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Domain combination pairs in Stenotrophomonas maltophilia JV3

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

  • For a list of unique full length architectures for this genome click here (can be slow).
Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

714 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 5224
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 492
CheY-like C-terminal effector domain of the bipartite response regulators 322
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 211
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 205
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 1914
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 1816
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 176
Homodimeric domain of signal transducing histidine kinase CheY-like 1715
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 165
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 165
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 165
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 165
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 165
Homeodomain-like Homeodomain-like 149
Thioredoxin-like GST C-terminal domain-like 131
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1311
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 125
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 122
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 1210
Metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 125
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 124
Actin-like ATPase domain Actin-like ATPase domain 114
GroES-like NAD(P)-binding Rossmann-fold domains 112
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 105
Nucleotide cyclase EAL domain-like 109
Glutathione synthetase ATP-binding domain-like PreATP-grasp domain 105
P-loop containing nucleoside triphosphate hydrolases Translation proteins 96
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 99
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Histidine-containing phosphotransfer domain, HPT domain 96
Thiolase-like Thiolase-like 81
HAMP domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 82
DPP6 N-terminal domain-like alpha/beta-Hydrolases 82
CheY-like Histidine-containing phosphotransfer domain, HPT domain 86
CheY-like PYP-like sensor domain (PAS domain) 88
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 82
Homodimeric domain of signal transducing histidine kinase Histidine-containing phosphotransfer domain, HPT domain 85
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 74
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 72
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 74
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 71
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 64
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 65
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 61
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 64
Alpha-L RNA-binding motif Pseudouridine synthase 62
PYP-like sensor domain (PAS domain) Nucleotide cyclase 66
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 61
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 64
Translation proteins EF-G C-terminal domain-like 53
Phospholipase D/nuclease Phospholipase D/nuclease 54
"Winged helix" DNA-binding domain PLP-dependent transferases 52
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 55
Pectin lyase-like Autotransporter 53
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 52
CheY-like CheY-like 55
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 54
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 52
PreATP-grasp domain Rudiment single hybrid motif 52
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 53
RmlC-like cupins Homeodomain-like 52
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 43
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 43
CheY-like EAL domain-like 44
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 43
EF-G C-terminal domain-like EF-G C-terminal domain-like 42
PYP-like sensor domain (PAS domain) EAL domain-like 44
CheY-like Nucleotide cyclase 44
PA domain Zn-dependent exopeptidases 41
PurM N-terminal domain-like PurM C-terminal domain-like 42
Nucleic acid-binding proteins Nucleic acid-binding proteins 43
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 43
CheY-like Homeodomain-like 42
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 41
Homeodomain-like Ribonuclease H-like 41
HlyD-like secretion proteins HlyD-like secretion proteins 41
PapD-like Periplasmic chaperone C-domain 41
Calcium-dependent phosphotriesterase Calcium-dependent phosphotriesterase 44
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 42
Triger factor/SurA peptide-binding domain-like FKBP-like 44
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 41
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
LeuD/IlvD-like Aconitase iron-sulfur domain 33
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 32
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 31
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 33
Periplasmic binding protein-like II Homodimeric domain of signal transducing histidine kinase 33
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 33
PLP-binding barrel Alanine racemase C-terminal domain-like 33
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 33
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 31
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 33
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 32
GAF domain-like Nucleotide cyclase 33
NAD(P)-binding Rossmann-fold domains ACT-like 33
HD-domain/PDEase-like ACT-like 32
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 33
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 32
PDZ domain-like PDZ domain-like 32
Translation proteins SH3-like domain Nucleic acid-binding proteins 32
Calcium ATPase, transduction domain A HAD-like 33
Nucleotidyltransferase ACT-like 32
CBS-domain pair FAD-binding/transporter-associated domain-like 31
Periplasmic binding protein-like II ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 33
Lysozyme-like beta-lactamase/transpeptidase-like 32
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 33
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 32
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 33
Lysozyme-like PGBD-like 33
TPR-like TPR-like 33
Adhesin YadA, collagen-binding domain Pili subunits 33
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 33
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 31
CheY-like P-loop containing nucleoside triphosphate hydrolases 31
Histidine-containing phosphotransfer domain, HPT domain CheW-like 32
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 31
HAD-like Calcium ATPase, transmembrane domain M 33
Adhesin YadA, collagen-binding domain Adhesin YadA, collagen-binding domain 33
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 32
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 32
Nucleic acid-binding proteins RuvA domain 2-like 33
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 32
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 31
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 33
Flavoproteins Riboflavin synthase domain-like 32
Periplasmic binding protein-like II CheY-like 33
cAMP-binding domain-like "Winged helix" DNA-binding domain 31
Calcium-dependent phosphotriesterase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 33
Single hybrid motif CoA-dependent acyltransferases 33
Nucleotidyltransferase HD-domain/PDEase-like 32
ACT-like ACT-like 33
Cytochrome c Cytochrome c 32
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 32
PYP-like sensor domain (PAS domain) Histidine-containing phosphotransfer domain, HPT domain 22
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 21
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 22
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 22
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 22
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 22
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 22
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 21
GAF domain-like GAF domain-like 22
Periplasmic binding protein-like II Histidine-containing phosphotransfer domain, HPT domain 22
(Trans)glycosidases Beta-D-glucan exohydrolase, C-terminal domain 22
Enolase N-terminal domain-like Enolase C-terminal domain-like 21
(Trans)glycosidases Glycosyl hydrolase domain 22
Translation proteins Ribosomal protein S5 domain 2-like 21
MgtE N-terminal domain-like MgtE membrane domain-like 21
P-loop containing nucleoside triphosphate hydrolases MOP-like 21
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 21
Carbamate kinase-like ACT-like 22
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 21
ClpP/crotonase NAD(P)-binding Rossmann-fold domains 22
(Trans)glycosidases Chitinase insertion domain 22
GroES-like GroES-like 21
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 21
Class I glutamine amidotransferase-like Homeodomain-like 21
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
FAD/NAD(P)-binding domain HI0933 insert domain-like 21
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 21
CBS-domain pair MgtE membrane domain-like 21
Starch-binding domain-like Porins 21
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 22
Calcium-dependent phosphotriesterase CheY-like 22
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 22
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 21
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 21
GAF domain-like Homodimeric domain of signal transducing histidine kinase 22
Galactose-binding domain-like Galactose-binding domain-like 22
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
HAMP domain-like PYP-like sensor domain (PAS domain) 21
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 22
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 21
Nucleotidyltransferase TGS-like 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
Lysozyme-like LysM domain 22
Calcium-dependent phosphotriesterase Homodimeric domain of signal transducing histidine kinase 22
vWA-like TPR-like 22
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 22
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 22
TGS-like ACT-like 21
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
MgtE N-terminal domain-like CBS-domain pair 21
Chaperone J-domain HSP40/DnaJ peptide-binding domain 22
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 22
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 22
Succinyl-CoA synthetase domains Glutathione synthetase ATP-binding domain-like 22
L30e-like alpha/beta knot 21
CheW-like CheY-like 22
CheY-like HD-domain/PDEase-like 22
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 22
Peptidase/esterase 'gauge' domain alpha/beta-Hydrolases 21
Homodimeric domain of signal transducing histidine kinase CheW-like 21
Periplasmic binding protein-like II PYP-like sensor domain (PAS domain) 22
Regulatory protein AraC Homeodomain-like 22
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Nucleotidyltransferase Poly A polymerase C-terminal region-like 21
PGBD-like PGBD-like 22
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 21
ClpP/crotonase 6-phosphogluconate dehydrogenase C-terminal domain-like 22
alpha/beta-Hydrolases alpha/beta-Hydrolases 21
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
GAF domain-like PYP-like sensor domain (PAS domain) 22
PDZ domain-like ClpP/crotonase 21
alpha/beta-Hydrolases Galactose-binding domain-like 22
Trypsin-like serine proteases PDZ domain-like 21
ClpP/crotonase ClpP/crotonase 22
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
GreA transcript cleavage protein, N-terminal domain FKBP-like 21
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 22
(Trans)glycosidases Galactose-binding domain-like 22
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
tRNA-binding arm Class II aaRS and biotin synthetases 21
MFS general substrate transporter MFS general substrate transporter 21
DsbC/DsbG N-terminal domain-like Thioredoxin-like 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 22
Subtilisin-like Autotransporter 21
Galactose-binding domain-like Six-hairpin glycosidases 22
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 21
HD-domain/PDEase-like TGS-like 21
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 22
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 21
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 22
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 22
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 22
Galactose mutarotase-like (Trans)glycosidases 11
PKD domain Fibronectin type III 11
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 11
Periplasmic binding protein-like II ACT-like 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
PK beta-barrel domain-like PK C-terminal domain-like 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
HprK N-terminal domain-like PEP carboxykinase-like 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
OMPA-like TSP type-3 repeat 11
TGS-like Class II aaRS ABD-related 11
Nucleic acid-binding proteins BRCT domain 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
Carbamate kinase-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
Nitrous oxide reductase, N-terminal domain Nitrous oxide reductase, N-terminal domain 11
FGAM synthase PurL, linker domain PurM N-terminal domain-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Pheromone-binding domain of LuxR-like quorum-sensing transcription factors C-terminal effector domain of the bipartite response regulators 11
Cupredoxins Cupredoxins 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
DinB/YfiT-like putative metalloenzymes C-type lectin-like 11
Clc chloride channel CBS-domain pair 11
Acetyl-CoA synthetase-like Thioesterase/thiol ester dehydrase-isomerase 11
HisI-like all-alpha NTP pyrophosphatases 11
Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) 11
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 11
GroEL-intermediate domain like GroEL apical domain-like 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
PurS-like PurM C-terminal domain-like 11
Nucleotidylyl transferase tRNA-binding arm 11
beta-Galactosidase/glucuronidase domain beta-Galactosidase/glucuronidase domain 11
Class II aaRS and biotin synthetases GAD domain-like 11
PKD domain Chitinase insertion domain 11
HD-domain/PDEase-like Nucleotide cyclase 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
alpha-helical ferredoxin Nucleotide-binding domain 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
MOP-like MOP-like 11
Glycoside hydrolase/deacetylase (Trans)glycosidases 11
TPR-like Porins 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
Rudiment single hybrid motif Single hybrid motif 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Nucleotide-diphospho-sugar transferases RmlC-like cupins 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
Periplasmic binding protein-like II Periplasmic binding protein-like II 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
Phoshotransferase/anion transport protein HPr-like 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
Single hybrid motif Single hybrid motif 11
CoA-dependent acyltransferases CoA-dependent acyltransferases 11
Translation proteins Translation proteins 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors NTF2-like 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
CoA-dependent acyltransferases Acetyl-CoA synthetase-like 11
Fibronectin type III (Trans)glycosidases 11
Sensory domain-like PYP-like sensor domain (PAS domain) 11
RuvA domain 2-like BRCT domain 11
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
4Fe-4S ferredoxins ADC-like 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
CheC-like Surface presentation of antigens (SPOA) 11
Barwin-like endoglucanases Sporulation related repeat 11
TGS-like Class II aaRS and biotin synthetases 11
Zinc beta-ribbon Prokaryotic SH3-related domain 11
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 11
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) TATA-box binding protein-like 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
Putative DNA-binding domain P-loop containing nucleoside triphosphate hydrolases 11
TATA-box binding protein-like DNA-glycosylase 11
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
PHP14-like Phospholipase D/nuclease 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
Adenine nucleotide alpha hydrolases-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Nqo1 middle domain-like Nqo1C-terminal domain-like 11
Tex N-terminal region-like Ribonuclease H-like 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
Single hybrid motif FAD/NAD-linked reductases, dimerisation (C-terminal) domain 11
PIN domain-like Ribonuclease H-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
TK C-terminal domain-like Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 11
Cysteine proteinases TPR-like 11
SGNH hydrolase Autotransporter 11
DNA primase core DNA primase DnaG, C-terminal domain 11
C-terminal effector domain of the bipartite response regulators 3-carboxy-cis,cis-mucoante lactonizing enzyme 11
Galactose-binding domain-like beta-Galactosidase/glucuronidase domain 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
MFS general substrate transporter Glycerol-3-phosphate (1)-acyltransferase 11
P-loop containing nucleoside triphosphate hydrolases ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Hsp33 domain HSP33 redox switch-like 11
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 11
PurS-like Class I glutamine amidotransferase-like 11
PrpR receptor domain-like Homeodomain-like 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
PurS-like FGAM synthase PurL, linker domain 11
Aconitase B, N-terminal domain Aconitase iron-sulfur domain 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
OmpA-like OmpA-like 11
Nucleic acid-binding proteins GAD domain-like 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
SH3-domain SH3-domain 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 11
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 11
Riboflavin synthase domain-like 2Fe-2S ferredoxin-like 11
FAD-linked oxidoreductase ALDH-like 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 11
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
Actin-like ATPase domain HD-domain/PDEase-like 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
Succinyl-CoA synthetase domains Acyl-CoA N-acyltransferases (Nat) 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
Calcium-dependent phosphotriesterase Nucleotide cyclase 11
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 11
Putative DNA-binding domain Initiation factor IF2/eIF5b, domain 3 11
Acetyl-CoA synthetase-like ACP-like 11
NAD(P)-binding Rossmann-fold domains Glutathione synthetase ATP-binding domain-like 11
Chorismate mutase II Periplasmic binding protein-like II 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 11
Radical SAM enzymes RuvA domain 2-like 11
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 11
Single hybrid motif FAD/NAD(P)-binding domain 11
Carbamate kinase-like PLP-binding barrel 11
Methylglyoxal synthase-like Methylglyoxal synthase-like 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
ATP-dependent DNA ligase DNA-binding domain DNA ligase/mRNA capping enzyme, catalytic domain 11
Carboxypeptidase regulatory domain-like Porins 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Purple acid phosphatase, N-terminal domain Metallo-dependent phosphatases 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Ankyrin repeat Ankyrin repeat 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
PreATP-grasp domain Single hybrid motif 11
Putative DNA-binding domain Translation proteins 11
2Fe-2S ferredoxin-like ADC-like 11
Carbamate kinase-like Acyl-CoA N-acyltransferases (Nat) 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Molybdenum cofactor biosynthesis protein C, MoaC Molybdenum cofactor biosynthesis proteins 11
Adenine nucleotide alpha hydrolases-like Homodimeric domain of signal transducing histidine kinase 11
Nucleotidylyl transferase YegP-like 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
FMN-linked oxidoreductases Nucleotide-binding domain 11
GIY-YIG endonuclease RuvA domain 2-like 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
Ribonuclease H-like Nucleic acid-binding proteins 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 11
CoA-dependent acyltransferases alpha/beta-Hydrolases 11
HesB-like domain Rhodanese/Cell cycle control phosphatase 11
Formyltransferase FMT C-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Zn-dependent exopeptidases Class I glutamine amidotransferase-like 11
Pseudouridine synthase PUA domain-like 11
Glycoside hydrolase/deacetylase Caspase-like 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
Nucleic acid-binding proteins PheT/TilS domain 11
ATP-dependent DNA ligase DNA-binding domain Nucleic acid-binding proteins 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
Acid proteases PDZ domain-like 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
TGS-like ThrRS/AlaRS common domain 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
Nucleotidyltransferase Nucleotidyltransferase 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
Galactose mutarotase-like E set domains 11
Thioredoxin-like FAD/NAD(P)-binding domain 11
Nucleotide cyclase TPR-like 11
C-terminal effector domain of the bipartite response regulators DPP6 N-terminal domain-like 11
Tex N-terminal region-like RuvA domain 2-like 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
Homeodomain-like DNA-glycosylase 11
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 11
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 11
"Winged helix" DNA-binding domain Class II aaRS and biotin synthetases 11
FKBP-like FKBP-like 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain "Winged helix" DNA-binding domain 11
Phoshotransferase/anion transport protein Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 11
SMAD/FHA domain P-loop containing nucleoside triphosphate hydrolases 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
alpha/beta-Hydrolases S-adenosyl-L-methionine-dependent methyltransferases 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 11
Protein kinase-like (PK-like) LanC-like 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
DPP6 N-terminal domain-like 3-carboxy-cis,cis-mucoante lactonizing enzyme 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
beta-Galactosidase/glucuronidase domain (Trans)glycosidases 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) DNA-glycosylase 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
PrpR receptor domain-like P-loop containing nucleoside triphosphate hydrolases 11
Glutathione synthetase ATP-binding domain-like Acyl-CoA N-acyltransferases (Nat) 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Zinc beta-ribbon DNA primase core 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Glutathione synthetase ATP-binding domain-like Single hybrid motif 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
HesB-like domain Fe-S cluster assembly (FSCA) domain-like 11
ACT-like Alanine racemase C-terminal domain-like 11
Aconitase B, N-terminal domain LeuD/IlvD-like 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
PreATP-grasp domain Methylglyoxal synthase-like 11
Thioredoxin-like Thioredoxin-like 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
Ribosomal protein L6 Ribosomal protein L6 11
Translation proteins PRC-barrel domain 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
ACT-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
GAF domain-like CheY-like 11
DNA clamp DNA clamp 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
TSP type-3 repeat OmpA-like 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
Carbamate kinase-like NAD(P)-binding Rossmann-fold domains 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
Sporulation related repeat Sporulation related repeat 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Dihydropteroate synthetase-like Methionine synthase domain 11
YrdC/RibB RibA-like 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
"Winged helix" DNA-binding domain GAF domain-like 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
Metalloproteases ("zincins"), catalytic domain ARM repeat 11
NAD(P)-binding Rossmann-fold domains Acyl-CoA N-acyltransferases (Nat) 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
HMA, heavy metal-associated domain HAD-like 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
Pectin lyase-like Pectin lyase-like 11
Translation proteins ThrRS/AlaRS common domain 11
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
PKD domain (Trans)glycosidases 11
Phoshotransferase/anion transport protein Phosphoenolpyruvate/pyruvate domain 11
TrkA C-terminal domain-like TrkA C-terminal domain-like 11
MoeA N-terminal region -like MoeA C-terminal domain-like 11
MetI-like P-loop containing nucleoside triphosphate hydrolases 11
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 11
PLP-dependent transferases PLP-dependent transferases 11
Thioredoxin-like Rhodanese/Cell cycle control phosphatase 11
Ricin B-like lectins Ricin B-like lectins 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
"Winged helix" DNA-binding domain Chorismate lyase-like 11
FliG FliG 11
CheY-like Methylesterase CheB, C-terminal domain 11
Nucleotidylyl transferase P-loop containing nucleoside triphosphate hydrolases 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) Thioredoxin-like 11
PYP-like sensor domain (PAS domain) Homeodomain-like 11
Homeodomain-like Probable bacterial effector-binding domain 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Fibronectin type III Chitinase insertion domain 11
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases Homodimeric domain of signal transducing histidine kinase 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
Phoshotransferase/anion transport protein Phosphohistidine domain 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
HRDC-like HRDC-like 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
Chorismate mutase II ACT-like 11
YjeF N-terminal domain-like Ribokinase-like 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
Globin-like Nucleotide cyclase 11
DNA topoisomerase I domain DNA breaking-rejoining enzymes 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
Trigger factor ribosome-binding domain FKBP-like 11
P-loop containing nucleoside triphosphate hydrolases ACT-like 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
Thioredoxin-like HesB-like domain 11
Translation proteins "Winged helix" DNA-binding domain 11
Phase 1 flagellin Phase 1 flagellin 11
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
Myosin rod fragments Duplicated hybrid motif 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
HAMP domain-like Nucleotide cyclase 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
PUA domain-like alpha/beta knot 11
Carbamate kinase-like PUA domain-like 11
ACT-like Formyltransferase 11
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 11
Cadherin-like Autotransporter 11
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 11
HPr-like Phosphoenolpyruvate/pyruvate domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
Carbamate kinase-like Alanine racemase C-terminal domain-like 11
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 11
Ribonuclease H-like DNA/RNA polymerases 11
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 11
Ribonuclease H-like RuvA domain 2-like 11
MesJ substrate recognition domain-like PheT/TilS domain 11
Homeodomain-like SIS domain 11
Sigma2 domain of RNA polymerase sigma factors NTF2-like 11
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 11
Galactose mutarotase-like Galactose-binding domain-like 11
FGAM synthase PurL, linker domain PurM C-terminal domain-like 11
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 11
Acetyl-CoA synthetase-like alpha/beta-Hydrolases 11
Cadherin-like Cadherin-like 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
Bacterial muramidases Lysozyme-like 11
Rad51 N-terminal domain-like Rad51 N-terminal domain-like 11
ACP-like alpha/beta-Hydrolases 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
Glycosyl hydrolase domain Galactose-binding domain-like 11
PPK N-terminal domain-like PHP14-like 11
Rhodanese/Cell cycle control phosphatase Activating enzymes of the ubiquitin-like proteins 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
HPr-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
PIN domain-like DNA/RNA polymerases 11
"Winged helix" DNA-binding domain C-terminal domain of transcriptional repressors 11
PreATP-grasp domain PreATP-grasp domain 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleic acid-binding proteins 11
PheT/TilS domain Putative DNA-binding domain 11
"Winged helix" DNA-binding domain MOP-like 11
ACT-like PLP-binding barrel 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Zinc beta-ribbon DNA primase DnaG, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
RNase III domain-like dsRNA-binding domain-like 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
PTS system IIB component-like PTS system IIB component-like 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
Sensory domain-like Sensory domain-like 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
Caspase-like TPR-like 11
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 11
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 11
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes CBS-domain pair 11
HAMP domain-like EAL domain-like 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
OMPA-like OmpA-like 11
Ferredoxin reductase-like, C-terminal NADP-linked domain 2Fe-2S ferredoxin-like 11
Glycoside hydrolase/deacetylase TPR-like 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
Leukotriene A4 hydrolase N-terminal domain ARM repeat 11
RuvA domain 2-like RuvA domain 2-like 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
P-loop containing nucleoside triphosphate hydrolases Adenine nucleotide alpha hydrolases-like 11
Sensory domain-like CheY-like 11
beta-N-acetylhexosaminidase-like domain (Trans)glycosidases 11
TPR-like UDP-Glycosyltransferase/glycogen phosphorylase 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
JAB1/MPN domain Cysteine proteinases 11
Glycerol-3-phosphate (1)-acyltransferase Acyl-CoA N-acyltransferases (Nat) 11
cAMP-binding domain-like Nucleotide cyclase 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Nucleotide-binding domain FAD/NAD(P)-binding domain 11
Class II aaRS and biotin synthetases Translation proteins 11
DNA-glycosylase Nudix 11
GroEL equatorial domain-like GroEL apical domain-like 11
Nucleotidylyl transferase Riboflavin kinase-like 11
Thioredoxin-like NHL repeat 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
Galactose mutarotase-like Glycosyl hydrolase domain 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
PurS-like PurM N-terminal domain-like 11
PGBD-like L,D-transpeptidase catalytic domain-like 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
Nudix Thiamin phosphate synthase 11
CoA-dependent acyltransferases ACP-like 11
Ribonuclease H-like HRDC-like 11
6-phosphogluconate dehydrogenase C-terminal domain-like ACT-like 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
Nucleotidylyl transferase Nudix 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
Nucleotidyltransferase substrate binding subunit/domain HD-domain/PDEase-like 11
Folate-binding domain Aminomethyltransferase beta-barrel domain 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
Subtilisin-like Galactose-binding domain-like 11
Nucleotide-diphospho-sugar transferases EspE N-terminal domain-like 11
HAD-like Ribosomal protein S5 domain 2-like 11
EspE N-terminal domain-like EspE N-terminal domain-like 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
YajQ-like YajQ-like 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
GAF domain-like EAL domain-like 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
Homeodomain-like TATA-box binding protein-like 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 11
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase domain 11
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Histidine-containing phosphotransfer domain, HPT domain Histidine-containing phosphotransfer domain, HPT domain 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
Methionine synthase domain Methionine synthase activation domain-like 11
Sensory domain-like Nucleotide cyclase 11
CarD-like TRCF domain-like 11
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 11
Macro domain-like Zn-dependent exopeptidases 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Homeodomain-like 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
HPr-like Phosphohistidine domain 11
Nucleotide-diphospho-sugar transferases UDP-Glycosyltransferase/glycogen phosphorylase 11

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