Domain combination pairs in Pinus taeda

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Domain combination pairs

1451 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N)	Superfamily (C)	Number of occurrances	Number unique
L domain-like	P-loop containing nucleoside triphosphate hydrolases	377	166
L domain-like	L domain-like	341	188
L domain-like	Protein kinase-like (PK-like)	293	78
Toll/Interleukin receptor TIR domain	P-loop containing nucleoside triphosphate hydrolases	288	127
P-loop containing nucleoside triphosphate hydrolases	P-loop containing nucleoside triphosphate hydrolases	239	115
Protein kinase-like (PK-like)	Protein kinase-like (PK-like)	232	66
Toll/Interleukin receptor TIR domain	L domain-like	186	110
RNI-like	L domain-like	154	90
Cupredoxins	Cupredoxins	107	19
Actin-like ATPase domain	Actin-like ATPase domain	103	16
RNA-binding domain, RBD	RNA-binding domain, RBD	100	27
Barwin-like endoglucanases	PHL pollen allergen	98	13
UDP-Glycosyltransferase/glycogen phosphorylase	UDP-Glycosyltransferase/glycogen phosphorylase	87	10
GroES-like	NAD(P)-binding Rossmann-fold domains	86	13
RNI-like	Protein kinase-like (PK-like)	83	40
Cytochrome P450	Cytochrome P450	81	14
NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	74	26
Terpenoid synthases	Terpenoid cyclases/Protein prenyltransferases	72	12
P-loop containing nucleoside triphosphate hydrolases	"Winged helix" DNA-binding domain	72	48
P-loop containing nucleoside triphosphate hydrolases	RNI-like	72	48
TPR-like	TPR-like	70	23
Thioredoxin-like	GST C-terminal domain-like	70	8
RING/U-box	RING/U-box	60	21
ABC transporter transmembrane region	P-loop containing nucleoside triphosphate hydrolases	60	19
(Trans)glycosidases	(Trans)glycosidases	58	21
alpha/beta-Hydrolases	alpha/beta-Hydrolases	58	16
Thiolase-like	Thiolase-like	55	10
Toll/Interleukin receptor TIR domain	"Winged helix" DNA-binding domain	50	35
F-box domain	Kelch motif	50	9
Multidrug resistance efflux transporter EmrE	Multidrug resistance efflux transporter EmrE	49	8
Plant invertase/pectin methylesterase inhibitor	Pectin lyase-like	47	8
Toll/Interleukin receptor TIR domain	Toll/Interleukin receptor TIR domain	47	38
RNI-like	RNI-like	46	34
"Winged helix" DNA-binding domain	L domain-like	44	32
DNA-binding domain	DNA-binding domain	43	11
(Trans)glycosidases	Glycosyl hydrolase domain	41	9
Heme-dependent peroxidases	Heme-dependent peroxidases	41	4
Clavaminate synthase-like	Clavaminate synthase-like	41	7
Concanavalin A-like lectins/glucanases	Protein kinase-like (PK-like)	40	18
"Winged helix" DNA-binding domain	S-adenosyl-L-methionine-dependent methyltransferases	40	6
ARM repeat	ARM repeat	39	17
POZ domain	Skp1 dimerisation domain-like	38	9
Actin-like ATPase domain	Heat shock protein 70kD (HSP70), peptide-binding domain	38	12
Thioredoxin-like	Thioredoxin-like	38	20
Cullin homology domain	Cullin repeat-like	37	10
Toll/Interleukin receptor TIR domain	RNI-like	36	30
Formate/glycerate dehydrogenase catalytic domain-like	NAD(P)-binding Rossmann-fold domains	36	12
GroES-like	GroES-like	35	11
F-box domain	RNI-like	35	11
FAD/NAD(P)-binding domain	FAD-linked reductases, C-terminal domain	34	10
Cyclin-like	Cyclin-like	34	14
Pectin lyase-like	Pectin lyase-like	34	10
S-adenosyl-L-methionine-dependent methyltransferases	S-adenosyl-L-methionine-dependent methyltransferases	33	5
Heat shock protein 70kD (HSP70), peptide-binding domain	Heat shock protein 70kD (HSP70), C-terminal subdomain	33	10
ABC transporter transmembrane region	ABC transporter transmembrane region	33	12
Calcium ATPase, transmembrane domain M	HAD-like	32	17
Substrate-binding domain of HMG-CoA reductase	NAD-binding domain of HMG-CoA reductase	31	11
Calcium ATPase, transduction domain A	Calcium ATPase, transmembrane domain M	30	20
Tubulin nucleotide-binding domain-like	Tubulin C-terminal domain-like	30	7
NAD(P)-binding Rossmann-fold domains	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	29	11
Cullin homology domain	"Winged helix" DNA-binding domain	29	10
RING/U-box	ARM repeat	29	7
MFS general substrate transporter	MFS general substrate transporter	29	10
(Trans)glycosidases	Beta-D-glucan exohydrolase, C-terminal domain	29	5
Terpenoid synthases	Terpenoid synthases	28	9
alpha-D-mannose-specific plant lectins	Protein kinase-like (PK-like)	27	12
Actin-like ATPase domain	Heat shock protein 70kD (HSP70), C-terminal subdomain	27	8
Acid proteases	Acid proteases	26	7
Concanavalin A-like lectins/glucanases	Concanavalin A-like lectins/glucanases	26	15
FAD/NAD(P)-binding domain	FAD/NAD(P)-binding domain	26	11
Periplasmic binding protein-like I	Periplasmic binding protein-like II	25	11
Purple acid phosphatase, N-terminal domain	Metallo-dependent phosphatases	25	8
P-loop containing nucleoside triphosphate hydrolases	Translation proteins	25	16
Terpenoid cyclases/Protein prenyltransferases	Terpenoid cyclases/Protein prenyltransferases	24	9
Homeodomain-like	Homeodomain-like	24	11
Metal cation-transporting ATPase, ATP-binding domain N	Calcium ATPase, transmembrane domain M	23	14
Lipase/lipooxygenase domain (PLAT/LH2 domain)	Lipoxigenase	23	7
beta-beta-alpha zinc fingers	beta-beta-alpha zinc fingers	22	9
Calcium ATPase, transduction domain A	HAD-like	22	14
Ypt/Rab-GAP domain of gyp1p	Ypt/Rab-GAP domain of gyp1p	21	7
Metal cation-transporting ATPase, ATP-binding domain N	HAD-like	20	11
NAD(P)-binding Rossmann-fold domains	6-phosphogluconate dehydrogenase C-terminal domain-like	19	7
Eukaryotic type KH-domain (KH-domain type I)	Eukaryotic type KH-domain (KH-domain type I)	19	14
Six-hairpin glycosidases	Six-hairpin glycosidases	19	3
Histone-fold	Histone-fold	19	6
GroEL equatorial domain-like	GroEL apical domain-like	19	10
HCP-like	HCP-like	18	7
Calcium ATPase, transduction domain A	Metal cation-transporting ATPase, ATP-binding domain N	18	11
Cullin repeat-like	"Winged helix" DNA-binding domain	18	7
TPR-like	HCP-like	18	9
CRAL/TRIO N-terminal domain	CRAL/TRIO domain	17	8
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	Ribosomal protein S5 domain 2-like	17	13
C2 domain (Calcium/lipid-binding domain, CaLB)	C2 domain (Calcium/lipid-binding domain, CaLB)	17	9
FAD-binding/transporter-associated domain-like	FAD-linked oxidases, C-terminal domain	17	4
Plant lectins/antimicrobial peptides	Lysozyme-like	17	7
"Winged helix" DNA-binding domain	"Winged helix" DNA-binding domain	16	10
HMA, heavy metal-associated domain	HMA, heavy metal-associated domain	16	10
CCCH zinc finger	CCCH zinc finger	16	12
GroEL-intermediate domain like	GroEL equatorial domain-like	16	10
Riboflavin synthase domain-like	Ferredoxin reductase-like, C-terminal NADP-linked domain	15	7
Acetyl-CoA synthetase-like	Acetyl-CoA synthetase-like	15	5
E set domains	Galactose oxidase, central domain	15	5
ACT-like	ACT-like	15	9
C2 domain (Calcium/lipid-binding domain, CaLB)	Phospholipase D/nuclease	15	10
Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	15	6
GroEL-intermediate domain like	GroEL apical domain-like	15	9
Bet v1-like	Bet v1-like	15	5
HAD-like	HAD-like	15	6
EF-hand	EF-hand	14	6
Galactose-binding domain-like	(Trans)glycosidases	14	10
Galactose-binding domain-like	Galactose-binding domain-like	14	8
RmlC-like cupins	RmlC-like cupins	14	4
NAD(P)-binding Rossmann-fold domains	LDH C-terminal domain-like	14	4
Trypsin-like serine proteases	PDZ domain-like	14	3
DNA-binding domain	DNA-binding pseudobarrel domain	14	6
"Winged helix" DNA-binding domain	RNI-like	14	13
Subtilisin-like	Subtilisin-like	13	10
Arabinanase/levansucrase/invertase	Concanavalin A-like lectins/glucanases	13	3
Zn-dependent exopeptidases	Bacterial exopeptidase dimerisation domain	13	6
WRKY DNA-binding domain	WRKY DNA-binding domain	13	4
F-box domain	F-box domain	12	10
Actin depolymerizing proteins	Actin depolymerizing proteins	12	8
WD40 repeat-like	WD40 repeat-like	12	6
Kelch motif	Kelch motif	12	6
Adenine nucleotide alpha hydrolases-like	Protein kinase-like (PK-like)	12	3
Voltage-gated potassium channels	cAMP-binding domain-like	12	7
Cysteine proteinases	Cysteine proteinases	12	4
Protein kinase-like (PK-like)	EF-hand	12	2
Nucleotide-diphospho-sugar transferases	Nucleotide-diphospho-sugar transferases	12	7
PAZ domain	Ribonuclease H-like	12	7
Translation proteins	EF-G C-terminal domain-like	12	12
Cullin repeat-like	Cullin repeat-like	12	8
Barwin-like endoglucanases	Barwin-like endoglucanases	11	8
HSP40/DnaJ peptide-binding domain	HSP40/DnaJ peptide-binding domain	11	8
HMA, heavy metal-associated domain	Calcium ATPase, transmembrane domain M	11	9
ENTH/VHS domain	GAT-like domain	11	4
Aminoacid dehydrogenase-like, N-terminal domain	NAD(P)-binding Rossmann-fold domains	11	6
Aquaporin-like	Aquaporin-like	11	3
HMA, heavy metal-associated domain	Calcium ATPase, transduction domain A	11	9
Translation proteins	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain	11	4
EF-G C-terminal domain-like	Ribosomal protein S5 domain 2-like	11	10
S-adenosylmethionine synthetase	S-adenosylmethionine synthetase	11	4
Nucleic acid-binding proteins	Nucleic acid-binding proteins	11	7
Lysozyme-like	Lysozyme-like	11	6
alpha-D-mannose-specific plant lectins	alpha-D-mannose-specific plant lectins	10	6
PDZ domain-like	PDZ domain-like	10	2
Tubby C-terminal domain-like	Tubby C-terminal domain-like	10	2
Thioesterase/thiol ester dehydrase-isomerase	Thioesterase/thiol ester dehydrase-isomerase	10	5
P-loop containing nucleoside triphosphate hydrolases	EF-G C-terminal domain-like	10	10
UBC-like	UBC-like	10	6
PP2C-like	PP2C-like	10	3
F-box domain	Galactose oxidase, central domain	10	6
Double Clp-N motif	P-loop containing nucleoside triphosphate hydrolases	10	7
PLP-dependent transferases	PLP-dependent transferases	10	5
Phospholipase D/nuclease	Phospholipase D/nuclease	10	8
Periplasmic binding protein-like II	Periplasmic binding protein-like II	10	8
Ribonuclease H-like	Ribonuclease H-like	10	5
GAF domain-like	PYP-like sensor domain (PAS domain)	10	7
RNA-binding domain, RBD	Retrovirus zinc finger-like domains	9	4
P-loop containing nucleoside triphosphate hydrolases	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain	9	4
dsRNA-binding domain-like	Ribosomal protein S5 domain 2-like	9	2
Amine oxidase N-terminal region	Amine oxidase N-terminal region	9	3
(Trans)glycosidases	Chitinase insertion domain	9	2
Translation proteins	Ribosomal protein S5 domain 2-like	9	9
(Trans)glycosidases	Actin-crosslinking proteins	9	4
Ribonuclease H-like	DNA/RNA polymerases	9	4
FYVE/PHD zinc finger	FYVE/PHD zinc finger	9	9
Osmotin, thaumatin-like protein	Osmotin, thaumatin-like protein	9	8
dsRNA-binding domain-like	dsRNA-binding domain-like	9	3
Nucleotide-diphospho-sugar transferases	RING/U-box	9	3
RNase III domain-like	dsRNA-binding domain-like	9	8
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	CheY-like	9	5
PHL pollen allergen	PHL pollen allergen	9	8
POZ domain	POZ domain	9	8
HSP20-like chaperones	HSP20-like chaperones	9	4
FYVE/PHD zinc finger	SET domain	9	5
Nucleic acid-binding proteins	P-loop containing nucleoside triphosphate hydrolases	9	4
Nucleotide-diphospho-sugar transferases	Trimeric LpxA-like enzymes	9	4
Activating enzymes of the ubiquitin-like proteins	Activating enzymes of the ubiquitin-like proteins	9	3
Osmotin, thaumatin-like protein	Protein kinase-like (PK-like)	9	7
HMA, heavy metal-associated domain	HAD-like	9	7
Homeodomain-like	Bet v1-like	9	5
Ribosomal protein S5 domain 2-like	HSP90 C-terminal domain	9	7
CheY-like	Homeodomain-like	9	5
Amine oxidase N-terminal region	Amine oxidase catalytic domain	9	3
GST C-terminal domain-like	GST C-terminal domain-like	8	5
Chaperone J-domain	HSP40/DnaJ peptide-binding domain	8	5
RNase III domain-like	RNase III domain-like	8	8
P-loop containing nucleoside triphosphate hydrolases	post-AAA+ oligomerization domain-like	8	4
Periplasmic binding protein-like I	Periplasmic binding protein-like I	8	6
CheY-like	CheY-like	8	6
ARM repeat	P-loop containing nucleoside triphosphate hydrolases	8	6
Homodimeric domain of signal transducing histidine kinase	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	8	4
NAC domain	NAC domain	8	5
Lipoxigenase	Lipoxigenase	8	5
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	HSP90 C-terminal domain	8	7
Cysteine proteinases	Granulin repeat	7	5
Substrate-binding domain of HMG-CoA reductase	Substrate-binding domain of HMG-CoA reductase	7	5
EF-hand	Ferredoxin reductase-like, C-terminal NADP-linked domain	7	3
P-loop containing nucleoside triphosphate hydrolases	Ribosomal protein S5 domain 2-like	7	7
TPR-like	SET domain	7	3
RING/U-box	Protein kinase-like (PK-like)	7	4
Voltage-gated potassium channels	Ankyrin repeat	7	4
Chaperone J-domain	Chaperone J-domain	7	4
Outer arm dynein light chain 1	L domain-like	7	7
UROD/MetE-like	UROD/MetE-like	7	3
RING/U-box	vWA-like	7	3
P-loop containing nucleoside triphosphate hydrolases	Protein kinase-like (PK-like)	7	5
Skp1 dimerisation domain-like	Skp1 dimerisation domain-like	7	7
LuxS/MPP-like metallohydrolase	LuxS/MPP-like metallohydrolase	7	3
Plant invertase/pectin methylesterase inhibitor	Plant invertase/pectin methylesterase inhibitor	7	7
Subtilisin-like	PA domain	7	3
cAMP-binding domain-like	Ankyrin repeat	7	4
Thiamin diphosphate-binding fold (THDP-binding)	TK C-terminal domain-like	7	2
FMN-linked oxidoreductases	FMN-linked oxidoreductases	7	3
Ubiquitin-like	Ubiquitin-like	7	3
Homodimeric domain of signal transducing histidine kinase	CheY-like	7	3
PLP-binding barrel	Alanine racemase C-terminal domain-like	7	2
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	7	5
ValRS/IleRS/LeuRS editing domain	Nucleotidylyl transferase	7	4
Zinc hairpin stack	RING/U-box	6	4
Galactose mutarotase-like	Glycosyl hydrolase domain	6	3
NTF2-like	RNA-binding domain, RBD	6	3
NAD(P)-linked oxidoreductase	NAD(P)-linked oxidoreductase	6	1
Glucocorticoid receptor-like (DNA-binding domain)	AN1-like Zinc finger	6	6
ARID-like	HMG-box	6	2
PR-1-like	PR-1-like	6	1
Class II aaRS and biotin synthetases	Class II aaRS ABD-related	6	6
Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment	DNA breaking-rejoining enzymes	6	3
CHY zinc finger-like	RING/U-box	6	4
Phosphoenolpyruvate/pyruvate domain	PK C-terminal domain-like	6	3
Clc chloride channel	CBS-domain pair	6	4
Galactose mutarotase-like	(Trans)glycosidases	6	3
Thiamin diphosphate-binding fold (THDP-binding)	DHS-like NAD/FAD-binding domain	6	6
Adenine nucleotide alpha hydrolases-like	Adenine nucleotide alpha hydrolases-like	6	1
EF-G C-terminal domain-like	EF-G C-terminal domain-like	6	6
Leukotriene A4 hydrolase N-terminal domain	Metalloproteases ("zincins"), catalytic domain	6	3
Periplasmic binding protein-like II	ACT-like	6	4
ARM repeat	Hect, E3 ligase catalytic domain	6	5
F-box domain	HCP-like	6	3
PK beta-barrel domain-like	Phosphoenolpyruvate/pyruvate domain	6	3
FAS1 domain	FAS1 domain	6	5
HCP-like	HIT/MYND zinc finger-like	6	3
UDP-Glycosyltransferase/glycogen phosphorylase	HAD-like	6	3
Calponin-homology domain, CH-domain	P-loop containing nucleoside triphosphate hydrolases	6	3
GAF domain-like	GAF domain-like	6	5
Peptidase/esterase 'gauge' domain	alpha/beta-Hydrolases	6	4
Translation proteins	Translation proteins	6	6
FAD/NAD(P)-binding domain	FAD/NAD-linked reductases, dimerisation (C-terminal) domain	5	2
CHY zinc finger-like	Zinc hairpin stack	5	3
ADC-like	Cdc48 domain 2-like	5	3
PK beta-barrel domain-like	PK C-terminal domain-like	5	2
ADC-like	P-loop containing nucleoside triphosphate hydrolases	5	4
RCC1/BLIP-II	FYVE/PHD zinc finger	5	3
SNARE-like	SNARE fusion complex	5	1
Phosphoglucomutase, first 3 domains	Phosphoglucomutase, C-terminal domain	5	4
Zinc beta-ribbon	Zinc beta-ribbon	5	2
DNA-binding pseudobarrel domain	CAD & PB1 domains	5	2
CBS-domain pair	CBS-domain pair	5	4
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	Adenine nucleotide alpha hydrolases-like	5	2
Acyl-CoA N-acyltransferases (Nat)	Acyl-CoA N-acyltransferases (Nat)	5	2
F-box domain	HIT/MYND zinc finger-like	5	2
Phosphoglucomutase, first 3 domains	Phosphoglucomutase, first 3 domains	5	4
HAD-like	BRCT domain	5	3
Enolase N-terminal domain-like	Enolase C-terminal domain-like	5	3
Translational machinery components	L30e-like	5	5
ALDH-like	ALDH-like	5	2
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1	Translational machinery components	5	5
TRAF domain-like	POZ domain	5	3
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	5	5
Cystatin/monellin	Cystatin/monellin	5	1
P-loop containing nucleoside triphosphate hydrolases	Outer arm dynein light chain 1	5	5
Thioredoxin-like	Cysteine-rich domain	5	5
Cation efflux protein transmembrane domain-like	Cation efflux protein cytoplasmic domain-like	5	4
Concanavalin A-like lectins/glucanases	P-domain of calnexin/calreticulin	5	2
Cdc48 domain 2-like	P-loop containing nucleoside triphosphate hydrolases	5	5
Translation proteins SH3-like domain	Nucleic acid-binding proteins	5	3
P-loop containing nucleoside triphosphate hydrolases	FtsH protease domain-like	5	3
CoA-dependent acyltransferases	CoA-dependent acyltransferases	5	3
CCCH zinc finger	RNA-binding domain, RBD	5	3
EF-hand	Riboflavin synthase domain-like	5	2
(Phosphotyrosine protein) phosphatases II	C2 domain (Calcium/lipid-binding domain, CaLB)	5	2
FYVE/PHD zinc finger	P-loop containing nucleoside triphosphate hydrolases	4	4
Tubulin nucleotide-binding domain-like	Tubulin nucleotide-binding domain-like	4	3
vWA-like	C-terminal, gelsolin-like domain of Sec23/24	4	4
FAD-binding/transporter-associated domain-like	FAD-binding/transporter-associated domain-like	4	3
Ricin B-like lectins	Ricin B-like lectins	4	3
UBA-like	Thioredoxin-like	4	3
Phosphoenolpyruvate/pyruvate domain	Phosphoenolpyruvate/pyruvate domain	4	3
DNase I-like	DNase I-like	4	3
P-loop containing nucleoside triphosphate hydrolases	(Trans)glycosidases	4	3
Glucocorticoid receptor-like (DNA-binding domain)	Glucocorticoid receptor-like (DNA-binding domain)	4	3
SGNH hydrolase	SGNH hydrolase	4	2
Glycosyl hydrolase domain	Glycosyl hydrolase domain	4	2
beta-sandwich domain of Sec23/24	Zn-finger domain of Sec23/24	4	4
Nitrite/Sulfite reductase N-terminal domain-like	Nitrite and sulphite reductase 4Fe-4S domain-like	4	2
PP2C-like	NAD(P)-linked oxidoreductase	4	2
UBA-like	Ubiquitin-like	4	3
FYVE/PHD zinc finger	RING/U-box	4	4
Nucleotidylyl transferase	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	4	3
Nucleotidyltransferase	PAP/OAS1 substrate-binding domain	4	3
F-box domain	Tubby C-terminal domain-like	4	1
beta-sandwich domain of Sec23/24	Helical domain of Sec23/24	4	4
Domain of the SRP/SRP receptor G-proteins	P-loop containing nucleoside triphosphate hydrolases	4	4
Sec7 domain	ARM repeat	4	4
YhbY-like	YhbY-like	4	3
Retrovirus zinc finger-like domains	Retrovirus zinc finger-like domains	4	4
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	Type II DNA topoisomerase	4	3
DNA-binding pseudobarrel domain	DNA-binding pseudobarrel domain	4	4
Zn-finger domain of Sec23/24	Helical domain of Sec23/24	4	4
Ribosomal protein S5 domain 2-like	GHMP Kinase, C-terminal domain	4	3
PYP-like sensor domain (PAS domain)	PYP-like sensor domain (PAS domain)	4	3
Galactose mutarotase-like	Galactose mutarotase-like	4	1
Actin depolymerizing proteins	VHP, Villin headpiece domain	4	3
FMN-linked oxidoreductases	Alpha subunit of glutamate synthase, C-terminal domain	4	3
Acid proteases	Saposin	4	3
Homeodomain-like	FAD/NAD(P)-binding domain	4	3
Acyl-CoA dehydrogenase NM domain-like	Acyl-CoA dehydrogenase C-terminal domain-like	4	4
ARM repeat	WD40 repeat-like	4	4
beta-sandwich domain of Sec23/24	C-terminal, gelsolin-like domain of Sec23/24	4	4
WD40 repeat-like	P-loop containing nucleoside triphosphate hydrolases	4	3
Histone-fold	RNI-like	4	4
FKBP-like	TPR-like	4	2
Tudor/PWWP/MBT	FYVE/PHD zinc finger	4	4
(Trans)glycosidases	Ricin B-like lectins	4	2
P-loop containing nucleoside triphosphate hydrolases	Cytochrome P450	4	4
FKBP-like	FKBP-like	4	2
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	4	2
NAC domain	Clavaminate synthase-like	4	3
Ribosomal protein S5 domain 2-like	Type II DNA topoisomerase	4	3
PLC-like phosphodiesterases	PLC-like phosphodiesterases	4	4
Zn-finger domain of Sec23/24	C-terminal, gelsolin-like domain of Sec23/24	4	4
Mitochondrial carrier	Mitochondrial carrier	4	3
P-loop containing nucleoside triphosphate hydrolases	TPR-like	4	3
NTF2-like	NTF2-like	4	4
Toll/Interleukin receptor TIR domain	Outer arm dynein light chain 1	4	4
Dihydropteroate synthetase-like	6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK	4	4
beta-sandwich domain of Sec23/24	vWA-like	4	4
Zn-finger domain of Sec23/24	vWA-like	4	4
PEP carboxykinase N-terminal domain	PEP carboxykinase-like	4	2
vWA-like	Helical domain of Sec23/24	4	4
Helical domain of Sec23/24	C-terminal, gelsolin-like domain of Sec23/24	4	4
Staphylococcal nuclease	Tudor/PWWP/MBT	4	4
Cysteine-rich domain	Cysteine-rich domain	4	2
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	FMN-linked oxidoreductases	4	3
P-loop containing nucleoside triphosphate hydrolases	RING/U-box	4	3
Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	4	4
TPR-like	CAD & PB1 domains	4	4
Hect, E3 ligase catalytic domain	Hect, E3 ligase catalytic domain	4	3
Eukaryotic type KH-domain (KH-domain type I)	Chaperone J-domain	4	3
NagB/RpiA/CoA transferase-like	D-ribose-5-phosphate isomerase (RpiA), lid domain	4	2
UBA-like	UBA-like	4	3
CAD & PB1 domains	CAD & PB1 domains	4	3
LigB-like	LigB-like	3	2
Translation initiation factor 2 beta, aIF2beta, N-terminal domain	Zinc-binding domain of translation initiation factor 2 beta	3	3
Phosphoglycerate kinase	Phosphoglycerate kinase	3	1
Domain of poly(ADP-ribose) polymerase	ADP-ribosylation	3	3
Ankyrin repeat	Ankyrin repeat	3	3
AN1-like Zinc finger	AN1-like Zinc finger	3	3
vWA-like	vWA-like	3	2
TRAF domain-like	Cysteine proteinases	3	1
Protein kinase-like (PK-like)	"Winged helix" DNA-binding domain	3	3
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70	Zinc beta-ribbon	3	2
Metallo-dependent phosphatases	Metallo-dependent phosphatases	3	3
Leukotriene A4 hydrolase N-terminal domain	ARM repeat	3	1
Homeodomain-like	FAD-linked reductases, C-terminal domain	3	2
Metalloproteases ("zincins"), catalytic domain	ARM repeat	3	1
RING/U-box	TRAF domain-like	3	3
Calponin-homology domain, CH-domain	EB1 dimerisation domain-like	3	1
alpha-helical ferredoxin	Nucleotide-binding domain	3	2
E set domains	P-loop containing nucleoside triphosphate hydrolases	3	2
CAD & PB1 domains	Protein kinase-like (PK-like)	3	1
Folate-binding domain	Folate-binding domain	3	3
C2 domain (Calcium/lipid-binding domain, CaLB)	Formin homology 2 domain (FH2 domain)	3	1
PA domain	Zn-dependent exopeptidases	3	2
Acetyl-CoA synthetase-like	SRF-like	3	2
Kelch motif	Galactose oxidase, central domain	3	3
BEACH domain	WD40 repeat-like	3	2
Molybdopterin synthase subunit MoaE	Molybdopterin synthase subunit MoaE	3	2
ClpP/crotonase	NAD(P)-binding Rossmann-fold domains	3	2
Rap30/74 interaction domains	"Winged helix" DNA-binding domain	3	2
Aminoacid dehydrogenase-like, N-terminal domain	Aminoacid dehydrogenase-like, N-terminal domain	3	3
Elongation factor TFIIS domain 2	Zinc beta-ribbon	3	2
CCCH zinc finger	Eukaryotic type KH-domain (KH-domain type I)	3	3
Ankyrin repeat	P-loop containing nucleoside triphosphate hydrolases	3	2
Chromo domain-like	P-loop containing nucleoside triphosphate hydrolases	3	3
MCP/YpsA-like	MCP/YpsA-like	3	2
L-aspartase-like	L-aspartase-like	3	3
MurD-like peptide ligases, catalytic domain	MurD-like peptide ligases, peptide-binding domain	3	3
P-loop containing nucleoside triphosphate hydrolases	vWA-like	3	1
SET domain	SET domain	3	3
Folate-binding domain	Aminomethyltransferase beta-barrel domain	3	2
Saposin	Saposin	3	3
Six-hairpin glycosidases	vWA-like	3	3
DNA repair protein MutS, domain III	P-loop containing nucleoside triphosphate hydrolases	3	3
HMG-box	HMG-box	3	2
RING/U-box	WD40 repeat-like	3	3
GST C-terminal domain-like	eEF-1beta-like	3	1
Formate/glycerate dehydrogenase catalytic domain-like	Formate/glycerate dehydrogenase catalytic domain-like	3	2
PA domain	Transferrin receptor-like dimerisation domain	3	2
Voltage-gated potassium channels	Voltage-gated potassium channels	3	3
CRAL/TRIO N-terminal domain	Supernatant protein factor (SPF), C-terminal domain	3	2
Adenine nucleotide alpha hydrolases-like	RING/U-box	3	2
ARM repeat	C2 domain (Calcium/lipid-binding domain, CaLB)	3	3
(Phosphotyrosine protein) phosphatases II	Formin homology 2 domain (FH2 domain)	3	1
PAP/OAS1 substrate-binding domain	PAP/Archaeal CCA-adding enzyme, C-terminal domain	3	2
Ribosomal protein L31e	Ribosomal protein L31e	3	2
FabD/lysophospholipase-like	Probable ACP-binding domain of malonyl-CoA ACP transacylase	3	2
Mannose-binding lectins	Mannose-binding lectins	3	2
Ubiquitin-like	BAG domain	3	2
PEBP-like	PEBP-like	3	3
P-loop containing nucleoside triphosphate hydrolases	RNA-binding domain, RBD	3	3
BRCT domain	BRCT domain	3	3
DNA-binding domain	Tubulin C-terminal domain-like	3	3
Zn-dependent exopeptidases	Transferrin receptor-like dimerisation domain	3	2
Protein kinase-like (PK-like)	ARM repeat	3	3
FYVE/PHD zinc finger	Acyl-CoA N-acyltransferases (Nat)	3	3
HLH, helix-loop-helix DNA-binding domain	ACT-like	3	1
Nucleic acid-binding proteins	eIF2alpha middle domain-like	3	3
PriA/YqbF domain	GINS helical bundle-like	3	2
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70	Elongation factor TFIIS domain 2	3	2
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	3	3
t-snare proteins	SNARE fusion complex	3	2
Purple acid phosphatase, N-terminal domain	Purple acid phosphatase, N-terminal domain	3	3
P-loop containing nucleoside triphosphate hydrolases	Signal peptide-binding domain	3	2
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1	L30e-like	3	3
RNA-binding domain, RBD	PABC (PABP) domain	3	2
Chromo domain-like	Chromo domain-like	3	3
UBC-like	L domain-like	3	3
SRF-like	SRF-like	3	2
TRAF domain-like	TRAF domain-like	3	2
PA domain	RING/U-box	3	2
Ribosomal protein L16p/L10e	NAC domain	3	1
alpha/beta-Hydrolases	(Trans)glycosidases	3	3
NAD-binding domain of HMG-CoA reductase	NAD-binding domain of HMG-CoA reductase	3	3
"Winged helix" DNA-binding domain	E2F-DP heterodimerization region	3	2
CRAL/TRIO domain	Supernatant protein factor (SPF), C-terminal domain	3	2
SNARE-like	Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor	3	2
HMA, heavy metal-associated domain	Protein kinase-like (PK-like)	3	3
Insert subdomain of RNA polymerase alpha subunit	RBP11-like subunits of RNA polymerase	3	2
Acyl-CoA dehydrogenase C-terminal domain-like	Acyl-CoA dehydrogenase C-terminal domain-like	3	3
Ribonuclease Rh-like	Ribonuclease Rh-like	3	3
Urease, gamma-subunit	Composite domain of metallo-dependent hydrolases	2	2
DnaJ/Hsp40 cysteine-rich domain	HSP40/DnaJ peptide-binding domain	2	2
Lipase/lipooxygenase domain (PLAT/LH2 domain)	Lipase/lipooxygenase domain (PLAT/LH2 domain)	2	2
BRCT domain	WGR domain-like	2	2
LysM domain	LysM domain	2	2
Concanavalin A-like lectins/glucanases	PH domain-like	2	2
DNA repair protein MutS, domain I	DNA repair protein MutS, domain II	2	2
NAD(P)-binding Rossmann-fold domains	ACT-like	2	2
P-loop containing nucleoside triphosphate hydrolases	Initiation factor IF2/eIF5b, domain 3	2	2
P-loop containing nucleoside triphosphate hydrolases	Ribonuclease H-like	2	2
Histone-fold	Formate/glycerate dehydrogenase catalytic domain-like	2	2
Metallo-dependent hydrolases	Composite domain of metallo-dependent hydrolases	2	2
PH domain-like	HMG-box	2	2
Methionyl-tRNA synthetase (MetRS), Zn-domain	Nucleotidylyl transferase	2	2
MIT domain	P-loop containing nucleoside triphosphate hydrolases	2	1
PH domain-like	Cullin repeat-like	2	2
Rudiment single hybrid motif	Rudiment single hybrid motif	2	2
N-terminal domain of alpha and beta subunits of F1 ATP synthase	P-loop containing nucleoside triphosphate hydrolases	2	2
Histone-fold	F-box domain	2	2
Cytochrome P450	Protein kinase-like (PK-like)	2	1
ClpP/crotonase	ClpP/crotonase	2	2
PAZ domain	RNase III domain-like	2	2
Glutamine synthetase, N-terminal domain	Glutamine synthetase/guanido kinase	2	1
WWE domain	WWE domain	2	2
FYVE/PHD zinc finger	Chromo domain-like	2	2
Ribosomal protein L11, C-terminal domain	Ribosomal L11/L12e N-terminal domain	2	2
SAICAR synthase-like	SAICAR synthase-like	2	2
Plant lectins/antimicrobial peptides	Plant lectins/antimicrobial peptides	2	2
RNA-binding domain, RBD	HAD-like	2	2
E set domains	(Trans)glycosidases	2	1
FAD-binding/transporter-associated domain-like	Cytochrome P450	2	2
Oxidoreductase molybdopterin-binding domain	Cytochrome b5-like heme/steroid binding domain	2	2
MurE/MurF N-terminal domain	MurD-like peptide ligases, peptide-binding domain	2	2
6-phosphogluconate dehydrogenase C-terminal domain-like	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain	2	2
Actin depolymerizing proteins	C-terminal, gelsolin-like domain of Sec23/24	2	2
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	RNI-like	2	1
Ubiquitin-like	XPC-binding domain	2	1
HMA, heavy metal-associated domain	Metal cation-transporting ATPase, ATP-binding domain N	2	2
FYVE/PHD zinc finger	GroEL apical domain-like	2	1
Serine metabolism enzymes domain	ACT-like	2	2
Smc hinge domain	P-loop containing nucleoside triphosphate hydrolases	2	2
Tex N-terminal region-like	Ribonuclease H-like	2	2
Calcium ATPase, transduction domain A	P-loop containing nucleoside triphosphate hydrolases	2	2
N-terminal domain of adenylylcyclase associated protein, CAP	C-terminal domain of adenylylcyclase associated protein	2	1
Formate/glycerate dehydrogenase catalytic domain-like	ACT-like	2	2
RING/U-box	RNA-binding domain, RBD	2	2
Rhomboid-like	Ran binding protein zinc finger-like	2	2
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex	CoA-dependent acyltransferases	2	2
GAF domain-like	CheY-like	2	2
EF-hand	Ubiquitin-like	2	2
Ubiquitin-like	Retrovirus zinc finger-like domains	2	2
Eukaryotic type KH-domain (KH-domain type I)	RNA-binding domain, RBD	2	2
UBA-like	XPC-binding domain	2	1
P-loop containing nucleoside triphosphate hydrolases	dsRNA-binding domain-like	2	2
ENT-like	Tudor/PWWP/MBT	2	2
F1F0 ATP synthase subunit C	F1F0 ATP synthase subunit C	2	1
Voltage-gated potassium channels	EF-hand	2	2
DNA repair protein MutS, domain I	DNA repair protein MutS, domain III	2	2
Tudor/PWWP/MBT	SET domain	2	2
Aldolase	Aldolase	2	2
HLH, helix-loop-helix DNA-binding domain	HLH, helix-loop-helix DNA-binding domain	2	2
(Trans)glycosidases	Protein kinase-like (PK-like)	2	2
GroEL apical domain-like	SAICAR synthase-like	2	1
Eukaryotic RPB5 N-terminal domain	RPB5-like RNA polymerase subunit	2	1
DNA repair protein MutS, domain II	DNA repair protein MutS, domain III	2	2
"Winged helix" DNA-binding domain	RNA-binding domain, RBD	2	2
RCC1/BLIP-II	Protein kinase-like (PK-like)	2	2
Ran binding protein zinc finger-like	Ran binding protein zinc finger-like	2	2
alpha-ketoacid dehydrogenase kinase, N-terminal domain	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	2	1
DNA repair protein MutS, domain II	P-loop containing nucleoside triphosphate hydrolases	2	2
vWA-like	SPOC domain-like	2	2
HAD-like	Glycerol-3-phosphate (1)-acyltransferase	2	1
WW domain	WW domain	2	2
PH domain-like	Oxysterol-binding protein-like	2	2
TATA-box binding protein-like	TATA-box binding protein-like	2	1
SPOC domain-like	C-terminal domain of Ku80	2	2
Acid proteases	Protein kinase-like (PK-like)	2	2
Kelch motif	Metallo-dependent phosphatases	2	2
Class I glutamine amidotransferase-like	Class I glutamine amidotransferase-like	2	1
Nucleotidyltransferase	PAP/Archaeal CCA-adding enzyme, C-terminal domain	2	1
R1 subunit of ribonucleotide reductase, N-terminal domain	PFL-like glycyl radical enzymes	2	2
GST C-terminal domain-like	Nucleotidylyl transferase	2	2
Ankyrin repeat	RNA-binding domain, RBD	2	2
ADP-ribosylation	Hemopexin-like domain	2	2
WWE domain	RING/U-box	2	2
PAZ domain	dsRNA-binding domain-like	2	2
PreATP-grasp domain	PreATP-grasp domain	2	2
Tudor/PWWP/MBT	P-loop containing nucleoside triphosphate hydrolases	2	2
DNA clamp	DNA clamp	2	2
RCC1/BLIP-II	RCC1/BLIP-II	2	2
Aminopeptidase/glucanase lid domain	Zn-dependent exopeptidases	2	1
Protein kinase-like (PK-like)	Skp1 dimerisation domain-like	2	2
GroEL equatorial domain-like	GroEL equatorial domain-like	2	2
WGR domain-like	ADP-ribosylation	2	2
Translational machinery components	Actin-crosslinking proteins	2	2
P-loop containing nucleoside triphosphate hydrolases	Glycosyl hydrolase domain	2	2
Zinc beta-ribbon	Cyclin-like	2	2
Cytochrome P450	Ribokinase-like	2	1
beta and beta-prime subunits of DNA dependent RNA-polymerase	Ubiquitin-like	2	1
6-phosphogluconate dehydrogenase C-terminal domain-like	6-phosphogluconate dehydrogenase C-terminal domain-like	2	1
Translation proteins	Initiation factor IF2/eIF5b, domain 3	2	2
Prokaryotic type KH domain (KH-domain type II)	Ribosomal protein S3 C-terminal domain	2	2
Ribokinase-like	Ribokinase-like	2	2
Flavoproteins	FMN-binding split barrel	2	1
Ribosomal protein L6	Ribosomal protein L6	2	2
TPR-like	RING/U-box	2	2
Glutathione synthetase ATP-binding domain-like	Succinyl-CoA synthetase domains	2	1
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	SIS domain	2	1
Chromo domain-like	S-adenosyl-L-methionine-dependent methyltransferases	2	2
(Trans)glycosidases	HSP40/DnaJ peptide-binding domain	2	2
FAD-linked reductases, C-terminal domain	FAD-linked reductases, C-terminal domain	2	1
E set domains	Ankyrin repeat	2	1
Class I glutamine amidotransferase-like	Adenine nucleotide alpha hydrolases-like	2	2
PreATP-grasp domain	Glutathione synthetase ATP-binding domain-like	2	2
P-loop containing nucleoside triphosphate hydrolases	C-terminal domain of alpha and beta subunits of F1 ATP synthase	2	2
Sec63 N-terminal domain-like	E set domains	2	2
MFS general substrate transporter	14-3-3 protein	2	1
ARM repeat	eIF4e-like	2	1
RING/U-box	Cysteine proteinases	2	2
CO dehydrogenase molybdoprotein N-domain-like	Molybdenum cofactor-binding domain	2	2
FAD/NAD(P)-binding domain	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain	2	1
Alpha subunit of glutamate synthase, C-terminal domain	Nucleotide-binding domain	2	2
Ferritin-like	Ferritin-like	2	2
L domain-like	EF-hand	2	2
alpha/beta-Hydrolases	Protein kinase-like (PK-like)	2	2
WD40 repeat-like	YVTN repeat-like/Quinoprotein amine dehydrogenase	2	1
Chaperone J-domain	DnaJ/Hsp40 cysteine-rich domain	2	2
alpha/beta-Hydrolases	P-loop containing nucleoside triphosphate hydrolases	2	2
POZ domain	TPR-like	2	2
Nitrite and sulphite reductase 4Fe-4S domain-like	Nitrite and sulphite reductase 4Fe-4S domain-like	2	1
Trm112p-like	Trm112p-like	2	2
Cyclophilin-like	Cyclophilin-like	2	2
DNase I-like	EF-hand	2	1
Cytochrome c	Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor	2	1
Chalcone isomerase	Protein kinase-like (PK-like)	2	2
PUA domain-like	Nucleotidylyl transferase	2	2
SET domain	RuBisCo LSMT C-terminal, substrate-binding domain	2	2
Nitrite/Sulfite reductase N-terminal domain-like	Nitrite/Sulfite reductase N-terminal domain-like	2	1
Translation proteins	Cytochrome b5-like heme/steroid binding domain	2	2
Cullin homology domain	Cullin homology domain	2	2
RNA-binding domain, RBD	WW domain	2	1
Cryptochrome/photolyase, N-terminal domain	Cryptochrome/photolyase FAD-binding domain	2	2
Staphylococcal nuclease	Staphylococcal nuclease	2	2
Phosphofructokinase	Phosphofructokinase	2	1
POZ domain	Pentapeptide repeat-like	2	1
Ribosomal protein S10	Tetrapyrrole methylase	2	2
GAF domain-like	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	2	2
UDP-Glycosyltransferase/glycogen phosphorylase	Protein kinase-like (PK-like)	2	2
Nucleotide-diphospho-sugar transferases	P-loop containing nucleoside triphosphate hydrolases	2	2
MurE/MurF N-terminal domain	MurD-like peptide ligases, catalytic domain	2	2
PFL-like glycyl radical enzymes	PFL-like glycyl radical enzymes	2	2
RNA-binding domain, RBD	DNA-binding domain	2	2
SNARE fusion complex	SNARE fusion complex	2	1
Protein kinase-like (PK-like)	TPR-like	2	2
CBS-domain pair	CAD & PB1 domains	2	2
NAD(P)-binding Rossmann-fold domains	Serine metabolism enzymes domain	2	2
Thioredoxin-like	eEF1-gamma domain	2	1
BRCT domain	Domain of poly(ADP-ribose) polymerase	2	2
PAH2 domain	PAH2 domain	2	1
Protein kinase-like (PK-like)	POZ domain	2	2
Ribosomal protein S5 domain 2-like	Ribonuclease PH domain 2-like	2	1
FMN-linked oxidoreductases	Nucleotide-binding domain	2	2
Periplasmic binding protein-like II	GlnB-like	2	1
DNA-binding domain	P-loop containing nucleoside triphosphate hydrolases	2	2
RNA-binding domain, RBD	RNI-like	2	2
Nucleic acid-binding proteins	Ubiquitin-like	2	2
WD40 repeat-like	Quinoprotein alcohol dehydrogenase-like	2	2
FAD/NAD(P)-binding domain	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain	2	1
2Fe-2S ferredoxin-like	alpha-helical ferredoxin	2	2
Chaperone J-domain	4Fe-4S ferredoxins	2	1
Chalcone isomerase	Chalcone isomerase	2	2
GST C-terminal domain-like	eEF1-gamma domain	2	1
Nucleic acid-binding proteins	Class II aaRS and biotin synthetases	2	2
Formate/glycerate dehydrogenase catalytic domain-like	Serine metabolism enzymes domain	2	2
Ran binding protein zinc finger-like	RNA-binding domain, RBD	2	2
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	N-terminal nucleophile aminohydrolases (Ntn hydrolases)	2	2
Protein kinase-like (PK-like)	KA1-like	2	2
Amine oxidase catalytic domain	Amine oxidase catalytic domain	2	1
POZ domain	Ankyrin repeat	2	2
E set domains	E set domains	2	2
FabD/lysophospholipase-like	FabD/lysophospholipase-like	2	2
Ankyrin repeat	Protein kinase-like (PK-like)	2	1
Beta-D-glucan exohydrolase, C-terminal domain	Beta-D-glucan exohydrolase, C-terminal domain	2	2
CCCH zinc finger	WD40 repeat-like	2	1
Fe-S cluster assembly (FSCA) domain-like	Fe-S cluster assembly (FSCA) domain-like	2	2
SAP domain	RNA-binding domain, RBD	2	1
Ankyrin repeat	RING/U-box	2	2
NAD(P)-binding Rossmann-fold domains	P-loop containing nucleoside triphosphate hydrolases	2	2
Protein kinase-like (PK-like)	GroES-like	2	2
(Trans)glycosidases	beta-Galactosidase/glucuronidase domain	2	2
Glutathione synthetase ATP-binding domain-like	Rudiment single hybrid motif	2	2
Calcium ATPase, transduction domain A	Calcium ATPase, transduction domain A	2	2
HIT-like	HIT-like	2	1
Quinoprotein alcohol dehydrogenase-like	Quinoprotein alcohol dehydrogenase-like	2	1
WGR domain-like	Domain of poly(ADP-ribose) polymerase	2	2
Zn-dependent exopeptidases	Zn-dependent exopeptidases	2	2
BRCT domain	ADP-ribosylation	2	2
ARM repeat	PH domain-like	2	2
WWE domain	ADP-ribosylation	2	1
Aconitase iron-sulfur domain	LeuD/IlvD-like	2	2
UBC-like	Endosomal sorting complex assembly domain	2	2
UDP-Glycosyltransferase/glycogen phosphorylase	NAD(P)-linked oxidoreductase	2	1
Retrovirus zinc finger-like domains	Eukaryotic type KH-domain (KH-domain type I)	2	2
Coiled-coil domain of nucleotide exchange factor GrpE	Head domain of nucleotide exchange factor GrpE	2	1
ClpP/crotonase	6-phosphogluconate dehydrogenase C-terminal domain-like	2	1
DNA repair protein MutS, domain I	P-loop containing nucleoside triphosphate hydrolases	2	2
FAD/NAD(P)-binding domain	Nucleotide-binding domain	2	2
Glutathione synthetase ATP-binding domain-like	Glutathione synthetase ATP-binding domain-like	2	2
AF0104/ALDC/Ptd012-like	AF0104/ALDC/Ptd012-like	2	1
WD40 repeat-like	Ribosomal protein S5 domain 2-like	2	2
N-terminal domain of alpha and beta subunits of F1 ATP synthase	C-terminal domain of alpha and beta subunits of F1 ATP synthase	2	2
Rad51 N-terminal domain-like	P-loop containing nucleoside triphosphate hydrolases	2	1
CCCH zinc finger	ARM repeat	2	1
Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	2	2
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain	2	1
RNA-binding domain, RBD	DPP6 N-terminal domain-like	2	2
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain	L domain-like	2	2
Protein kinase-like (PK-like)	WD40 repeat-like	2	2
Nucleotidylyl transferase	Ribosomal protein L25-like	2	2
TPR-like	Chaperone J-domain	2	2
HD-domain/PDEase-like	Nucleotidyltransferase	2	1
Trypsin-like serine proteases	Trypsin-like serine proteases	2	2
DHS-like NAD/FAD-binding domain	DHS-like NAD/FAD-binding domain	2	2
GST C-terminal domain-like	Ribosomal protein L25-like	2	2
Phosphoenolpyruvate/pyruvate domain	FKBP-like	2	2
Transducin (alpha subunit), insertion domain	P-loop containing nucleoside triphosphate hydrolases	2	2
P-loop containing nucleoside triphosphate hydrolases	Macro domain-like	1	1
PGBD-like	DnaJ/Hsp40 cysteine-rich domain	1	1
Formate/glycerate dehydrogenase catalytic domain-like	Homeodomain-like	1	1
Concanavalin A-like lectins/glucanases	Cysteine proteinases	1	1
SAM/Pointed domain	Metallo-hydrolase/oxidoreductase	1	1
L domain-like	RING/U-box	1	1
14-3-3 protein	14-3-3 protein	1	1
Glutathione synthetase ATP-binding domain-like	Phosphoenolpyruvate/pyruvate domain	1	1
Tudor/PWWP/MBT	DNA repair protein MutS, domain I	1	1
RNA-binding domain, RBD	NAC domain	1	1
P-loop containing nucleoside triphosphate hydrolases	RuvA domain 2-like	1	1
FAD-binding/transporter-associated domain-like	Molybdenum cofactor-binding domain	1	1
Protein kinase-like (PK-like)	Ribokinase-like	1	1
Ribonuclease H-like	Actin-like ATPase domain	1	1
L domain-like	Cysteine proteinases	1	1
DNase I-like	Ribonuclease H-like	1	1
DNase I-like	"Winged helix" DNA-binding domain	1	1
RING/U-box	MFS general substrate transporter	1	1
Cytochrome b5-like heme/steroid binding domain	Ferredoxin reductase-like, C-terminal NADP-linked domain	1	1
L domain-like	Chaperone J-domain	1	1
Ribonuclease PH domain 2-like	Eukaryotic type KH-domain (KH-domain type I)	1	1
Heat shock protein 70kD (HSP70), peptide-binding domain	Subtilisin-like	1	1
FAD-binding/transporter-associated domain-like	Protein kinase-like (PK-like)	1	1
ARID-like	FYVE/PHD zinc finger	1	1
Ribonuclease H-like	Acid proteases	1	1
Ribonuclease H-like	PP2C-like	1	1
"Winged helix" DNA-binding domain	E set domains	1	1
Cupredoxins	Phosphoglucomutase, C-terminal domain	1	1
(Trans)glycosidases	Actin-like ATPase domain	1	1
PA domain	PA domain	1	1
Chaperone J-domain	HSC20 (HSCB), C-terminal oligomerisation domain	1	1
UBC-like	Chaperone J-domain	1	1
Actin-like ATPase domain	FF domain	1	1
Globin-like	Acetyl-CoA synthetase-like	1	1
Calponin-homology domain, CH-domain	LysM domain	1	1
Sm-like ribonucleoproteins	Retrovirus zinc finger-like domains	1	1
2Fe-2S ferredoxin-like	4Fe-4S ferredoxins	1	1
Tropomyosin	Tropomyosin	1	1
FAD-linked oxidases, C-terminal domain	PLP-dependent transferases	1	1
Leukotriene A4 hydrolase N-terminal domain	PHL pollen allergen	1	1
Ankyrin repeat	L domain-like	1	1
Class I glutamine amidotransferase-like	GMP synthetase C-terminal dimerisation domain	1	1
PIN domain-like	5' to 3' exonuclease, C-terminal subdomain	1	1
Calponin-homology domain, CH-domain	Multidrug resistance efflux transporter EmrE	1	1
alpha/beta-Hydrolases	Heme-dependent peroxidases	1	1
Toll/Interleukin receptor TIR domain	Protein kinase-like (PK-like)	1	1
Oxysterol-binding protein-like	Oxysterol-binding protein-like	1	1
L30e-like	alpha/beta knot	1	1
DNA-binding domain	Cytochrome P450	1	1
ValRS/IleRS/LeuRS editing domain	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	1	1
Families 57/38 glycoside transferase middle domain	Galactose mutarotase-like	1	1
beta-beta-alpha zinc fingers	SET domain	1	1
FF domain	FF domain	1	1
FAD-binding/transporter-associated domain-like	Six-hairpin glycosidases	1	1
BEACH domain	ARM repeat	1	1
PRTase-like	Acid proteases	1	1
Cytidine deaminase-like	Dihydrofolate reductase-like	1	1
WD40 repeat-like	HSP90 C-terminal domain	1	1
FAD-binding/transporter-associated domain-like	PLP-dependent transferases	1	1
Alpha subunit of glutamate synthase, C-terminal domain	Alpha subunit of glutamate synthase, C-terminal domain	1	1
Tudor/PWWP/MBT	DNA repair protein MutS, domain II	1	1
HAD-like	Riboflavin kinase-like	1	1
Concanavalin A-like lectins/glucanases	NTF2-like	1	1
L domain-like	Ribonuclease H-like	1	1
Flavoproteins	Ferredoxin reductase-like, C-terminal NADP-linked domain	1	1
P-loop containing nucleoside triphosphate hydrolases	GIY-YIG endonuclease	1	1
Lipocalins	Lipocalins	1	1
RING/U-box	Histone-fold	1	1
ARM repeat	Tudor/PWWP/MBT	1	1
PH domain-like	ArfGap/RecO-like zinc finger	1	1
Ankyrin repeat	CCCH zinc finger	1	1
CO dehydrogenase ISP C-domain like	Molybdenum cofactor-binding domain	1	1
Putative DNA-binding domain	PheT/TilS domain	1	1
6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK	6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK	1	1
L domain-like	GroES-like	1	1
Protein kinase-like (PK-like)	BEACH domain	1	1
RmlC-like cupins	Protein kinase-like (PK-like)	1	1
(Trans)glycosidases	Nucleotidylyl transferase	1	1
Retrovirus zinc finger-like domains	DNase I-like	1	1
NAD-binding domain of HMG-CoA reductase	P-loop containing nucleoside triphosphate hydrolases	1	1
(Phosphotyrosine protein) phosphatases II	PP2C-like	1	1
Mitochondrial carrier	Protein kinase-like (PK-like)	1	1
all-alpha NTP pyrophosphatases	all-alpha NTP pyrophosphatases	1	1
Dimeric alpha+beta barrel	Dimeric alpha+beta barrel	1	1
P-loop containing nucleoside triphosphate hydrolases	HAND domain of the nucleosome remodeling ATPase ISWI	1	1
HCP-like	Thioredoxin-like	1	1
(Phosphotyrosine protein) phosphatases II	SMAD/FHA domain	1	1
YrdC/RibB	RibA-like	1	1
MFS general substrate transporter	S-adenosyl-L-methionine-dependent methyltransferases	1	1
P-loop containing nucleoside triphosphate hydrolases	Ribosomal protein S7	1	1
Chromo domain-like	Acyl-CoA N-acyltransferases (Nat)	1	1
Mitochondrial carrier	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	1	1
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	Alpha subunit of glutamate synthase, C-terminal domain	1	1
alpha/beta-Hydrolases	D-ribose-5-phosphate isomerase (RpiA), lid domain	1	1
Nucleic acid-binding proteins	Retrovirus zinc finger-like domains	1	1
FAD/NAD(P)-binding domain	Cyclin-like	1	1
Osmotin, thaumatin-like protein	(Trans)glycosidases	1	1
DNA-binding domain	PHL pollen allergen	1	1
FYVE/PHD zinc finger	PUA domain-like	1	1
AN1-like Zinc finger	Cytochrome P450	1	1
ARM repeat	Clavaminate synthase-like	1	1
Alpha subunit of glutamate synthase, C-terminal domain	alpha-helical ferredoxin	1	1
Protein kinase-like (PK-like)	DNA-binding domain	1	1
Thioredoxin-like	Histone-fold	1	1
PH domain-like	Bet v1-like	1	1
RNA-binding domain, RBD	Ubiquitin-like	1	1
Retrovirus zinc finger-like domains	Ribonuclease H-like	1	1
Indolic compounds 2,3-dioxygenase-like	Indolic compounds 2,3-dioxygenase-like	1	1
RNA-binding domain, RBD	NAD(P)-binding Rossmann-fold domains	1	1
Starch-binding domain-like	Galactose-binding domain-like	1	1
Phosphoenolpyruvate/pyruvate domain	DNA ligase/mRNA capping enzyme, catalytic domain	1	1
Mitochondrial carrier	Concanavalin A-like lectins/glucanases	1	1
TAZ domain	RING/U-box	1	1
Cysteine proteinases	UBA-like	1	1
PYP-like sensor domain (PAS domain)	Protein kinase-like (PK-like)	1	1
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	1	1
GroES-like	Galactose oxidase, central domain	1	1
P-loop containing nucleoside triphosphate hydrolases	PLP-dependent transferases	1	1
dsRNA-binding domain-like	S-adenosyl-L-methionine-dependent methyltransferases	1	1
SET domain	S-adenosyl-L-methionine-dependent methyltransferases	1	1
Nucleotidyltransferase	Seven-hairpin glycosidases	1	1
PreATP-grasp domain	Rudiment single hybrid motif	1	1
ARM repeat	Clathrin adaptor appendage domain	1	1
CorA soluble domain-like	Magnesium transport protein CorA, transmembrane region	1	1
UBA-like	P-loop containing nucleoside triphosphate hydrolases	1	1
2Fe-2S ferredoxin-like	CO dehydrogenase flavoprotein C-terminal domain-like	1	1
PP2C-like	PHL pollen allergen	1	1
Subtilisin-like	Heat shock protein 70kD (HSP70), C-terminal subdomain	1	1
HD-domain/PDEase-like	HD-domain/PDEase-like	1	1
Carbamoyl phosphate synthetase, small subunit N-terminal domain	Class I glutamine amidotransferase-like	1	1
DPP6 N-terminal domain-like	alpha/beta-Hydrolases	1	1
Dom34/Pelota N-terminal domain-like	Translational machinery components	1	1
POZ domain	TAZ domain	1	1
Six-hairpin glycosidases	(Trans)glycosidases	1	1
2Fe-2S ferredoxin-like	Molybdenum cofactor-binding domain	1	1
RNase III domain-like	Ribosomal protein S10	1	1
Heme-dependent peroxidases	P-loop containing nucleoside triphosphate hydrolases	1	1
NSFL1 (p97 ATPase) cofactor p47, SEP domain	Ubiquitin-like	1	1
DNA-binding pseudobarrel domain	Protein kinase-like (PK-like)	1	1
Hairpin loop containing domain-like	WRKY DNA-binding domain	1	1
alpha/beta-Hydrolases	N-terminal nucleophile aminohydrolases (Ntn hydrolases)	1	1
Aquaporin-like	P-loop containing nucleoside triphosphate hydrolases	1	1
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	Quinoprotein alcohol dehydrogenase-like	1	1
RNI-like	Trypsin-like serine proteases	1	1
Undecaprenyl diphosphate synthase	Undecaprenyl diphosphate synthase	1	1
Cupredoxins	Phosphoglucomutase, first 3 domains	1	1
ThrRS/AlaRS common domain	Class II aaRS and biotin synthetases	1	1
Ribokinase-like	Thiamin phosphate synthase	1	1
PLP-binding barrel	At5g01610-like	1	1
Protein kinase-like (PK-like)	HydA/Nqo6-like	1	1
TPR-like	Thioredoxin-like	1	1
FAD/NAD(P)-binding domain	Nop domain	1	1
P-loop containing nucleoside triphosphate hydrolases	Bromodomain	1	1
Tex N-terminal region-like	Nucleic acid-binding proteins	1	1
Glutathione synthetase ATP-binding domain-like	Phosphohistidine domain	1	1
At5g01610-like	At5g01610-like	1	1
EF-hand	Mitochondrial carrier	1	1
RNI-like	NAD-binding domain of HMG-CoA reductase	1	1
Thiamin pyrophosphokinase, catalytic domain	Thiamin pyrophosphokinase, substrate-binding domain	1	1
FAD-binding/transporter-associated domain-like	Cupredoxins	1	1
PH domain-like	"Winged helix" DNA-binding domain	1	1
Rhomboid-like	UDP-Glycosyltransferase/glycogen phosphorylase	1	1
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain	(Trans)glycosidases	1	1
Nucleic acid-binding proteins	RBP11-like subunits of RNA polymerase	1	1
GroEL apical domain-like	Galactose mutarotase-like	1	1
P-loop containing nucleoside triphosphate hydrolases	PAZ domain	1	1
Ligand-binding domain in the NO signalling and Golgi transport	Ligand-binding domain in the NO signalling and Golgi transport	1	1
Class II aaRS and biotin synthetases	Anticodon-binding domain of PheRS	1	1
Cytochrome P450	Kelch motif	1	1
Chromo domain-like	ARM repeat	1	1
vWA-like	Cysteine-rich domain	1	1
Domain of the SRP/SRP receptor G-proteins	Domain of the SRP/SRP receptor G-proteins	1	1
P-loop containing nucleoside triphosphate hydrolases	AN1-like Zinc finger	1	1
ARM repeat	Phospholipase D/nuclease	1	1
Tricorn protease N-terminal domain	Tricorn protease N-terminal domain	1	1
PP2C-like	Nucleic acid-binding proteins	1	1
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain	Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain	1	1
DNA-binding domain	Tubulin nucleotide-binding domain-like	1	1
Urease, gamma-subunit	Urease, beta-subunit	1	1
Glutamyl tRNA-reductase catalytic, N-terminal domain	NAD(P)-binding Rossmann-fold domains	1	1
RNI-like	Ribonuclease H-like	1	1
RNI-like	14-3-3 protein	1	1
FMN-linked oxidoreductases	alpha-helical ferredoxin	1	1
Chromo domain-like	Ankyrin repeat	1	1
Ribosomal protein L19 (L19e)	Ribosomal protein L19 (L19e)	1	1
Formiminotransferase domain of formiminotransferase-cyclodeaminase.	Formiminotransferase domain of formiminotransferase-cyclodeaminase.	1	1
P-loop containing nucleoside triphosphate hydrolases	Hypothetical protein YjiA, C-terminal domain	1	1
PIN domain-like	Nucleic acid-binding proteins	1	1
SAP domain	Phosphoenolpyruvate/pyruvate domain	1	1
P-loop containing nucleoside triphosphate hydrolases	DNA/RNA polymerases	1	1
alpha/beta-Hydrolases	Cytochrome P450	1	1
F-box domain	Tricorn protease N-terminal domain	1	1
Cysteine proteinases	Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment	1	1
ARM repeat	"Winged helix" DNA-binding domain	1	1
DNA breaking-rejoining enzymes	Trypsin-like serine proteases	1	1
Cyclophilin-like	Ribosomal protein S5 domain 2-like	1	1
Arginase/deacetylase	Arginase/deacetylase	1	1
Cytochrome P450	Nucleotide-diphospho-sugar transferases	1	1
PH domain-like	BEACH domain	1	1
Bet v1-like	PYP-like sensor domain (PAS domain)	1	1
Barwin-like endoglucanases	TPR-like	1	1
Ribosomal protein L7/12, oligomerisation (N-terminal) domain	ClpS-like	1	1
Actin depolymerizing proteins	Actin-like ATPase domain	1	1
RNA polymerase subunits	RING/U-box	1	1
CO dehydrogenase ISP C-domain like	CO dehydrogenase molybdoprotein N-domain-like	1	1
Multidrug efflux transporter AcrB transmembrane domain	Multidrug efflux transporter AcrB transmembrane domain	1	1
Class II aaRS and biotin synthetases	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)	1	1
UBC-like	Mago nashi protein	1	1
beta and beta-prime subunits of DNA dependent RNA-polymerase	Skp1 dimerisation domain-like	1	1
Cysteine proteinases	Formin homology 2 domain (FH2 domain)	1	1
PAP/OAS1 substrate-binding domain	PAP/OAS1 substrate-binding domain	1	1
SufE/NifU	SufE/NifU	1	1
RuvA domain 2-like	RuvA domain 2-like	1	1
Chalcone isomerase	ATP-dependent DNA ligase DNA-binding domain	1	1
ENTH/VHS domain	S-adenosyl-L-methionine-dependent methyltransferases	1	1
CO dehydrogenase ISP C-domain like	FAD-binding/transporter-associated domain-like	1	1
beta-sandwich domain of Sec23/24	beta-sandwich domain of Sec23/24	1	1
Nudix	Ribonuclease H-like	1	1
Bacterial hemolysins	RING/U-box	1	1
Cysteine proteinases	Protein kinase-like (PK-like)	1	1
WD40 repeat-like	Barwin-like endoglucanases	1	1
PUG domain-like	Ubiquitin-like	1	1
Phosphoenolpyruvate/pyruvate domain	RING/U-box	1	1
TPR-like	Metallo-dependent phosphatases	1	1
FKBP-like	S-adenosyl-L-methionine-dependent methyltransferases	1	1
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	PRTase-like	1	1
FAD/NAD(P)-binding domain	RING/U-box	1	1
Carbamoyl phosphate synthetase, large subunit connection domain	Methylglyoxal synthase-like	1	1
ISY1 domain-like	UDP-Glycosyltransferase/glycogen phosphorylase	1	1
NAC domain	NAD-binding domain of HMG-CoA reductase	1	1
Molybdenum cofactor biosynthesis proteins	MoeA C-terminal domain-like	1	1
RNA-binding domain, RBD	Heme-dependent peroxidases	1	1
PH domain-like	Formin homology 2 domain (FH2 domain)	1	1
HAD-like	L-aspartase-like	1	1
F-box domain	L domain-like	1	1
HAD-like	NTF2-like	1	1
Protein kinase-like (PK-like)	(Phosphotyrosine protein) phosphatases II	1	1
PDZ domain-like	Rubredoxin-like	1	1
Ribonuclease H-like	Nucleic acid-binding proteins	1	1
Ankyrin repeat	RCC1/BLIP-II	1	1
(Trans)glycosidases	POZ domain	1	1
Thioredoxin-like	Six-hairpin glycosidases	1	1
Acyl-CoA binding protein	Ankyrin repeat	1	1
Substrate-binding domain of HMG-CoA reductase	Toll/Interleukin receptor TIR domain	1	1
NagB/RpiA/CoA transferase-like	NagB/RpiA/CoA transferase-like	1	1
Probable bacterial effector-binding domain	Probable bacterial effector-binding domain	1	1
PYP-like sensor domain (PAS domain)	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	1	1
ABC transporter transmembrane region	Protein kinase-like (PK-like)	1	1
Cullin repeat-like	Tubulin C-terminal domain-like	1	1
Tubulin nucleotide-binding domain-like	Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain	1	1
Acetyl-CoA synthetase-like	Protein kinase-like (PK-like)	1	1
P-loop containing nucleoside triphosphate hydrolases	RNase III domain-like	1	1
Nucleotidylyl transferase	An anticodon-binding domain of class I aminoacyl-tRNA synthetases	1	1
Glutathione synthetase ATP-binding domain-like	Methylglyoxal synthase-like	1	1
L30e-like	L30e-like	1	1
RING/U-box	BRCT domain	1	1
ThrRS/AlaRS common domain	Class II aaRS ABD-related	1	1
Translational machinery components	Translational machinery components	1	1
Quinoprotein alcohol dehydrogenase-like	Putative isomerase YbhE	1	1
NAD(P)-binding Rossmann-fold domains	Glutamyl tRNA-reductase dimerization domain	1	1
NAD(P)-binding Rossmann-fold domains	Citrate synthase	1	1
Concanavalin A-like lectins/glucanases	WD40 repeat-like	1	1
Ribosomal protein L22	Ribosomal protein L22	1	1
RNI-like	Ankyrin repeat	1	1
TPR-like	CRAL/TRIO domain	1	1
2Fe-2S ferredoxin-like	FAD-binding/transporter-associated domain-like	1	1
TGS-like	Class II aaRS and biotin synthetases	1	1
Adenine nucleotide alpha hydrolases-like	Thioredoxin-like	1	1
Acyl-CoA dehydrogenase NM domain-like	Acyl-CoA dehydrogenase NM domain-like	1	1
Cu,Zn superoxide dismutase-like	Cu,Zn superoxide dismutase-like	1	1
F-box domain	Quinoprotein alcohol dehydrogenase-like	1	1
Protein kinase-like (PK-like)	Translational machinery components	1	1
Photosystem I subunits PsaA/PsaB	Photosystem I subunits PsaA/PsaB	1	1
UDP-Glycosyltransferase/glycogen phosphorylase	NAD(P)-binding Rossmann-fold domains	1	1
ClpP/crotonase	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	1	1
FYVE/PHD zinc finger	Ribonuclease H-like	1	1
Epsilon subunit of mitochondrial F1F0-ATP synthase	Epsilon subunit of mitochondrial F1F0-ATP synthase	1	1
Sigma2 domain of RNA polymerase sigma factors	Sigma3 and sigma4 domains of RNA polymerase sigma factors	1	1
Protein prenylyltransferase	Thioesterase/thiol ester dehydrase-isomerase	1	1
Chaperone J-domain	CSL zinc finger	1	1
Cullin repeat-like	ARM repeat	1	1
CAD & PB1 domains	UBA-like	1	1
WW domain	FF domain	1	1
C2 domain (Calcium/lipid-binding domain, CaLB)	MFS general substrate transporter	1	1
Pectin lyase-like	FAD-binding/transporter-associated domain-like	1	1
Aldolase	Aminoacid dehydrogenase-like, N-terminal domain	1	1
POZ domain	Quinoprotein alcohol dehydrogenase-like	1	1
ISP transmembrane anchor	ISP domain	1	1
Lipoxigenase	P-loop containing nucleoside triphosphate hydrolases	1	1
FAS1 domain	NAD(P)-binding Rossmann-fold domains	1	1
Creatinase/prolidase N-terminal domain	Creatinase/prolidase N-terminal domain	1	1
ARM repeat	alpha/beta-Hydrolases	1	1
Periplasmic binding protein-like I	Nucleotide-diphospho-sugar transferases	1	1
beta-Galactosidase/glucuronidase domain	Galactose mutarotase-like	1	1
ARM repeat	Subdomain of clathrin and coatomer appendage domain	1	1
RuvA domain 2-like	Nucleic acid-binding proteins	1	1
P-loop containing nucleoside triphosphate hydrolases	Class I glutamine amidotransferase-like	1	1
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	Mannose-binding lectins	1	1
BAR/IMD domain-like	Cullin homology domain	1	1
SAP domain	DNA ligase/mRNA capping enzyme, catalytic domain	1	1
Thiolase-like	Plant invertase/pectin methylesterase inhibitor	1	1
UBA-like	Protein kinase-like (PK-like)	1	1
Ribulose-phoshate binding barrel	Ribulose-phoshate binding barrel	1	1
Amidase signature (AS) enzymes	P-loop containing nucleoside triphosphate hydrolases	1	1
Clavaminate synthase-like	beta-beta-alpha zinc fingers	1	1
Trimeric LpxA-like enzymes	GHMP Kinase, C-terminal domain	1	1
F-box domain	NHL repeat	1	1
(Trans)glycosidases	PUA domain-like	1	1
ARM repeat	TPR-like	1	1
RING/U-box	Homeodomain-like	1	1
Glycoside hydrolase/deacetylase	Families 57/38 glycoside transferase middle domain	1	1
P-loop containing nucleoside triphosphate hydrolases	Terpenoid cyclases/Protein prenyltransferases	1	1
4Fe-4S ferredoxins	P-loop containing nucleoside triphosphate hydrolases	1	1
HMA, heavy metal-associated domain	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain	1	1
ARM repeat	UBA-like	1	1
HCP-like	P-loop containing nucleoside triphosphate hydrolases	1	1
Tudor/PWWP/MBT	Chromo domain-like	1	1
Adenine nucleotide alpha hydrolases-like	Molybdenum cofactor biosynthesis proteins	1	1
Histone-fold	Ubiquitin-like	1	1
ARM repeat	EF-hand	1	1
ARID-like	Clavaminate synthase-like	1	1
Acid phosphatase/Vanadium-dependent haloperoxidase	Acid phosphatase/Vanadium-dependent haloperoxidase	1	1
F-box domain	LigB-like	1	1
WW domain	P-loop containing nucleoside triphosphate hydrolases	1	1
Ubiquitin-like	Hect, E3 ligase catalytic domain	1	1
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain	1	1
Histone-fold	P-loop containing nucleoside triphosphate hydrolases	1	1
UBC-like	UBA-like	1	1
Ribosomal protein S2	F1F0 ATP synthase subunit A	1	1
Chaperone J-domain	RNA-binding domain, RBD	1	1
Phosphoenolpyruvate/pyruvate domain	Nucleic acid-binding proteins	1	1
beta-Galactosidase/glucuronidase domain	beta-Galactosidase/glucuronidase domain	1	1
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)	Translation proteins	1	1
Glutathione synthetase ATP-binding domain-like	Carbamoyl phosphate synthetase, large subunit connection domain	1	1
Chelatase	Chlorophyll a-b binding protein	1	1
Protein kinase-like (PK-like)	Ribonuclease H-like	1	1
Cytochrome P450	Thioredoxin-like	1	1
Histone-fold	ARM repeat	1	1
eEF-1beta-like	eEF-1beta-like	1	1
eIF2alpha middle domain-like	eIF-2-alpha, C-terminal domain	1	1
alpha-D-mannose-specific plant lectins	Type II DNA topoisomerase	1	1
Tex N-terminal region-like	RuvA domain 2-like	1	1
WRKY DNA-binding domain	Protein kinase-like (PK-like)	1	1
RNA-binding domain, RBD	beta-sandwich domain of Sec23/24	1	1
Histone-fold	L domain-like	1	1
E set domains	Cytochrome b5-like heme/steroid binding domain	1	1
BAR/IMD domain-like	PH domain-like	1	1
UBC-like	Cyclin-like	1	1
NTF2-like	Oxysterol-binding protein-like	1	1
FAD-binding/transporter-associated domain-like	CO dehydrogenase flavoprotein C-terminal domain-like	1	1
Clathrin heavy-chain terminal domain	ARM repeat	1	1
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain	1	1
Adenine nucleotide alpha hydrolases-like	L30e-like	1	1
TGS-like	Class II aaRS ABD-related	1	1
Oxidoreductase molybdopterin-binding domain	Ferredoxin reductase-like, C-terminal NADP-linked domain	1	1
Calcium ATPase, transmembrane domain M	Calcium ATPase, transmembrane domain M	1	1
ARM repeat	Concanavalin A-like lectins/glucanases	1	1
Rhodanese/Cell cycle control phosphatase	SMAD/FHA domain	1	1
Protein kinase-like (PK-like)	HAD-like	1	1
Methionyl-tRNA synthetase (MetRS), Zn-domain	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	1	1
SNARE-like	Domain of the SRP/SRP receptor G-proteins	1	1
Thioredoxin-like	MFS general substrate transporter	1	1
Agglutinin	Aerolisin/ETX pore-forming domain	1	1
DNA-binding domain	Calcium ATPase, transmembrane domain M	1	1
P-loop containing nucleoside triphosphate hydrolases	Pectin lyase-like	1	1
Enolase C-terminal domain-like	alpha/beta-Hydrolases	1	1
Myosin rod fragments	Tropomyosin	1	1
Endosomal sorting complex assembly domain	VPS28 C-terminal domain-like	1	1
Thioredoxin-like	Aquaporin-like	1	1
Phospholipase C/P1 nuclease	Phospholipase C/P1 nuclease	1	1
Periplasmic binding protein-like II	Nucleotide-diphospho-sugar transferases	1	1
Zinc hairpin stack	Zinc hairpin stack	1	1
Nucleic acid-binding proteins	eIF-2-alpha, C-terminal domain	1	1
(Trans)glycosidases	HMG-box	1	1
Glutamyl tRNA-reductase catalytic, N-terminal domain	Glutamyl tRNA-reductase dimerization domain	1	1
CAD & PB1 domains	RING/U-box	1	1
Transferrin receptor-like dimerisation domain	Transferrin receptor-like dimerisation domain	1	1
Actin-like ATPase domain	Trypsin-like serine proteases	1	1
FAD-linked oxidoreductase	FAD-linked oxidoreductase	1	1
Carbamate kinase-like	ACT-like	1	1
E set domains	AMPKBI-like	1	1
Casein kinase II beta subunit	Casein kinase II beta subunit	1	1
Homeodomain-like	PYP-like sensor domain (PAS domain)	1	1
Ricin B-like lectins	Glycosyl hydrolase domain	1	1
Cytochrome P450	SGNH hydrolase	1	1
Tudor/PWWP/MBT	DNA repair protein MutS, domain III	1	1
DNase I-like	L domain-like	1	1
GroES-like	E set domains	1	1
Adenine nucleotide alpha hydrolases-like	MesJ substrate recognition domain-like	1	1
Nucleoside hydrolase	Nucleoside hydrolase	1	1
Protein kinase-like (PK-like)	Pectin lyase-like	1	1
ArfGap/RecO-like zinc finger	C2 domain (Calcium/lipid-binding domain, CaLB)	1	1
EreA/ChaN-like	ACT-like	1	1
Surp module (SWAP domain)	ENTH/VHS domain	1	1
Adenine nucleotide alpha hydrolases-like	Translational machinery components	1	1
PurM N-terminal domain-like	PurM C-terminal domain-like	1	1
FMN-linked oxidoreductases	Clavaminate synthase-like	1	1
P-loop containing nucleoside triphosphate hydrolases	Sec63 N-terminal domain-like	1	1
Argininosuccinate synthetase, C-terminal domain	Adenine nucleotide alpha hydrolases-like	1	1
Oxidoreductase molybdopterin-binding domain	E set domains	1	1
Mitochondrial carrier	MFS general substrate transporter	1	1
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain	SAICAR synthase-like	1	1
Helical domain of Sec23/24	Helical domain of Sec23/24	1	1
Adenine nucleotide alpha hydrolases-like	GMP synthetase C-terminal dimerisation domain	1	1
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1	Adenine nucleotide alpha hydrolases-like	1	1
Creatinase/aminopeptidase	NAD(P)-binding Rossmann-fold domains	1	1
Domain of the SRP/SRP receptor G-proteins	Signal peptide-binding domain	1	1
SNARE-like	P-loop containing nucleoside triphosphate hydrolases	1	1
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)	ThrRS/AlaRS common domain	1	1
Bacterial photosystem II reaction centre, L and M subunits	Photosystem II antenna protein-like	1	1
Thioredoxin-like	Ubiquitin-like	1	1
Outer arm dynein light chain 1	RNI-like	1	1
P-loop containing nucleoside triphosphate hydrolases	ARID-like	1	1
EF-hand	FMN-linked oxidoreductases	1	1
SBT domain	SBT domain	1	1
Protein kinase-like (PK-like)	Carbonic anhydrase	1	1
Oxidoreductase molybdopterin-binding domain	Riboflavin synthase domain-like	1	1
P-loop containing nucleoside triphosphate hydrolases	Amine oxidase catalytic domain	1	1
2Fe-2S ferredoxin-like	CO dehydrogenase molybdoprotein N-domain-like	1	1
Quinoprotein alcohol dehydrogenase-like	Tricorn protease domain 2	1	1
ACT-like	UDP-Glycosyltransferase/glycogen phosphorylase	1	1
L30e-like	Actin-crosslinking proteins	1	1
Class I glutamine amidotransferase-like	PP2C-like	1	1
Macro domain-like	Macro domain-like	1	1
Class II aaRS ABD-related	C-terminal domain of ProRS	1	1
PLP-dependent transferases	PIN domain-like	1	1
Ribosomal protein S19	P-loop containing nucleoside triphosphate hydrolases	1	1
Rhomboid-like	Rhomboid-like	1	1
Heme oxygenase-like	HAD-like	1	1
FYSH domain	Hypothetical protein AF0491, middle domain	1	1
PreATP-grasp domain	Carbamoyl phosphate synthetase, large subunit connection domain	1	1
S-adenosyl-L-methionine-dependent methyltransferases	FMN-linked oxidoreductases	1	1
FAD-binding/transporter-associated domain-like	Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain	1	1
beta-sandwich domain of Sec23/24	Acid proteases	1	1
Argininosuccinate synthetase, C-terminal domain	Argininosuccinate synthetase, C-terminal domain	1	1
Saposin	Protein kinase-like (PK-like)	1	1
Ammonium transporter	Ammonium transporter	1	1
alpha/beta-Hydrolases	L domain-like	1	1
beta-N-acetylhexosaminidase-like domain	(Trans)glycosidases	1	1
ARM repeat	NAD(P)-binding Rossmann-fold domains	1	1
PH domain-like	(Phosphotyrosine protein) phosphatases II	1	1
ISP domain	Chlorophyll a-b binding protein	1	1
P-loop containing nucleoside triphosphate hydrolases	Homeodomain-like	1	1
FAD-linked oxidases, C-terminal domain	FAD-linked oxidases, C-terminal domain	1	1
S-adenosyl-L-methionine-dependent methyltransferases	C2 domain (Calcium/lipid-binding domain, CaLB)	1	1
Acyl-CoA N-acyltransferases (Nat)	BRCT domain	1	1
Concanavalin A-like lectins/glucanases	P-loop containing nucleoside triphosphate hydrolases	1	1
CO dehydrogenase flavoprotein C-terminal domain-like	CO dehydrogenase molybdoprotein N-domain-like	1	1
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1	Cupredoxins	1	1
Ribonuclease H-like	RING/U-box	1	1
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	Nucleotide-binding domain	1	1
BAR/IMD domain-like	BAR/IMD domain-like	1	1
Protein kinase-like (PK-like)	Globin-like	1	1
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	(Trans)glycosidases	1	1
DNase I-like	Cytochrome P450	1	1
HAND domain of the nucleosome remodeling ATPase ISWI	Homeodomain-like	1	1
PH domain-like	RCC1/BLIP-II	1	1
Seven-hairpin glycosidases	Seven-hairpin glycosidases	1	1
Hypothetical protein AF0491, middle domain	beta-beta-alpha zinc fingers	1	1
Translation proteins	ThrRS/AlaRS common domain	1	1
Trimeric LpxA-like enzymes	Ribosomal protein S5 domain 2-like	1	1
Calcium ATPase, transmembrane domain M	DNA-binding pseudobarrel domain	1	1
P-loop containing nucleoside triphosphate hydrolases	Ricin B-like lectins	1	1
SAP domain	Nucleic acid-binding proteins	1	1
L domain-like	NAD-binding domain of HMG-CoA reductase	1	1
Oxygen-evolving enhancer protein 3,	Cyclophilin-like	1	1
L-aspartase-like	Class II aaRS and biotin synthetases	1	1
UBA-like	NSFL1 (p97 ATPase) cofactor p47, SEP domain	1	1
FAD/NAD(P)-binding domain	ARM repeat	1	1
Tricorn protease domain 2	WD40 repeat-like	1	1
Putative DNA-binding domain	Class II aaRS and biotin synthetases	1	1
Substrate-binding domain of HMG-CoA reductase	P-loop containing nucleoside triphosphate hydrolases	1	1
NAD(P)-binding Rossmann-fold domains	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain	1	1
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	Nucleic acid-binding proteins	1	1
Thioredoxin-like	"Winged helix" DNA-binding domain	1	1
FAD/NAD(P)-binding domain	NAD(P)-binding Rossmann-fold domains	1	1
L domain-like	Substrate-binding domain of HMG-CoA reductase	1	1
DNA-binding domain	Cupredoxins	1	1
BAR/IMD domain-like	ArfGap/RecO-like zinc finger	1	1
Nucleic acid-binding proteins	"Winged helix" DNA-binding domain	1	1
Cysteine proteinases	PRTase-like	1	1
EF-hand	Calponin-homology domain, CH-domain	1	1
FAD-binding/transporter-associated domain-like	Subtilisin-like	1	1
Isocitrate/Isopropylmalate dehydrogenase-like	Protein kinase-like (PK-like)	1	1
GroEL-intermediate domain like	GroEL-intermediate domain like	1	1
"Winged helix" DNA-binding domain	Sec63 N-terminal domain-like	1	1
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	L domain-like	1	1
UBA-like	Hect, E3 ligase catalytic domain	1	1
tRNA-binding arm	Class II aaRS and biotin synthetases	1	1
PA domain	Growth factor receptor domain	1	1
Nucleotidylyl transferase	Nucleotidylyl transferase	1	1
At5g01610-like	Formate dehydrogenase/DMSO reductase, domains 1-3	1	1
Metallo-dependent phosphatases	N-terminal nucleophile aminohydrolases (Ntn hydrolases)	1	1
Toll/Interleukin receptor TIR domain	HSP20-like chaperones	1	1
ISP domain	Bet v1-like	1	1
Cysteine proteinases	DNA breaking-rejoining enzymes	1	1
RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase	1	1
ENTH/VHS domain	P-loop containing nucleoside triphosphate hydrolases	1	1
Retrovirus zinc finger-like domains	RCC1/BLIP-II	1	1
MoeA N-terminal region -like	MoeA N-terminal region -like	1	1
HAD-like	alpha/beta-Hydrolases	1	1
HMA, heavy metal-associated domain	PLP-dependent transferases	1	1
FYVE/PHD zinc finger	ARM repeat	1	1
Nucleotidyltransferase	Poly A polymerase C-terminal region-like	1	1
Ribosomal protein S5 domain 2-like	(Trans)glycosidases	1	1
P-loop containing nucleoside triphosphate hydrolases	Cullin repeat-like	1	1
RNA-binding domain, RBD	Phospholipase D/nuclease	1	1
LEA14-like	LEA14-like	1	1
Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e	1	1
PP2C-like	Trypsin-like serine proteases	1	1
C2 domain (Calcium/lipid-binding domain, CaLB)	vWA-like	1	1
Sec7 domain	P-loop containing nucleoside triphosphate hydrolases	1	1
Cryptochrome/photolyase, N-terminal domain	Cryptochrome/photolyase, N-terminal domain	1	1
Protein kinase-like (PK-like)	NAD(P)-binding Rossmann-fold domains	1	1
FAD/NAD(P)-binding domain	Smc hinge domain	1	1
Acid proteases	Glutamine synthetase/guanido kinase	1	1
Kelch motif	P-loop containing nucleoside triphosphate hydrolases	1	1
TPR-like	HSP20-like chaperones	1	1
Dcp2 domain-like	Ribonuclease H-like	1	1
Cap-Gly domain	Cap-Gly domain	1	1
PH domain-like	PH domain-like	1	1
Ribonuclease H-like	Sm-like ribonucleoproteins	1	1
C-terminal UvrC-binding domain of UvrB	ApaG-like	1	1
Helical domain of Sec23/24	ARM repeat	1	1
Creatinase/aminopeptidase	Creatinase/prolidase N-terminal domain	1	1
C-terminal, gelsolin-like domain of Sec23/24	VHP, Villin headpiece domain	1	1
Ypt/Rab-GAP domain of gyp1p	Mitochondrial carrier	1	1
Formin homology 2 domain (FH2 domain)	Oxysterol-binding protein-like	1	1
Acid proteases	PIN domain-like	1	1
SWIB/MDM2 domain	SGNH hydrolase	1	1
Homeodomain-like	NAD(P)-binding Rossmann-fold domains	1	1
DNA-glycosylase	Nudix	1	1
WD40 repeat-like	Galactose oxidase, central domain	1	1
N-terminal nucleophile aminohydrolases (Ntn hydrolases)	alpha-helical ferredoxin	1	1
DLC	DLC	1	1
Cation efflux protein transmembrane domain-like	DNA-binding domain	1	1
F-box domain	Ankyrin repeat	1	1
Concanavalin A-like lectins/glucanases	Calpain large subunit, middle domain (domain III)	1	1
WD40 repeat-like	Bromodomain	1	1
Calponin-homology domain, CH-domain	ARM repeat	1	1
P-loop containing nucleoside triphosphate hydrolases	HD-domain/PDEase-like	1	1
Concanavalin A-like lectins/glucanases	DNase I-like	1	1
Carbamate kinase-like	ALDH-like	1	1
SBT domain	Ankyrin repeat	1	1
UraD-Like	Transthyretin (synonym: prealbumin)	1	1
Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain	ACT-like	1	1
PheT/TilS domain	Class II aaRS and biotin synthetases	1	1
HAD-like	P-loop containing nucleoside triphosphate hydrolases	1	1
Purine and uridine phosphorylases	Purine and uridine phosphorylases	1	1
RNA-binding domain, RBD	alpha/beta-Hydrolases	1	1
Ribosomal protein S3 C-terminal domain	Ribosomal protein S3 C-terminal domain	1	1
C2 domain (Calcium/lipid-binding domain, CaLB)	FMN-linked oxidoreductases	1	1
Prokaryotic type KH domain (KH-domain type II)	ARM repeat	1	1
ADC-like	ADC-like	1	1
Cysteine-rich domain	NAD kinase/diacylglycerol kinase-like	1	1
Lysozyme-like	Protein kinase-like (PK-like)	1	1
Photosystem II antenna protein-like	Photosystem II antenna protein-like	1	1
Methionyl-tRNA synthetase (MetRS), Zn-domain	Nucleic acid-binding proteins	1	1
Ubiquitin-like	Cysteine proteinases	1	1
FMN-linked oxidoreductases	Protein kinase-like (PK-like)	1	1
Creatinase/aminopeptidase	"Winged helix" DNA-binding domain	1	1
Retrovirus zinc finger-like domains	Protein kinase-like (PK-like)	1	1
P-loop containing nucleoside triphosphate hydrolases	Cupredoxins	1	1
Aspartate/glutamate racemase	Aspartate/glutamate racemase	1	1
PHL pollen allergen	Protein kinase-like (PK-like)	1	1
L9 N-domain-like	Ribosomal protein L9 C-domain	1	1
CBS-domain pair	Inosine monophosphate dehydrogenase (IMPDH)	1	1
Enolase C-terminal domain-like	Enolase C-terminal domain-like	1	1
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1	Actin-crosslinking proteins	1	1
N-terminal, heterodimerisation domain of RBP7 (RpoE)	Nucleic acid-binding proteins	1	1
FAD-binding/transporter-associated domain-like	DNA-binding domain	1	1
Ribulose-phoshate binding barrel	RING/U-box	1	1
IlvD/EDD N-terminal domain-like	LeuD/IlvD-like	1	1
Surp module (SWAP domain)	Surp module (SWAP domain)	1	1
Hypothetical protein SAV1430	Hypothetical protein SAV1430	1	1
C2 domain (Calcium/lipid-binding domain, CaLB)	DNase I-like	1	1
2Fe-2S ferredoxin-like	Formate dehydrogenase/DMSO reductase, domains 1-3	1	1
Translational machinery components	Cupredoxins	1	1
PLP-binding barrel	PLP-binding barrel	1	1
Tubby C-terminal domain-like	Protein kinase-like (PK-like)	1	1
"Winged helix" DNA-binding domain	HAD-like	1	1
POZ domain	Chaperone J-domain	1	1
LuxS/MPP-like metallohydrolase	P-loop containing nucleoside triphosphate hydrolases	1	1
DNA ligase/mRNA capping enzyme, catalytic domain	Nucleic acid-binding proteins	1	1
Sigma3 and sigma4 domains of RNA polymerase sigma factors	Sigma3 and sigma4 domains of RNA polymerase sigma factors	1	1
D-aminoacid aminotransferase-like PLP-dependent enzymes	Cation efflux protein transmembrane domain-like	1	1
ARM repeat	Thioredoxin-like	1	1
NAD kinase/diacylglycerol kinase-like	NAD kinase/diacylglycerol kinase-like	1	1
Heat shock protein 70kD (HSP70), C-terminal subdomain	F-box domain	1	1
Thioredoxin-like	beta and beta-prime subunits of DNA dependent RNA-polymerase	1	1
Rhodanese/Cell cycle control phosphatase	(Phosphotyrosine protein) phosphatases II	1	1
Scaffolding protein gpD of bacteriophage procapsid	ssDNA viruses	1	1
RING/U-box	UBA-like	1	1
Carbonic anhydrase	Carbonic anhydrase	1	1
Single hybrid motif	CoA-dependent acyltransferases	1	1
RmlC-like cupins	Thioredoxin-like	1	1
ssDNA viruses	ssDNA viruses	1	1
Release factor	Release factor	1	1
CheY-like	PA domain	1	1
2Fe-2S ferredoxin-like	CO dehydrogenase ISP C-domain like	1	1
Cytochrome b5-like heme/steroid binding domain	Riboflavin synthase domain-like	1	1
Ribonuclease H-like	Toll/Interleukin receptor TIR domain	1	1
(Trans)glycosidases	Translational machinery components	1	1
Tubulin nucleotide-binding domain-like	Six-hairpin glycosidases	1	1
Isocitrate/Isopropylmalate dehydrogenase-like	Heme-dependent peroxidases	1	1
Tryptophan synthase beta subunit-like PLP-dependent enzymes	ACT-like	1	1
NTF2-like	Protein kinase-like (PK-like)	1	1
ALDH-like	Cytochrome P450	1	1
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1	N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1	1	1
FYVE/PHD zinc finger	Clavaminate synthase-like	1	1
Hypothetical protein SAV1430	Fe-S cluster assembly (FSCA) domain-like	1	1
HSP90 C-terminal domain	HSP90 C-terminal domain	1	1
Dihydropteroate synthetase-like	Dihydropteroate synthetase-like	1	1
UBC-like	Protein kinase-like (PK-like)	1	1
Leucine zipper domain	Leucine zipper domain	1	1
Sm-like ribonucleoproteins	Sm-like ribonucleoproteins	1	1
Heat shock protein 70kD (HSP70), peptide-binding domain	Heat shock protein 70kD (HSP70), peptide-binding domain	1	1
Cysteine proteinases	Actin-like ATPase domain	1	1
Dihydrofolate reductase-like	Thymidylate synthase/dCMP hydroxymethylase	1	1
Ribonuclease H-like	RuvA domain 2-like	1	1
TGS-like	ThrRS/AlaRS common domain	1	1
Zn-binding ribosomal proteins	Zn-binding ribosomal proteins	1	1
alpha/beta knot	Nucleic acid-binding proteins	1	1
Amidase signature (AS) enzymes	Amidase signature (AS) enzymes	1	1
Histone-fold	Tubulin C-terminal domain-like	1	1
PH domain-like	WD40 repeat-like	1	1
Nop domain	Nop domain	1	1
Aldolase	NAD(P)-binding Rossmann-fold domains	1	1
Tubulin C-terminal domain-like	Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain	1	1
TPR-like	GroES-like	1	1
L domain-like	Lysozyme-like	1	1
Cystatin/monellin	Ubiquitin-like	1	1
Prim-pol domain	Prim-pol domain	1	1
Clavaminate synthase-like	NAD-binding domain of HMG-CoA reductase	1	1
Thioredoxin-like	ERP29 C domain-like	1	1
Saposin	Phosphoglycerate mutase-like	1	1
Glycoside hydrolase/deacetylase	Galactose mutarotase-like	1	1
Pectin lyase-like	Mitochondrial carrier	1	1
FAD/NAD(P)-binding domain	P-loop containing nucleoside triphosphate hydrolases	1	1
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	SNARE fusion complex	1	1
(2r)-phospho-3-sulfolactate synthase ComA	(2r)-phospho-3-sulfolactate synthase ComA	1	1
MFS general substrate transporter	HAD-like	1	1
Nucleic acid-binding proteins	Ribosomal protein S5 domain 2-like	1	1
TAZ domain	FYVE/PHD zinc finger	1	1
HAD-like	dsRNA-binding domain-like	1	1
dsRNA-binding domain-like	FKBP-like	1	1
Chalcone isomerase	Thiolase-like	1	1
PAZ domain	PAZ domain	1	1
Histone-fold	Acyl-CoA N-acyltransferases (Nat)	1	1
RNI-like	PP2C-like	1	1
Kelch motif	Nucleotidylyl transferase	1	1
P-loop containing nucleoside triphosphate hydrolases	PP2C-like	1	1
P-loop containing nucleoside triphosphate hydrolases	Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain	1	1
L domain-like	Terpenoid cyclases/Protein prenyltransferases	1	1
Fe,Mn superoxide dismutase (SOD), N-terminal domain	Fe,Mn superoxide dismutase (SOD), C-terminal domain	1	1
Flavoproteins	Riboflavin synthase domain-like	1	1
Cullin repeat-like	Tubulin nucleotide-binding domain-like	1	1
Cdc48 domain 2-like	Cdc48 domain 2-like	1	1
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1	(Trans)glycosidases	1	1
PLP-dependent transferases	Acid proteases	1	1
FAD-binding/transporter-associated domain-like	CO dehydrogenase molybdoprotein N-domain-like	1	1
UDP-Glycosyltransferase/glycogen phosphorylase	Toll/Interleukin receptor TIR domain	1	1
S-adenosyl-L-methionine-dependent methyltransferases	PLP-dependent transferases	1	1
DNA-binding pseudobarrel domain	Pectin lyase-like	1	1
NAD(P)-binding Rossmann-fold domains	UBC-like	1	1
Clavaminate synthase-like	eIF4e-like	1	1
Thioredoxin-like	alpha/beta-Hydrolases	1	1
BRCT domain	FYVE/PHD zinc finger	1	1
Acetyl-CoA synthetase-like	NAD(P)-linked oxidoreductase	1	1
Adenine nucleotide alpha hydrolases-like	DHS-like NAD/FAD-binding domain	1	1
Cysteine proteinases	Purine and uridine phosphorylases	1	1
GAF domain-like	Homodimeric domain of signal transducing histidine kinase	1	1
(Phosphotyrosine protein) phosphatases II	DNA ligase/mRNA capping enzyme, catalytic domain	1	1
NAD-binding domain of HMG-CoA reductase	Toll/Interleukin receptor TIR domain	1	1
L-aspartase-like	WD40 repeat-like	1	1
Putative DNA-binding domain	Putative DNA-binding domain	1	1
Translation proteins SH3-like domain	Translation proteins SH3-like domain	1	1
Leukotriene A4 hydrolase N-terminal domain	Barwin-like endoglucanases	1	1
C-terminal autoproteolytic domain of nucleoporin nup98	C-terminal autoproteolytic domain of nucleoporin nup98	1	1
Clathrin adaptor appendage domain	Subdomain of clathrin and coatomer appendage domain	1	1
SAP domain	CCCH zinc finger	1	1
Glycolipid transfer protein, GLTP	Glycolipid transfer protein, GLTP	1	1
NAD(P)-linked oxidoreductase	PHL pollen allergen	1	1
Ribosomal protein L1	Ribosomal protein L1	1	1
Peptidase/esterase 'gauge' domain	Peptidase/esterase 'gauge' domain	1	1
Metallo-dependent phosphatases	Quinoprotein alcohol dehydrogenase-like	1	1
P-loop containing nucleoside triphosphate hydrolases	Glucocorticoid receptor-like (DNA-binding domain)	1	1
CO dehydrogenase ISP C-domain like	CO dehydrogenase flavoprotein C-terminal domain-like	1	1
Actin-like ATPase domain	BRCT domain	1	1
Concanavalin A-like lectins/glucanases	BEACH domain	1	1
Outer arm dynein light chain 1	Protein kinase-like (PK-like)	1	1
FAH	FAH	1	1
FAD/NAD(P)-binding domain	S-adenosyl-L-methionine-dependent methyltransferases	1	1
Tubulin C-terminal domain-like	Tubulin C-terminal domain-like	1	1
Eukaryotic type KH-domain (KH-domain type I)	Mitochondrial carrier	1	1
Phosphohistidine domain	Phosphoenolpyruvate/pyruvate domain	1	1
PreATP-grasp domain	Methylglyoxal synthase-like	1	1
Cdc48 domain 2-like	Cupredoxins	1	1
UBA-like	post-AAA+ oligomerization domain-like	1	1
MoeA N-terminal region -like	Molybdenum cofactor biosynthesis proteins	1	1
Cytochrome P450	Cupredoxins	1	1
Caspase-like	Caspase-like	1	1
RNA-binding domain, RBD	F-box domain	1	1
Granulin repeat	Formin homology 2 domain (FH2 domain)	1	1
Ribosomal L27 protein-like	RNA-binding domain, RBD	1	1
Ribosomal protein S6	Peptide methionine sulfoxide reductase	1	1
ADP-ribosylation	ADP-ribosylation	1	1
SMAD/FHA domain	PIN domain-like	1	1
L-aspartase-like	Class II aaRS ABD-related	1	1
RNI-like	Substrate-binding domain of HMG-CoA reductase	1	1
PRTase-like	Ribulose-phoshate binding barrel	1	1
Dcp2 domain-like	Nudix	1	1
Arabinanase/levansucrase/invertase	Arabinanase/levansucrase/invertase	1	1
Clavaminate synthase-like	Substrate-binding domain of HMG-CoA reductase	1	1
TATA-box binding protein-like	DNA-glycosylase	1	1
Phospholipase D/nuclease	DNA-binding domain	1	1
Cullin repeat-like	cAMP-binding domain-like	1	1
FYSH domain	beta-beta-alpha zinc fingers	1	1
L domain-like	Nucleotide-diphospho-sugar transferases	1	1
eEF1-gamma domain	RmlC-like cupins	1	1
SMAD/FHA domain	P-loop containing nucleoside triphosphate hydrolases	1	1
Chaperone J-domain	Thioredoxin-like	1	1
CO dehydrogenase flavoprotein C-terminal domain-like	Molybdenum cofactor-binding domain	1	1
YjeF N-terminal domain-like	FMN-binding split barrel	1	1
Molybdopterin synthase subunit MoaE	NAD(P)-linked oxidoreductase	1	1
XRCC4, N-terminal domain	XRCC4, C-terminal oligomerization domain	1	1
Ankyrin repeat	(Trans)glycosidases	1	1
P-loop containing nucleoside triphosphate hydrolases	Chaperone J-domain	1	1
Ribosomal protein L11, C-terminal domain	Ribosomal protein L11, C-terminal domain	1	1
Eukaryotic RPB5 N-terminal domain	Eukaryotic RPB5 N-terminal domain	1	1
Activator of Hsp90 ATPase, Aha1	Bet v1-like	1	1
Ligand-binding domain in the NO signalling and Golgi transport	alpha/beta-Hydrolases	1	1
Metallo-hydrolase/oxidoreductase	Metallo-hydrolase/oxidoreductase	1	1
RING/U-box	PUA domain-like	1	1
SET domain	Chromo domain-like	1	1
Nucleotidylyl transferase	Nucleic acid-binding proteins	1	1
PUA domain-like	SET domain	1	1
RNA-binding domain, RBD	PWI domain	1	1
beta-carbonic anhydrase, cab	beta-carbonic anhydrase, cab	1	1
Cytochrome P450	Sec7 domain	1	1
Cysteine proteinases	Calpain large subunit, middle domain (domain III)	1	1
L30e-like	Cupredoxins	1	1
F-box domain	NTF2-like	1	1
NAD(P)-binding Rossmann-fold domains	1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain	1	1
Chaperone J-domain	beta-beta-alpha zinc fingers	1	1
POZ domain	WD40 repeat-like	1	1
DNA-binding domain	Actin depolymerizing proteins	1	1
Ribonuclease H-like	Histone-fold	1	1
Thiolase-like	UDP-Glycosyltransferase/glycogen phosphorylase	1	1
beta and beta-prime subunits of DNA dependent RNA-polymerase	Band 7/SPFH domain	1	1
Ribosomal protein L22	ERP29 C domain-like	1	1
FYVE/PHD zinc finger	Homeodomain-like	1	1
DHS-like NAD/FAD-binding domain	alpha/beta-Hydrolases	1	1
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	Nucleic acid-binding proteins	1	1
NAD(P)-binding Rossmann-fold domains	NAC domain	1	1
Galactose mutarotase-like	Starch-binding domain-like	1	1
Thioredoxin-like	VC0467-like	1	1
BAR/IMD domain-like	SH3-domain	1	1
Obg GTP-binding protein N-terminal domain	P-loop containing nucleoside triphosphate hydrolases	1	1
RNA-binding domain, RBD	Cation efflux protein transmembrane domain-like	1	1
PH domain-like	FYVE/PHD zinc finger	1	1
F-box domain	Actin-like ATPase domain	1	1
LysM domain	Protein kinase-like (PK-like)	1	1
UDP-Glycosyltransferase/glycogen phosphorylase	L domain-like	1	1
F-box domain	Clavaminate synthase-like	1	1
Acyl-CoA binding protein	Kelch motif	1	1
Galactose oxidase, central domain	Galactose oxidase, central domain	1	1
Urease, beta-subunit	Composite domain of metallo-dependent hydrolases	1	1
Single hybrid motif	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex	1	1
LDH C-terminal domain-like	LDH C-terminal domain-like	1	1
beta and beta-prime subunits of DNA dependent RNA-polymerase	NAD(P)-binding Rossmann-fold domains	1	1
ARM repeat	POZ domain	1	1
NAD(P)-binding Rossmann-fold domains	Succinyl-CoA synthetase domains	1	1
L domain-like	FMN-linked oxidoreductases	1	1
AN1-like Zinc finger	beta-beta-alpha zinc fingers	1	1
GroEL equatorial domain-like	alpha/beta-Hydrolases	1	1
4Fe-4S ferredoxins	Formate dehydrogenase/DMSO reductase, domains 1-3	1	1
TPR-like	CRAL/TRIO N-terminal domain	1	1
RNA-binding domain, RBD	PLP-dependent transferases	1	1
Ribonuclease H-like	HRDC-like	1	1
PX domain	TPR-like	1	1
Macro domain-like	Zn-dependent exopeptidases	1	1
DNA-binding domain	Acid proteases	1	1