytic domain	8	6
Zn-finger domain of Sec23/24	C-terminal, gelsolin-like domain of Sec23/24	8	8
EF-G C-terminal domain-like	EF-G C-terminal domain-like	8	6
FKBP-like	FKBP-like	8	5
Glutamine synthetase, N-terminal domain	Glutamine synthetase/guanido kinase	8	2
Cysteine proteinases	Granulin repeat	8	2
Class II aaRS and biotin synthetases	Class II aaRS ABD-related	8	8
Trypsin-like serine proteases	PDZ domain-like	8	5
Acid proteases	Saposin	8	5
Actin depolymerizing proteins	VHP, Villin headpiece domain	8	7
Sigma3 and sigma4 domains of RNA polymerase sigma factors	Sigma3 and sigma4 domains of RNA polymerase sigma factors	8	4
Fe,Mn superoxide dismutase (SOD), N-terminal domain	Fe,Mn superoxide dismutase (SOD), C-terminal domain	7	5
ArfGap/RecO-like zinc finger	C2 domain (Calcium/lipid-binding domain, CaLB)	7	4
"Winged helix" DNA-binding domain	RNA-binding domain, RBD	7	4
Acyl-CoA dehydrogenase NM domain-like	Acyl-CoA dehydrogenase C-terminal domain-like	7	6
EF-hand	P-loop containing nucleoside triphosphate hydrolases	7	3
UBA-like	UBA-like	7	5
P-loop containing nucleoside triphosphate hydrolases	Retrovirus zinc finger-like domains	7	6
Nucleotidylyl transferase	Nucleotidylyl transferase	7	5
beta-beta-alpha zinc fingers	Ribonuclease H-like	7	5
Cryptochrome/photolyase, N-terminal domain	Cryptochrome/photolyase FAD-binding domain	7	6
Galactose mutarotase-like	(Trans)glycosidases	7	4
GroEL apical domain-like	SAICAR synthase-like	7	5
Protein kinase-like (PK-like)	Ubiquitin-like	7	6
RCC1/BLIP-II	RCC1/BLIP-II	7	2
Ribonuclease H-like	Protein kinase-like (PK-like)	7	7
Protein kinase-like (PK-like)	P-loop containing nucleoside triphosphate hydrolases	7	7
Galactose oxidase, central domain	E set domains	7	2
Voltage-gated potassium channels	Voltage-gated potassium channels	7	5
DNA/RNA polymerases	Protein kinase-like (PK-like)	7	7
ISP domain	Bet v1-like	7	3
C2 domain (Calcium/lipid-binding domain, CaLB)	Formin homology 2 domain (FH2 domain)	7	4
ARM repeat	P-loop containing nucleoside triphosphate hydrolases	7	6
RING/U-box	Cysteine proteinases	7	5
PreATP-grasp domain	Rudiment single hybrid motif	7	7
P-loop containing nucleoside triphosphate hydrolases	RNA-binding domain, RBD	7	6
DNA repair protein MutS, domain III	P-loop containing nucleoside triphosphate hydrolases	7	7
PIN domain-like	5' to 3' exonuclease, C-terminal subdomain	7	5
CRAL/TRIO N-terminal domain	Supernatant protein factor (SPF), C-terminal domain	7	3
P-loop containing nucleoside triphosphate hydrolases	Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain	7	3
FKBP-like	TPR-like	7	4
RmlC-like cupins	RmlC-like cupins	7	4
Clathrin adaptor appendage domain	Subdomain of clathrin and coatomer appendage domain	7	6
ARM repeat	Subdomain of clathrin and coatomer appendage domain	7	6
PUA domain-like	SET domain	7	2
Glutathione synthetase ATP-binding domain-like	Rudiment single hybrid motif	7	7
PLC-like phosphodiesterases	PLC-like phosphodiesterases	7	4
CRAL/TRIO domain	Supernatant protein factor (SPF), C-terminal domain	7	3
YhbY-like	YhbY-like	7	4
TPR-like	Thioredoxin-like	7	4
Ribosomal L11/L12e N-terminal domain	Ribosomal protein L11, C-terminal domain	7	1
GAF domain-like	Homodimeric domain of signal transducing histidine kinase	7	6
NAD(P)-binding Rossmann-fold domains	ACT-like	7	4
Translation proteins	Ribosomal protein S5 domain 2-like	6	4
Translational machinery components	L30e-like	6	2
F-box domain	HCP-like	6	3
DNA/RNA polymerases	F-box domain	6	6
PH domain-like	Bet v1-like	6	3
PLC-like phosphodiesterases	C2 domain (Calcium/lipid-binding domain, CaLB)	6	3
E set domains	(Trans)glycosidases	6	6
SWIB/MDM2 domain	Plus3-like	6	5
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	6	3
"Winged helix" DNA-binding domain	E2F-DP heterodimerization region	6	6
GAF domain-like	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	6	6
NagB/RpiA/CoA transferase-like	D-ribose-5-phosphate isomerase (RpiA), lid domain	6	2
PYP-like sensor domain (PAS domain)	Protein kinase-like (PK-like)	6	4
CBS-domain pair	CAD & PB1 domains	6	4
F-box domain	Tubby C-terminal domain-like	6	3
MurD-like peptide ligases, catalytic domain	MurD-like peptide ligases, peptide-binding domain	6	5
dsRNA-binding domain-like	Ribosomal protein S5 domain 2-like	6	1
ENT-like	Tudor/PWWP/MBT	6	4
Chromo domain-like	Chromo domain-like	6	5
Plant lectins/antimicrobial peptides	Lysozyme-like	6	1
FYVE/PHD zinc finger	Acyl-CoA N-acyltransferases (Nat)	6	4
Retrovirus zinc finger-like domains	Acid proteases	6	5
Flavoproteins	Riboflavin synthase domain-like	6	4
HAD-like	HAD-like	6	5
RING/U-box	Homeodomain-like	6	6
Acyl-CoA N-acyltransferases (Nat)	Acyl-CoA N-acyltransferases (Nat)	6	3
alpha/beta-Hydrolases	alpha/beta-Hydrolases	6	5
Kelch motif	Kelch motif	6	4
Nucleic acid-binding proteins	Class II aaRS and biotin synthetases	6	5
Arabinanase/levansucrase/invertase	Concanavalin A-like lectins/glucanases	6	2
Phosphoglucomutase, first 3 domains	Phosphoglucomutase, first 3 domains	6	6
Chaperone J-domain	Chaperone J-domain	6	5
RNase III domain-like	dsRNA-binding domain-like	6	5
Homeodomain-like	"Winged helix" DNA-binding domain	6	3
Ankyrin repeat	Ankyrin repeat	6	4
Flavoproteins	Ferredoxin reductase-like, C-terminal NADP-linked domain	6	4
UDP-Glycosyltransferase/glycogen phosphorylase	UDP-Glycosyltransferase/glycogen phosphorylase	6	4
ARM repeat	Hect, E3 ligase catalytic domain	6	4
ValRS/IleRS/LeuRS editing domain	Nucleotidylyl transferase	6	6
TATA-box binding protein-like	TATA-box binding protein-like	6	4
DNA/RNA polymerases	ARM repeat	6	6
EF-G C-terminal domain-like	Ribosomal protein S5 domain 2-like	6	4
ClpP/crotonase	ClpP/crotonase	6	6
BAR/IMD domain-like	SH3-domain	6	4
PP2C-like	PP2C-like	6	3
BEACH domain	WD40 repeat-like	6	4
HD-domain/PDEase-like	Nucleotidyltransferase	6	5
PRTase-like	PRTase-like	5	3
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1	L30e-like	5	1
(Phosphotyrosine protein) phosphatases II	Actin depolymerizing proteins	5	3
P-loop containing nucleoside triphosphate hydrolases	"Winged helix" DNA-binding domain	5	4
E set domains	Glycosyl hydrolase domain	5	5
PAP/OAS1 substrate-binding domain	PAP/Archaeal CCA-adding enzyme, C-terminal domain	5	3
Activating enzymes of the ubiquitin-like proteins	Activating enzymes of the ubiquitin-like proteins	5	4
6-phosphogluconate dehydrogenase C-terminal domain-like	6-phosphogluconate dehydrogenase C-terminal domain-like	5	4
Homeodomain-like	FAD/NAD(P)-binding domain	5	3
F-box domain	WD40 repeat-like	5	4
DNA-binding pseudobarrel domain	DNA-binding pseudobarrel domain	5	3
UROD/MetE-like	UROD/MetE-like	5	1
TPR-like	CAD & PB1 domains	5	3
Leukotriene A4 hydrolase N-terminal domain	Metalloproteases ("zincins"), catalytic domain	5	5
PH domain-like	ArfGap/RecO-like zinc finger	5	4
ADC-like	P-loop containing nucleoside triphosphate hydrolases	5	3
Prokaryotic type KH domain (KH-domain type II)	Ribosomal protein S3 C-terminal domain	5	3
P-loop containing nucleoside triphosphate hydrolases	Initiation factor IF2/eIF5b, domain 3	5	4
POZ domain	TAZ domain	5	4
Zinc beta-ribbon	Cyclin-like	5	4
t-snare proteins	SNARE fusion complex	5	3
Galactose mutarotase-like	Galactose-binding domain-like	5	5
Acetyl-CoA synthetase-like	Acetyl-CoA synthetase-like	5	3
EF-hand	PLC-like phosphodiesterases	5	2
Clathrin heavy-chain terminal domain	ARM repeat	5	4
Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	5	5
BAR/IMD domain-like	ArfGap/RecO-like zinc finger	5	4
Domain of the SRP/SRP receptor G-proteins	P-loop containing nucleoside triphosphate hydrolases	5	5
EF-hand	C2 domain (Calcium/lipid-binding domain, CaLB)	5	2
Translation proteins	Initiation factor IF2/eIF5b, domain 3	5	4
YrdC/RibB	RibA-like	5	1
P-loop containing nucleoside triphosphate hydrolases	DNA/RNA polymerases	5	5
BAR/IMD domain-like	PH domain-like	5	4
NAC domain	NAC domain	5	3
NAD(P)-binding Rossmann-fold domains	Protein kinase-like (PK-like)	5	5
ARM repeat	C2 domain (Calcium/lipid-binding domain, CaLB)	5	5
Transcription factor IIA (TFIIA), alpha-helical domain	Transcription factor IIA (TFIIA), beta-barrel domain	5	3
Phosphoglucomutase, first 3 domains	Phosphoglucomutase, C-terminal domain	5	5
ValRS/IleRS/LeuRS editing domain	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	5	5
F-box domain	HIT/MYND zinc finger-like	5	2
Serine metabolism enzymes domain	ACT-like	5	2
ADC-like	Cdc48 domain 2-like	5	3
Concanavalin A-like lectins/glucanases	Concanavalin A-like lectins/glucanases	5	4
NAD(P)-binding Rossmann-fold domains	Serine metabolism enzymes domain	5	2
PAH2 domain	PAH2 domain	5	3
Single hybrid motif	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex	5	4
Homeodomain-like	FAD-linked reductases, C-terminal domain	5	3
RNase III domain-like	RNase III domain-like	5	5
PLP-binding barrel	Alanine racemase C-terminal domain-like	5	3
alpha-D-mannose-specific plant lectins	Hairpin loop containing domain-like	5	4
RING/U-box	TRAF domain-like	5	4
P-loop containing nucleoside triphosphate hydrolases	PH domain-like	5	3
UBA-like	XPC-binding domain	5	3
P-loop containing nucleoside triphosphate hydrolases	dsRNA-binding domain-like	5	4
Nucleotidyltransferase	PAP/Archaeal CCA-adding enzyme, C-terminal domain	5	3
TPR-like	Chaperone J-domain	5	3
ARM repeat	TPR-like	5	4
(Phosphotyrosine protein) phosphatases II	Formin homology 2 domain (FH2 domain)	5	2
F1F0 ATP synthase subunit C	F1F0 ATP synthase subunit C	5	4
Phosphoenolpyruvate/pyruvate domain	Phosphoenolpyruvate/pyruvate domain	5	3
Peptidase/esterase 'gauge' domain	alpha/beta-Hydrolases	5	2
Saposin	Saposin	5	2
EF-hand	Mitochondrial carrier	5	2
L domain-like	ARM repeat	5	4
DNase I-like	DNase I-like	5	3
Galactose mutarotase-like	Glycosyl hydrolase domain	5	2
Coiled-coil domain of nucleotide exchange factor GrpE	Head domain of nucleotide exchange factor GrpE	5	3
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1	Translational machinery components	5	1
Thioredoxin-like	Ubiquitin-like	5	4
C-terminal, gelsolin-like domain of Sec23/24	Actin depolymerizing proteins	4	3
UBA-like	Thioredoxin-like	4	3
Translation initiation factor 2 beta, aIF2beta, N-terminal domain	Zinc-binding domain of translation initiation factor 2 beta	4	3
Aldolase	NAD(P)-binding Rossmann-fold domains	4	4
POZ domain	TPR-like	4	3
FYVE/PHD zinc finger	SET domain	4	3
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	Adenine nucleotide alpha hydrolases-like	4	2
PYP-like sensor domain (PAS domain)	GAF domain-like	4	4
Metallo-dependent phosphatases	Metallo-dependent phosphatases	4	2
ARID-like	HMG-box	4	4
Fe-S cluster assembly (FSCA) domain-like	Fe-S cluster assembly (FSCA) domain-like	4	4
Terpenoid synthases	Terpenoid synthases	4	2
PH domain-like	GTPase activation domain, GAP	4	3
Translation proteins	Translation proteins	4	4
DNA ligase/mRNA capping enzyme, catalytic domain	Nucleic acid-binding proteins	4	4
F-box domain	Quinoprotein alcohol dehydrogenase-like	4	2
FMN-linked oxidoreductases	Alpha subunit of glutamate synthase, C-terminal domain	4	3
Actin-crosslinking proteins	(Trans)glycosidases	4	2
E set domains	AMPKBI-like	4	4
P-loop containing nucleoside triphosphate hydrolases	Hypothetical protein YjiA, C-terminal domain	4	4
GAF domain-like	GAF domain-like	4	4
Ubiquitin-like	Homeodomain-like	4	2
Oxidoreductase molybdopterin-binding domain	E set domains	4	2
NAD-binding domain of HMG-CoA reductase	Substrate-binding domain of HMG-CoA reductase	4	3
Elongation factor TFIIS domain 2	Zinc beta-ribbon	4	3
GAF domain-like	CheY-like	4	3
LysM domain	LysM domain	4	2
PH domain-like	Ankyrin repeat	4	3
Acyl-CoA dehydrogenase C-terminal domain-like	Acyl-CoA dehydrogenase C-terminal domain-like	4	3
HAD-like	Glycerol-3-phosphate (1)-acyltransferase	4	2
Heat shock protein 70kD (HSP70), C-terminal subdomain	Heat shock protein 70kD (HSP70), C-terminal subdomain	4	2
P-loop containing nucleoside triphosphate hydrolases	PRTase-like	4	3
Arabinanase/levansucrase/invertase	Nucleotide-diphospho-sugar transferases	4	2
Glycoside hydrolase/deacetylase	Families 57/38 glycoside transferase middle domain	4	4
PYP-like sensor domain (PAS domain)	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	4	4
ArfGap/RecO-like zinc finger	Ankyrin repeat	4	3
Cytidine deaminase-like	Cytidine deaminase-like	4	2
DNase I-like	EF-hand	4	3
Ribosomal protein L7/12, oligomerisation (N-terminal) domain	ClpS-like	4	2
Cytochrome b5-like heme/steroid binding domain	Ferredoxin reductase-like, C-terminal NADP-linked domain	4	2
Class I glutamine amidotransferase-like	Class I glutamine amidotransferase-like	4	4
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex	CoA-dependent acyltransferases	4	3
alpha/beta-Hydrolases	RING/U-box	4	4
Kelch motif	Metallo-dependent phosphatases	4	3
Carbamate kinase-like	ACT-like	4	4
PGBD-like	Metalloproteases ("zincins"), catalytic domain	4	1
HMA, heavy metal-associated domain	P-loop containing nucleoside triphosphate hydrolases	4	4
UBC-like	UBC-like	4	3
SBT domain	Ankyrin repeat	4	2
ARID-like	FYVE/PHD zinc finger	4	4
PUA domain-like	Nucleotidylyl transferase	4	2
Thioredoxin-like	Cysteine-rich domain	4	4
Protein kinase-like (PK-like)	F-box domain	4	4
GST C-terminal domain-like	GST C-terminal domain-like	4	2
P-loop containing nucleoside triphosphate hydrolases	RNase III domain-like	4	4
Class II aaRS and biotin synthetases	ThrRS/AlaRS common domain	4	4
LysM domain	Protein kinase-like (PK-like)	4	3
Protein kinase-like (PK-like)	(Phosphotyrosine protein) phosphatases II	4	3
"Winged helix" DNA-binding domain	"Winged helix" DNA-binding domain	4	3
P-loop containing nucleoside triphosphate hydrolases	Bromodomain	4	2
Mitochondrial carrier	Mitochondrial carrier	4	1
TRAF domain-like	Cysteine proteinases	4	2
NAC domain	Ribonuclease H-like	4	4
P-loop containing nucleoside triphosphate hydrolases	NAD(P)-binding Rossmann-fold domains	4	3
Rap30/74 interaction domains	"Winged helix" DNA-binding domain	4	3
FYVE/PHD zinc finger	Transducin (alpha subunit), insertion domain	4	2
Homeodomain-like	Bromodomain	4	2
DNA/RNA polymerases	Homeodomain-like	4	4
Ribonuclease H-like	HLH, helix-loop-helix DNA-binding domain	4	4
Glutathione synthetase ATP-binding domain-like	Succinyl-CoA synthetase domains	4	2
DPP6 N-terminal domain-like	alpha/beta-Hydrolases	4	3
Mannose-binding lectins	Mannose-binding lectins	4	3
Ribonuclease H-like	Nucleic acid-binding proteins	4	4
Aldolase	Aldolase	4	2
TRAF domain-like	TRAF domain-like	4	4
Toll/Interleukin receptor TIR domain	P-loop containing nucleoside triphosphate hydrolases	4	1
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	N-terminal nucleophile aminohydrolases (Ntn hydrolases)	4	3
Cytochrome b5-like heme/steroid binding domain	Riboflavin synthase domain-like	4	2
Families 57/38 glycoside transferase middle domain	Galactose mutarotase-like	4	4
(Trans)glycosidases	Chitinase insertion domain	4	2
C-terminal, gelsolin-like domain of Sec23/24	VHP, Villin headpiece domain	4	3
SET domain	RuBisCo LSMT C-terminal, substrate-binding domain	4	3
ARM repeat	Tudor/PWWP/MBT	4	4
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	FMN-linked oxidoreductases	4	3
Protein kinase-like (PK-like)	PP2C-like	4	3
Growth factor receptor domain	Protein kinase-like (PK-like)	4	3
ClpP/crotonase	NAD(P)-binding Rossmann-fold domains	4	3
Ubiquitin-like	XPC-binding domain	4	2
ARM repeat	Concanavalin A-like lectins/glucanases	4	4
UBC-like	Endosomal sorting complex assembly domain	4	3
Formate/glycerate dehydrogenase catalytic domain-like	ACT-like	4	1
BRCT domain	BRCT domain	4	4
P-loop containing nucleoside triphosphate hydrolases	NTF2-like	4	3
ClpP/crotonase	6-phosphogluconate dehydrogenase C-terminal domain-like	4	3
Ran binding protein zinc finger-like	RNA-binding domain, RBD	4	3
BAR/IMD domain-like	Ankyrin repeat	4	3
WD40 repeat-like	DPP6 N-terminal domain-like	4	3
HAD-like	BRCT domain	4	3
CoA-dependent acyltransferases	CoA-dependent acyltransferases	4	3
Tetrahydrobiopterin biosynthesis enzymes-like	Tetrahydrobiopterin biosynthesis enzymes-like	4	4
Formate/glycerate dehydrogenase catalytic domain-like	Serine metabolism enzymes domain	4	1
RING/U-box	RNA-binding domain, RBD	4	3
Glycoside hydrolase/deacetylase	Galactose mutarotase-like	4	4
P-loop containing nucleoside triphosphate hydrolases	TGS-like	4	4
Heme-dependent peroxidases	Heme-dependent peroxidases	4	3
S-adenosyl-L-methionine-dependent methyltransferases	P-loop containing nucleoside triphosphate hydrolases	4	4
Aconitase iron-sulfur domain	LeuD/IlvD-like	4	4
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	Alpha subunit of glutamate synthase, C-terminal domain	4	3
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	FAD/NAD(P)-binding domain	3	2
Starch-binding domain-like	Galactose-binding domain-like	3	3
CheY-like	CheY-like	3	2
Thioredoxin-like	"Winged helix" DNA-binding domain	3	1
Oxidoreductase molybdopterin-binding domain	Cytochrome b5-like heme/steroid binding domain	3	1
CO dehydrogenase flavoprotein C-terminal domain-like	CO dehydrogenase molybdoprotein N-domain-like	3	3
DNA/RNA polymerases	Lesion bypass DNA polymerase (Y-family), little finger domain	3	3
LEA14-like	LEA14-like	3	3
DNA repair protein MutS, domain II	DNA repair protein MutS, domain III	3	3
Oxidoreductase molybdopterin-binding domain	Ferredoxin reductase-like, C-terminal NADP-linked domain	3	1
HAD-like	dsRNA-binding domain-like	3	2
HAD-like	Riboflavin kinase-like	3	3
Domain of poly(ADP-ribose) polymerase	ADP-ribosylation	3	3
Amine oxidase catalytic domain	Amine oxidase catalytic domain	3	3
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain	3	2
Pectin lyase-like	Pectin lyase-like	3	3
Sec63 N-terminal domain-like	E set domains	3	2
Translation initiation factor 2 beta, aIF2beta, N-terminal domain	ARM repeat	3	2
CO dehydrogenase molybdoprotein N-domain-like	Molybdenum cofactor-binding domain	3	3
DNA primase core	P-loop containing nucleoside triphosphate hydrolases	3	3
CO dehydrogenase flavoprotein C-terminal domain-like	Molybdenum cofactor-binding domain	3	3
MIT domain	P-loop containing nucleoside triphosphate hydrolases	3	2
Acid proteases	ARM repeat	3	3
P-loop containing nucleoside triphosphate hydrolases	Signal peptide-binding domain	3	3
Tubby C-terminal domain-like	Tubby C-terminal domain-like	3	2
PYP-like sensor domain (PAS domain)	Homodimeric domain of signal transducing histidine kinase	3	3
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain	Alkaline phosphatase-like	3	1
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	Type II DNA topoisomerase	3	2
FAD-binding/transporter-associated domain-like	CO dehydrogenase molybdoprotein N-domain-like	3	3
RNI-like	ARM repeat	3	3
Cysteine proteinases	DUSP-like	3	3
CO dehydrogenase ISP C-domain like	FAD-binding/transporter-associated domain-like	3	3
DNA repair protein MutS, domain I	P-loop containing nucleoside triphosphate hydrolases	3	3
TAZ domain	RING/U-box	3	3
Rad51 N-terminal domain-like	P-loop containing nucleoside triphosphate hydrolases	3	3
NAD(P)-binding Rossmann-fold domains	Citrate synthase	3	3
Chaperone J-domain	4Fe-4S ferredoxins	3	3
Adenine nucleotide alpha hydrolases-like	RING/U-box	3	2
Glutathione synthetase ATP-binding domain-like	Phosphoenolpyruvate/pyruvate domain	3	3
DNA/RNA polymerases	HLH, helix-loop-helix DNA-binding domain	3	3
DNase I-like	DNA/RNA polymerases	3	2
Protein kinase-like (PK-like)	KA1-like	3	3
DNase I-like	P-loop containing nucleoside triphosphate hydrolases	3	3
Clavaminate synthase-like	Clavaminate synthase-like	3	3
Starch-binding domain-like	P-loop containing nucleoside triphosphate hydrolases	3	2
WGR domain-like	ADP-ribosylation	3	3
NAD(P)-binding Rossmann-fold domains	DNA/RNA polymerases	3	3
Alpha subunit of glutamate synthase, C-terminal domain	alpha-helical ferredoxin	3	2
L domain-like	Thioredoxin-like	3	3
Heme oxygenase-like	HAD-like	3	2
N-terminal domain of adenylylcyclase associated protein, CAP	C-terminal domain of adenylylcyclase associated protein	3	3
Formate/glycerate dehydrogenase catalytic domain-like	Formate/glycerate dehydrogenase catalytic domain-like	3	2
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70	Zinc beta-ribbon	3	2
CCCH zinc finger	Eukaryotic type KH-domain (KH-domain type I)	3	3
Cystatin/monellin	Cystatin/monellin	3	2
Obg GTP-binding protein N-terminal domain	P-loop containing nucleoside triphosphate hydrolases	3	3
TPR-like	S-adenosyl-L-methionine-dependent methyltransferases	3	3
Nucleic acid-binding proteins	Eukaryotic type KH-domain (KH-domain type I)	3	2
FAD-binding/transporter-associated domain-like	FAD-binding/transporter-associated domain-like	3	3
PUA domain-like	P-loop containing nucleoside triphosphate hydrolases	3	3
Nitrite and sulphite reductase 4Fe-4S domain-like	Nitrite and sulphite reductase 4Fe-4S domain-like	3	1
P-loop containing nucleoside triphosphate hydrolases	PAZ domain	3	3
SNARE fusion complex	SNARE fusion complex	3	2
TPR-like	"Winged helix" DNA-binding domain	3	2
beta and beta-prime subunits of DNA dependent RNA-polymerase	beta and beta-prime subunits of DNA dependent RNA-polymerase	3	2
FYVE/PHD zinc finger	Homeodomain-like	3	2
Six-hairpin glycosidases	AbfB domain	3	1
NAD(P)-binding Rossmann-fold domains	Glutamyl tRNA-reductase dimerization domain	3	1
WW domain	FF domain	3	3
SAP domain	FYVE/PHD zinc finger	3	3
Thioredoxin-like	P-loop containing nucleoside triphosphate hydrolases	3	3
SNARE-like	P-loop containing nucleoside triphosphate hydrolases	3	3
E set domains	Ferredoxin reductase-like, C-terminal NADP-linked domain	3	1
Hairpin loop containing domain-like	Protein kinase-like (PK-like)	3	2
P-loop containing nucleoside triphosphate hydrolases	Ribonuclease H-like	3	3
DNA repair protein MutS, domain II	P-loop containing nucleoside triphosphate hydrolases	3	3
Leucine zipper domain	P-loop containing nucleoside triphosphate hydrolases	3	2
WW domain	WW domain	3	3
FAD/NAD(P)-binding domain	EF-hand	3	2
E set domains	Cytochrome b5-like heme/steroid binding domain	3	1
beta-N-acetylhexosaminidase-like domain	(Trans)glycosidases	3	3
TAZ domain	FYVE/PHD zinc finger	3	3
E set domains	CBS-domain pair	3	3
ARM repeat	"Winged helix" DNA-binding domain	3	2
DNA repair protein MutS, domain I	DNA repair protein MutS, domain III	3	3
Cysteine proteinases	UBA-like	3	3
P-loop containing nucleoside triphosphate hydrolases	RecA protein, C-terminal domain	3	2
CO dehydrogenase ISP C-domain like	CO dehydrogenase molybdoprotein N-domain-like	3	3
Protein kinase-like (PK-like)	Leucine zipper domain	3	2
HAD-like	"Winged helix" DNA-binding domain	3	3
YVTN repeat-like/Quinoprotein amine dehydrogenase	WD40 repeat-like	3	3
CorA soluble domain-like	Magnesium transport protein CorA, transmembrane region	3	2
Ribosomal L27 protein-like	Nucleic acid-binding proteins	3	2
vWA-like	vWA-like	3	3
RING/U-box	PUA domain-like	3	3
PDZ domain-like	ClpP/crotonase	3	1
MurD-like peptide ligases, catalytic domain	MurD-like peptide ligases, catalytic domain	3	3
Pseudouridine synthase	PUA domain-like	3	1
Terpenoid cyclases/Protein prenyltransferases	Terpenoid cyclases/Protein prenyltransferases	3	3
RNA-binding domain, RBD	Thioredoxin-like	3	3
Ribosomal protein L29 (L29p)	alpha/beta-Hydrolases	3	2
Protein kinase-like (PK-like)	MFS general substrate transporter	3	3
2Fe-2S ferredoxin-like	alpha-helical ferredoxin	3	2
POZ domain	POZ domain	3	3
Tudor/PWWP/MBT	SET domain	3	3
Cytochrome c	Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor	3	1
Cysteine-rich domain	Cysteine-rich domain	3	2
Clavaminate synthase-like	beta-beta-alpha zinc fingers	3	3
DNA repair protein MutS, domain I	DNA repair protein MutS, domain II	3	3
RING/U-box	Ran binding protein zinc finger-like	3	2
Nucleotidyltransferase	Poly A polymerase C-terminal region-like	3	3
Phosphohistidine domain	Phosphoenolpyruvate/pyruvate domain	3	3
HLH, helix-loop-helix DNA-binding domain	HLH, helix-loop-helix DNA-binding domain	3	3
alpha-helical ferredoxin	FAD/NAD(P)-binding domain	3	2
Alpha subunit of glutamate synthase, C-terminal domain	FAD/NAD(P)-binding domain	3	2
Elongation factor Ts (EF-Ts), dimerisation domain	Elongation factor Ts (EF-Ts), dimerisation domain	3	3
PriA/YqbF domain	GINS helical bundle-like	3	3
PAZ domain	RNase III domain-like	3	3
PEP carboxykinase N-terminal domain	PEP carboxykinase-like	3	1
Nitrite/Sulfite reductase N-terminal domain-like	Nitrite/Sulfite reductase N-terminal domain-like	3	1
Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment	DNA breaking-rejoining enzymes	3	2
Homeodomain-like	Ribonuclease H-like	3	3
TPR-like	Ribonuclease H-like	3	3
WGR domain-like	Domain of poly(ADP-ribose) polymerase	3	3
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	alpha-helical ferredoxin	3	2
Protein kinase-like (PK-like)	HSP20-like chaperones	3	3
Zn-dependent exopeptidases	Transferrin receptor-like dimerisation domain	3	2
CO dehydrogenase ISP C-domain like	CO dehydrogenase flavoprotein C-terminal domain-like	3	3
Metallo-dependent hydrolases	Composite domain of metallo-dependent hydrolases	3	3
Zinc-binding domain of translation initiation factor 2 beta	ARM repeat	3	2
PYP-like sensor domain (PAS domain)	F-box domain	3	3
ARM repeat	UBA-like	3	3
Nicotinate/Quinolinate PRTase N-terminal domain-like	Nicotinate/Quinolinate PRTase C-terminal domain-like	3	3
Insert subdomain of RNA polymerase alpha subunit	RBP11-like subunits of RNA polymerase	3	1
L domain-like	WD40 repeat-like	3	3
Creatinase/aminopeptidase	"Winged helix" DNA-binding domain	3	3
Protease propeptides/inhibitors	Subtilisin-like	3	1
P-loop containing nucleoside triphosphate hydrolases	Ran binding protein zinc finger-like	3	3
(Trans)glycosidases	Ricin B-like lectins	3	3
UBA-like	Hect, E3 ligase catalytic domain	3	3
FMN-linked oxidoreductases	FAD/NAD(P)-binding domain	3	2
Glutathione synthetase ATP-binding domain-like	Phosphohistidine domain	3	3
Galactose-binding domain-like	NAD(P)-binding Rossmann-fold domains	3	3
SMAD/FHA domain	P-loop containing nucleoside triphosphate hydrolases	3	3
Concanavalin A-like lectins/glucanases	PH domain-like	3	3
Outer arm dynein light chain 1	L domain-like	3	3
Tryptophan synthase beta subunit-like PLP-dependent enzymes	Tryptophan synthase beta subunit-like PLP-dependent enzymes	3	3
Chromo domain-like	P-loop containing nucleoside triphosphate hydrolases	3	2
SWIB/MDM2 domain	SWIB/MDM2 domain	3	3
GST C-terminal domain-like	eEF1-gamma domain	3	2
CO dehydrogenase ISP C-domain like	Molybdenum cofactor-binding domain	3	3
FYVE/PHD zinc finger	SAICAR synthase-like	3	3
Oxidoreductase molybdopterin-binding domain	Riboflavin synthase domain-like	3	1
WRKY DNA-binding domain	P-loop containing nucleoside triphosphate hydrolases	3	3
WD40 repeat-like	DNase I-like	3	3
eIF2alpha middle domain-like	eIF-2-alpha, C-terminal domain	3	2
Nitrite/Sulfite reductase N-terminal domain-like	Nitrite and sulphite reductase 4Fe-4S domain-like	3	1
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	PRTase-like	3	1
FAD/NAD(P)-binding domain	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain	3	2
FYVE/PHD zinc finger	GroEL apical domain-like	3	3
ISP transmembrane anchor	ISP domain	3	2
GST C-terminal domain-like	eEF-1beta-like	3	3
Ribosomal protein S5 domain 2-like	Type II DNA topoisomerase	3	2
Oxysterol-binding protein-like	Oxysterol-binding protein-like	3	2
alpha-ketoacid dehydrogenase kinase, N-terminal domain	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	3	2
Ribosomal protein L6	Ribosomal protein L6	3	1
FYVE/PHD zinc finger	Chromo domain-like	3	2
L domain-like	Ribonuclease H-like	3	3
FAD/NAD(P)-binding domain	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain	3	2
Glutamyl tRNA-reductase catalytic, N-terminal domain	Glutamyl tRNA-reductase dimerization domain	3	1
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70	Elongation factor TFIIS domain 2	3	2
Surp module (SWAP domain)	Surp module (SWAP domain)	3	2
P-loop containing nucleoside triphosphate hydrolases	Smc hinge domain	3	3
FF domain	FF domain	3	3
Glutamyl tRNA-reductase catalytic, N-terminal domain	NAD(P)-binding Rossmann-fold domains	3	1
FMN-linked oxidoreductases	alpha-helical ferredoxin	3	2
Aldolase	Aminoacid dehydrogenase-like, N-terminal domain	3	3
FAD-binding/transporter-associated domain-like	CO dehydrogenase flavoprotein C-terminal domain-like	3	3
FAD-binding/transporter-associated domain-like	Molybdenum cofactor-binding domain	3	3
(Trans)glycosidases	P-loop containing nucleoside triphosphate hydrolases	3	3
E set domains	Riboflavin synthase domain-like	3	1
TPR-like	HSP20-like chaperones	3	3
P-loop containing nucleoside triphosphate hydrolases	HAD-like	3	3
P-loop containing nucleoside triphosphate hydrolases	Sec63 N-terminal domain-like	3	2
Zn-dependent exopeptidases	Zn-dependent exopeptidases	3	3
Metalloproteases ("zincins"), catalytic domain	HAD-like	2	2
Nucleotide-diphospho-sugar transferases	NTF2-like	2	1
Methylglyoxal synthase-like	Cytidine deaminase-like	2	2
GYF domain	RNA-binding domain, RBD	2	2
Chlorophyll a-b binding protein	Chlorophyll a-b binding protein	2	2
RING/U-box	BRCT domain	2	2
PapD-like	Ankyrin repeat	2	2
UBA-like	Elongation factor Ts (EF-Ts), dimerisation domain	2	2
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	2	2
TPR-like	FYVE/PHD zinc finger	2	2
Ferredoxin thioredoxin reductase (FTR), catalytic beta chain	Ferredoxin thioredoxin reductase (FTR), catalytic beta chain	2	2
Second domain of FERM	PH domain-like	2	2
Nucleic acid-binding proteins	eIF-2-alpha, C-terminal domain	2	1
L domain-like	NAD(P)-binding Rossmann-fold domains	2	2
Ribosomal protein S5 domain 2-like	Nucleic acid-binding proteins	2	2
Nucleotidyltransferase	TGS-like	2	2
ARM repeat	alpha/beta-Hydrolases	2	2
Adenine nucleotide alpha hydrolases-like	Adenine nucleotide alpha hydrolases-like	2	2
Ferredoxin reductase-like, C-terminal NADP-linked domain	Protein kinase-like (PK-like)	2	2
N-terminal domain of MutM-like DNA repair proteins	S13-like H2TH domain	2	2
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain	2	2
PA domain	RING/U-box	2	2
CCCH zinc finger	WD40 repeat-like	2	1
Protein kinase-like (PK-like)	Pectin lyase-like	2	2
Methionyl-tRNA synthetase (MetRS), Zn-domain	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	2	2
"Winged helix" DNA-binding domain	Protein kinase-like (PK-like)	2	2
P-loop containing nucleoside triphosphate hydrolases	HAND domain of the nucleosome remodeling ATPase ISWI	2	2
Tudor/PWWP/MBT	Protein kinase-like (PK-like)	2	2
Nucleic acid-binding proteins	Elongation factor Ts (EF-Ts), dimerisation domain	2	2
P-loop containing nucleoside triphosphate hydrolases	Ubiquitin-like	2	2
alpha/beta-Hydrolases	Ferredoxin reductase-like, C-terminal NADP-linked domain	2	2
Probable bacterial effector-binding domain	Probable bacterial effector-binding domain	2	2
(Trans)glycosidases	FAD-binding/transporter-associated domain-like	2	2
Class II aaRS and biotin synthetases	C-terminal domain of ProRS	2	2
FAD-binding/transporter-associated domain-like	RING/U-box	2	2
BRCT domain	Domain of poly(ADP-ribose) polymerase	2	2
Acid proteases	Acid proteases	2	2
F-box domain	ARM repeat	2	2
FYVE/PHD zinc finger	PUA domain-like	2	2
BRCT domain	FYVE/PHD zinc finger	2	2
Cyclophilin-like	Rubredoxin-like	2	2
Voltage-gated potassium channels	EF-hand	2	1
alpha/beta-Hydrolases	Protein kinase-like (PK-like)	2	2
Clavaminate synthase-like	Ribonuclease H-like	2	2
Nqo1 FMN-binding domain-like	Nqo1 middle domain-like	2	2
F-box domain	NTF2-like	2	2
PP2C-like	Bet v1-like	2	2
TPR-like	SET domain	2	2
Metalloproteases ("zincins"), catalytic domain	Metalloproteases ("zincins"), catalytic domain	2	2
L domain-like	(Trans)glycosidases	2	2
Homocysteine S-methyltransferase	Homocysteine S-methyltransferase	2	2
Concanavalin A-like lectins/glucanases	RING/U-box	2	2
UDP-Glycosyltransferase/glycogen phosphorylase	Ribosomal protein S5 domain 2-like	2	2
Pentein	Translation proteins SH3-like domain	2	1
RNA-binding domain, RBD	WW domain	2	2
SBT domain	UBC-like	2	2
S-adenosyl-L-methionine-dependent methyltransferases	PLP-dependent transferases	2	1
Adenine nucleotide alpha hydrolases-like	Molybdenum cofactor biosynthesis proteins	2	2
SBT domain	SBT domain	2	2
Adenine nucleotide alpha hydrolases-like	GMP synthetase C-terminal dimerisation domain	2	2
Putative cyclase	Putative cyclase	2	2
Class II aaRS and biotin synthetases	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)	2	2
Trypsin-like serine proteases	Trypsin-like serine proteases	2	2
PA domain	Transferrin receptor-like dimerisation domain	2	1
Quinoprotein alcohol dehydrogenase-like	Protein kinase-like (PK-like)	2	2
Nucleotidylyl transferase	Nucleic acid-binding proteins	2	2
PA domain	Zn-dependent exopeptidases	2	1
Nucleoside hydrolase	Nucleoside hydrolase	2	2
SWIB/MDM2 domain	eIF1-like	2	2
2Fe-2S ferredoxin-like	Formate dehydrogenase/DMSO reductase, domains 1-3	2	2
UDP-Glycosyltransferase/glycogen phosphorylase	S-adenosyl-L-methionine-dependent methyltransferases	2	2
Aconitase iron-sulfur domain	Aconitase iron-sulfur domain	2	2
P-loop containing nucleoside triphosphate hydrolases	BRCT domain	2	2
S-adenosyl-L-methionine-dependent methyltransferases	Ribonuclease H-like	2	2
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	Protein kinase-like (PK-like)	2	2
Acyl-CoA binding protein	Kelch motif	2	2
Cytochrome b5-like heme/steroid binding domain	Cytochrome b5-like heme/steroid binding domain	2	1
RNA-binding domain, RBD	HAD-like	2	2
PH domain-like	Prismane protein-like	2	2
Ribosomal L27 protein-like	Eukaryotic type KH-domain (KH-domain type I)	2	1
Thioredoxin-like	eEF1-gamma domain	2	1
Clavaminate synthase-like	RNA-binding domain, RBD	2	2
WD40 repeat-like	C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase	2	2
PYP-like sensor domain (PAS domain)	Kelch motif	2	2
N-terminal, heterodimerisation domain of RBP7 (RpoE)	Nucleic acid-binding proteins	2	2
Chromo domain-like	S-adenosyl-L-methionine-dependent methyltransferases	2	2
Protein kinase-like (PK-like)	PH domain-like	2	1
Tricorn protease N-terminal domain	DPP6 N-terminal domain-like	2	2
FAD/NAD(P)-binding domain	Nucleotide-binding domain	2	2
Nqo1 FMN-binding domain-like	Nqo1C-terminal domain-like	2	2
NAD(P)-binding Rossmann-fold domains	1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain	2	1
RNI-like	DNA/RNA polymerases	2	2
MFS general substrate transporter	P-loop containing nucleoside triphosphate hydrolases	2	2
NAD(P)-binding Rossmann-fold domains	S-adenosyl-L-methionine-dependent methyltransferases	2	2
Calponin-homology domain, CH-domain	EB1 dimerisation domain-like	2	2
Ypt/Rab-GAP domain of gyp1p	eIF1-like	2	2
HAD-like	Thioredoxin-like	2	2
Ran binding protein zinc finger-like	Leucine zipper domain	2	2
Kelch motif	Galactose oxidase, central domain	2	2
Rhodanese/Cell cycle control phosphatase	(Trans)glycosidases	2	2
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)	Translation proteins	2	2
Protein kinase-like (PK-like)	FYVE/PHD zinc finger	2	2
P-loop containing nucleoside triphosphate hydrolases	Inorganic pyrophosphatase	2	2
Protein kinase-like (PK-like)	Ribosomal proteins S24e, L23 and L15e	2	1
Calcyclin-binding protein-like	HSP20-like chaperones	2	1
SWIB/MDM2 domain	GYF domain	2	2
EF-hand	YhbY-like	2	2
Starch-binding domain-like	Phosphoglycerate mutase-like	2	1
NSFL1 (p97 ATPase) cofactor p47, SEP domain	Ubiquitin-like	2	2
Nucleic acid-binding proteins	UBA-like	2	2
P-loop containing nucleoside triphosphate hydrolases	Prismane protein-like	2	2
Ferredoxin thioredoxin reductase (FTR), catalytic beta chain	SAM/Pointed domain	2	2
YVTN repeat-like/Quinoprotein amine dehydrogenase	Quinoprotein alcohol dehydrogenase-like	2	2
Endosomal sorting complex assembly domain	VPS28 C-terminal domain-like	2	1
P-loop containing nucleoside triphosphate hydrolases	Ypt/Rab-GAP domain of gyp1p	2	2
ARM repeat	Aldolase	2	2
P-loop containing nucleoside triphosphate hydrolases	HRDC-like	2	2
Carbamate kinase-like	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	2	2
RNA-binding domain, RBD	CAD & PB1 domains	2	2
TPR-like	WD40 repeat-like	2	2
Type II DNA topoisomerase	Type II DNA topoisomerase	2	2
CCCH zinc finger	RING/U-box	2	2
Ribonuclease H-like	PLP-dependent transferases	2	2
NAC domain	GAT-like domain	2	2
SNARE-like	Domain of the SRP/SRP receptor G-proteins	2	2
Arp2/3 complex subunits	Arp2/3 complex subunits	2	2
P-loop containing nucleoside triphosphate hydrolases	TPR-like	2	2
F-box domain	P-loop containing nucleoside triphosphate hydrolases	2	2
FAD/NAD(P)-binding domain	Acetyl-CoA synthetase-like	2	2
PP2C-like	P-loop containing nucleoside triphosphate hydrolases	2	2
NAD(P)-binding Rossmann-fold domains	Actin-like ATPase domain	2	2
Tex N-terminal region-like	Nucleic acid-binding proteins	2	2
Creatinase/prolidase N-terminal domain	Creatinase/aminopeptidase	2	2
MOSC N-terminal domain-like	PK beta-barrel domain-like	2	1
PLP-dependent transferases	Ornithine decarboxylase C-terminal domain	2	2
Rhodanese/Cell cycle control phosphatase	alpha/beta-Hydrolases	2	2
DNA/RNA polymerases	WRKY DNA-binding domain	2	2
Class II aaRS and biotin synthetases	Translation proteins	2	2
P-loop containing nucleoside triphosphate hydrolases	Pre-protein crosslinking domain of SecA	2	2
Metallo-hydrolase/oxidoreductase	SAM/Pointed domain	2	2
Tropomyosin	Tropomyosin	2	2
ARM repeat	FabD/lysophospholipase-like	2	1
Staphylococcal nuclease	Tudor/PWWP/MBT	2	2
14-3-3 protein	14-3-3 protein	2	1
Carbamate kinase-like	Acyl-CoA N-acyltransferases (Nat)	2	2
Pectin lyase-like	Thiolase-like	2	2
RING/U-box	EF-hand	2	2
Cysteine proteinases	Cysteine proteinases	2	1
UDP-Glycosyltransferase/glycogen phosphorylase	GHMP Kinase, C-terminal domain	2	2
L domain-like	Ubiquitin-like	2	2
"Winged helix" DNA-binding domain	HLH, helix-loop-helix DNA-binding domain	2	2
P-loop containing nucleoside triphosphate hydrolases	Prokaryotic type KH domain (KH-domain type II)	2	2
Single hybrid motif	Single hybrid motif	2	1
Translation initiation factor IF3, N-terminal domain	Translation initiation factor IF3, C-terminal domain	2	2
(Trans)glycosidases	DNA/RNA polymerases	2	2
Ribonuclease H-like	(Trans)glycosidases	2	2
Ricin B-like lectins	Ricin B-like lectins	2	2
TPR-like	DNA/RNA polymerases	2	2
HMA, heavy metal-associated domain	Metal cation-transporting ATPase, ATP-binding domain N	2	2
PAZ domain	dsRNA-binding domain-like	2	2
Class I glutamine amidotransferase-like	GMP synthetase C-terminal dimerisation domain	2	2
P-loop containing nucleoside triphosphate hydrolases	Sm-like ribonucleoproteins	2	2
Plus3-like	GYF domain	2	2
P-loop containing nucleoside triphosphate hydrolases	Phosphoglycerate mutase-like	2	1
Amidase signature (AS) enzymes	TPR-like	2	1
Bet v1-like	Glucocorticoid receptor-like (DNA-binding domain)	2	2
alpha/beta-Hydrolases	CheY-like	2	2
Hypothetical protein TM0160	CRAL/TRIO N-terminal domain	2	1
F-box domain	SET domain	2	2
Class II aaRS and biotin synthetases	Anticodon-binding domain of PheRS	2	1
Surp module (SWAP domain)	Ubiquitin-like	2	1
MFS general substrate transporter	Homeodomain-like	2	2
Class II aaRS ABD-related	C-terminal domain of ProRS	2	2
Nucleotide-diphospho-sugar transferases	RNA-binding domain, RBD	2	1
Macro domain-like	Zn-dependent exopeptidases	2	2
GYF domain	SET domain	2	2
PreATP-grasp domain	PreATP-grasp domain	2	2
Thiamin diphosphate-binding fold (THDP-binding)	alpha/beta-Hydrolases	2	2
RING/U-box	N-terminal nucleophile aminohydrolases (Ntn hydrolases)	2	2
RNA-binding domain, RBD	Metallo-dependent phosphatases	2	2
Ubiquitin-like	HAD-like	2	2
Cyclophilin-like	TPR-like	2	1
Homeodomain-like	Protein kinase-like (PK-like)	2	2
Eukaryotic RPB5 N-terminal domain	RPB5-like RNA polymerase subunit	2	2
Glutathione synthetase ATP-binding domain-like	N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)	2	2
Rudiment single hybrid motif	Single hybrid motif	2	2
ARM repeat	WRKY DNA-binding domain	2	2
Quinoprotein alcohol dehydrogenase-like	Quinoprotein alcohol dehydrogenase-like	2	2
PreATP-grasp domain	ClpP/crotonase	2	2
Staphylococcal nuclease	Staphylococcal nuclease	2	2
Thioredoxin-like	ENT-like	2	1
DNA-binding domain	Thioredoxin-like	2	2
PUA domain-like	Ribosomal protein S5 domain 2-like	2	2
ARM repeat	MFS general substrate transporter	2	2
C2 domain (Calcium/lipid-binding domain, CaLB)	L domain-like	2	2
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	L domain-like	2	2
Diaminopimelate epimerase-like	Diaminopimelate epimerase-like	2	2
"Winged helix" DNA-binding domain	E set domains	2	1
Acid proteases	P-loop containing nucleoside triphosphate hydrolases	2	2
MurE/MurF N-terminal domain	MurD-like peptide ligases, peptide-binding domain	2	2
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	Nucleic acid-binding proteins	2	2
GroEL-intermediate domain like	GroEL-intermediate domain like	2	2
HIT/MYND zinc finger-like	Cysteine proteinases	2	2
BEACH domain	ARM repeat	2	2
ATP-dependent DNA ligase DNA-binding domain	DNA ligase/mRNA capping enzyme, catalytic domain	2	2
Galactose oxidase, central domain	Metallo-dependent phosphatases	2	2
Methionyl-tRNA synthetase (MetRS), Zn-domain	Nucleic acid-binding proteins	2	2
EF-hand	Leucine zipper domain	2	1
Hypothetical protein SAV1430	Fe-S cluster assembly (FSCA) domain-like	2	1
RING/U-box	"Winged helix" DNA-binding domain	2	2
Methionyl-tRNA synthetase (MetRS), Zn-domain	Nucleotidylyl transferase	2	2
Calponin-homology domain, CH-domain	NAD(P)-binding Rossmann-fold domains	2	1
Tex N-terminal region-like	Ribonuclease H-like	2	2
Formin homology 2 domain (FH2 domain)	Ribonuclease H-like	2	2
Ribonuclease H-like	SH2 domain	2	2
Carbamate kinase-like	NAD(P)-binding Rossmann-fold domains	2	2
Bromodomain	Protein kinase-like (PK-like)	2	2
NAD(P)-linked oxidoreductase	NAD(P)-linked oxidoreductase	2	2
PreATP-grasp domain	N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)	2	2
HMG-box	HMG-box	2	2
(Trans)glycosidases	FAD-linked oxidases, C-terminal domain	2	2
PapD-like	PapD-like	2	2
(Trans)glycosidases	F-box domain	2	2
ARM repeat	RNA-binding domain, RBD	2	2
Ribonuclease H-like	Mannose-binding lectins	2	2
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain	2	1
Pentein	Nucleic acid-binding proteins	2	1
Second domain of FERM	Prismane protein-like	2	2
Ribonuclease H-like	ENTH/VHS domain	2	2
Myosin rod fragments	Tropomyosin	2	2
HAD-like	NHL repeat	2	2
Ribonuclease PH domain 2-like	Nucleic acid-binding proteins	2	2
ARM repeat	POZ domain	2	2
P-loop containing nucleoside triphosphate hydrolases	Helical scaffold and wing domains of SecA	2	2
RNA-binding domain, RBD	Protein kinase-like (PK-like)	2	2
CBS-domain pair	Inosine monophosphate dehydrogenase (IMPDH)	2	2
SET domain	SET domain	2	2
Ribosomal protein L4	S-adenosyl-L-methionine-dependent methyltransferases	2	1
P-loop containing nucleoside triphosphate hydrolases	Zn-binding ribosomal proteins	2	2
RuvA domain 2-like	SH2 domain	2	2
UBA-like	P-loop containing nucleoside triphosphate hydrolases	2	2
Concanavalin A-like lectins/glucanases	P-loop containing nucleoside triphosphate hydrolases	2	2
Seven-hairpin glycosidases	Prefoldin	2	1
Glutathione synthetase ATP-binding domain-like	Single hybrid motif	2	2
Protein kinase-like (PK-like)	Clavaminate synthase-like	2	2
RNA-binding domain, RBD	TPR-like	2	2
RNA-binding domain, RBD	Multidrug resistance efflux transporter EmrE	2	2
Thioredoxin-like	ERP29 C domain-like	2	1
Galactose mutarotase-like	Starch-binding domain-like	2	2
cAMP-binding domain-like	cAMP-binding domain-like	2	2
HAND domain of the nucleosome remodeling ATPase ISWI	Homeodomain-like	2	2
RNI-like	Ribonuclease H-like	2	2
Aminoacid dehydrogenase-like, N-terminal domain	Aminoacid dehydrogenase-like, N-terminal domain	2	2
DNA-binding pseudobarrel domain	ssDNA-binding transcriptional regulator domain	2	2
PreATP-grasp domain	Single hybrid motif	2	2
ARM repeat	PH domain-like	2	2
Coproporphyrinogen III oxidase	Protein kinase-like (PK-like)	2	2
Outer arm dynein light chain 1	Protein kinase-like (PK-like)	2	2
C2 domain (Calcium/lipid-binding domain, CaLB)	Protein kinase-like (PK-like)	2	2
BRCT domain	WGR domain-like	2	2
R1 subunit of ribonucleotide reductase, N-terminal domain	PFL-like glycyl radical enzymes	2	1
Ribonuclease H-like	Ubiquitin-like	2	2
P-loop containing nucleoside triphosphate hydrolases	CYTH-like phosphatases	2	2
Nucleotide-diphospho-sugar transferases	alpha/beta-Hydrolases	2	2
L9 N-domain-like	Ribosomal protein L9 C-domain	2	2
Trimeric LpxA-like enzymes	Trimeric LpxA-like enzymes	2	2
tRNA-binding arm	Class II aaRS and biotin synthetases	2	2
Cytochrome P450	Histidine-containing phosphotransfer domain, HPT domain	2	2
NAC domain	RING/U-box	2	2
Cap-Gly domain	Ubiquitin-like	2	2
Translational machinery components	Translational machinery components	2	2
Ribonuclease H-like	F-box domain	2	2
alpha/beta-Hydrolases	Homeodomain-like	2	2
Nucleic acid-binding proteins	eIF2alpha middle domain-like	2	1
Acyl-CoA binding protein	Ankyrin repeat	2	2
Tex N-terminal region-like	SH2 domain	2	2
PH domain-like	WD40 repeat-like	2	2
Ubiquitin-like	Hect, E3 ligase catalytic domain	2	2
Ribonuclease H-like	MFS general substrate transporter	2	2
RING/U-box	UBA-like	2	2
RuvA domain 2-like	Nucleic acid-binding proteins	2	2
Ubiquitin-like	ARM repeat	2	1
Arabinanase/levansucrase/invertase	Arabinanase/levansucrase/invertase	2	2
BRCT domain	ADP-ribosylation	2	2
ALDH-like	DNA/RNA polymerases	2	2
Actin-crosslinking proteins	Actin-crosslinking proteins	2	2
F-box domain	LysM domain	2	1
ThrRS/AlaRS common domain	Class II aaRS ABD-related	2	2
DNA/RNA polymerases	Preprotein translocase SecY subunit	2	2
L domain-like	HSP20-like chaperones	2	2
"Winged helix" DNA-binding domain	Sec63 N-terminal domain-like	2	1
Protein kinase-like (PK-like)	E set domains	2	2
Ribonuclease H-like	RuvA domain 2-like	2	2
Beta-D-glucan exohydrolase, C-terminal domain	FAD-binding/transporter-associated domain-like	2	2
Protein kinase-like (PK-like)	Nucleotidylyl transferase	2	2
Translation proteins	ThrRS/AlaRS common domain	2	2
Beta-D-glucan exohydrolase, C-terminal domain	FAD-linked oxidases, C-terminal domain	2	2
Aminopeptidase/glucanase lid domain	Zn-dependent exopeptidases	2	1
RING/U-box	Cyclophilin-like	2	2
Ubiquitin-like	DNA/RNA polymerases	2	2
Tubulin nucleotide-binding domain-like	Tubulin nucleotide-binding domain-like	2	2
P-loop containing nucleoside triphosphate hydrolases	FAS1 domain	2	2
Pre-protein crosslinking domain of SecA	Helical scaffold and wing domains of SecA	2	2
HD-domain/PDEase-like	TGS-like	2	2
SNARE-like	SNARE-like	2	2
Class I glutamine amidotransferase-like	Adenine nucleotide alpha hydrolases-like	2	2
Cytidine deaminase-like	Dihydrofolate reductase-like	2	2
Ribonuclease PH domain 2-like	Ribonuclease PH domain 2-like	2	2
P-loop containing nucleoside triphosphate hydrolases	alpha/beta-Hydrolases	2	2
NAD(P)-binding Rossmann-fold domains	Succinyl-CoA synthetase domains	2	2
CCCH zinc finger	S-adenosyl-L-methionine-dependent methyltransferases	2	2
MurE/MurF N-terminal domain	MurD-like peptide ligases, catalytic domain	2	2
Nucleic acid-binding proteins	Homeodomain-like	2	2
3-carboxy-cis,cis-mucoante lactonizing enzyme	RNA-binding domain, RBD	2	2
Leukotriene A4 hydrolase N-terminal domain	ARM repeat	2	2
UBC-like	DNA-binding domain	2	2
Hypothetical protein TM0160	CRAL/TRIO domain	2	1
Ubiquitin-like	PUG domain-like	2	2
F-box domain	L domain-like	2	2
beta-Galactosidase/glucuronidase domain	(Trans)glycosidases	2	2
PRP4-like	Functional domain of the splicing factor Prp18	2	2
Clavaminate synthase-like	DNA/RNA polymerases	2	2
Tryptophan synthase beta subunit-like PLP-dependent enzymes	S13-like H2TH domain	2	2
C-terminal, gelsolin-like domain of Sec23/24	C-terminal, gelsolin-like domain of Sec23/24	2	2
L domain-like	RING/U-box	2	2
alpha/beta-Hydrolases	Riboflavin synthase domain-like	2	2
Acetyl-CoA synthetase-like	N-terminal nucleophile aminohydrolases (Ntn hydrolases)	2	2
Eukaryotic type KH-domain (KH-domain type I)	RNA-binding domain, RBD	2	2
Protein kinase-like (PK-like)	RmlC-like cupins	2	2
E2F-DP heterodimerization region	E2F-DP heterodimerization region	2	2
F-box domain	Actin-like ATPase domain	2	2
Concanavalin A-like lectins/glucanases	HMA, heavy metal-associated domain	2	2
Alpha-L RNA-binding motif	Pseudouridine synthase	2	2
P-loop containing nucleoside triphosphate hydrolases	WD40 repeat-like	2	2
Six-hairpin glycosidases	Six-hairpin glycosidases	2	2
Folate-binding domain	Aminomethyltransferase beta-barrel domain	2	2
WD40 repeat-like	DNA/RNA polymerases	2	2
DEK C-terminal domain	SWIB/MDM2 domain	2	2
Ribokinase-like	Ribokinase-like	2	1
PurM N-terminal domain-like	PurM C-terminal domain-like	2	2
L domain-like	FabD/lysophospholipase-like	2	1
Chaperone J-domain	Thioredoxin-like	2	2
Phosphoglycerate mutase-like	Phosphoglycerate mutase-like	2	1
HLH, helix-loop-helix DNA-binding domain	Formin homology 2 domain (FH2 domain)	2	2
PH domain-like	BEACH domain	2	2
Carbamate kinase-like	ALDH-like	2	2
NAC domain	ENTH/VHS domain	2	2
SH2 domain	SH2 domain	2	2
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)	ThrRS/AlaRS common domain	2	2
Nqo1 middle domain-like	Nqo1C-terminal domain-like	2	2
RNA-binding domain, RBD	S-adenosyl-L-methionine-dependent methyltransferases	2	2
Ribonuclease H-like	HRDC-like	2	2
Nucleic acid-binding proteins	SH2 domain	2	2
ALDH-like	ALDH-like	2	2
Terpenoid cyclases/Protein prenyltransferases	Cytochrome P450	2	2
Metalloproteases ("zincins"), catalytic domain	ARM repeat	2	2
Tex N-terminal region-like	RuvA domain 2-like	2	2
DNA clamp	DNA clamp	2	2
Leucine zipper domain	AlbA-like	2	2
ARM repeat	Glucocorticoid receptor-like (DNA-binding domain)	2	2
Chromo domain-like	Homeodomain-like	2	1
Calponin-homology domain, CH-domain	Calponin-homology domain, CH-domain	2	2
RING/U-box	TPR-like	2	2
ACT-like	Protein kinase-like (PK-like)	2	2
Sec63 N-terminal domain-like	Sec63 N-terminal domain-like	2	1
Ubiquitin-like	TPR-like	2	2
Adenine nucleotide alpha hydrolases-like	P-loop containing nucleoside triphosphate hydrolases	2	2
Second domain of FERM	P-loop containing nucleoside triphosphate hydrolases	2	2
Homeodomain-like	RNA-binding domain, RBD	2	2
ACT-like	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	2	2
4Fe-4S ferredoxins	P-loop containing nucleoside triphosphate hydrolases	2	2
PDZ domain-like	TPR-like	2	2
Nucleotidylyl transferase	Ribosomal protein L25-like	2	2
Galactose-binding domain-like	beta-Galactosidase/glucuronidase domain	2	2
FAD/NAD(P)-binding domain	Thioredoxin-like	2	2
F-box domain	Ankyrin repeat	2	2
Dimeric alpha+beta barrel	Dimeric alpha+beta barrel	2	1
BAG domain	ARM repeat	2	1
SSo0622-like	Kelch motif	1	1
E set domains	NAD(P)-binding Rossmann-fold domains	1	1
S-adenosyl-L-methionine-dependent methyltransferases	HCP-like	1	1
NSFL1 (p97 ATPase) cofactor p47, SEP domain	TPR-like	1	1
Clathrin heavy-chain terminal domain	Clathrin heavy-chain terminal domain	1	1
UDP-Glycosyltransferase/glycogen phosphorylase	Allene oxide cyclase-like	1	1
ATP12-like	Tubulin C-terminal domain-like	1	1
Cap-Gly domain	L domain-like	1	1
HMG-box	WRKY DNA-binding domain	1	1
NTF2-like	NAD(P)-binding Rossmann-fold domains	1	1
Bromodomain	Ribonuclease H-like	1	1
alpha/beta-Hydrolases	Cyclin-like	1	1
FMN-linked oxidoreductases	Acetyl-CoA synthetase-like	1	1
Chelatase	Ubiquitin-like	1	1
SRF-like	SRF-like	1	1
Actin-like ATPase domain	GroEL equatorial domain-like	1	1
Phosphoglycerate mutase-like	FKBP-like	1	1
Preprotein translocase SecY subunit	E set domains	1	1
Nucleotide-diphospho-sugar transferases	EF-hand	1	1
NTF2-like	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain	1	1
Nucleic acid-binding proteins	alpha/beta-Hydrolases	1	1
Type II DNA topoisomerase	F-box domain	1	1
Ribosomal protein S5 domain 2-like	S-adenosyl-L-methionine-dependent methyltransferases	1	1
DEK C-terminal domain	Histone-fold	1	1
RING/U-box	ArfGap/RecO-like zinc finger	1	1
Protein kinase-like (PK-like)	RplX-like	1	1
L domain-like	HD-domain/PDEase-like	1	1
EreA/ChaN-like	alpha-D-mannose-specific plant lectins	1	1
UBC-like	Formate/glycerate dehydrogenase catalytic domain-like	1	1
Barwin-like endoglucanases	Ribosomal protein S18	1	1
Leucine zipper domain	Thiamin diphosphate-binding fold (THDP-binding)	1	1
ARM repeat	UBC-like	1	1
beta-lactamase/transpeptidase-like	Tautomerase/MIF	1	1
S-adenosylmethionine synthetase	Pectin lyase-like	1	1
C2 domain (Calcium/lipid-binding domain, CaLB)	Cupredoxins	1	1
Retrovirus zinc finger-like domains	Osmotin, thaumatin-like protein	1	1
Nop domain	ARM repeat	1	1
Tudor/PWWP/MBT	Multidrug resistance efflux transporter EmrE	1	1
PAZ domain	F1F0 ATP synthase subunit C	1	1
Glucocorticoid receptor-like (DNA-binding domain)	Domain of poly(ADP-ribose) polymerase	1	1
Chaperone J-domain	Arginase/deacetylase	1	1
Rhodanese/Cell cycle control phosphatase	Actin-like ATPase domain	1	1
dsRNA-binding domain-like	HSP20-like chaperones	1	1
CCCH zinc finger	HIT-like	1	1
ARM repeat	Cyclin-like	1	1
DNA-glycosylase	Nudix	1	1
P-loop containing nucleoside triphosphate hydrolases	Obg GTP-binding protein C-terminal domain	1	1
HLH, helix-loop-helix DNA-binding domain	DNA clamp	1	1
Ribosomal protein L16p/L10e	RING/U-box	1	1
Composite domain of metallo-dependent hydrolases	Composite domain of metallo-dependent hydrolases	1	1
S-adenosyl-L-methionine-dependent methyltransferases	Putative methyltransferase TM0872, insert domain	1	1
ARM repeat	FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)	1	1
P-domain of calnexin/calreticulin	Leucine zipper domain	1	1
POZ domain	Pentapeptide repeat-like	1	1
Carbamate kinase-like	Carbamate kinase-like	1	1
t-snare proteins	EF-G C-terminal domain-like	1	1
Ribonuclease H-like	Eukaryotic type KH-domain (KH-domain type I)	1	1
S-adenosyl-L-methionine-dependent methyltransferases	FAD/NAD(P)-binding domain	1	1
EF-hand	Formin homology 2 domain (FH2 domain)	1	1
Nucleotidylyl transferase	An anticodon-binding domain of class I aminoacyl-tRNA synthetases	1	1
Calcium ATPase, transduction domain A	(Trans)glycosidases	1	1
RNI-like	Histone-fold	1	1
FGAM synthase PurL, linker domain	Class I glutamine amidotransferase-like	1	1
Acyl-CoA dehydrogenase NM domain-like	Thioredoxin-like	1	1
Enolase N-terminal domain-like	alpha/beta-Hydrolases	1	1
UDP-Glycosyltransferase/glycogen phosphorylase	Ribonuclease H-like	1	1
UBC-like	DnaJ/Hsp40 cysteine-rich domain	1	1
UBC-like	HSP40/DnaJ peptide-binding domain	1	1
Class II aaRS and biotin synthetases	Homeodomain-like	1	1
Ankyrin repeat	Ran binding protein zinc finger-like	1	1
"Winged helix" DNA-binding domain	Ankyrin repeat	1	1
Ribosomal proteins S24e, L23 and L15e	Chaperone J-domain	1	1
FAD/NAD(P)-binding domain	SBT domain	1	1
Class II aaRS and biotin synthetases	Mog1p/PsbP-like	1	1
PUA domain-like	PUA domain-like	1	1
Chaperone J-domain	CSL zinc finger	1	1
WD40 repeat-like	Formin homology 2 domain (FH2 domain)	1	1
UDP-Glycosyltransferase/glycogen phosphorylase	Metallo-hydrolase/oxidoreductase	1	1
Concanavalin A-like lectins/glucanases	FYVE/PHD zinc finger	1	1
Ribonuclease H-like	Cysteine proteinases	1	1
Translation proteins	PP2C-like	1	1
FAS1 domain	Ribonuclease H-like	1	1
UDP-Glycosyltransferase/glycogen phosphorylase	Calcium-dependent phosphotriesterase	1	1
Retrovirus zinc finger-like domains	PX domain	1	1
Ubiquitin-like	(Trans)glycosidases	1	1
AlbA-like	GST C-terminal domain-like	1	1
P-loop containing nucleoside triphosphate hydrolases	RuvA domain 2-like	1	1
alpha-D-mannose-specific plant lectins	RplX-like	1	1
Homeodomain-like	Nucleotide-diphospho-sugar transferases	1	1
Cyclophilin-like	HSP40/DnaJ peptide-binding domain	1	1
Acid proteases	WRKY DNA-binding domain	1	1
(Trans)glycosidases	CBS-domain pair	1	1
PDZ domain-like	E set domains	1	1
SAP domain	F-box domain	1	1
Galactose mutarotase-like	Galactose mutarotase-like	1	1
Arabinanase/levansucrase/invertase	TPR-like	1	1
NAD(P)-binding Rossmann-fold domains	Nucleotidyltransferase	1	1
cAMP-binding domain-like	Protein kinase-like (PK-like)	1	1
PA domain	P-loop containing nucleoside triphosphate hydrolases	1	1
TPR-like	Glycerol-3-phosphate (1)-acyltransferase	1	1
Formin homology 2 domain (FH2 domain)	CBS-domain pair	1	1
t-snare proteins	Ribosomal protein S5 domain 2-like	1	1
Glycerol-3-phosphate (1)-acyltransferase	MFS general substrate transporter	1	1
DNA/RNA polymerases	Seven-hairpin glycosidases	1	1
Chaperone J-domain	alpha/beta knot	1	1
Nucleotidyltransferase	Protein kinase-like (PK-like)	1	1
Protein kinase-like (PK-like)	Trimeric LpxA-like enzymes	1	1
Thioredoxin-like	Homeodomain-like	1	1
Heme-dependent peroxidases	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain	1	1
Metallo-hydrolase/oxidoreductase	Metallo-hydrolase/oxidoreductase	1	1
Protein kinase-like (PK-like)	Acyl-CoA dehydrogenase C-terminal domain-like	1	1
Protein kinase-like (PK-like)	LexA/Signal peptidase	1	1
alpha/beta-Hydrolases	(Trans)glycosidases	1	1
S-adenosyl-L-methionine-dependent methyltransferases	NAP-like	1	1
L domain-like	FMN-linked oxidoreductases	1	1
alpha-D-mannose-specific plant lectins	Rhomboid-like	1	1
Periplasmic binding protein-like II	Ubiquitin-like	1	1
C-terminal, gelsolin-like domain of Sec23/24	(Trans)glycosidases	1	1
Concanavalin A-like lectins/glucanases	BEACH domain	1	1
Ypt/Rab-GAP domain of gyp1p	DNA/RNA polymerases	1	1
Actin-like ATPase domain	Beta-D-glucan exohydrolase, C-terminal domain	1	1
HAD-like	NTF2-like	1	1
Radical SAM enzymes	Radical SAM enzymes	1	1
Phosphoenolpyruvate/pyruvate domain	HMA, heavy metal-associated domain	1	1
alpha/beta-Hydrolases	DNase I-like	1	1
MurD-like peptide ligases, catalytic domain	JAB1/MPN domain	1	1
Lipocalins	Lipocalins	1	1
GroEL apical domain-like	Mitochondrial carrier	1	1
(Phosphotyrosine protein) phosphatases II	Nucleic acid-binding proteins	1	1
Metallo-dependent phosphatases	DNA-binding domain	1	1
BRCT domain	Acid proteases	1	1
Plant invertase/pectin methylesterase inhibitor	Ran binding protein zinc finger-like	1	1
CoA-dependent acyltransferases	Acid proteases	1	1
Mss4-like	Tubulin C-terminal domain-like	1	1
Thioredoxin-like	Cytochrome P450	1	1
MFS general substrate transporter	Acid phosphatase/Vanadium-dependent haloperoxidase	1	1
SRF-like	TPR-like	1	1
HMA, heavy metal-associated domain	PHP domain-like	1	1
Kelch motif	AlbA-like	1	1
Amidase signature (AS) enzymes	Ribonuclease H-like	1	1
Homeodomain-like	Multidrug resistance efflux transporter EmrE	1	1
Hect, E3 ligase catalytic domain	Hect, E3 ligase catalytic domain	1	1
Riboflavin synthase domain-like	MFS general substrate transporter	1	1
SAP domain	Domain of poly(ADP-ribose) polymerase	1	1
Subtilisin-like	Subtilisin-like	1	1
FAD-linked reductases, C-terminal domain	FMN-binding split barrel	1	1
DNA/RNA polymerases	NTF2-like	1	1
Nucleotide-diphospho-sugar transferases	Cryptochrome/photolyase, N-terminal domain	1	1
Protein kinase-like (PK-like)	DLC	1	1
DNA/RNA polymerases	Carbamate kinase-like	1	1
PHL pollen allergen	Protein kinase-like (PK-like)	1	1
RNA-binding domain, RBD	GST C-terminal domain-like	1	1
Osmotin, thaumatin-like protein	Osmotin, thaumatin-like protein	1	1
BEACH domain	Protein kinase-like (PK-like)	1	1
Ribosomal protein S5 domain 2-like	DNA mismatch repair protein MutL	1	1
Ribosomal protein S5 domain 2-like	Eukaryotic type KH-domain (KH-domain type I)	1	1
MAL13P1.257-like	Zn-dependent exopeptidases	1	1
RING/U-box	F-box domain	1	1
TPR-like	MFS general substrate transporter	1	1
Tudor/PWWP/MBT	RNA-binding domain, RBD	1	1
FKBP-like	Triger factor/SurA peptide-binding domain-like	1	1
Translation proteins	PRC-barrel domain	1	1
P-loop containing nucleoside triphosphate hydrolases	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	1	1
Acid proteases	Fe-only hydrogenase	1	1
Protein kinase-like (PK-like)	Formin homology 2 domain (FH2 domain)	1	1
Chaperone J-domain	Ribulose-phoshate binding barrel	1	1
Protein kinase-like (PK-like)	Rhodanese/Cell cycle control phosphatase	1	1
ENT-like	ENT-like	1	1
Ribonuclease H-like	Glutamine synthetase/guanido kinase	1	1
CBS-domain pair	NAD(P)-binding Rossmann-fold domains	1	1
Amine oxidase N-terminal region	Thiamin diphosphate-binding fold (THDP-binding)	1	1
SRF-like	Ferredoxin reductase-like, C-terminal NADP-linked domain	1	1
LexA/Signal peptidase	Clavaminate synthase-like	1	1
Thioredoxin-like	Tubulin C-terminal domain-like	1	1
EF-hand	MFS general substrate transporter	1	1
Heme-dependent peroxidases	CAD & PB1 domains	1	1
NTF2-like	Probable bacterial effector-binding domain	1	1
WD40 repeat-like	Calcium-dependent phosphotriesterase	1	1
P-loop containing nucleoside triphosphate hydrolases	Calcium ATPase, transduction domain A	1	1
Carbamoyl phosphate synthetase, small subunit N-terminal domain	Class I glutamine amidotransferase-like	1	1
Pectin lyase-like	Smc hinge domain	1	1
NAD(P)-binding Rossmann-fold domains	PK beta-barrel domain-like	1	1
alpha/beta-Hydrolases	Saposin	1	1
Six-hairpin glycosidases	TPR-like	1	1
DNA/RNA polymerases	HAD-like	1	1
FMN-dependent nitroreductase-like	FMN-dependent nitroreductase-like	1	1
Creatinase/aminopeptidase	NAD(P)-linked oxidoreductase	1	1
Subtilisin-like	Osmotin, thaumatin-like protein	1	1
Thioredoxin-like	Nqo1 FMN-binding domain-like	1	1
GroEL-intermediate domain like	Cysteine proteinases	1	1
PAZ domain	PAZ domain	1	1
Glutamine synthetase/guanido kinase	GatB/YqeY motif	1	1
NAC domain	PP2C-like	1	1
Periplasmic binding protein-like II	WD40 repeat-like	1	1
Tropomyosin	Thioesterase/thiol ester dehydrase-isomerase	1	1
PP2C-like	Coiled-coil domain of nucleotide exchange factor GrpE	1	1
UBA-like	TPR-like	1	1
Ankyrin repeat	Acid proteases	1	1
Protein kinase-like (PK-like)	CoaB-like	1	1
Zn-finger domain of Sec23/24	ARM repeat	1	1
PUA domain-like	Protein kinase-like (PK-like)	1	1
AlbA-like	Release factor	1	1
RNA-binding domain, RBD	alpha/beta-Hydrolases	1	1
"Winged helix" DNA-binding domain	Pectin lyase-like	1	1
GroEL equatorial domain-like	Galactose mutarotase-like	1	1
Sec63 N-terminal domain-like	DNA/RNA polymerases	1	1
Glucocorticoid receptor-like (DNA-binding domain)	GroEL equatorial domain-like	1	1
NAD(P)-binding Rossmann-fold domains	Mitochondrial carrier	1	1
Metallo-hydrolase/oxidoreductase	ATP-dependent DNA ligase DNA-binding domain	1	1
Metallo-hydrolase/oxidoreductase	P-loop containing nucleoside triphosphate hydrolases	1	1
Thiolase-like	RING/U-box	1	1
Nucleic acid-binding proteins	Ribosomal protein S3 C-terminal domain	1	1
Cyclophilin-like	PP2C-like	1	1
Mitochondrial carrier	Cytochrome P450	1	1
RmlC-like cupins	ARM repeat	1	1
Clavaminate synthase-like	NAD(P)-binding Rossmann-fold domains	1	1
GroES-like	Mitochondrial carrier	1	1
Subdomain of clathrin and coatomer appendage domain	Subdomain of clathrin and coatomer appendage domain	1	1
Double Clp-N motif	Taf5 N-terminal domain-like	1	1
ENTH/VHS domain	ENTH/VHS domain	1	1
Heme oxygenase-like	Heme oxygenase-like	1	1
Rap30/74 interaction domains	Rap30/74 interaction domains	1	1
L domain-like	Nucleic acid-binding proteins	1	1
Tudor/PWWP/MBT	DNA repair protein MutS, domain I	1	1
Succinyl-CoA synthetase domains	Pectin lyase-like	1	1
Urease, gamma-subunit	Metallo-dependent hydrolases	1	1
Protein kinase-like (PK-like)	Ribosomal protein S5 domain 2-like	1	1
Bromodomain	alpha/beta-Hydrolases	1	1
AF0104/ALDC/Ptd012-like	RING/U-box	1	1
Cullin repeat-like	Terpenoid synthases	1	1
HAD-like	NAD(P)-binding Rossmann-fold domains	1	1
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70	LuxS/MPP-like metallohydrolase	1	1
RNA-binding domain, RBD	beta-sandwich domain of Sec23/24	1	1
Alpha-L RNA-binding motif	S-adenosyl-L-methionine-dependent methyltransferases	1	1
Chlorophyll a-b binding protein	FMN-linked oxidoreductases	1	1
Restriction endonuclease-like	RuvA domain 2-like	1	1
HAD-like	(Trans)glycosidases	1	1
HSP20-like chaperones	LEA14-like	1	1
WD40 repeat-like	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	1	1
t-snare proteins	Translation proteins	1	1
UBC-like	Quinoprotein alcohol dehydrogenase-like	1	1
Quinoprotein alcohol dehydrogenase-like	C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase	1	1
SMAD/FHA domain	BRCT domain	1	1
C2 domain (Calcium/lipid-binding domain, CaLB)	UDP-Glycosyltransferase/glycogen phosphorylase	1	1
Zn-dependent exopeptidases	Translational machinery components	1	1
beta and beta-prime subunits of DNA dependent RNA-polymerase	GroES-like	1	1
FAD-linked reductases, C-terminal domain	SBT domain	1	1
TGS-like	ThrRS/AlaRS common domain	1	1
PLP-dependent transferases	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain	1	1
JAB1/MPN domain	HCP-like	1	1
Bromodomain	Chromo domain-like	1	1
Eukaryotic type KH-domain (KH-domain type I)	(Trans)glycosidases	1	1
ClpP/crotonase	ClpS-like	1	1
BRCT domain	DNA polymerase beta, N-terminal domain-like	1	1
FYVE/PHD zinc finger	SWIB/MDM2 domain	1	1
PsbU/PolX domain-like	Nucleotidyltransferase	1	1
Ran binding protein zinc finger-like	AlbA-like	1	1
PRC-barrel domain	PRC-barrel domain	1	1
GroEL apical domain-like	GroEL apical domain-like	1	1
RING/U-box	Leucine zipper domain	1	1
Translation proteins SH3-like domain	WRKY DNA-binding domain	1	1
P-loop containing nucleoside triphosphate hydrolases	HIT/MYND zinc finger-like	1	1
Cyclophilin-like	Chaperone J-domain	1	1
Ankyrin repeat	GroEL equatorial domain-like	1	1
ARM repeat	Ribosomal protein L32e	1	1
EF-hand	DNA-binding domain of EIN3-like	1	1
Cysteine proteinases	TAZ domain	1	1
C2 domain (Calcium/lipid-binding domain, CaLB)	HCP-like	1	1
HLH, helix-loop-helix DNA-binding domain	Homeodomain-like	1	1
F-box domain	Terpenoid cyclases/Protein prenyltransferases	1	1
Periplasmic binding protein-like II	Voltage-gated potassium channels	1	1
Ribosomal protein S5 domain 2-like	E set domains	1	1
TGS-like	Class II aaRS and biotin synthetases	1	1
Class II aaRS and biotin synthetases	P-loop containing nucleoside triphosphate hydrolases	1	1
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	Carbon-nitrogen hydrolase	1	1
RNA-binding domain, RBD	Ankyrin repeat	1	1
CRAL/TRIO N-terminal domain	PUA domain-like	1	1
Pre-PUA domain	PUA domain-like	1	1
Acyl-CoA N-acyltransferases (Nat)	S-adenosyl-L-methionine-dependent methyltransferases	1	1
FAD-linked oxidases, C-terminal domain	S-adenosyl-L-methionine-dependent methyltransferases	1	1
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	ARM repeat	1	1
Prokaryotic type KH domain (KH-domain type II)	(Trans)glycosidases	1	1
SNARE-like	DNase I-like	1	1
UDP-Glycosyltransferase/glycogen phosphorylase	HSP20-like chaperones	1	1
HSP40/DnaJ peptide-binding domain	HSC20 (HSCB), C-terminal oligomerisation domain	1	1
RNI-like	Nucleotide-diphospho-sugar transferases	1	1
beta and beta-prime subunits of DNA dependent RNA-polymerase	RplX-like	1	1
UBC-like	Chaperone J-domain	1	1
vWA-like	ARM repeat	1	1
(Trans)glycosidases	MurD-like peptide ligases, catalytic domain	1	1
Thioredoxin-like	HMA, heavy metal-associated domain	1	1
F-box domain	Heat shock protein 70kD (HSP70), peptide-binding domain	1	1
PIN domain-like	C-terminal autoproteolytic domain of nucleoporin nup98	1	1
P-loop containing nucleoside triphosphate hydrolases	Glucocorticoid receptor-like (DNA-binding domain)	1	1
lambda repressor-like DNA-binding domains	Cyanase C-terminal domain	1	1
SMAD/FHA domain	Aldolase	1	1
Homeodomain-like	WD40 repeat-like	1	1
CRAL/TRIO domain	Sec1/munc18-like (SM) proteins	1	1
(Phosphotyrosine protein) phosphatases II	NAD kinase/diacylglycerol kinase-like	1	1
CheY-like	TPR-like	1	1
C-terminal, gelsolin-like domain of Sec23/24	ARM repeat	1	1
WRKY DNA-binding domain	DNA-binding pseudobarrel domain	1	1
GroEL apical domain-like	RING/U-box	1	1
Chitinase insertion domain	DNA/RNA polymerases	1	1
UBC-like	Protein kinase-like (PK-like)	1	1
Oxysterol-binding protein-like	Ubiquitin-like	1	1
NAD(P)-binding Rossmann-fold domains	Heat shock protein 70kD (HSP70), C-terminal subdomain	1	1
CCCH zinc finger	DNA/RNA polymerases	1	1
Formyltransferase	DNA/RNA polymerases	1	1
CBS-domain pair	RNA-binding domain, RBD	1	1
Translation proteins	Sm-like ribonucleoproteins	1	1
FAD/NAD(P)-binding domain	F-box domain	1	1
Histone-fold	PLP-dependent transferases	1	1
Arabinanase/levansucrase/invertase	S-adenosyl-L-methionine-dependent methyltransferases	1	1
Retrovirus zinc finger-like domains	Single hybrid motif	1	1
Nucleotide-diphospho-sugar transferases	PP2C-like	1	1
ARM repeat	Ribonuclease H-like	1	1
GAF domain-like	CAD & PB1 domains	1	1
RmlC-like cupins	P-loop containing nucleoside triphosphate hydrolases	1	1
RNI-like	Acyl-CoA N-acyltransferases (Nat)	1	1
DNA-binding domain	Clavaminate synthase-like	1	1
Mitochondrial carrier	HMA, heavy metal-associated domain	1	1
Creatinase/aminopeptidase	NAD(P)-binding Rossmann-fold domains	1	1
Concanavalin A-like lectins/glucanases	Calpain large subunit, middle domain (domain III)	1	1
Inorganic pyrophosphatase	RNA-binding domain, RBD	1	1
TPR-like	ADP-ribosylation	1	1
alpha/beta-Hydrolases	Nucleotidylyl transferase	1	1
Cytochrome b5-like heme/steroid binding domain	PP2C-like	1	1
Actin-like ATPase domain	P-loop containing nucleoside triphosphate hydrolases	1	1
PLC-like phosphodiesterases	beta-beta-alpha zinc fingers	1	1
BAR/IMD domain-like	BAR/IMD domain-like	1	1
RNA-binding domain, RBD	Surp module (SWAP domain)	1	1
Ankyrin repeat	GroEL apical domain-like	1	1
AMMECR1-like	AMMECR1-like	1	1
Expressed protein At2g23090/F21P24.15	Expressed protein At2g23090/F21P24.15	1	1
DNA/RNA polymerases	Ribosomal protein S5 domain 2-like	1	1
F-box domain	ClpP/crotonase	1	1
AlbA-like	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	1	1
PIN domain-like	PIN domain-like	1	1
Cytochrome P450	alpha/beta-Hydrolases	1	1
Nucleotide-diphospho-sugar transferases	Cryptochrome/photolyase FAD-binding domain	1	1
RNA-binding domain, RBD	Saposin	1	1
Alpha subunit of glutamate synthase, C-terminal domain	Nucleotide-binding domain	1	1
PSPTO4464-like	Osmotin, thaumatin-like protein	1	1
Zinc beta-ribbon	Myosin rod fragments	1	1
TRAF domain-like	Ubiquitin-like	1	1
Acid proteases	HAD-like	1	1
POZ domain	Galactose-binding domain-like	1	1
FMN-linked oxidoreductases	FMN-linked oxidoreductases	1	1
Amidase signature (AS) enzymes	Amidase signature (AS) enzymes	1	1
FAD-linked oxidoreductase	SNARE-like	1	1
Cysteine-rich domain	RING/U-box	1	1
HisI-like	all-alpha NTP pyrophosphatases	1	1
Acid proteases	UBA-like	1	1
Actin-like ATPase domain	HD-domain/PDEase-like	1	1
Acetyl-CoA synthetase-like	L domain-like	1	1
Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment	Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment	1	1
Homeodomain-like	Mannose 6-phosphate receptor domain	1	1
FAS1 domain	Formin homology 2 domain (FH2 domain)	1	1
POZ domain	L domain-like	1	1
RuBisCo LSMT C-terminal, substrate-binding domain	RNA-binding domain, RBD	1	1
Double Clp-N motif	Chaperone J-domain	1	1
NAD-binding domain of HMG-CoA reductase	NAD-binding domain of HMG-CoA reductase	1	1
beta and beta-prime subunits of DNA dependent RNA-polymerase	Creatinase/aminopeptidase	1	1
MFS general substrate transporter	Cysteine proteinases	1	1
Concanavalin A-like lectins/glucanases	Cysteine proteinases	1	1
Periplasmic binding protein-like II	GlnB-like	1	1
R3H domain	Ankyrin repeat	1	1
Cryptochrome/photolyase FAD-binding domain	Cryptochrome/photolyase FAD-binding domain	1	1
vWA-like	Homeodomain-like	1	1
beta-sandwich domain of Sec23/24	Phospholipase D/nuclease	1	1
Glucocorticoid receptor-like (DNA-binding domain)	WRKY DNA-binding domain	1	1
Epsilon subunit of mitochondrial F1F0-ATP synthase	DNA/RNA polymerases	1	1
Nucleic acid-binding proteins	Mog1p/PsbP-like	1	1
RNA-binding domain, RBD	DNA-binding pseudobarrel domain	1	1
Growth factor receptor domain	Growth factor receptor domain	1	1
DNA ligase/mRNA capping enzyme, catalytic domain	DNA ligase/mRNA capping enzyme, catalytic domain	1	1
UDP-Glycosyltransferase/glycogen phosphorylase	Rhodanese/Cell cycle control phosphatase	1	1
UBC-like	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	1	1
RNI-like	Retrovirus zinc finger-like domains	1	1
Eukaryotic type KH-domain (KH-domain type I)	NAC domain	1	1
Nucleotide-diphospho-sugar transferases	ARM repeat	1	1
PLP-binding barrel	Dihydrofolate reductase-like	1	1
Enolase C-terminal domain-like	alpha/beta-Hydrolases	1	1
Calponin-homology domain, CH-domain	ARM repeat	1	1
HSP20-like chaperones	beta-beta-alpha zinc fingers	1	1
ARM repeat	Chlorophyll a-b binding protein	1	1
NAD(P)-binding Rossmann-fold domains	Heat shock protein 70kD (HSP70), peptide-binding domain	1	1
DNA/RNA polymerases	RING/U-box	1	1
Plant invertase/pectin methylesterase inhibitor	RNA-binding domain, RBD	1	1
DNA-binding pseudobarrel domain	HLH, helix-loop-helix DNA-binding domain	1	1
Fe-S cluster assembly (FSCA) domain-like	PLP-dependent transferases	1	1
S-adenosyl-L-methionine-dependent methyltransferases	Clc chloride channel	1	1
Acyl-CoA dehydrogenase C-terminal domain-like	Thioredoxin-like	1	1
YVTN repeat-like/Quinoprotein amine dehydrogenase	YVTN repeat-like/Quinoprotein amine dehydrogenase	1	1
CAD & PB1 domains	Pectin lyase-like	1	1
PLC-like phosphodiesterases	Thiamin diphosphate-binding fold (THDP-binding)	1	1
Ankyrin repeat	GroEL-intermediate domain like	1	1
PLP-dependent transferases	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	1	1
HMA, heavy metal-associated domain	Cu,Zn superoxide dismutase-like	1	1
SNARE-like	PH domain-like	1	1
Heme oxygenase-like	P-loop containing nucleoside triphosphate hydrolases	1	1
Protein kinase-like (PK-like)	Cyclin-like	1	1
Glutathione synthetase ATP-binding domain-like	Pectin lyase-like	1	1
C-terminal domain of adenylylcyclase associated protein	(Trans)glycosidases	1	1
AlbA-like	TPR-like	1	1
LexA/Signal peptidase	P-loop containing nucleoside triphosphate hydrolases	1	1
C-type lectin-like	Protein kinase-like (PK-like)	1	1
ACP-like	Heme-dependent catalase-like	1	1
Substrate-binding domain of HMG-CoA reductase	Substrate-binding domain of HMG-CoA reductase	1	1
Ammonium transporter	Ribonuclease H-like	1	1
PreATP-grasp domain	Ribosomal L11/L12e N-terminal domain	1	1
Carbon-nitrogen hydrolase	NAC domain	1	1
Protein kinase-like (PK-like)	Nucleic acid-binding proteins	1	1
MFS general substrate transporter	L domain-like	1	1
SNARE-like	WD40 repeat-like	1	1
Glycosyl hydrolase domain	P-loop containing nucleoside triphosphate hydrolases	1	1
Hypothetical protein PA1324	Carboxypeptidase regulatory domain-like	1	1
Taf5 N-terminal domain-like	WD40 repeat-like	1	1
TPR-like	Metallo-dependent phosphatases	1	1
GST C-terminal domain-like	P-loop containing nucleoside triphosphate hydrolases	1	1
CI-2 family of serine protease inhibitors	CI-2 family of serine protease inhibitors	1	1
post-AAA+ oligomerization domain-like	PLP-dependent transferases	1	1
Glutathione synthetase ATP-binding domain-like	Methylglyoxal synthase-like	1	1
Flavoproteins	Flavoproteins	1	1
Stabilizer of iron transporter SufD	Stabilizer of iron transporter SufD	1	1
LeuD/IlvD-like	EF-hand	1	1
DNA/RNA polymerases	S-adenosyl-L-methionine-dependent methyltransferases	1	1
PAP/OAS1 substrate-binding domain	Protein kinase-like (PK-like)	1	1
Trypsin-like serine proteases	TPR-like	1	1
UDP-Glycosyltransferase/glycogen phosphorylase	Acid proteases	1	1
vWA-like	Formin homology 2 domain (FH2 domain)	1	1
GroEL-intermediate domain like	Galactose mutarotase-like	1	1
Dom34/Pelota N-terminal domain-like	Dom34/Pelota N-terminal domain-like	1	1
Hypothetical protein c14orf129, hspc210	TPR-like	1	1
E set domains	FAD-linked reductases, C-terminal domain	1	1
Rhomboid-like	UBA-like	1	1
CRAL/TRIO N-terminal domain	SNARE-like	1	1
Subtilisin-like	SpoIIaa-like	1	1
BRCT domain	post-AAA+ oligomerization domain-like	1	1
GroEL equatorial domain-like	Cysteine proteinases	1	1
TRAF domain-like	Protein kinase-like (PK-like)	1	1
CAD & PB1 domains	ssDNA-binding transcriptional regulator domain	1	1
Histone-fold	Homeodomain-like	1	1
Aquaporin-like	Aquaporin-like	1	1
Terpenoid synthases	Cytochrome P450	1	1
Trypsin-like serine proteases	P-loop containing nucleoside triphosphate hydrolases	1	1
RNA-binding domain, RBD	PWI domain	1	1
Cyclophilin-like	Ribonuclease PH domain 2-like	1	1
SAM/Pointed domain	RING/U-box	1	1
WD40 repeat-like	Isocitrate/Isopropylmalate dehydrogenase-like	1	1
beta-Galactosidase/glucuronidase domain	Galactose mutarotase-like	1	1
Calcium ATPase, transduction domain A	Histone-fold	1	1
NAD(P)-binding Rossmann-fold domains	PK C-terminal domain-like	1	1
Urease, beta-subunit	Metallo-dependent hydrolases	1	1
TGS-like	Class II aaRS ABD-related	1	1
Glucocorticoid receptor-like (DNA-binding domain)	Homeodomain-like	1	1
Voltage-gated potassium channels	Ubiquitin-like	1	1
P-loop containing nucleoside triphosphate hydrolases	beta-beta-alpha zinc fingers	1	1
FAD-binding/transporter-associated domain-like	NAC domain	1	1
Hypothetical protein PA1324	Cna protein B-type domain	1	1
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain	Nucleotidylyl transferase	1	1
Leucine zipper domain	"Winged helix" DNA-binding domain	1	1
P-loop containing nucleoside triphosphate hydrolases	ARID-like	1	1
Sm-like ribonucleoproteins	Ribosomal protein S3 C-terminal domain	1	1
ClpS-like	Leucine zipper domain	1	1
2Fe-2S ferredoxin-like	CO dehydrogenase flavoprotein C-terminal domain-like	1	1
alpha/beta-Hydrolases	Ribonuclease H-like	1	1
PP2C-like	cAMP-binding domain-like	1	1
NAD(P)-binding Rossmann-fold domains	PAP/OAS1 substrate-binding domain	1	1
P-loop containing nucleoside triphosphate hydrolases	UBC-like	1	1
P-loop containing nucleoside triphosphate hydrolases	Nop domain	1	1
Formate/glycerate dehydrogenase catalytic domain-like	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	1	1
DNA-binding domain	UDP-Glycosyltransferase/glycogen phosphorylase	1	1
(Trans)glycosidases	S-adenosyl-L-methionine-dependent methyltransferases	1	1
Heat shock protein 70kD (HSP70), peptide-binding domain	AF0104/ALDC/Ptd012-like	1	1
PLP-dependent transferases	beta-beta-alpha zinc fingers	1	1
WD40 repeat-like	SNARE fusion complex	1	1
Myosin rod fragments	Myosin rod fragments	1	1
NAD(P)-binding Rossmann-fold domains	RplX-like	1	1
DNA ligase/mRNA capping enzyme, catalytic domain	BRCT domain	1	1
Actin-like ATPase domain	Glucocorticoid receptor-like (DNA-binding domain)	1	1
DPP6 N-terminal domain-like	Ubiquitin-like	1	1
Eukaryotic type KH-domain (KH-domain type I)	Retrovirus zinc finger-like domains	1	1
Ribokinase-like	Thiamin phosphate synthase	1	1
Ribonuclease PH domain 2-like	DNA/RNA polymerases	1	1
HMA, heavy metal-associated domain	Histone-fold	1	1
Galactose mutarotase-like	SGNH hydrolase	1	1
Metallo-dependent phosphatases	DNase I-like	1	1
HMA, heavy metal-associated domain	Glycerol-3-phosphate (1)-acyltransferase	1	1
GAD domain-like	Mog1p/PsbP-like	1	1
Homeodomain-like	Acid proteases	1	1
Protein kinase-like (PK-like)	GroEL-intermediate domain like	1	1
Beta-D-glucan exohydrolase, C-terminal domain	CRAL/TRIO domain	1	1
Acetyl-CoA synthetase-like	ACP-like	1	1
Metal cation-transporting ATPase, ATP-binding domain N	(Trans)glycosidases	1	1
Fumarylacetoacetate hydrolase, FAH, N-terminal domain	FAH	1	1
Plant invertase/pectin methylesterase inhibitor	Plant invertase/pectin methylesterase inhibitor	1	1
Glucocorticoid receptor-like (DNA-binding domain)	Cytochrome P450	1	1
HMA, heavy metal-associated domain	Six-hairpin glycosidases	1	1
Tricorn protease domain 2	Zn-binding ribosomal proteins	1	1
Clavaminate synthase-like	Chaperone J-domain	1	1
Cytochrome P450	Thiamin diphosphate-binding fold (THDP-binding)	1	1
Leucine zipper domain	Thioredoxin-like	1	1
Ribosome recycling factor, RRF	S-adenosyl-L-methionine-dependent methyltransferases	1	1
RNA-binding domain, RBD	Mss4-like	1	1
ARM repeat	FAD-binding/transporter-associated domain-like	1	1
Ammonium transporter	Retrovirus zinc finger-like domains	1	1
Tetrahydrobiopterin biosynthesis enzymes-like	NAD(P)-binding Rossmann-fold domains	1	1
MoeA N-terminal region -like	Molybdenum cofactor biosynthesis proteins	1	1
FAD/NAD(P)-binding domain	SMAD/FHA domain	1	1
Bromodomain	Bromodomain	1	1
6-phosphogluconate dehydrogenase C-terminal domain-like	Aldolase	1	1
Terpenoid synthases	DNA/RNA polymerases	1	1
Clavaminate synthase-like	Acid proteases	1	1
PurS-like	FGAM synthase PurL, linker domain	1	1
Translation proteins SH3-like domain	Ribosomal protein L16p/L10e	1	1
Tricorn protease N-terminal domain	alpha/beta-Hydrolases	1	1
DNA-binding domain	Ran binding protein zinc finger-like	1	1
Rudiment single hybrid motif	ClpP/crotonase	1	1
Glucocorticoid receptor-like (DNA-binding domain)	DNA clamp	1	1
Ran binding protein zinc finger-like	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain	1	1
(Trans)glycosidases	CRAL/TRIO N-terminal domain	1	1
DTD-like	DTD-like	1	1
FAD-linked oxidoreductase	P-loop containing nucleoside triphosphate hydrolases	1	1
Beta-D-glucan exohydrolase, C-terminal domain	S-adenosyl-L-methionine-dependent methyltransferases	1	1
PYP-like sensor domain (PAS domain)	Galactose oxidase, central domain	1	1
Activator of Hsp90 ATPase, Aha1	Bet v1-like	1	1
LDL receptor-like module	PK C-terminal domain-like	1	1
C2 domain (Calcium/lipid-binding domain, CaLB)	vWA-like	1	1
ARID-like	Clavaminate synthase-like	1	1
Quinoprotein alcohol dehydrogenase-like	S-adenosyl-L-methionine-dependent methyltransferases	1	1
FYVE/PHD zinc finger	ENTH/VHS domain	1	1
Homeodomain-like	Clathrin adaptor appendage domain	1	1
all-alpha NTP pyrophosphatases	all-alpha NTP pyrophosphatases	1	1
Glucocorticoid receptor-like (DNA-binding domain)	ADP-ribosylation	1	1
HLH, helix-loop-helix DNA-binding domain	Tudor/PWWP/MBT	1	1
P-loop containing nucleoside triphosphate hydrolases	NagB/RpiA/CoA transferase-like	1	1
Amine oxidase catalytic domain	TK C-terminal domain-like	1	1
Cysteine proteinases	HLH, helix-loop-helix DNA-binding domain	1	1
ARM repeat	Zn-binding ribosomal proteins	1	1
Fe-S cluster assembly (FSCA) domain-like	P-loop containing nucleoside triphosphate hydrolases	1	1
F-box domain	NHL repeat	1	1
Trimeric LpxA-like enzymes	Heme-dependent catalase-like	1	1
tRNA-guanine transglycosylase	tRNA-guanine transglycosylase	1	1
CRAL/TRIO N-terminal domain	UBC-like	1	1
Kelch motif	S-adenosyl-L-methionine-dependent methyltransferases	1	1
Protein kinase-like (PK-like)	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain	1	1
Enolase C-terminal domain-like	Enolase C-terminal domain-like	1	1
Calponin-homology domain, CH-domain	DNase I-like	1	1
Concanavalin A-like lectins/glucanases	SH2 domain	1	1
RNA-binding domain, RBD	Calcium ATPase, transmembrane domain M	1	1
TPR-like	(Trans)glycosidases	1	1
Protein prenylyltransferase	L domain-like	1	1
cAMP-binding domain-like	ADP-ribosylation	1	1
Composite domain of metallo-dependent hydrolases	Protein kinase-like (PK-like)	1	1
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	Phosphoglycerate mutase-like	1	1
Calpain large subunit, middle domain (domain III)	FYVE/PHD zinc finger	1	1
beta-sandwich domain of Sec23/24	ARM repeat	1	1
Protein kinase-like (PK-like)	DNase I-like	1	1
HIT/MYND zinc finger-like	SET domain	1	1
Aquaporin-like	Nucleotidyltransferase	1	1
Nucleic acid-binding proteins	Acid phosphatase/Vanadium-dependent haloperoxidase	1	1
Ran binding protein zinc finger-like	Translation proteins	1	1
PP2C-like	MFS general substrate transporter	1	1
Homeodomain-like	Quinoprotein alcohol dehydrogenase-like	1	1
HMA, heavy metal-associated domain	Chlorophyll a-b binding protein	1	1
Thioredoxin-like	NHL repeat	1	1
Molybdenum cofactor biosynthesis protein C, MoaC	EF-hand	1	1
MFS general substrate transporter	FAD-dependent thiol oxidase	1	1
S13-like H2TH domain	Ribosomal protein S5 domain 2-like	1	1
Tropomyosin	PLC-like phosphodiesterases	1	1
Mss4-like	Tubulin nucleotide-binding domain-like	1	1
PRP4-like	Cupredoxins	1	1
Metal cation-transporting ATPase, ATP-binding domain N	Six-hairpin glycosidases	1	1
FAD-binding/transporter-associated domain-like	Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain	1	1
PP2C-like	ClpP/crotonase	1	1
eIF1-like	RING/U-box	1	1
Nucleic acid-binding proteins	Phosphoglycerate mutase-like	1	1
Actin-like ATPase domain	post-AAA+ oligomerization domain-like	1	1
PIN domain-like	NAD(P)-binding Rossmann-fold domains	1	1
P-loop containing nucleoside triphosphate hydrolases	eIF1-like	1	1
Protein kinase-like (PK-like)	FAD/NAD(P)-binding domain	1	1
YbaK/ProRS associated domain	YbaK/ProRS associated domain	1	1
Thiamin diphosphate-binding fold (THDP-binding)	beta-beta-alpha zinc fingers	1	1
vWA-like	SPOC domain-like	1	1
Glutathione synthetase ATP-binding domain-like	Carbamoyl phosphate synthetase, large subunit connection domain	1	1
EF-hand	Ankyrin repeat	1	1
Protein kinase-like (PK-like)	Ran binding protein zinc finger-like	1	1
Chaperone J-domain	Ribonuclease H-like	1	1
Chaperone J-domain	HSC20 (HSCB), C-terminal oligomerisation domain	1	1
EF-hand	Trimeric LpxA-like enzymes	1	1
FAD/NAD(P)-binding domain	Histone-fold	1	1
Tudor/PWWP/MBT	Quinoprotein alcohol dehydrogenase-like	1	1
HSP20-like chaperones	Acid phosphatase/Vanadium-dependent haloperoxidase	1	1
Formin homology 2 domain (FH2 domain)	Tudor/PWWP/MBT	1	1
Riboflavin synthase domain-like	Protein kinase-like (PK-like)	1	1
SRF-like	Clavaminate synthase-like	1	1
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	HD-domain/PDEase-like	1	1
Nucleic acid-binding proteins	WRKY DNA-binding domain	1	1
SIS domain	SIS domain	1	1
Clavaminate synthase-like	RING/U-box	1	1
ArfGap/RecO-like zinc finger	ArfGap/RecO-like zinc finger	1	1
MFS general substrate transporter	RNA-binding domain, RBD	1	1
DNA-binding pseudobarrel domain	Formin homology 2 domain (FH2 domain)	1	1
EF-hand	DNA/RNA polymerases	1	1
ATP12-like	Tubulin nucleotide-binding domain-like	1	1
Actin depolymerizing proteins	TAZ domain	1	1
(Phosphotyrosine protein) phosphatases II	POZ domain	1	1
Glucocorticoid receptor-like (DNA-binding domain)	BRCT domain	1	1
CRAL/TRIO domain	UBC-like	1	1
Aldolase	2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain	1	1
Thioesterase/thiol ester dehydrase-isomerase	Actin-crosslinking proteins	1	1
UBC-like	AF0104/ALDC/Ptd012-like	1	1
NAC domain	Pseudouridine synthase	1	1
Creatinase/aminopeptidase	GroES-like	1	1
FYVE/PHD zinc finger	GYF domain	1	1
Acyl-CoA binding protein	Translation proteins	1	1
UBA-like	Glycosyl hydrolase domain	1	1
Ribosomal protein L29 (L29p)	P-loop containing nucleoside triphosphate hydrolases	1	1
Cytochrome P450	Phosphoglycerate mutase-like	1	1
RING/U-box	HAD-like	1	1
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	F-box domain	1	1
Cystatin/monellin	Tubulin C-terminal domain-like	1	1
Arginase/deacetylase	RING/U-box	1	1
WD40 repeat-like	RL5-like	1	1
Ankyrin repeat	GST C-terminal domain-like	1	1
Creatinase/aminopeptidase	ACT-like	1	1
Ribosomal protein S5 domain 2-like	(Trans)glycosidases	1	1
FAD/NAD(P)-binding domain	HI0933 insert domain-like	1	1
HAD-like	Ribosomal protein S6	1	1
Urease, beta-subunit	Composite domain of metallo-dependent hydrolases	1	1
Glycosyl hydrolase domain	L domain-like	1	1
Osmotin, thaumatin-like protein	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	1	1
2Fe-2S ferredoxin-like	CO dehydrogenase ISP C-domain like	1	1
UDP-Glycosyltransferase/glycogen phosphorylase	"Winged helix" DNA-binding domain	1	1
Thioredoxin-like	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain	1	1
Ribosomal protein S8	Sm-like ribonucleoproteins	1	1
S-adenosyl-L-methionine-dependent methyltransferases	Pectin lyase-like	1	1
RING/U-box	ALDH-like	1	1
Cupredoxins	TRAF domain-like	1	1
Hairpin loop containing domain-like	UDP-Glycosyltransferase/glycogen phosphorylase	1	1
UDP-Glycosyltransferase/glycogen phosphorylase	RING/U-box	1	1
N-utilization substance G protein NusG, N-terminal domain	Translation proteins SH3-like domain	1	1
Beta-D-glucan exohydrolase, C-terminal domain	Beta-D-glucan exohydrolase, C-terminal domain	1	1
TRAF domain-like	ARM repeat	1	1
Cyclophilin-like	Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3	1	1
Acid proteases	AlbA-like	1	1
HCP-like	Cupredoxins	1	1
F-box domain	Pectin lyase-like	1	1
Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)	Heme-dependent peroxidases	1	1
Oxysterol-binding protein-like	Homeodomain-like	1	1
NAD kinase/diacylglycerol kinase-like	alpha/beta-Hydrolases	1	1
6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK	Dihydropteroate synthetase-like	1	1
CHY zinc finger-like	Zinc hairpin stack	1	1
Protein kinase-like (PK-like)	SNARE fusion complex	1	1
Terpenoid cyclases/Protein prenyltransferases	Retrovirus zinc finger-like domains	1	1
POZ domain	DNase I-like	1	1
C2 domain (Calcium/lipid-binding domain, CaLB)	Fe-S cluster assembly (FSCA) domain-like	1	1
alpha/beta-Hydrolases	Ubiquitin-like	1	1
CYTH-like phosphatases	Ribonuclease H-like	1	1
L domain-like	GST C-terminal domain-like	1	1
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	CRAL/TRIO N-terminal domain	1	1
DNA/RNA polymerases	ENTH/VHS domain	1	1
beta-beta-alpha zinc fingers	Homeodomain-like	1	1
TPR-like	UBC-like	1	1
UBC-like	UBA-like	1	1
Myosin rod fragments	RNA-binding domain, RBD	1	1
Formiminotransferase domain of formiminotransferase-cyclodeaminase.	Formiminotransferase domain of formiminotransferase-cyclodeaminase.	1	1
NAD(P)-binding Rossmann-fold domains	Aquaporin-like	1	1
Acid phosphatase/Vanadium-dependent haloperoxidase	beta-beta-alpha zinc fingers	1	1
POZ domain	SRF-like	1	1
RmlC-like cupins	Mob1/phocein	1	1
Ran binding protein zinc finger-like	ENT-like	1	1
Ligand-binding domain in the NO signalling and Golgi transport	FabD/lysophospholipase-like	1	1
SpoIIaa-like	HAD-like	1	1
Lipoxigenase	Lipoxigenase	1	1
Protein kinase-like (PK-like)	Tautomerase/MIF	1	1
Concanavalin A-like lectins/glucanases	SGNH hydrolase	1	1
Pentapeptide repeat-like	Pentapeptide repeat-like	1	1
Ribonuclease H-like	Cyclophilin-like	1	1
Cullin repeat-like	Cullin repeat-like	1	1
MFS general substrate transporter	GroEL apical domain-like	1	1
DNA/RNA polymerases	Subdomain of clathrin and coatomer appendage domain	1	1
Voltage-gated potassium channels	SpoIIaa-like	1	1
ARM repeat	FAD/NAD(P)-binding domain	1	1
MAL13P1.257-like	MAL13P1.257-like	1	1
Aspartate/glutamate racemase	Aspartate/glutamate racemase	1	1
Class II aaRS ABD-related	Homeodomain-like	1	1
Thiolase-like	Ypt/Rab-GAP domain of gyp1p	1	1
AraD/HMP-PK domain-like	AraD/HMP-PK domain-like	1	1
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	PP2C-like	1	1
Protein kinase-like (PK-like)	(Trans)glycosidases	1	1
Dihydrofolate reductase-like	Thymidylate synthase/dCMP hydroxymethylase	1	1
Protein kinase-like (PK-like)	HD-domain/PDEase-like	1	1
E set domains	HCP-like	1	1
L domain-like	Ankyrin repeat	1	1
Acetyl-CoA synthetase-like	UDP-Glycosyltransferase/glycogen phosphorylase	1	1
alpha/beta-Hydrolases	Zinc beta-ribbon	1	1
SRF-like	RING/U-box	1	1
beta-carbonic anhydrase, cab	Endosomal sorting complex assembly domain	1	1
Carbamoyl phosphate synthetase, large subunit connection domain	Methylglyoxal synthase-like	1	1
ATP-dependent DNA ligase DNA-binding domain	Nucleic acid-binding proteins	1	1
Plant invertase/pectin methylesterase inhibitor	Retrovirus zinc finger-like domains	1	1
eIF1-like	Multidrug resistance efflux transporter EmrE	1	1
TPR-like	HIT/MYND zinc finger-like	1	1
Tubulin nucleotide-binding domain-like	Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	1	1
PUA domain-like	Ribosomal proteins L15p and L18e	1	1
ARM repeat	Carbonic anhydrase	1	1
RNA-binding domain, RBD	Purple acid phosphatase, N-terminal domain	1	1
HAD-like	Calcium-dependent phosphotriesterase	1	1
Lysozyme-like	Lysozyme-like	1	1
Homeodomain-like	L domain-like	1	1
MFS general substrate transporter	HSP20-like chaperones	1	1
L domain-like	Tubulin C-terminal domain-like	1	1
Cysteine proteinases	Periplasmic binding protein-like I	1	1
Saposin	WRKY DNA-binding domain	1	1
alpha/beta-Hydrolases	"Winged helix" DNA-binding domain	1	1
Acid proteases	Clathrin heavy-chain terminal domain	1	1
Acetyl-CoA synthetase-like	Protein kinase-like (PK-like)	1	1
FYVE/PHD zinc finger	GAT-like domain	1	1
TPR-like	NAD kinase/diacylglycerol kinase-like	1	1
NAD(P)-linked oxidoreductase	ARM repeat	1	1
Formyltransferase	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	1	1
F-box domain	S-adenosyl-L-methionine-dependent methyltransferases	1	1
N-terminal domain of adenylylcyclase associated protein, CAP	(Trans)glycosidases	1	1
WD40 repeat-like	Cyclophilin-like	1	1
NAC domain	DNA/RNA polymerases	1	1
Oxygen-evolving enhancer protein 3,	Cyclophilin-like	1	1
Ankyrin repeat	HCP-like	1	1
AF0104/ALDC/Ptd012-like	Protein kinase-like (PK-like)	1	1
Acid proteases	Sm-like ribonucleoproteins	1	1
Aquaporin-like	HLH, helix-loop-helix DNA-binding domain	1	1
GHMP Kinase, C-terminal domain	FabD/lysophospholipase-like	1	1
NAD(P)-binding Rossmann-fold domains	Homing endonucleases	1	1
Activating enzymes of the ubiquitin-like proteins	PEBP-like	1	1
GroEL-intermediate domain like	SAICAR synthase-like	1	1
PheT/TilS domain	Class II aaRS and biotin synthetases	1	1
DNA/RNA polymerases	Thioredoxin-like	1	1
Phosphoglycerate kinase	Clavaminate synthase-like	1	1
CAD & PB1 domains	F-box domain	1	1
Ubiquitin-like	Glycosyl hydrolase domain	1	1
YgbK-like	Aldolase	1	1
alpha-D-mannose-specific plant lectins	UDP-Glycosyltransferase/glycogen phosphorylase	1	1
RING/U-box	Ribosomal protein S5 domain 2-like	1	1
WD40 repeat-like	GroEL apical domain-like	1	1
RmlC-like cupins	EF-hand	1	1
BRCT domain	Homeodomain-like	1	1
L-aspartase-like	Bet v1-like	1	1
Calcium ATPase, transduction domain A	Six-hairpin glycosidases	1	1
SRF-like	Cupredoxins	1	1
HSP20-like chaperones	RmlC-like cupins	1	1
Quinoprotein alcohol dehydrogenase-like	Fucose-specific lectin	1	1
Glucocorticoid receptor-like (DNA-binding domain)	DNA-glycosylase	1	1
Thioesterase/thiol ester dehydrase-isomerase	PLC-like phosphodiesterases	1	1
2Fe-2S ferredoxin-like	FAD-binding/transporter-associated domain-like	1	1
Subtilisin-like	P-loop containing nucleoside triphosphate hydrolases	1	1
SPOC domain-like	SAP domain	1	1
Nucleic acid-binding proteins	S-adenosyl-L-methionine-dependent methyltransferases	1	1
PP2C-like	Rhodanese/Cell cycle control phosphatase	1	1
Alanine racemase C-terminal domain-like	Thymidylate synthase/dCMP hydroxymethylase	1	1
Aldolase	Protein kinase-like (PK-like)	1	1
PDZ domain-like	P-loop containing nucleoside triphosphate hydrolases	1	1
Ubiquitin-like	Acid proteases	1	1
alpha/beta knot	alpha/beta knot	1	1
RNI-like	Tubulin C-terminal domain-like	1	1
DnaJ/Hsp40 cysteine-rich domain	HSC20 (HSCB), C-terminal oligomerisation domain	1	1
RNA-binding domain, RBD	Calcium ATPase, transduction domain A	1	1
alpha/beta-Hydrolases	Terpenoid cyclases/Protein prenyltransferases	1	1
BRCA2 helical domain	Nucleic acid-binding proteins	1	1
RNA-binding domain, RBD	HCP-like	1	1
NAD(P)-binding Rossmann-fold domains	Histone-fold	1	1
Leucine zipper domain	GST C-terminal domain-like	1	1
Acetyl-CoA synthetase-like	The spindle assembly checkpoint protein mad2	1	1
Thiamin diphosphate-binding fold (THDP-binding)	Enolase C-terminal domain-like	1	1
Six-hairpin glycosidases	At5g01610-like	1	1
GroEL-intermediate domain like	Mitochondrial carrier	1	1
E set domains	FAD/NAD(P)-binding domain	1	1
Cytochrome P450	Nucleotide-diphospho-sugar transferases	1	1
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	DNA mismatch repair protein MutL	1	1
DNA/RNA polymerases	Clathrin adaptor appendage domain	1	1
Homeodomain-like	ARM repeat	1	1
XPC-binding domain	Preprotein translocase SecY subunit	1	1
Zn-dependent exopeptidases	PH domain-like	1	1
Leucine zipper domain	NAD(P)-binding Rossmann-fold domains	1	1
ISP domain	Chlorophyll a-b binding protein	1	1
Tudor/PWWP/MBT	DNA repair protein MutS, domain II	1	1
C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase	P-loop containing nucleoside triphosphate hydrolases	1	1
alpha/beta-Hydrolases	Glucocorticoid receptor-like (DNA-binding domain)	1	1
Calcium ATPase, transduction domain A	L domain-like	1	1
MoeA N-terminal region -like	MoeA C-terminal domain-like	1	1
N-terminal domain of alpha and beta subunits of F1 ATP synthase	Ypt/Rab-GAP domain of gyp1p	1	1
Pectin lyase-like	Barwin-like endoglucanases	1	1
Adenine nucleotide alpha hydrolases-like	t-snare proteins	1	1
Ypt/Rab-GAP domain of gyp1p	S-adenosylmethionine decarboxylase	1	1
WWE domain	ADP-ribosylation	1	1
Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	ACP-like	1	1
Dihydrofolate reductase-like	YbiA-like	1	1
L30e-like	alpha/beta knot	1	1
Trigger factor ribosome-binding domain	FKBP-like	1	1
PDZ domain-like	Rubredoxin-like	1	1
S-adenosyl-L-methionine-dependent methyltransferases	Nucleotide-diphospho-sugar transferases	1	1
SRF-like	RCC1/BLIP-II	1	1
Riboflavin synthase domain-like	Terpenoid cyclases/Protein prenyltransferases	1	1
PLP-dependent transferases	eEF1-gamma domain	1	1
CAD & PB1 domains	Clavaminate synthase-like	1	1
Ribosomal protein L22	DNA/RNA polymerases	1	1
IlvD/EDD N-terminal domain-like	EF-hand	1	1
Ribonuclease H-like	Preprotein translocase SecY subunit	1	1
Aquaporin-like	RING/U-box	1	1
2Fe-2S ferredoxin-like	Molybdenum cofactor-binding domain	1	1
SAICAR synthase-like	ARID-like	1	1
Putative DNA-binding domain	PheT/TilS domain	1	1
Creatinase/aminopeptidase	RplX-like	1	1
(Trans)glycosidases	Metallo-dependent phosphatases	1	1
Cytochrome P450	WW domain	1	1
Translation initiation factor IF3, N-terminal domain	Translation initiation factor IF3, N-terminal domain	1	1
Ribonuclease PH domain 2-like	Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3	1	1
L domain-like	Ribosomal protein S5 domain 2-like	1	1
Chaperone J-domain	ARM repeat	1	1
ABC transporter transmembrane region	Inorganic pyrophosphatase	1	1
Indigoidine synthase A-like	Indigoidine synthase A-like	1	1
Magnesium transport protein CorA, transmembrane region	DNA/RNA polymerases	1	1
PurM C-terminal domain-like	PurM C-terminal domain-like	1	1
(Phosphotyrosine protein) phosphatases II	E set domains	1	1
FAD-linked oxidoreductase	Domain of the SRP/SRP receptor G-proteins	1	1
Cyclophilin-like	Cyclophilin-like	1	1
PurS-like	PurM N-terminal domain-like	1	1
(Trans)glycosidases	HCP-like	1	1
Metallo-hydrolase/oxidoreductase	DNA ligase/mRNA capping enzyme, catalytic domain	1	1
HAND domain of the nucleosome remodeling ATPase ISWI	Nop domain	1	1
HAD-like	Homeodomain-like	1	1
"Winged helix" DNA-binding domain	Zinc beta-ribbon	1	1
RuvA domain 2-like	RuvA domain 2-like	1	1
MFS general substrate transporter	Mitochondrial carrier	1	1
TRAF domain-like	CAD & PB1 domains	1	1
NAD(P)-binding Rossmann-fold domains	Phosphoenolpyruvate/pyruvate domain	1	1
ClpP/crotonase	Clavaminate synthase-like	1	1
Helical domain of Sec23/24	ARM repeat	1	1
Retrovirus zinc finger-like domains	CoA-dependent acyltransferases	1	1
(Trans)glycosidases	Galactose oxidase, central domain	1	1
Carbon-nitrogen hydrolase	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain	1	1
PH domain-like	HMG-box	1	1
GYF domain	F-box domain	1	1
Acyl-CoA binding protein	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain	1	1
P-loop containing nucleoside triphosphate hydrolases	alpha-D-mannose-specific plant lectins	1	1
UDP-Glycosyltransferase/glycogen phosphorylase	PP2C-like	1	1
CAD & PB1 domains	Mannose-binding lectins	1	1
PP2C-like	RNA-binding domain, RBD	1	1
EF-hand	F-box domain	1	1
Aconitase iron-sulfur domain	ARM repeat	1	1
ArfGap/RecO-like zinc finger	Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor	1	1
Rudiment single hybrid motif	Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor	1	1
Ribosomal protein S5 domain 2-like	CCCH zinc finger	1	1
Obg GTP-binding protein N-terminal domain	Obg GTP-binding protein N-terminal domain	1	1
Double-stranded DNA-binding domain	Ribonuclease H-like	1	1
P-loop containing nucleoside triphosphate hydrolases	PK beta-barrel domain-like	1	1
Bromodomain	Cyclin-like	1	1
NAD(P)-binding Rossmann-fold domains	PP2C-like	1	1
TPR-like	PP2C-like	1	1
Periplasmic binding protein-like I	Ubiquitin-like	1	1
DNA primase core	CRAL/TRIO domain	1	1
DNA/RNA polymerases	Bet v1-like	1	1
F-box domain	AlbA-like	1	1
CYTH-like phosphatases	DNA/RNA polymerases	1	1
L domain-like	SBT domain	1	1
Homeodomain-like	Periplasmic binding protein-like II	1	1
SNARE-like	PRP4-like	1	1
alpha-helical ferredoxin	Nucleotide-binding domain	1	1
Amidase signature (AS) enzymes	Protein kinase-like (PK-like)	1	1
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	1	1
Cytochrome f, large domain	Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor	1	1
Macro domain-like	CRAL/TRIO domain	1	1
PGBD-like	DnaJ/Hsp40 cysteine-rich domain	1	1
HAD-like	Metallo-hydrolase/oxidoreductase	1	1
YVTN repeat-like/Quinoprotein amine dehydrogenase	Calcium-dependent phosphotriesterase	1	1
TPR-like	(Phosphotyrosine protein) phosphatases II	1	1
At5g01610-like	cAMP-binding domain-like	1	1
Actin-like ATPase domain	AF0104/ALDC/Ptd012-like	1	1
YjgF-like	YjgF-like	1	1
C-terminal domain of alpha and beta subunits of F1 ATP synthase	Ypt/Rab-GAP domain of gyp1p	1	1
PYP-like sensor domain (PAS domain)	TPR-like	1	1
AF0104/ALDC/Ptd012-like	Concanavalin A-like lectins/glucanases	1	1
TPR-like	alpha/beta-Hydrolases	1	1
Cupredoxins	beta and beta-prime subunits of DNA dependent RNA-polymerase	1	1
HAD-like	L domain-like	1	1
Ribonuclease H-like	F1F0 ATP synthase subunit C	1	1
Acetyl-CoA synthetase-like	Chaperone J-domain	1	1
Urease, gamma-subunit	Composite domain of metallo-dependent hydrolases	1	1
S-adenosyl-L-methionine-dependent methyltransferases	Homeodomain-like	1	1
alpha/beta-Hydrolases	Acid proteases	1	1
HMA, heavy metal-associated domain	Phosphoglycerate mutase-like	1	1
CBS-domain pair	S-adenosyl-L-methionine-dependent methyltransferases	1	1
ARM repeat	E2F-DP heterodimerization region	1	1
DNA/RNA polymerases	Clathrin heavy-chain terminal domain	1	1
ThrRS/AlaRS common domain	PP2C-like	1	1
P-loop containing nucleoside triphosphate hydrolases	vWA-like	1	1
FAD/NAD(P)-binding domain	ACP-like	1	1
Adenine nucleotide alpha hydrolases-like	YjgF-like	1	1
NAD(P)-binding Rossmann-fold domains	Chromo domain-like	1	1
Translation initiation factor 2 beta, aIF2beta, N-terminal domain	ClpP/crotonase	1	1
NAD(P)-binding Rossmann-fold domains	alpha-D-mannose-specific plant lectins	1	1
PLP-dependent transferases	GST C-terminal domain-like	1	1
Metallo-hydrolase/oxidoreductase	Class I glutamine amidotransferase-like	1	1
Adenine nucleotide alpha hydrolases-like	Thioredoxin-like	1	1
4'-phosphopantetheinyl transferase	4'-phosphopantetheinyl transferase	1	1
NTF2-like	6-phosphogluconate dehydrogenase C-terminal domain-like	1	1
CRAL/TRIO domain	SNARE-like	1	1
Homeodomain-like	Periplasmic binding protein-like I	1	1
Carbamate kinase-like	RING/U-box	1	1
FAD-linked reductases, C-terminal domain	4Fe-4S ferredoxins	1	1
HAD-like	S-adenosyl-L-methionine-dependent methyltransferases	1	1
ClpS-like	SRF-like	1	1
Subtilisin-like	Tubby C-terminal domain-like	1	1
vWA-like	Cysteine-rich domain	1	1
NAD(P)-linked oxidoreductase	HLH, helix-loop-helix DNA-binding domain	1	1
P-loop containing nucleoside triphosphate hydrolases	Cyclophilin-like	1	1
Calcium ATPase, transmembrane domain M	L domain-like	1	1
Ankyrin repeat	WD40 repeat-like	1	1
HMA, heavy metal-associated domain	TrmE connector domain	1	1
GroES-like	RplX-like	1	1
Protein kinase-like (PK-like)	Clathrin adaptor appendage domain	1	1
WD40 repeat-like	GroEL-intermediate domain like	1	1
HMA, heavy metal-associated domain	RCC1/BLIP-II	1	1
Actin-like ATPase domain	(Trans)glycosidases	1	1
RNA-binding domain, RBD	F-box domain	1	1
Multidrug resistance efflux transporter EmrE	Acid proteases	1	1
Ribosomal protein S5 domain 2-like	Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3	1	1
L9 N-domain-like	Ribonuclease H-like	1	1
Rhodanese/Cell cycle control phosphatase	Ricin B-like lectins	1	1
RNI-like	Thioredoxin-like	1	1
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	1	1
UDP-Glycosyltransferase/glycogen phosphorylase	ArfGap/RecO-like zinc finger	1	1
Pectin lyase-like	ssDNA-binding transcriptional regulator domain	1	1
RING/U-box	Prefoldin	1	1
Mitochondrial glycoprotein MAM33-like	Glycerol-3-phosphate (1)-acyltransferase	1	1
Rhomboid-like	Ran binding protein zinc finger-like	1	1
DNA repair protein MutS, domain III	SMR domain-like	1	1
GAF domain-like	(Phosphotyrosine protein) phosphatases II	1	1
Barwin-like endoglucanases	Cdc48 domain 2-like	1	1
Nucleic acid-binding proteins	BRCA2 tower domain	1	1
SRF-like	Leucine zipper domain	1	1
Cyclophilin-like	Ribosomal protein S5 domain 2-like	1	1
Thioredoxin-like	Nqo1C-terminal domain-like	1	1
TPR-like	PH domain-like	1	1
LysM domain	Formin homology 2 domain (FH2 domain)	1	1
Plant invertase/pectin methylesterase inhibitor	P-loop containing nucleoside triphosphate hydrolases	1	1
(Phosphotyrosine protein) phosphatases II	(Phosphotyrosine protein) phosphatases II	1	1
MFS general substrate transporter	Cytochrome c oxidase subunit h	1	1
Galactose-binding domain-like	Ribonuclease H-like	1	1
Pectin lyase-like	Chlorophyll a-b binding protein	1	1
Glycoside hydrolase/deacetylase	Glycoside hydrolase/deacetylase	1	1
RING/U-box	Ribosomal protein L32e	1	1
PLP-binding barrel	Thymidylate synthase/dCMP hydroxymethylase	1	1
Cystatin/monellin	Tubulin nucleotide-binding domain-like	1	1
Calpain large subunit, middle domain (domain III)	RING/U-box	1	1
SRF-like	Thioredoxin-like	1	1
HAD-like	TPR-like	1	1
UDP-Glycosyltransferase/glycogen phosphorylase	Mitochondrial carrier	1	1
Cation efflux protein transmembrane domain-like	Cation efflux protein transmembrane domain-like	1	1
Protein kinase-like (PK-like)	GroEL apical domain-like	1	1
DNA primase core	DNA primase core	1	1
Glucocorticoid receptor-like (DNA-binding domain)	Seven-hairpin glycosidases	1	1
FabD/lysophospholipase-like	TPR-like	1	1
Ribonuclease H-like	C2 domain (Calcium/lipid-binding domain, CaLB)	1	1
RmlC-like cupins	Histone-fold	1	1
FAD/NAD(P)-binding domain	Clavaminate synthase-like	1	1
SBT domain	Protein kinase-like (PK-like)	1	1
WD40 repeat-like	Tricorn protease domain 2	1	1
Concanavalin A-like lectins/glucanases	TAZ domain	1	1
CAD & PB1 domains	RING/U-box	1	1
Ubiquitin-like	Cyclophilin-like	1	1
PDZ domain-like	(Phosphotyrosine protein) phosphatases II	1	1
ATP synthase (F1-ATPase), gamma subunit	Ferredoxin reductase-like, C-terminal NADP-linked domain	1	1
Ran binding protein zinc finger-like	Tudor/PWWP/MBT	1	1
Heme-dependent peroxidases	RL5-like	1	1
Thioredoxin-like	beta-beta-alpha zinc fingers	1	1
Protein kinase-like (PK-like)	Cation efflux protein transmembrane domain-like	1	1
PDZ domain-like	PDZ domain-like	1	1
WD40 repeat-like	YhbY-like	1	1
Pseudouridine synthase	Nucleotide-diphospho-sugar transferases	1	1
Kelch motif	Protein kinase-like (PK-like)	1	1
Pentein	Pentein	1	1
Dom34/Pelota N-terminal domain-like	L30e-like	1	1
BSD domain-like	BSD domain-like	1	1
Ribonuclease H-like	ERO1-like	1	1
Ribonuclease H-like	Single hybrid motif	1	1
Urease, gamma-subunit	Urease, beta-subunit	1	1
Retrovirus zinc finger-like domains	Dimeric alpha+beta barrel	1	1
P-loop containing nucleoside triphosphate hydrolases	CCCH zinc finger	1	1
RmlC-like cupins	TPR-like	1	1
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	CRAL/TRIO domain	1	1
BEACH domain	BEACH domain	1	1
GroEL equatorial domain-like	Mitochondrial carrier	1	1
Cysteine proteinases	Calpain large subunit, middle domain (domain III)	1	1
HCP-like	WD40 repeat-like	1	1
PA domain	Adenine nucleotide alpha hydrolases-like	1	1
Chaperone J-domain	beta-beta-alpha zinc fingers	1	1
RNA-binding domain, RBD	Kelch motif	1	1
CBS-domain pair	FAD-binding/transporter-associated domain-like	1	1
ADP-ribosylation	ADP-ribosylation	1	1
P-loop containing nucleoside triphosphate hydrolases	HCP-like	1	1
Lysozyme-like	Trypsin-like serine proteases	1	1
GHMP Kinase, C-terminal domain	S-adenosyl-L-methionine-dependent methyltransferases	1	1
Barwin-like endoglucanases	RNA-binding domain, RBD	1	1
FtsH protease domain-like	Nucleic acid-binding proteins	1	1
Pseudouridine synthase	Pseudouridine synthase	1	1
Translation proteins SH3-like domain	Translation proteins SH3-like domain	1	1
LysM domain	UBA-like	1	1
FYVE/PHD zinc finger	ARM repeat	1	1
Calcium ATPase, transmembrane domain M	Histone-fold	1	1
RNA-binding domain, RBD	Metal cation-transporting ATPase, ATP-binding domain N	1	1
GAF domain-like	Protein kinase-like (PK-like)	1	1
Nucleotide-diphospho-sugar transferases	PAP/OAS1 substrate-binding domain	1	1
Cyclophilin-like	Ran binding protein zinc finger-like	1	1
DNA/RNA polymerases	Nucleic acid-binding proteins	1	1
TGS-like	S-adenosyl-L-methionine-dependent methyltransferases	1	1
GTPase activation domain, GAP	GTPase activation domain, GAP	1	1
Metallo-dependent phosphatases	Thioredoxin-like	1	1
DNase I-like	Leucine zipper domain	1	1
NAD(P)-binding Rossmann-fold domains	ARM repeat	1	1
Actin depolymerizing proteins	Glucocorticoid receptor-like (DNA-binding domain)	1	1
HMA, heavy metal-associated domain	E set domains	1	1
Peptidase/esterase 'gauge' domain	Peptidase/esterase 'gauge' domain	1	1
Glycoside hydrolase/deacetylase	SGNH hydrolase	1	1
Bactericidal permeability-increasing protein, BPI	Bactericidal permeability-increasing protein, BPI	1	1
Glutathione synthetase ATP-binding domain-like	Ribosomal L11/L12e N-terminal domain	1	1
Macro domain-like	HIT-like	1	1
PIN domain-like	MFS general substrate transporter	1	1
Cysteine-rich domain	Protein kinase-like (PK-like)	1	1
Putative DNA-binding domain	Class II aaRS and biotin synthetases	1	1
RNA-binding domain, RBD	ENTH/VHS domain	1	1
Phosphofructokinase	Phosphofructokinase	1	1
Histone-fold	NAD(P)-linked oxidoreductase	1	1
DPP6 N-terminal domain-like	Protein kinase-like (PK-like)	1	1
Retrovirus zinc finger-like domains	Ribonuclease PH domain 2-like	1	1
Ribose/Galactose isomerase RpiB/AlsB	RmlC-like cupins	1	1
Histone-fold	ARM repeat	1	1
HLH, helix-loop-helix DNA-binding domain	Ribosomal protein S6	1	1
Aconitase iron-sulfur domain	alpha/beta-Hydrolases	1	1
RING/U-box	Zn-dependent exopeptidases	1	1
Starch-binding domain-like	Glutathione synthetase ATP-binding domain-like	1	1
Aquaporin-like	PAP/OAS1 substrate-binding domain	1	1
P-loop containing nucleoside triphosphate hydrolases	SMR domain-like	1	1
Arginase/deacetylase	PLP-dependent transferases	1	1
Helical scaffold and wing domains of SecA	Retrovirus zinc finger-like domains	1	1
Cyclin-like	Clavaminate synthase-like	1	1
ARM repeat	ClpP/crotonase	1	1
BRCA2 helical domain	BRCA2 tower domain	1	1
PLP-dependent transferases	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain	1	1
FAD/NAD(P)-binding domain	Heme-dependent catalase-like	1	1
RNA-binding domain, RBD	L domain-like	1	1
Retrovirus zinc finger-like domains	Cysteine proteinases	1	1
5' to 3' exonuclease, C-terminal subdomain	Chromo domain-like	1	1
Cyclophilin-like	Nucleic acid-binding proteins	1	1
Formyltransferase	NAD(P)-binding Rossmann-fold domains	1	1
SAP domain	WGR domain-like	1	1
LDL receptor-like module	PK beta-barrel domain-like	1	1
POZ domain	Quinoprotein alcohol dehydrogenase-like	1	1
PLP-dependent transferases	HLH, helix-loop-helix DNA-binding domain	1	1
FMN-linked oxidoreductases	Nucleotide-binding domain	1	1
HAD-like	Zn-binding ribosomal proteins	1	1
GST C-terminal domain-like	Nucleotidylyl transferase	1	1
UDP-Glycosyltransferase/glycogen phosphorylase	Tryptophan synthase beta subunit-like PLP-dependent enzymes	1	1
Zn-binding ribosomal proteins	Zn-binding ribosomal proteins	1	1
Cullin repeat-like	Prefoldin	1	1
Acyl-CoA N-acyltransferases (Nat)	P-loop containing nucleoside triphosphate hydrolases	1	1
F1F0 ATP synthase subunit C	P-loop containing nucleoside triphosphate hydrolases	1	1
Protein kinase-like (PK-like)	Subdomain of clathrin and coatomer appendage domain	1	1
Histone-fold	Protein kinase-like (PK-like)	1	1
Activator of Hsp90 ATPase, Aha1	Homeodomain-like	1	1
Ferredoxin reductase-like, C-terminal NADP-linked domain	MFS general substrate transporter	1	1
ARM repeat	Ribosomal protein L19 (L19e)	1	1
Subtilisin-like	Phospholipase D/nuclease	1	1
Protein kinase-like (PK-like)	Cysteine proteinases	1	1
Concanavalin A-like lectins/glucanases	Leucine zipper domain	1	1
"Winged helix" DNA-binding domain	ACT-like	1	1
Sm-like ribonucleoproteins	Prokaryotic type KH domain (KH-domain type II)	1	1
Nucleotide-diphospho-sugar transferases	Mitochondrial carrier	1	1
beta and beta-prime subunits of DNA dependent RNA-polymerase	NAD(P)-binding Rossmann-fold domains	1	1
Phospholipase D/nuclease	DNA-glycosylase	1	1
Metallo-hydrolase/oxidoreductase	GMP synthetase C-terminal dimerisation domain	1	1
Ribosomal protein S10	FAD-binding/transporter-associated domain-like	1	1
Phosphoenolpyruvate/pyruvate domain	PP2C-like	1	1
P-loop containing nucleoside triphosphate hydrolases	Citrate synthase	1	1
Trigger factor ribosome-binding domain	Triger factor/SurA peptide-binding domain-like	1	1
POZ domain	Ribosomal protein S8	1	1
ACT-like	Formyltransferase	1	1
SMAD/FHA domain	PP2C-like	1	1
RNI-like	Zn-binding ribosomal proteins	1	1
Calponin-homology domain, CH-domain	FYVE/PHD zinc finger	1	1
ARM repeat	HLH, helix-loop-helix DNA-binding domain	1	1
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain	Sm-like ribonucleoproteins	1	1
14-3-3 protein	L domain-like	1	1
vWA-like	C-terminal domain of Ku80	1	1
Ubiquitin-like	tRNA-intron endonuclease catalytic domain-like	1	1
Indolic compounds 2,3-dioxygenase-like	Mitochondrial carrier	1	1
Cupredoxins	Actin-like ATPase domain	1	1
L-aspartase-like	Class II aaRS ABD-related	1	1
Ribonuclease PH domain 2-like	Eukaryotic type KH-domain (KH-domain type I)	1	1
DNA/RNA polymerases	Sm-like ribonucleoproteins	1	1
Plant invertase/pectin methylesterase inhibitor	Chlorophyll a-b binding protein	1	1
(Phosphotyrosine protein) phosphatases II	TAZ domain	1	1
Subtilisin-like	Ubiquitin-like	1	1
POZ domain	WD40 repeat-like	1	1
Carbon-nitrogen hydrolase	Heme-dependent peroxidases	1	1
HAD-like	Eukaryotic type KH-domain (KH-domain type I)	1	1
Protein kinase-like (PK-like)	FKBP-like	1	1
Formin homology 2 domain (FH2 domain)	Acylphosphatase/BLUF domain-like	1	1
P-loop containing nucleoside triphosphate hydrolases	Translin	1	1
Lipoxigenase	EF-hand	1	1
Bromodomain	DNA/RNA polymerases	1	1
Coproporphyrinogen III oxidase	Ubiquitin-like	1	1
PYP-like sensor domain (PAS domain)	Glycerol-3-phosphate (1)-acyltransferase	1	1
AlbA-like	Osmotin, thaumatin-like protein	1	1
Barwin-like endoglucanases	P-loop containing nucleoside triphosphate hydrolases	1	1
UBA-like	(Trans)glycosidases	1	1
EPT/RTPC-like	Mog1p/PsbP-like	1	1
BRCT domain	DNA/RNA polymerases	1	1
Tudor/PWWP/MBT	P-loop containing nucleoside triphosphate hydrolases	1	1
Double Clp-N motif	Cation efflux protein transmembrane domain-like	1	1
DNA/RNA polymerases	Adenine nucleotide alpha hydrolases-like	1	1
Creatinase/aminopeptidase	Creatinase/aminopeptidase	1	1
L domain-like	FYVE/PHD zinc finger	1	1
Aldolase	Clavaminate synthase-like	1	1
Ankyrin repeat	S-adenosyl-L-methionine-dependent methyltransferases	1	1
Galactose mutarotase-like	DNA-binding domain	1	1
Aquaporin-like	DNA/RNA polymerases	1	1
Sm-like ribonucleoproteins	Sm-like ribonucleoproteins	1	1
SAP domain	ADP-ribosylation	1	1
Formyltransferase	Retrovirus zinc finger-like domains	1	1
Surp module (SWAP domain)	eIF1-like	1	1
PH domain-like	PH domain-like	1	1
Mog1p/PsbP-like	DNA/RNA polymerases	1	1
Cupredoxins	LigB-like	1	1
Carbonic anhydrase	DNA/RNA polymerases	1	1
Succinyl-CoA synthetase domains	P-loop containing nucleoside triphosphate hydrolases	1	1
Mog1p/PsbP-like	Mog1p/PsbP-like	1	1
GHMP Kinase, C-terminal domain	E set domains	1	1
GHMP Kinase, C-terminal domain	Glycosyl hydrolase domain	1	1
Homeodomain-like	Subdomain of clathrin and coatomer appendage domain	1	1
PP2C-like	beta-beta-alpha zinc fingers	1	1
Protein kinase-like (PK-like)	Chromo domain-like	1	1
Thioredoxin-like	Nqo1 middle domain-like	1	1
Flavoproteins	Radical SAM enzymes	1	1
NTF2-like	Protein kinase-like (PK-like)	1	1
PIN domain-like	ARM repeat	1	1
PP2C-like	Phosphohistidine domain	1	1
TAZ domain	(Trans)glycosidases	1	1
FAD-linked oxidases, C-terminal domain	RNA-binding domain, RBD	1	1
Translation proteins SH3-like domain	Ribosomal protein S3 C-terminal domain	1	1
TPR-like	GST C-terminal domain-like	1	1
Rhodanese/Cell cycle control phosphatase	Rhodanese/Cell cycle control phosphatase	1	1
Aminoacid dehydrogenase-like, N-terminal domain	DNA/RNA polymerases	1	1
SNARE fusion complex	DNase I-like	1	1
UDP-Glycosyltransferase/glycogen phosphorylase	ClpP/crotonase	1	1
vWA-like	Protein kinase-like (PK-like)	1	1
TPR-like	LEA14-like	1	1
Ribosomal proteins S24e, L23 and L15e	DnaJ/Hsp40 cysteine-rich domain	1	1
Ribosomal proteins S24e, L23 and L15e	HSP40/DnaJ peptide-binding domain	1	1
Heat shock protein 70kD (HSP70), peptide-binding domain	Heat shock protein 70kD (HSP70), peptide-binding domain	1	1
Tudor/PWWP/MBT	DNA repair protein MutS, domain III	1	1
DNA-binding domain	Histone-fold	1	1
Nucleotidyltransferase	EF-hand	1	1
P-loop containing nucleoside triphosphate hydrolases	Macro domain-like	1	1
Chromo domain-like	Acyl-CoA N-acyltransferases (Nat)	1	1
Formin homology 2 domain (FH2 domain)	Formin homology 2 domain (FH2 domain)	1	1
Acyl-CoA binding protein	Ran binding protein zinc finger-like	1	1
L30e-like	Acid proteases	1	1
Multidrug resistance efflux transporter EmrE	Acetyl-CoA synthetase-like	1	1
Histone-fold	RNA-binding domain, RBD	1	1
UDP-Glycosyltransferase/glycogen phosphorylase	MurD-like peptide ligases, catalytic domain	1	1
RING/U-box	Riboflavin kinase-like	1	1
SH3-domain	Cytochrome P450	1	1
Phospholipase D/nuclease	Acid proteases	1	1
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	Nucleotidyltransferase	1	1
Obg GTP-binding protein N-terminal domain	Obg GTP-binding protein C-terminal domain	1	1
FKBP-like	S-adenosyl-L-methionine-dependent methyltransferases	1	1
AF0104/ALDC/Ptd012-like	Mannose-binding lectins	1	1
CBS-domain pair	Protein kinase-like (PK-like)	1	1
GroEL apical domain-like	Galactose mutarotase-like	1	1
Ferredoxin reductase-like, C-terminal NADP-linked domain	Ferredoxin reductase-like, C-terminal NADP-linked domain	1	1
Barwin-like endoglucanases	Protein kinase-like (PK-like)	1	1
Acyl-CoA N-acyltransferases (Nat)	Terpenoid cyclases/Protein prenyltransferases	1	1
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	RING/U-box	1	1
RNA-binding domain, RBD	HLH, helix-loop-helix DNA-binding domain	1	1
Ribosomal protein S3 C-terminal domain	Ribosomal protein L16p/L10e	1	1
Protein kinase-like (PK-like)	Acyl-CoA dehydrogenase NM domain-like	1	1
VC0467-like	beta-beta-alpha zinc fingers	1	1
Carbonic anhydrase	Ribonuclease H-like	1	1
ARM repeat	Leucine zipper domain	1	1
Nucleotidylyl transferase	Alpha-L RNA-binding motif	1	1
DNA/RNA polymerases	Kelch motif	1	1
Cysteine-rich domain	NAD kinase/diacylglycerol kinase-like	1	1
UDP-Glycosyltransferase/glycogen phosphorylase	DNA/RNA polymerases	1	1
DEK C-terminal domain	ssDNA-binding transcriptional regulator domain	1	1
Peptide methionine sulfoxide reductase	Peptide methionine sulfoxide reductase	1	1
UDP-Glycosyltransferase/glycogen phosphorylase	Cytochrome P450	1	1
Periplasmic binding protein-like I	Voltage-gated potassium channels	1	1
FYSH domain	beta-beta-alpha zinc fingers	1	1
Protein kinase-like (PK-like)	AlbA-like	1	1
Cdc48 domain 2-like	Cdc48 domain 2-like	1	1
MCP/YpsA-like	MCP/YpsA-like	1	1
Cytochrome P450	TK C-terminal domain-like	1	1
Mitochondrial carrier	Trypsin-like serine proteases	1	1
Glutathione synthetase ATP-binding domain-like	ClpP/crotonase	1	1
Protein kinase-like (PK-like)	Glycosyl hydrolase domain	1	1
BRCT domain	"Winged helix" DNA-binding domain	1	1
Protein kinase-like (PK-like)	Sigma2 domain of RNA polymerase sigma factors	1	1
Growth factor receptor domain	Acyl-CoA N-acyltransferases (Nat)	1	1
FGAM synthase PurL, linker domain	PurM C-terminal domain-like	1	1
Homeodomain-like	Ankyrin repeat	1	1
WD40 repeat-like	HLH, helix-loop-helix DNA-binding domain	1	1
RNI-like	alpha/beta knot	1	1
Acetyl-CoA synthetase-like	Heme-dependent catalase-like	1	1
Leucine zipper domain	TK C-terminal domain-like	1	1
Ubiquitin-like	CAD & PB1 domains	1	1
Arginase/deacetylase	Six-hairpin glycosidases	1	1
Protein kinase-like (PK-like)	Cation efflux protein cytoplasmic domain-like	1	1
WD40 repeat-like	CBS-domain pair	1	1
ARM repeat	SH3-domain	1	1
Chaperone J-domain	Sec63 N-terminal domain-like	1	1
Cytochrome f, large domain	Rudiment single hybrid motif	1	1
Class II aaRS and biotin synthetases	TPR-like	1	1
Protein kinase-like (PK-like)	Nucleotide-diphospho-sugar transferases	1	1
Protein kinase-like (PK-like)	Metallo-hydrolase/oxidoreductase	1	1
Carboxypeptidase regulatory domain-like	Cna protein B-type domain	1	1
Ribonuclease H-like	BolA-like	1	1
RNA-binding domain, RBD	Rhomboid-like	1	1
Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain	Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain	1	1
Enolase N-terminal domain-like	Enolase N-terminal domain-like	1	1
Pectin lyase-like	PHL pollen allergen	1	1
FYVE/PHD zinc finger	Growth factor receptor domain	1	1
Riboflavin synthase domain-like	Terpenoid synthases	1	1
Chaperone J-domain	E set domains	1	1
Ribonuclease H-like	At5g01610-like	1	1
Cupredoxins	Leucine zipper domain	1	1
P-loop containing nucleoside triphosphate hydrolases	PLP-dependent transferases	1	1
Concanavalin A-like lectins/glucanases	RNA-binding domain, RBD	1	1
(Trans)glycosidases	SIS domain	1	1
E set domains	RNA-binding domain, RBD	1	1
NAD kinase/diacylglycerol kinase-like	beta-beta-alpha zinc fingers	1	1
Ribosomal protein L32e	Bet v1-like	1	1
Glycerol-3-phosphate (1)-acyltransferase	EF-hand	1	1
Galactose mutarotase-like	P-loop containing nucleoside triphosphate hydrolases	1	1
ARM repeat	Zn-dependent exopeptidases	1	1
FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)	Protein kinase-like (PK-like)	1	1
Creatinase/aminopeptidase	HLH, helix-loop-helix DNA-binding domain	1	1
Ribonuclease H-like	PH domain-like	1	1
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3	Nucleic acid-binding proteins	1	1
DNA/RNA polymerases	ClpP/crotonase	1	1
Acid proteases	Cupredoxins	1	1
P-loop containing nucleoside triphosphate hydrolases	TRCF domain-like	1	1
UDP-Glycosyltransferase/glycogen phosphorylase	Phosphohistidine domain	1	1
SAP domain	RNA-binding domain, RBD	1	1
Protein kinase-like (PK-like)	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain	1	1
RING/U-box	Calcium-dependent phosphotriesterase	1	1
DNA/RNA polymerases	vWA-like	1	1
SNARE fusion complex	P-loop containing nucleoside triphosphate hydrolases	1	1
Protein kinase-like (PK-like)	Zn-binding ribosomal proteins	1	1
Homeodomain-like	DNase I-like	1	1
PP2C-like	Head domain of nucleotide exchange factor GrpE	1	1
cAMP-binding domain-like	SpoIIaa-like	1	1
PP2C-like	PreATP-grasp domain	1	1
Ribonuclease H-like	Sm-like ribonucleoproteins	1	1
Succinyl-CoA synthetase domains	Succinyl-CoA synthetase domains	1	1
LeuD/IlvD-like	ARM repeat	1	1
ARM repeat	Translation proteins	1	1
Histone-fold	Carbohydrate phosphatase	1	1
Tropomyosin	ISP domain	1	1
RmlC-like cupins	Arginase/deacetylase	1	1
CRAL/TRIO domain	Homeodomain-like	1	1
Molybdenum cofactor biosynthesis proteins	Molybdenum cofactor biosynthesis proteins	1	1
HD-domain/PDEase-like	EF-hand	1	1
Rudiment single hybrid motif	Rudiment single hybrid motif	1	1
C-terminal domain of alpha and beta subunits of F1 ATP synthase	C-terminal domain of alpha and beta subunits of F1 ATP synthase	1	1
Rudiment single hybrid motif	Ribosomal L11/L12e N-terminal domain	1	1
Amine oxidase N-terminal region	TK C-terminal domain-like	1	1
Chaperone J-domain	Homeodomain-like	1	1
HSP20-like chaperones	NAD(P)-binding Rossmann-fold domains	1	1
Molybdenum cofactor biosynthesis proteins	MoeA C-terminal domain-like	1	1
RuBisCO, large subunit, small (N-terminal) domain	RuBisCo, C-terminal domain	1	1
Chromo domain-like	Ankyrin repeat	1	1
LDL receptor-like module	Phosphoenolpyruvate/pyruvate domain	1	1
Metal cation-transporting ATPase, ATP-binding domain N	L domain-like	1	1
BRCT domain	NAD(P)-binding Rossmann-fold domains	1	1
Acyl-CoA N-acyltransferases (Nat)	BRCT domain	1	1
GroEL apical domain-like	ARID-like	1	1
CRAL/TRIO N-terminal domain	Homeodomain-like	1	1
Adenine nucleotide alpha hydrolases-like	DHS-like NAD/FAD-binding domain	1	1
RecA protein, C-terminal domain	AN1-like Zinc finger	1	1
Rhodanese/Cell cycle control phosphatase	Heat shock protein 70kD (HSP70), peptide-binding domain	1	1
Ammonium transporter	Ammonium transporter	1	1
Thiamin pyrophosphokinase, catalytic domain	Thiamin pyrophosphokinase, substrate-binding domain	1	1
alpha/beta-Hydrolases	Terpenoid synthases	1	1
P-loop containing nucleoside triphosphate hydrolases	ArfGap/RecO-like zinc finger	1	1
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	SIS domain	1	1
WD40 repeat-like	SBT domain	1	1
CBS-domain pair	PABC (PABP) domain	1	1
PurM C-terminal domain-like	Class I glutamine amidotransferase-like	1	1
Ran binding protein zinc finger-like	DNase I-like	1	1
DNA-binding pseudobarrel domain	WD40 repeat-like	1	1
UBA-like	CAD & PB1 domains	1	1
SNARE-like	Chaperone J-domain	1	1
Beta-D-glucan exohydrolase, C-terminal domain	SNARE-like	1	1
Chalcone isomerase	Chalcone isomerase	1	1
Bet v1-like	N-terminal nucleophile aminohydrolases (Ntn hydrolases)	1	1
N-terminal domain of adenylylcyclase associated protein, CAP	N-terminal domain of adenylylcyclase associated protein, CAP	1	1
PLP-dependent transferases	Actin-like ATPase domain	1	1
TPR-like	PUA domain-like	1	1
Zinc hairpin stack	RING/U-box	1	1
RNA-binding domain, RBD	Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3	1	1
Protein kinase-like (PK-like)	Sigma3 and sigma4 domains of RNA polymerase sigma factors	1	1
PurS-like	PurM C-terminal domain-like	1	1
Thioredoxin-like	RING/U-box	1	1
Dom34/Pelota N-terminal domain-like	Translational machinery components	1	1
Protein kinase-like (PK-like)	Thioredoxin-like	1	1
Subtilisin-like	C2 domain (Calcium/lipid-binding domain, CaLB)	1	1
Single hybrid motif	ClpP/crotonase	1	1
Tryptophan synthase beta subunit-like PLP-dependent enzymes	P-loop containing nucleoside triphosphate hydrolases	1	1
WRKY DNA-binding domain	RNA-binding domain, RBD	1	1
DNA-binding domain	S-adenosyl-L-methionine-dependent methyltransferases	1	1
Acid phosphatase/Vanadium-dependent haloperoxidase	alpha/beta-Hydrolases	1	1
R3H domain	P-loop containing nucleoside triphosphate hydrolases	1	1
PLP-dependent transferases	L30e-like	1	1
GST C-terminal domain-like	Nucleic acid-binding proteins	1	1
P-loop containing nucleoside triphosphate hydrolases	SAM/Pointed domain	1	1
ACP-like	Trimeric LpxA-like enzymes	1	1
PurM N-terminal domain-like	PurM N-terminal domain-like	1	1
Type II DNA topoisomerase	GyrA/ParC C-terminal domain-like	1	1
HLH, helix-loop-helix DNA-binding domain	L domain-like	1	1
ValRS/IleRS/LeuRS editing domain	ValRS/IleRS/LeuRS editing domain	1	1
GST C-terminal domain-like	Ribosomal protein L25-like	1	1
UBC-like	NAD(P)-binding Rossmann-fold domains	1	1
Ribosomal protein S10	CBS-domain pair	1	1
F-box domain	SMI1/KNR4-like	1	1
SPOC domain-like	C-terminal domain of Ku80	1	1
Ribosomal protein S8	Ribosomal protein S8	1	1
Actin-like ATPase domain	DNA/RNA polymerases	1	1
Six-hairpin glycosidases	DNA-binding domain	1	1
P-loop containing nucleoside triphosphate hydrolases	Phosphoenolpyruvate/pyruvate domain	1	1
Ankyrin repeat	RCC1/BLIP-II	1	1
UBA-like	NSFL1 (p97 ATPase) cofactor p47, SEP domain	1	1
POZ domain	(Trans)glycosidases	1	1
WW domain	CAD & PB1 domains	1	1
2Fe-2S ferredoxin-like	CO dehydrogenase molybdoprotein N-domain-like	1	1
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	Acyl-CoA N-acyltransferases (Nat)	1	1
P-loop containing nucleoside triphosphate hydrolases	Taf5 N-terminal domain-like	1	1
AMPKBI-like	Protein kinase-like (PK-like)	1	1
Cysteine proteinases	Thioredoxin-like	1	1
Lipase/lipooxygenase domain (PLAT/LH2 domain)	YhbY-like	1	1
Ribosomal protein S5 domain 2-like	Glycosyl hydrolase domain	1	1
Protein kinase-like (PK-like)	Rhomboid-like	1	1
Mitochondrial carrier	Phosphoenolpyruvate/pyruvate domain	1	1
NAD(P)-binding Rossmann-fold domains	MFS general substrate transporter	1	1
Protein kinase-like (PK-like)	Cytochrome P450	1	1
SufE/NifU	NadA-like	1	1
Starch-binding domain-like	(Trans)glycosidases	1	1
P-loop containing nucleoside triphosphate hydrolases	CRAL/TRIO domain	1	1
Zn-dependent exopeptidases	Cyclophilin-like	1	1
VHP, Villin headpiece domain	(Trans)glycosidases	1	1
RNI-like	S-adenosyl-L-methionine-dependent methyltransferases	1	1
Radical SAM enzymes	S-adenosyl-L-methionine-dependent methyltransferases	1	1
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor	beta-beta-alpha zinc fingers	1	1
DNA/RNA polymerases	Eukaryotic type KH-domain (KH-domain type I)	1	1
P-loop containing nucleoside triphosphate hydrolases	RL5-like	1	1
Xylose isomerase-like	Protein kinase-like (PK-like)	1	1
TrmE connector domain	P-loop containing nucleoside triphosphate hydrolases	1	1
L domain-like	alpha/beta knot	1	1
Tropomyosin	Bet v1-like	1	1
PRC-barrel domain	Nucleotide-diphospho-sugar transferases	1	1
(Trans)glycosidases	NAC domain	1	1
Nudix	Cation efflux protein transmembrane domain-like	1	1
Histone-fold	Histidine-containing phosphotransfer domain, HPT domain	1	1
HLH, helix-loop-helix DNA-binding domain	NAC domain	1	1
PUA domain-like	SWIB/MDM2 domain	1	1
AlbA-like	SNARE-like	1	1
Ran binding protein zinc finger-like	Glucocorticoid receptor-like (DNA-binding domain)	1	1
WRKY DNA-binding domain	FtsH protease domain-like	1	1
Histone-fold	Ribosomal protein S8	1	1
Nucleic acid-binding proteins	BRCT domain	1	1
SWIB/MDM2 domain	RING/U-box	1	1
UDP-Glycosyltransferase/glycogen phosphorylase	TRAF domain-like	1	1
ARM repeat	Zinc beta-ribbon	1	1
WD40 repeat-like	GroEL equatorial domain-like	1	1
Thiolase-like	RNI-like	1	1
Glucocorticoid receptor-like (DNA-binding domain)	HAD-like	1	1
Carbamate kinase-like	ARM repeat	1	1
Galactose-binding domain-like	Retrovirus zinc finger-like domains	1	1
DNA/RNA polymerases	BolA-like	1	1
PH domain-like	"Winged helix" DNA-binding domain	1	1
Retrovirus zinc finger-like domains	Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3	1	1
GST C-terminal domain-like	HMA, heavy metal-associated domain	1	1
WD40 repeat-like	NAC domain	1	1
Cysteine proteinases	FYVE/PHD zinc finger	1	1
Ferredoxin reductase-like, C-terminal NADP-linked domain	Terpenoid cyclases/Protein prenyltransferases	1	1
S-adenosyl-L-methionine-dependent methyltransferases	ABC transporter transmembrane region	1	1
Galactose mutarotase-like	L domain-like	1	1
RNA-binding domain, RBD	DPP6 N-terminal domain-like	1	1
ARM repeat	TRAP-like	1	1
Concanavalin A-like lectins/glucanases	Homeodomain-like	1	1
P-loop containing nucleoside triphosphate hydrolases	LuxS/MPP-like metallohydrolase	1	1
WD40 repeat-like	NHL repeat	1	1
Clavaminate synthase-like	HSP40/DnaJ peptide-binding domain	1	1
AlbA-like	Nqo1C-terminal domain-like	1	1
Alpha subunit of glutamate synthase, C-terminal domain	Acetyl-CoA synthetase-like	1	1
(Trans)glycosidases	UDP-Glycosyltransferase/glycogen phosphorylase	1	1
RNI-like	Tubulin nucleotide-binding domain-like	1	1
Class II aaRS ABD-related	Bet v1-like	1	1
RING/U-box	DNA-binding domain	1	1
Metallo-hydrolase/oxidoreductase	Adenine nucleotide alpha hydrolases-like	1	1
SAP domain	Kelch motif	1	1
NSFL1 (p97 ATPase) cofactor p47, SEP domain	CAD & PB1 domains	1	1
Cysteine proteinases	Tudor/PWWP/MBT	1	1
TAZ domain	TAZ domain	1	1
Bet v1-like	Protein kinase-like (PK-like)	1	1
RNI-like	FYVE/PHD zinc finger	1	1
ARM repeat	SMAD/FHA domain	1	1
FAD/NAD-linked reductases, dimerisation (C-terminal) domain	Metallo-dependent phosphatases	1	1
F1F0 ATP synthase subunit C	N-terminal domain of alpha and beta subunits of F1 ATP synthase	1	1
Acetyl-CoA synthetase-like	4Fe-4S ferredoxins	1	1
Ribosomal protein S16	Osmotin, thaumatin-like protein	1	1
Thioredoxin-like	FAD-dependent thiol oxidase	1	1
EF-hand	RNI-like	1	1
TK C-terminal domain-like	alpha/beta-Hydrolases	1	1
S-adenosyl-L-methionine-dependent methyltransferases	Multidrug resistance efflux transporter EmrE	1	1
ClpP/crotonase	P-loop containing nucleoside triphosphate hydrolases	1	1
Heme-dependent peroxidases	Nucleotide-diphospho-sugar transferases	1	1
HMA, heavy metal-associated domain	(Trans)glycosidases	1	1
Lipoxigenase	YhbY-like	1	1
MIR domain	MIR domain	1	1
RING/U-box	POZ domain	1	1
Phosphoglycerate mutase-like	DNA/RNA polymerases	1	1
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	Protein kinase-like (PK-like)	1	1
GroEL equatorial domain-like	GroEL equatorial domain-like	1	1
Functional domain of the splicing factor Prp18	Functional domain of the splicing factor Prp18	1	1
Glutathione synthetase ATP-binding domain-like	EF-hand	1	1
POZ domain	Protein kinase-like (PK-like)	1	1
ENTH/VHS domain	Ubiquitin-like	1	1
Ribokinase-like	Nucleic acid-binding proteins	1	1
PreATP-grasp domain	Carbamoyl phosphate synthetase, large subunit connection domain	1	1
FAD-linked reductases, C-terminal domain	FAD-linked reductases, C-terminal domain	1	1
DNA/RNA polymerases	Cyclophilin-like	1	1
Ribosomal protein S5 domain 2-like	F-box domain	1	1
C2 domain (Calcium/lipid-binding domain, CaLB)	PLP-dependent transferases	1	1
LEA14-like	FYVE/PHD zinc finger	1	1
FAD-dependent thiol oxidase	RNA-binding domain, RBD	1	1
Leucine zipper domain	Aldolase	1	1
ARM repeat	FAD/NAD-linked reductases, dimerisation (C-terminal) domain	1	1
RNA-binding domain, RBD	Ribosomal protein S5 domain 2-like	1	1
FYSH domain	Hypothetical protein AF0491, middle domain	1	1
ClpP/crotonase	HLH, helix-loop-helix DNA-binding domain	1	1
Nucleic acid-binding proteins	Ribosomal protein L16p/L10e	1	1
"Winged helix" DNA-binding domain	HRDC-like	1	1
ARM repeat	Tricorn protease domain 2	1	1
Class II aaRS ABD-related	Protein kinase-like (PK-like)	1	1
Rhomboid-like	Annexin	1	1
FAD/NAD(P)-binding domain	4Fe-4S ferredoxins	1	1
HLH, helix-loop-helix DNA-binding domain	HIT/MYND zinc finger-like	1	1
Hypothetical protein AF0491, middle domain	beta-beta-alpha zinc fingers	1	1
E2F-DP heterodimerization region	Retrovirus zinc finger-like domains	1	1
P-loop containing nucleoside triphosphate hydrolases	Thiamin pyrophosphokinase, catalytic domain	1	1
P-loop containing nucleoside triphosphate hydrolases	Thiamin pyrophosphokinase, substrate-binding domain	1	1
UDP-Glycosyltransferase/glycogen phosphorylase	Glutathione synthetase ATP-binding domain-like	1	1
HydA/Nqo6-like	EF-hand	1	1
Homeodomain-like	YVTN repeat-like/Quinoprotein amine dehydrogenase	1	1
Protein kinase-like (PK-like)	Nudix	1	1
NAD(P)-binding Rossmann-fold domains	Mitochondrial glycoprotein MAM33-like	1	1
WD40 repeat-like	Phosphoglycerate mutase-like	1	1
alpha-D-mannose-specific plant lectins	S-adenosyl-L-methionine-dependent methyltransferases	1	1
Domain of the SRP/SRP receptor G-proteins	Signal peptide-binding domain	1	1
Phosphoglycerate kinase	Phosphoglycerate kinase	1	1
Probable bacterial effector-binding domain	Homeodomain-like	1	1
SurE-like	Metallo-hydrolase/oxidoreductase	1	1
DNA/RNA polymerases	Tetrahydrobiopterin biosynthesis enzymes-like	1	1
P-loop containing nucleoside triphosphate hydrolases	Calcium ATPase, transmembrane domain M	1	1
Metallo-hydrolase/oxidoreductase	Nucleic acid-binding proteins	1	1
P-loop containing nucleoside triphosphate hydrolases	Microbial and mitochondrial ADK, insert "zinc finger" domain	1	1
Leucine zipper domain	Ribosomal protein L16p/L10e	1	1
beta-sandwich domain of Sec23/24	GroES-like	1	1
POZ domain	Retrovirus zinc finger-like domains	1	1
L domain-like	Zn-binding ribosomal proteins	1	1
HMA, heavy metal-associated domain	2Fe-2S ferredoxin-like	1	1
Metallo-dependent hydrolases	Six-hairpin glycosidases	1	1
SSo0622-like	S-adenosyl-L-methionine-dependent methyltransferases	1	1
PurS-like	Class I glutamine amidotransferase-like	1	1
WRKY DNA-binding domain	Chalcone isomerase	1	1
Tryptophan synthase beta subunit-like PLP-dependent enzymes	alpha/beta knot	1	1
HLH, helix-loop-helix DNA-binding domain	P-loop containing nucleoside triphosphate hydrolases	1	1
ARM repeat	Quinoprotein alcohol dehydrogenase-like	1	1
RmlC-like cupins	Hypothetical protein YjiA, C-terminal domain	1	1
Class II aaRS and biotin synthetases	GAD domain-like	1	1
Class II aaRS and biotin synthetases	Bet v1-like	1	1
4Fe-4S ferredoxins	Metallo-hydrolase/oxidoreductase	1	1
F-box domain	Clavaminate synthase-like	1	1
AN1-like Zinc finger	AN1-like Zinc finger	1	1
Peptidyl-tRNA hydrolase-like	Peptidyl-tRNA hydrolase-like	1	1
Nucleic acid-binding proteins	GAD domain-like	1	1
Homeodomain-like	Retrovirus zinc finger-like domains	1	1
Purple acid phosphatase, N-terminal domain	Purple acid phosphatase, N-terminal domain	1	1
Aquaporin-like	Ribonuclease H-like	1	1
(Trans)glycosidases	SNARE-like	1	1
P-loop containing nucleoside triphosphate hydrolases	Cation efflux protein transmembrane domain-like	1	1
HAD-like	Ypt/Rab-GAP domain of gyp1p	1	1
Protein kinase-like (PK-like)	UDP-Glycosyltransferase/glycogen phosphorylase	1	1
Sm-like ribonucleoproteins	Protein kinase-like (PK-like)	1	1
RL5-like	L30e-like	1	1
Nucleic acid-binding proteins	TPR-like	1	1
WW domain	EF-hand	1	1
PLP-dependent transferases	F-box domain	1	1
NAD(P)-binding Rossmann-fold domains	Kelch motif	1	1
HAD-like	Histone-fold	1	1
GAT-like domain	SET domain	1	1
FAD-linked oxidoreductase	Actin depolymerizing proteins	1	1
ARM repeat	Cyclophilin-like	1	1
PLC-like phosphodiesterases	BAR/IMD domain-like	1	1
Ribonuclease H-like	WD40 repeat-like	1	1
HMG-box	Zn-dependent exopeptidases	1	1
Glutathione synthetase ATP-binding domain-like	S-adenosylmethionine synthetase	1	1
Succinyl-CoA synthetase domains	S-adenosylmethionine synthetase	1	1
Thioredoxin-like	Translation proteins	1	1
(Phosphotyrosine protein) phosphatases II	DNA ligase/mRNA capping enzyme, catalytic domain	1	1
CAD & PB1 domains	S-adenosyl-L-methionine-dependent methyltransferases	1	1
(Trans)glycosidases	Cyclin-like	1	1
Adenine nucleotide alpha hydrolases-like	Argininosuccinate synthetase, C-terminal domain	1	1
Metalloproteases ("zincins"), catalytic domain	Frizzled cysteine-rich domain	1	1
Bacterial exopeptidase dimerisation domain	Cyclophilin-like	1	1
Leucine zipper domain	Cytochrome P450	1	1
Calponin-homology domain, CH-domain	WD40 repeat-like	1	1
SMAD/FHA domain	Phospholipase D/nuclease	1	1
Protein kinase-like (PK-like)	CCCH zinc finger	1	1
CHY zinc finger-like	RING/U-box	1	1
alpha/beta-Hydrolases	Ankyrin repeat	1	1
L-aspartase-like	L-aspartase-like	1	1
Eukaryotic type KH-domain (KH-domain type I)	beta-beta-alpha zinc fingers	1	1
HSP20-like chaperones	HSP20-like chaperones	1	1
Acid proteases	(Trans)glycosidases	1	1
Lipase/lipooxygenase domain (PLAT/LH2 domain)	EF-hand	1	1
Thiamin diphosphate-binding fold (THDP-binding)	Soluble quinoprotein glucose dehydrogenase	1	1
ACT-like	WD40 repeat-like	1	1
FAD-binding/transporter-associated domain-like	RNA-binding domain, RBD	1	1
AlbA-like	Thioredoxin-like	1	1
2Fe-2S ferredoxin-like	LuxS/MPP-like metallohydrolase	1	1
ARM repeat	PLP-dependent transferases	1	1
Beta-D-glucan exohydrolase, C-terminal domain	CRAL/TRIO N-terminal domain	1	1
WD40 repeat-like	EF-hand	1	1
Nudix	Leucine zipper domain	1	1
HesB-like domain	Protein kinase-like (PK-like)	1	1
WD40 repeat-like	NAD(P)-binding Rossmann-fold domains	1	1
FKBP-like	Rhodanese/Cell cycle control phosphatase	1	1
Nudix	AlbA-like	1	1
Cullin repeat-like	PR-1-like	1	1
(Trans)glycosidases	JAB1/MPN domain	1	1
Actin-like ATPase domain	GroES-like	1	1
Ubiquitin-like	Preprotein translocase SecY subunit	1	1
EGF/Laminin	EGF/Laminin	1	1
FYVE/PHD zinc finger	Plus3-like	1	1
WD40 repeat-like	L35p-like	1	1
Retrovirus zinc finger-like domains	RING/U-box	1	1
vWA-like	HAD-like	1	1
Phosphoglycerate mutase-like	PHP domain-like	1	1
Skp1 dimerisation domain-like	L domain-like	1	1
Thioredoxin-like	Glycosyl hydrolase domain	1	1
UBA-like	post-AAA+ oligomerization domain-like	1	1
RNA-binding domain, RBD	Formin homology 2 domain (FH2 domain)	1	1
6-phosphogluconate dehydrogenase C-terminal domain-like	YgbK-like	1	1
Tryptophan synthase beta subunit-like PLP-dependent enzymes	ACT-like	1	1
E set domains	HIT/MYND zinc finger-like	1	1
Tudor/PWWP/MBT	FYVE/PHD zinc finger	1	1
"Winged helix" DNA-binding domain	Retrovirus zinc finger-like domains	1	1
PUA domain-like	alpha-D-mannose-specific plant lectins	1	1
GroEL equatorial domain-like	Ribonuclease H-like	1	1
Nucleotide-diphospho-sugar transferases	Nucleotidyltransferase	1	1
UDP-Glycosyltransferase/glycogen phosphorylase	JAB1/MPN domain	1	1
Phosphoenolpyruvate/pyruvate domain	UDP-Glycosyltransferase/glycogen phosphorylase	1	1
Calcium ATPase, transmembrane domain M	Calcium ATPase, transmembrane domain M	1	1
L-aspartase-like	Homeodomain-like	1	1
L30e-like	L30e-like	1	1
Clavaminate synthase-like	Pectin lyase-like	1	1
LDH C-terminal domain-like	LDH C-terminal domain-like	1	1
SIS domain	WD40 repeat-like	1	1
WW domain	TPR-like	1	1
Amine oxidase catalytic domain	Thiamin diphosphate-binding fold (THDP-binding)	1	1
Thiamin diphosphate-binding fold (THDP-binding)	Enolase N-terminal domain-like	1	1
F-box domain	FAD-linked reductases, C-terminal domain	1	1
YrdC/RibB	YrdC/RibB	1	1
Activating enzymes of the ubiquitin-like proteins	Rhodanese/Cell cycle control phosphatase	1	1
WW domain	P-loop containing nucleoside triphosphate hydrolases	1	1
Starch-binding domain-like	Starch-binding domain-like	1	1
HIT-like	HIT-like	1	1
HSP40/DnaJ peptide-binding domain	Chalcone isomerase	1	1
Surp module (SWAP domain)	ENTH/VHS domain	1	1
Acyl-CoA N-acyltransferases (Nat)	Bromodomain	1	1
Thioredoxin-like	Clavaminate synthase-like	1	1
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	Mss4-like	1	1
AF0104/ALDC/Ptd012-like	Ribosomal protein S10	1	1
Epsilon subunit of mitochondrial F1F0-ATP synthase	Acid proteases	1	1
Class I glutamine amidotransferase-like	Ribulose-phoshate binding barrel	1	1
Calcium-dependent phosphotriesterase	Quinoprotein alcohol dehydrogenase-like	1	1
ATP synthase (F1-ATPase), gamma subunit	Riboflavin synthase domain-like	1	1
Heme-dependent peroxidases	DNA/RNA polymerases	1	1
PreATP-grasp domain	Methylglyoxal synthase-like	1	1
DNA primase core	CRAL/TRIO N-terminal domain	1	1
PLP-binding barrel	PLP-binding barrel	1	1
Cyclophilin-like	RNA-binding domain, RBD	1	1
Protein kinase-like (PK-like)	PLP-dependent transferases	1	1
PR-1-like	UDP-Glycosyltransferase/glycogen phosphorylase	1	1
E set domains	E set domains	1	1
Actin depolymerizing proteins	CBS-domain pair	1	1
Nop10-like SnoRNP	S-adenosyl-L-methionine-dependent methyltransferases	1	1
14-3-3 protein	Protein kinase-like (PK-like)	1	1
Clavaminate synthase-like	DnaJ/Hsp40 cysteine-rich domain	1	1
CRAL/TRIO domain	PUA domain-like	1	1
D-aminoacid aminotransferase-like PLP-dependent enzymes	D-aminoacid aminotransferase-like PLP-dependent enzymes	1	1
UBA-like	Ribonuclease H-like	1	1
RNI-like	Radical SAM enzymes	1	1
Formyltransferase	Ribonuclease H-like	1	1
14-3-3 protein	UBC-like	1	1
Heme-dependent peroxidases	L30e-like	1	1
Thioredoxin-like	alpha/beta-Hydrolases	1	1
Cysteine proteinases	E set domains	1	1
FAD/NAD(P)-binding domain	Trimeric LpxA-like enzymes	1	1
HAD-like	Six-hairpin glycosidases	1	1
Acyl-CoA binding protein	P-loop containing nucleoside triphosphate hydrolases	1	1
HLH, helix-loop-helix DNA-binding domain	WRKY DNA-binding domain	1	1
Protein kinase-like (PK-like)	Glycerol-3-phosphate (1)-acyltransferase	1	1
Protein kinase-like (PK-like)	GroEL equatorial domain-like	1	1
HMA, heavy metal-associated domain	Glycosyl hydrolase domain	1	1
RING/U-box	DNase I-like	1	1
(Trans)glycosidases	PP2C-like	1	1
RNA-binding domain, RBD	GroES-like	1	1
CBS-domain pair	Cysteine proteinases	1	1
Thiolase-like	L domain-like	1	1
Chelatase	Chlorophyll a-b binding protein	1	1
Di-copper centre-containing domain	DNA/RNA polymerases	1	1
Protein kinase-like (PK-like)	t-snare proteins	1	1
UDP-Glycosyltransferase/glycogen phosphorylase	AF0104/ALDC/Ptd012-like	1	1
ArfGap/RecO-like zinc finger	SNARE-like	1	1
Metallo-dependent hydrolases	Ribonuclease H-like	1	1
Thioredoxin-like	(Trans)glycosidases	1	1
L domain-like	14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	1	1
Cu,Zn superoxide dismutase-like	Chaperone J-domain	1	1
Putative isomerase YbhE	DNase I-like	1	1
Aldolase	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	1	1
FabD/lysophospholipase-like	HCP-like	1	1
D-ribose-5-phosphate isomerase (RpiA), lid domain	DNA/RNA polymerases	1	1
Carbohydrate phosphatase	Apolipoprotein A-I	1	1
HD-domain/PDEase-like	alpha/beta-Hydrolases	1	1
MAL13P1.257-like	Bacterial exopeptidase dimerisation domain	1	1
(Trans)glycosidases	Adenine nucleotide alpha hydrolases-like	1	1
Rad51 N-terminal domain-like	FYVE/PHD zinc finger	1	1
FYVE/PHD zinc finger	Clavaminate synthase-like	1	1
Ribosomal protein L1	Ribonuclease H-like	1	1
beta-Galactosidase/glucuronidase domain	beta-Galactosidase/glucuronidase domain	1	1
P-domain of calnexin/calreticulin	P-loop containing nucleoside triphosphate hydrolases	1	1
Radical SAM enzymes	Acyl-CoA N-acyltransferases (Nat)	1	1
Tubby C-terminal domain-like	Prokaryotic ribosomal protein L17	1	1
F-box domain	ApaG-like	1	1
S-adenosyl-L-methionine-dependent methyltransferases	Protein kinase-like (PK-like)	1	1
Translation proteins	Nucleotide-diphospho-sugar transferases	1	1
EPT/RTPC-like	EPT/RTPC-like	1	1
beta-beta-alpha zinc fingers	CCCH zinc finger	1	1
Concanavalin A-like lectins/glucanases	WD40 repeat-like	1	1
Quinoprotein alcohol dehydrogenase-like	alpha/beta-Hydrolases	1	1
Calcium ATPase, transmembrane domain M	(Trans)glycosidases	1	1
Ribosomal protein S10	Subtilisin-like	1	1
SAICAR synthase-like	RING/U-box	1	1
Clavaminate synthase-like	RNI-like	1	1
Acid proteases	Thioredoxin-like	1	1
GYF domain	Glucocorticoid receptor-like (DNA-binding domain)	1	1
F-box domain	Nucleotide-diphospho-sugar transferases	1	1
DnaJ/Hsp40 cysteine-rich domain	alpha/beta-Hydrolases	1	1
Eukaryotic type KH-domain (KH-domain type I)	Sm-like ribonucleoproteins	1	1
L-aspartase-like	Class II aaRS and biotin synthetases	1	1
Acetyl-CoA synthetase-like	Trimeric LpxA-like enzymes	1	1
Ribosomal protein S5 domain 2-like	FabD/lysophospholipase-like	1	1
UBC-like	Histone-fold	1	1
SBT domain	(Trans)glycosidases	1	1
Leucine zipper domain	alpha/beta-Hydrolases	1	1
Creatinase/aminopeptidase	Histone-fold	1	1
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor	PRTase-like	1	1
ARM repeat	Bacterial exopeptidase dimerisation domain	1	1
DAK1/DegV-like	DhaL-like	1	1
HLH, helix-loop-helix DNA-binding domain	Chromo domain-like	1	1
Pre-protein crosslinking domain of SecA	Retrovirus zinc finger-like domains	1	1
GHMP Kinase, C-terminal domain	(Trans)glycosidases	1	1
Cyclophilin-like	DnaJ/Hsp40 cysteine-rich domain	1	1
NAC domain	PEBP-like	1	1
BAH domain	Protein kinase-like (PK-like)	1	1
WRKY DNA-binding domain	S-adenosyl-L-methionine-dependent methyltransferases	1	1
Tubby C-terminal domain-like	LEA14-like	1	1
DNA/RNA polymerases	Trimeric LpxA-like enzymes	1	1
HLH, helix-loop-helix DNA-binding domain	Actin-crosslinking proteins	1	1
MurCD N-terminal domain	MurD-like peptide ligases, catalytic domain	1	1
E set domains	S-adenosyl-L-methionine-dependent methyltransferases	1	1
Acid phosphatase/Vanadium-dependent haloperoxidase	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	1	1
Pectin lyase-like	P-loop containing nucleoside triphosphate hydrolases	1	1
Leucine zipper domain	RCC1/BLIP-II	1	1
beta-lactamase/transpeptidase-like	beta-lactamase/transpeptidase-like	1	1
Barwin-like endoglucanases	DPP6 N-terminal domain-like	1	1
EF-hand	Homeodomain-like	1	1
Rad51 N-terminal domain-like	ARID-like	1	1
BAR/IMD domain-like	Cytochrome P450	1	1
P-loop containing nucleoside triphosphate hydrolases	GIY-YIG endonuclease	1	1
V-type ATP synthase subunit C	V-type ATP synthase subunit C	1	1
alpha-helical ferredoxin	Acetyl-CoA synthetase-like	1	1
LysM domain	Ubiquitin-like	1	1
GHMP Kinase, C-terminal domain	CCCH zinc finger	1	1
Carbonic anhydrase	Carbonic anhydrase	1	1
Homeodomain-like	Mitochondrial carrier	1	1
Prokaryotic type KH domain (KH-domain type II)	Prokaryotic type KH domain (KH-domain type II)	1	1
BRCT domain	Lesion bypass DNA polymerase (Y-family), little finger domain	1	1
EF-hand	TPR-like	1	1
F-box domain	Acyl-CoA N-acyltransferases (Nat)	1	1
Ankyrin repeat	HIT/MYND zinc finger-like	1	1
NAD(P)-binding Rossmann-fold domains	SET domain	1	1
TPR-like	RNI-like	1	1
HAD-like	MFS general substrate transporter	1	1
GHMP Kinase, C-terminal domain	GHMP Kinase, C-terminal domain	1	1
Functional domain of the splicing factor Prp18	Cupredoxins	1	1
AraD/HMP-PK domain-like	HAD-like	1	1
Aminoacid dehydrogenase-like, N-terminal domain	ARM repeat	1	1
ARM repeat	N-terminal nucleophile aminohydrolases (Ntn hydrolases)	1	1
PLP-dependent transferases	FYVE/PHD zinc finger	1	1
Cap-Gly domain	Ribonuclease H-like	1	1
Riboflavin synthase domain-like	Riboflavin synthase domain-like	1	1
TATA-box binding protein-like	DNA-glycosylase	1	1
Ribonuclease H-like	HAD-like	1	1
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain	Retrovirus zinc finger-like domains	1	1
HLH, helix-loop-helix DNA-binding domain	ACP-like	1	1
Ran binding protein zinc finger-like	Nudix	1	1
Homeodomain-like	Nop domain	1	1
S-adenosyl-L-methionine-dependent methyltransferases	Six-hairpin glycosidases	1	1
Aquaporin-like	ACT-like	1	1
Class I glutamine amidotransferase-like	ADC synthase	1	1
PP2C-like	Glutathione synthetase ATP-binding domain-like	1	1
(Phosphotyrosine protein) phosphatases II	alpha/beta-Hydrolases	1	1
Calpain large subunit, middle domain (domain III)	TAZ domain	1	1
P-loop containing nucleoside triphosphate hydrolases	CRAL/TRIO N-terminal domain	1	1
SNARE-like	PRTase-like	1	1
Protein kinase-like (PK-like)	beta-lactamase/transpeptidase-like	1	1
Cysteine proteinases	Periplasmic binding protein-like II	1	1
SNARE fusion complex	PH domain-like	1	1
RNA-binding domain, RBD	Nucleic acid-binding proteins	1	1
Bet v1-like	Hect, E3 ligase catalytic domain	1	1
Nicotinate/Quinolinate PRTase C-terminal domain-like	Nicotinate/Quinolinate PRTase C-terminal domain-like	1	1
"Winged helix" DNA-binding domain	Saposin	1	1
Zn-dependent exopeptidases	MFS general substrate transporter	1	1
Periplasmic binding protein-like II	Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain	1	1
RNA-binding domain, RBD	Ribonuclease PH domain 2-like	1	1
Tubulin C-terminal domain-like	Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	1	1
ClpP/crotonase	Ribosomal protein L7/12, oligomerisation (N-terminal) domain	1	1
Cyclophilin-like	Retrovirus zinc finger-like domains	1	1
Calcium ATPase, transmembrane domain M	Six-hairpin glycosidases	1	1
SufE/NifU	BolA-like	1	1
Chaperone J-domain	RNA-binding domain, RBD	1	1
Concanavalin A-like lectins/glucanases	Clathrin adaptor appendage domain	1	1
GroEL apical domain-like	Cysteine proteinases	1	1
PP2C-like	Outer arm dynein light chain 1	1	1
P-loop containing nucleoside triphosphate hydrolases	NAD(P)-linked oxidoreductase	1	1
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	Nucleotide-binding domain	1	1
Protein kinase-like (PK-like)	Glucocorticoid receptor-like (DNA-binding domain)	1	1
Ribonuclease H-like	Terpenoid synthases	1	1
Ribosomal protein L22	Tetrahydrobiopterin biosynthesis enzymes-like	1	1
NAD kinase/diacylglycerol kinase-like	DNA-binding pseudobarrel domain	1	1
WD40 repeat-like	Zn-binding ribosomal proteins	1	1
Cryptochrome/photolyase, N-terminal domain	alpha/beta-Hydrolases	1	1
Cell cycle regulatory proteins	Cell cycle regulatory proteins	1	1
PUA domain-like	eIF1-like	1	1
Protein kinase-like (PK-like)	DNA-binding domain	1	1
AlbA-like	AlbA-like	1	1
Prefoldin	PR-1-like	1	1
HAD-like	YrdC/RibB	1	1
UBA-like	Preprotein translocase SecY subunit	1	1
SRF-like	(Trans)glycosidases	1	1
RING/U-box	Bacterial exopeptidase dimerisation domain	1	1
Metallo-dependent hydrolases	Protein kinase-like (PK-like)	1	1
ARM repeat	Clavaminate synthase-like	1	1
RNA-binding domain, RBD	Ribonuclease H-like	1	1
Profilin (actin-binding protein)	Protein kinase-like (PK-like)	1	1
PH domain-like	BSD domain-like	1	1
Retrovirus zinc finger-like domains	Ribosomal protein S5 domain 2-like	1	1
SMI1/KNR4-like	ApaG-like	1	1
beta-sandwich domain of Sec23/24	C2 domain (Calcium/lipid-binding domain, CaLB)	1	1
PX domain	BAR/IMD domain-like	1	1
PA domain	SpoIIaa-like	1	1
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor	Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor	1	1
Concanavalin A-like lectins/glucanases	S-adenosyl-L-methionine-dependent methyltransferases	1	1
HLH, helix-loop-helix DNA-binding domain	Actin depolymerizing proteins	1	1
Ribonuclease Rh-like	Ribonuclease Rh-like	1	1
Ankyrin repeat	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain	1	1
P-loop containing nucleoside triphosphate hydrolases	Ribosomal protein S7	1	1
Transthyretin (synonym: prealbumin)	ClpP/crotonase	1	1
Bet v1-like	Multidrug resistance efflux transporter EmrE	1	1
E2F-DP heterodimerization region	RNA-binding domain, RBD	1	1
DNase I-like	Acyl-CoA N-acyltransferases (Nat)	1	1
t-snare proteins	P-loop containing nucleoside triphosphate hydrolases	1	1
Glutathione synthetase ATP-binding domain-like	Glutathione synthetase ATP-binding domain-like	1	1
Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e	1	1
ClpS-like	RCC1/BLIP-II	1	1
CRAL/TRIO N-terminal domain	Sec1/munc18-like (SM) proteins	1	1
beta-carbonic anhydrase, cab	UBC-like	1	1
Phosphofructokinase	"Winged helix" DNA-binding domain	1	1
ABC transporter transmembrane region	Ribonuclease H-like	1	1
Actin depolymerizing proteins	(Trans)glycosidases	1	1
Arginase/deacetylase	alpha/beta-Hydrolases	1	1
FAD/NAD(P)-binding domain	FMN-binding split barrel	1	1
Nucleotide-binding domain	Acetyl-CoA synthetase-like	1	1
5' to 3' exonuclease, C-terminal subdomain	C-terminal autoproteolytic domain of nucleoporin nup98	1	1
Nucleotide-diphospho-sugar transferases	DNA/RNA polymerases	1	1
Phospholipase C/P1 nuclease	Phospholipase C/P1 nuclease	1	1
Concanavalin A-like lectins/glucanases	Ribonuclease H-like	1	1
UDP-Glycosyltransferase/glycogen phosphorylase	NHL repeat	1	1
eIF-2-alpha, C-terminal domain	HLH, helix-loop-helix DNA-binding domain	1	1
Translation proteins	Retrovirus zinc finger-like domains	1	1
Nucleic acid-binding proteins	Osmotin, thaumatin-like protein	1	1
WD40 repeat-like	Soluble quinoprotein glucose dehydrogenase	1	1
IlvD/EDD N-terminal domain-like	LeuD/IlvD-like	1	1
Actin depolymerizing proteins	POZ domain	1	1
ssDNA-binding transcriptional regulator domain	LexA/Signal peptidase	1	1
2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	1	1
PurM N-terminal domain-like	Class I glutamine amidotransferase-like	1	1
Nucleic acid-binding proteins	FAS1 domain	1	1
(Trans)glycosidases	CRAL/TRIO domain	1	1
SIS domain	CBS-domain pair	1	1
PYP-like sensor domain (PAS domain)	CheY-like	1	1
2Fe-2S ferredoxin-like	4Fe-4S ferredoxins	1	1
RING/U-box	Mitochondrial carrier	1	1
YjeF N-terminal domain-like	FMN-binding split barrel	1	1
Ankyrin repeat	Translation proteins	1	1
RmlC-like cupins	L domain-like	1	1
At5g01610-like	Voltage-gated potassium channels	1	1
Terpenoid cyclases/Protein prenyltransferases	DNA/RNA polymerases	1	1
FAD/NAD(P)-binding domain	Ribonuclease H-like	1	1
beta-beta-alpha zinc fingers	S-adenosyl-L-methionine-dependent methyltransferases	1	1
Families 57/38 glycoside transferase middle domain	SGNH hydrolase	1	1
Bet v1-like	Rhodanese/Cell cycle control phosphatase	1	1
Ribonuclease H-like	CoA-dependent acyltransferases	1	1
Voltage-gated potassium channels	Ribonuclease H-like	1	1
PIN domain-like	Nucleic acid-binding proteins	1	1
FAD-binding/transporter-associated domain-like	S-adenosyl-L-methionine-dependent methyltransferases	1	1
Thioredoxin-like	Ribulose-phoshate binding barrel	1	1
HLH, helix-loop-helix DNA-binding domain	Thioesterase/thiol ester dehydrase-isomerase	1	1
Cupredoxins	Cysteine proteinases	1	1
beta-sandwich domain of Sec23/24	beta-sandwich domain of Sec23/24	1	1
HSP20-like chaperones	Ribonuclease H-like	1	1
Pectin lyase-like	alpha/beta-Hydrolases	1	1
Protein kinase-like (PK-like)	Retrovirus zinc finger-like domains	1	1
Ribosomal protein S8	P-loop containing nucleoside triphosphate hydrolases	1	1
Subunits of heterodimeric actin filament capping protein Capz	Subunits of heterodimeric actin filament capping protein Capz	1	1
Alanine racemase C-terminal domain-like	Dihydrofolate reductase-like	1	1
Double-stranded DNA-binding domain	beta-beta-alpha zinc fingers	1	1
DNase I-like	NAD(P)-binding Rossmann-fold domains	1	1
Metallo-dependent phosphatases	Metallo-hydrolase/oxidoreductase	1	1
L domain-like	Tubulin nucleotide-binding domain-like	1	1
WD40 repeat-like	Heme-dependent peroxidases	1	1
ENTH/VHS domain	Nucleotide-diphospho-sugar transferases	1	1
UDP-Glycosyltransferase/glycogen phosphorylase	Mannose-binding lectins	1	1
Thioredoxin-like	Tubulin nucleotide-binding domain-like	1	1
NAC domain	Nucleotide-diphospho-sugar transferases	1	1
vWA-like	Riboflavin kinase-like	1	1
Nitrous oxide reductase, N-terminal domain	WD40 repeat-like	1	1
P-loop containing nucleoside triphosphate hydrolases	Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor	1	1
Ribosomal protein S8	UBC-like	1	1
TPR-like	ENTH/VHS domain	1	1
PRTase-like	PapD-like	1	1
Ferredoxin reductase-like, C-terminal NADP-linked domain	Terpenoid synthases	1	1
RNA-binding domain, RBD	PUA domain-like	1	1
Glucocorticoid receptor-like (DNA-binding domain)	WGR domain-like	1	1
Zinc-binding domain of translation initiation factor 2 beta	ClpP/crotonase	1	1
Cytidine deaminase-like	YbiA-like	1	1
F-box domain	Radical SAM enzymes	1	1
P-loop containing nucleoside triphosphate hydrolases	Rubredoxin-like	1	1
t-snare proteins	t-snare proteins	1	1
Skp1 dimerisation domain-like	Protein kinase-like (PK-like)	1	1
PLP-dependent transferases	BRCT domain	1	1
DNA-binding domain	alpha/beta-Hydrolases	1	1
Retrovirus zinc finger-like domains	Subtilisin-like	1	1
WRKY DNA-binding domain	CCCH zinc finger	1	1
RNI-like	Chlorophyll a-b binding protein	1	1
Mechanosensitive channel protein MscS (YggB), transmembrane region	Sm-like ribonucleoproteins	1	1
FGAM synthase PurL, linker domain	PurM N-terminal domain-like	1	1
PRP4-like	WD40 repeat-like	1	1
Nucleotidyltransferase	Cyclin-like	1	1
DNA/RNA polymerases	C2 domain (Calcium/lipid-binding domain, CaLB)	1	1
TK C-terminal domain-like	Soluble quinoprotein glucose dehydrogenase	1	1
4Fe-4S ferredoxins	Formate dehydrogenase/DMSO reductase, domains 1-3	1	1
NAD(P)-binding Rossmann-fold domains	Adenine nucleotide alpha hydrolases-like	1	1
ARM repeat	DNA-binding domain	1	1
Hypothetical protein YjiA, C-terminal domain	Homeodomain-like	1	1
MAPEG domain-like	Ribonuclease H-like	1	1
RNA-binding domain, RBD	Acid proteases	1	1
Acid proteases	HMA, heavy metal-associated domain	1	1
Nucleotide-diphospho-sugar transferases	Cyclin-like	1	1
beta and beta-prime subunits of DNA dependent RNA-polymerase	Actin-like ATPase domain	1	1
TPR-like	Rhodanese/Cell cycle control phosphatase	1	1
DNA/RNA polymerases	GAT-like domain	1	1
L domain-like	Translation proteins SH3-like domain	1	1
Chaperone J-domain	Chalcone isomerase	1	1
Rudiment single hybrid motif	N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)	1	1
Galactose mutarotase-like	UBC-like	1	1
Carbohydrate phosphatase	Carbohydrate phosphatase	1	1
Homeodomain-like	UBC-like	1	1
eIF2alpha middle domain-like	HLH, helix-loop-helix DNA-binding domain	1	1
HLH, helix-loop-helix DNA-binding domain	DNA-binding domain	1	1
post-AAA+ oligomerization domain-like	Acid proteases	1	1
E set domains	Homeodomain-like	1	1
Concanavalin A-like lectins/glucanases	Retrovirus zinc finger-like domains	1	1
Terpenoid synthases	Retrovirus zinc finger-like domains	1	1
S-adenosyl-L-methionine-dependent methyltransferases	Heme-dependent peroxidases	1	1
ENTH/VHS domain	SET domain	1	1
Ribonuclease H-like	GAT-like domain	1	1
Quinoprotein alcohol dehydrogenase-like	P-loop containing nucleoside triphosphate hydrolases	1	1
PRTase-like	Ribulose-phoshate binding barrel	1	1
RNA-binding domain, RBD	(Trans)glycosidases	1	1
FtsH protease domain-like	FAS1 domain	1	1
Acyl-CoA N-acyltransferases (Nat)	Terpenoid synthases	1	1
PHP domain-like	PHP domain-like	1	1
Poly A polymerase C-terminal region-like	Cyclin-like	1	1
F-box domain	Cytochrome b5-like heme/steroid binding domain	1	1
Ubiquitin-like	Heme-dependent peroxidases	1	1
HAD-like	beta-beta-alpha zinc fingers	1	1
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	S13-like H2TH domain	1	1
SRF-like	Nucleotide-diphospho-sugar transferases	1	1
Phosphoglycerate mutase-like	Homeodomain-like	1	1
NAD(P)-binding Rossmann-fold domains	YgbK-like	1	1