Enzyme Commission (EC)
Each enzyme is allocated a four-digit EC number, the first three digits of which define the reaction catalysed and the fourth of which is a unique identifier (serial number). Each enzyme is also assigned a systematic name that uniquely defines the reaction catalysed. To navigate hierarchical structure of EC, we display all parental EC terms to the current EC term of interest ordered by their shortest distances to the current term. Also, only direct children EC terms of the current EC term are listed.
Structural Classification of Proteins (SCOP)
SCOP classifies evolutionary-related domains into
Superfamily level and
Family level. Accordingly, we have generated the domain-centric EC annotations for each of the three concepts at each of the two domain levels.
Structural Domain Enzyme Commission Ontology (SDEO)
As domain-centric ontology, SDEO only refers to those EC terms which are the most informative to annotate SCOP domains.
EC annotations for SCOP domains
For details, please visit
Documentation: EC annotations for SCOP domains. Therein, we provide several relevant files (
Data Availability) for the download, including an annotation file (i.e.,
Domain2EC.txt) and the corresponding ontology (i.e.,
SDEO.txt).
Supra-domain Enzyme Commission Ontology (SPEO)
As an extension, SPEO includes those EC terms which are the most informative to annotate supra-domains and individual SCOP domains at the
Superfamily level.
EC annotations for Supra-domains
For details, please visit
Documentation: EC annotations for Supra-domains. Therein, we provide several relevant files (
Data Availability) for the download, including a annotation file (i.e.,
SP2EC.txt) and an ontology (i.e.,
SPEO.txt). For the sake of being browsable, listed below are those supra-domains (single, dual, triple, quad).
Shortest distance to current term (+ for parents, - for children) |
EC term [EC ID] <#Children> |
(#SF|#FA) |
#Supra-domain (Single|Duplex|Triple) |
+ + + 3: | root [root] <6> |
+ + 2: | Oxidoreductases [1] <23> | (183|263) |
(202|169|83) |
+ 1: | Acting on the CH-OH group of donors [1.1] <8> | (48|64) |
(54|45|27) |
0: | With NAD(+) or NADP(+) as acceptor [1.1.1] <328> | (41|57) |
(45|42|27) |
- 1: | (+)-borneol dehydrogenase [1.1.1.198] | (0|0) |
(0|0|0) |
- 1: | (+)-neomenthol dehydrogenase [1.1.1.208] | (0|0) |
(0|0|0) |
- 1: | (+)-sabinol dehydrogenase [1.1.1.228] | (0|0) |
(0|0|0) |
- 1: | (+)-trans-carveol dehydrogenase [1.1.1.275] | (0|0) |
(0|0|0) |
- 1: | (-)-borneol dehydrogenase [1.1.1.227] | (0|0) |
(0|0|0) |
- 1: | (-)-menthol dehydrogenase [1.1.1.207] | (0|0) |
(0|0|0) |
- 1: | (-)-trans-carveol dehydrogenase [1.1.1.n4] | (0|0) |
(0|0|0) |
- 1: | (R)-2-hydroxy-fatty-acid dehydrogenase [1.1.1.98] | (0|0) |
(0|0|0) |
- 1: | (R)-2-hydroxyacid dehydrogenase [1.1.1.272] | (0|0) |
(0|0|0) |
- 1: | (R)-3-hydroxyacid-ester dehydrogenase [1.1.1.279] | (0|0) |
(0|0|0) |
- 1: | (R)-4-hydroxyphenyllactate dehydrogenase [1.1.1.222] | (0|0) |
(0|0|0) |
- 1: | (R)-aminopropanol dehydrogenase [1.1.1.75] | (0|0) |
(0|0|0) |
- 1: | (R,R)-butanediol dehydrogenase [1.1.1.4] | (0|0) |
(0|0|0) |
- 1: | (S)-1-phenylethanol dehydrogenase [1.1.1.311] | (0|0) |
(0|0|0) |
- 1: | (S)-2-hydroxy-fatty-acid dehydrogenase [1.1.1.99] | (0|0) |
(0|0|0) |
- 1: | (S)-3-hydroxyacid-ester dehydrogenase [1.1.1.280] | (0|0) |
(0|0|0) |
- 1: | (S)-carnitine 3-dehydrogenase [1.1.1.254] | (0|0) |
(0|0|0) |
- 1: | (S)-sulfolactate dehydrogenase [1.1.1.310] | (0|0) |
(0|0|0) |
- 1: | (S)-usnate reductase [1.1.1.199] | (0|0) |
(0|0|0) |
- 1: | (S,S)-butanediol dehydrogenase [1.1.1.76] | (0|0) |
(0|0|0) |
- 1: | 1,3-propanediol dehydrogenase [1.1.1.202] | (0|0) |
(0|0|0) |
- 1: | 1,5-anhydro-D-fructose reductase [1.1.1.263] | (1|1) |
(1|0|0) |
- 1: | 1,5-anhydro-D-fructose reductase (1,5-anhydro-D-ma [1.1.1.292] | (0|0) |
(0|0|0) |
- 1: | 1-deoxy-D-xylulose-5-phosphate reductoisomerase [1.1.1.267] | (3|3) |
(3|2|1) |
- 1: | 11-beta-hydroxysteroid dehydrogenase [1.1.1.146] | (0|1) |
(0|0|0) |
- 1: | 11-cis-retinol dehydrogenase [1.1.1.315] | (0|0) |
(0|0|0) |
- 1: | 12-alpha-hydroxysteroid dehydrogenase [1.1.1.176] | (0|0) |
(0|0|0) |
- 1: | 12-beta-hydroxysteroid dehydrogenase [1.1.1.238] | (0|0) |
(0|0|0) |
- 1: | 15-hydroxyicosatetraenoate dehydrogenase [1.1.1.232] | (0|0) |
(0|0|0) |
- 1: | 15-hydroxyprostaglandin dehydrogenase (NAD(+)) [1.1.1.141] | (0|1) |
(0|0|0) |
- 1: | 15-hydroxyprostaglandin dehydrogenase (NADP(+)) [1.1.1.197] | (0|1) |
(0|0|0) |
- 1: | 15-hydroxyprostaglandin-D dehydrogenase (NADP(+)) [1.1.1.196] | (0|0) |
(0|0|0) |
- 1: | 15-hydroxyprostaglandin-I dehydrogenase (NADP(+)) [1.1.1.231] | (0|0) |
(0|0|0) |
- 1: | 16-alpha-hydroxysteroid dehydrogenase [1.1.1.147] | (0|0) |
(0|0|0) |
- 1: | 2,5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5' [1.1.1.302] | (0|0) |
(0|0|0) |
- 1: | 2,5-didehydrogluconate reductase [1.1.1.274] | (1|1) |
(1|0|0) |
- 1: | 2-(R)-hydroxypropyl-CoM dehydrogenase [1.1.1.268] | (0|0) |
(0|0|0) |
- 1: | 2-(S)-hydroxypropyl-CoM dehydrogenase [1.1.1.269] | (0|0) |
(0|0|0) |
- 1: | 2-alkyn-1-ol dehydrogenase [1.1.1.165] | (0|0) |
(0|0|0) |
- 1: | 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [1.1.1.127] | (0|0) |
(0|0|0) |
- 1: | 2-dehydro-3-deoxy-D-gluconate 6-dehydrogenase [1.1.1.126] | (0|0) |
(0|0|0) |
- 1: | 2-dehydropantoate 2-reductase [1.1.1.169] | (1|1) |
(1|1|0) |
- 1: | 2-dehydropantolactone reductase (A-specific) [1.1.1.168] | (0|0) |
(0|0|0) |
- 1: | 2-dehydropantolactone reductase (B-specific) [1.1.1.214] | (0|0) |
(0|0|0) |
- 1: | 2-deoxy-D-gluconate 3-dehydrogenase [1.1.1.125] | (0|0) |
(0|0|0) |
- 1: | 2-hydroxy-3-oxopropionate reductase [1.1.1.60] | (0|0) |
(0|0|0) |
- 1: | 2-hydroxy-4-carboxymuconate semialdehyde hemiaceta [1.1.1.312] | (0|0) |
(0|0|0) |
- 1: | 2-hydroxymethylglutarate dehydrogenase [1.1.1.291] | (0|0) |
(0|0|0) |
- 1: | 2-oxoadipate reductase [1.1.1.172] | (0|0) |
(0|0|0) |
- 1: | 20-alpha-hydroxysteroid dehydrogenase [1.1.1.149] | (1|1) |
(1|0|0) |
- 1: | 21-hydroxysteroid dehydrogenase (NAD(+)) [1.1.1.150] | (0|0) |
(0|0|0) |
- 1: | 21-hydroxysteroid dehydrogenase (NADP(+)) [1.1.1.151] | (0|0) |
(0|0|0) |
- 1: | 3''-deamino-3''-oxonicotianamine reductase [1.1.1.285] | (0|0) |
(0|0|0) |
- 1: | 3(or 17)-alpha-hydroxysteroid dehydrogenase [1.1.1.209] | (0|0) |
(0|0|0) |
- 1: | 3(or 17)-beta-hydroxysteroid dehydrogenase [1.1.1.51] | (0|0) |
(0|0|0) |
- 1: | 3-(imidazol-5-yl)lactate dehydrogenase [1.1.1.111] | (0|0) |
(0|0|0) |
- 1: | 3-alpha-(17-beta)-hydroxysteroid dehydrogenase (NA [1.1.1.239] | (0|0) |
(0|0|0) |
- 1: | 3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase [1.1.1.53] | (0|0) |
(0|0|0) |
- 1: | 3-alpha-hydroxy-5-beta-androstane-17-one 3-alpha-d [1.1.1.152] | (0|0) |
(0|0|0) |
- 1: | 3-alpha-hydroxycholanate dehydrogenase [1.1.1.52] | (0|0) |
(0|0|0) |
- 1: | 3-alpha-hydroxyglycyrrhetinate dehydrogenase [1.1.1.230] | (0|0) |
(0|0|0) |
- 1: | 3-alpha-hydroxysteroid dehydrogenase (A-specific) [1.1.1.213] | (0|0) |
(1|0|0) |
- 1: | 3-alpha-hydroxysteroid dehydrogenase (B-specific) [1.1.1.50] | (0|0) |
(1|0|0) |
- 1: | 3-beta-(or 20-alpha)-hydroxysteroid dehydrogenase [1.1.1.210] | (0|0) |
(0|0|0) |
- 1: | 3-beta-hydroxy-5-alpha-steroid dehydrogenase [1.1.1.278] | (0|0) |
(0|0|0) |
- 1: | 3-beta-hydroxy-5-beta-steroid dehydrogenase [1.1.1.277] | (0|0) |
(0|0|0) |
- 1: | 3-beta-hydroxy-Delta(5)-steroid dehydrogenase [1.1.1.145] | (0|1) |
(0|0|0) |
- 1: | 3-dehydro-L-gulonate 2-dehydrogenase [1.1.1.130] | (1|1) |
(1|0|0) |
- 1: | 3-dehydrosphinganine reductase [1.1.1.102] | (0|1) |
(0|0|0) |
- 1: | 3-hydroxy-2-methylbutyryl-CoA dehydrogenase [1.1.1.178] | (0|1) |
(0|0|0) |
- 1: | 3-hydroxyacyl-CoA dehydrogenase [1.1.1.35] | (3|3) |
(3|4|3) |
- 1: | 3-hydroxybenzyl-alcohol dehydrogenase [1.1.1.97] | (0|0) |
(0|0|0) |
- 1: | 3-hydroxybutyrate dehydrogenase [1.1.1.30] | (0|1) |
(0|0|0) |
- 1: | 3-hydroxybutyryl-CoA dehydrogenase [1.1.1.157] | (1|2) |
(1|1|0) |
- 1: | 3-hydroxyisobutyrate dehydrogenase [1.1.1.31] | (1|2) |
(1|1|0) |
- 1: | 3-hydroxypimeloyl-CoA dehydrogenase [1.1.1.259] | (0|0) |
(0|0|0) |
- 1: | 3-hydroxypropionate dehydrogenase [1.1.1.59] | (0|0) |
(0|0|0) |
- 1: | 3-hydroxypropionate dehydrogenase (NADP(+)) [1.1.1.298] | (1|1) |
(1|0|0) |
- 1: | 3-isopropylmalate dehydrogenase [1.1.1.85] | (1|1) |
(1|0|0) |
- 1: | 3-keto-steroid reductase [1.1.1.270] | (0|1) |
(0|0|0) |
- 1: | 3-methylbutanal reductase [1.1.1.265] | (0|0) |
(0|0|0) |
- 1: | 3-methylmalate dehydrogenase [1.1.1.n5] | (0|0) |
(0|0|0) |
- 1: | 3-oxoacyl-[acyl-carrier-protein] reductase [1.1.1.100] | (5|5) |
(6|4|3) |
- 1: | 3-oxoacyl-[acyl-carrier-protein] reductase (NADH) [1.1.1.212] | (0|0) |
(0|0|0) |
- 1: | 4-(hydroxymethyl)benzenesulfonate dehydrogenase [1.1.1.257] | (0|0) |
(0|0|0) |
- 1: | 4-hydroxybutyrate dehydrogenase [1.1.1.61] | (0|0) |
(0|0|0) |
- 1: | 4-hydroxycyclohexanecarboxylate dehydrogenase [1.1.1.226] | (0|0) |
(0|0|0) |
- 1: | 4-hydroxythreonine-4-phosphate dehydrogenase [1.1.1.262] | (1|1) |
(1|0|0) |
- 1: | 4-oxoproline reductase [1.1.1.104] | (0|0) |
(0|0|0) |
- 1: | 4-phosphoerythronate dehydrogenase [1.1.1.290] | (1|2) |
(2|1|0) |
- 1: | 5-amino-6-(5-phosphoribosylamino)uracil reductase [1.1.1.193] | (2|2) |
(2|1|0) |
- 1: | 6-endo-hydroxycineole dehydrogenase [1.1.1.241] | (0|0) |
(0|0|0) |
- 1: | 6-hydroxyhexanoate dehydrogenase [1.1.1.258] | (0|0) |
(0|0|0) |
- 1: | 6-pyruvoyltetrahydropterin 2'-reductase [1.1.1.220] | (0|0) |
(0|0|0) |
- 1: | 7-alpha-hydroxysteroid dehydrogenase [1.1.1.159] | (0|0) |
(0|0|0) |
- 1: | 7-beta-hydroxysteroid dehydrogenase (NADP(+)) [1.1.1.201] | (0|0) |
(0|0|0) |
- 1: | 8-oxocoformycin reductase [1.1.1.235] | (0|0) |
(0|0|0) |
- 1: | Acetoacetyl-CoA reductase [1.1.1.36] | (0|1) |
(0|0|0) |
- 1: | Acylglycerone-phosphate reductase [1.1.1.101] | (0|0) |
(0|0|0) |
- 1: | Alcohol dehydrogenase [1.1.1.1] | (2|4) |
(2|3|1) |
- 1: | Alcohol dehydrogenase (NAD(P)(+)) [1.1.1.71] | (0|0) |
(0|0|0) |
- 1: | Alcohol dehydrogenase (NADP(+)) [1.1.1.2] | (2|3) |
(2|1|0) |
- 1: | Aldehyde reductase [1.1.1.21] | (1|1) |
(1|0|0) |
- 1: | Aldose 1-dehydrogenase [1.1.1.121] | (0|0) |
(0|0|0) |
- 1: | Aldose-6-phosphate reductase (NADPH) [1.1.1.200] | (0|0) |
(0|0|0) |
- 1: | All-trans-retinol dehydrogenase (NAD(+)) [1.1.1.105] | (0|1) |
(0|0|0) |
- 1: | Allyl-alcohol dehydrogenase [1.1.1.54] | (0|0) |
(0|0|0) |
- 1: | Apiose 1-reductase [1.1.1.114] | (0|0) |
(0|0|0) |
- 1: | Aryl-alcohol dehydrogenase [1.1.1.90] | (0|0) |
(0|0|0) |
- 1: | Aryl-alcohol dehydrogenase (NADP(+)) [1.1.1.91] | (0|0) |
(0|0|0) |
- 1: | Benzil reductase ((S)-benzoin forming) [1.1.1.n7] | (0|0) |
(0|0|0) |
- 1: | Benzyl-2-methyl-hydroxybutyrate dehydrogenase [1.1.1.217] | (0|0) |
(0|0|0) |
- 1: | Carbonyl reductase (NADPH) [1.1.1.184] | (0|1) |
(0|0|0) |
- 1: | Carnitine 3-dehydrogenase [1.1.1.108] | (0|0) |
(2|2|1) |
- 1: | Carveol dehydrogenase [1.1.1.243] | (0|0) |
(0|0|0) |
- 1: | Chlordecone reductase [1.1.1.225] | (0|0) |
(1|0|0) |
- 1: | Chlorophyll(ide) b reductase [1.1.1.294] | (0|0) |
(0|0|0) |
- 1: | Cholest-5-ene-3-beta,7-alpha-diol 3-beta-dehydroge [1.1.1.181] | (0|0) |
(0|0|0) |
- 1: | Cholestanetetraol 26-dehydrogenase [1.1.1.161] | (0|0) |
(0|0|0) |
- 1: | Cinnamyl-alcohol dehydrogenase [1.1.1.195] | (1|2) |
(1|1|0) |
- 1: | Codeinone reductase (NADPH) [1.1.1.247] | (0|0) |
(0|0|0) |
- 1: | Coniferyl-alcohol dehydrogenase [1.1.1.194] | (0|0) |
(0|0|0) |
- 1: | Cyclohexane-1,2-diol dehydrogenase [1.1.1.174] | (0|0) |
(0|0|0) |
- 1: | Cyclohexanol dehydrogenase [1.1.1.245] | (0|0) |
(0|0|0) |
- 1: | Cyclopentanol dehydrogenase [1.1.1.163] | (0|0) |
(0|0|0) |
- 1: | D-arabinitol 2-dehydrogenase [1.1.1.250] | (0|0) |
(0|0|0) |
- 1: | D-arabinitol 4-dehydrogenase [1.1.1.11] | (0|0) |
(0|0|0) |
- 1: | D-arabinitol dehydrogenase (NADP(+)) [1.1.1.287] | (0|0) |
(0|0|0) |
- 1: | D-arabinose 1-dehydrogenase [1.1.1.116] | (0|0) |
(0|0|0) |
- 1: | D-arabinose 1-dehydrogenase (NAD(P)(+)) [1.1.1.117] | (0|0) |
(0|0|0) |
- 1: | D-arabitol-phosphate dehydrogenase [1.1.1.301] | (0|0) |
(0|0|0) |
- 1: | D-chiro-inositol 3-dehydrogenase [1.1.1.n6] | (1|1) |
(1|1|0) |
- 1: | D-galactose 1-dehydrogenase [1.1.1.48] | (0|0) |
(0|0|0) |
- 1: | D-galacturonate reductase [1.1.1.n9] | (0|0) |
(0|0|0) |
- 1: | D-iditol 2-dehydrogenase [1.1.1.15] | (0|0) |
(0|0|0) |
- 1: | D-lactate dehydrogenase [1.1.1.28] | (1|2) |
(1|1|0) |
- 1: | D-malate dehydrogenase (decarboxylating) [1.1.1.83] | (1|1) |
(1|0|0) |
- 1: | D-pinitol dehydrogenase [1.1.1.142] | (0|0) |
(0|0|0) |
- 1: | D-threo-aldose 1-dehydrogenase [1.1.1.122] | (0|0) |
(0|0|0) |
- 1: | D-xylose 1-dehydrogenase [1.1.1.175] | (0|0) |
(0|0|0) |
- 1: | D-xylose 1-dehydrogenase (NADP(+)) [1.1.1.179] | (1|2) |
(1|1|0) |
- 1: | D-xylose reductase [1.1.1.307] | (1|1) |
(1|0|0) |
- 1: | D-xylulose reductase [1.1.1.9] | (1|2) |
(1|1|0) |
- 1: | Deleted entry [1.1.1.293] | (0|0) |
(0|0|0) |
- 1: | Deleted entry [1.1.1.74] | (0|0) |
(0|0|0) |
- 1: | Deleted entry [1.1.1.128] | (0|0) |
(0|0|0) |
- 1: | Diacetyl reductase ((R)-acetoin forming) [1.1.1.303] | (0|0) |
(0|0|0) |
- 1: | Diacetyl reductase ((S)-acetoin forming) [1.1.1.304] | (0|1) |
(0|0|0) |
- 1: | Diethyl 2-methyl-3-oxosuccinate reductase [1.1.1.229] | (0|0) |
(0|0|0) |
- 1: | Dihydrobunolol dehydrogenase [1.1.1.160] | (0|0) |
(0|0|0) |
- 1: | Dihydrocarveol dehydrogenase [1.1.1.296] | (0|0) |
(0|0|0) |
- 1: | Dihydrokaempferol 4-reductase [1.1.1.219] | (0|1) |
(0|0|0) |
- 1: | Diiodophenylpyruvate reductase [1.1.1.96] | (0|0) |
(0|0|0) |
- 1: | Dimethylmalate dehydrogenase [1.1.1.84] | (0|0) |
(0|0|0) |
- 1: | Erythrulose reductase [1.1.1.162] | (0|0) |
(0|0|0) |
- 1: | Estradiol 17-alpha-dehydrogenase [1.1.1.148] | (0|0) |
(0|0|0) |
- 1: | Estradiol 17-beta-dehydrogenase [1.1.1.62] | (0|1) |
(0|0|0) |
- 1: | Farnesol dehydrogenase [1.1.1.216] | (0|0) |
(0|0|0) |
- 1: | Flavanone 4-reductase [1.1.1.234] | (0|0) |
(0|0|0) |
- 1: | Fluoren-9-ol dehydrogenase [1.1.1.256] | (0|0) |
(0|0|0) |
- 1: | Fructose 5-dehydrogenase (NADP(+)) [1.1.1.124] | (0|0) |
(0|0|0) |
- 1: | Fructuronate reductase [1.1.1.57] | (0|0) |
(0|0|0) |
- 1: | GDP-4-dehydro-6-deoxy-D-mannose reductase [1.1.1.281] | (0|0) |
(0|0|0) |
- 1: | GDP-4-dehydro-D-rhamnose reductase [1.1.1.187] | (0|0) |
(0|0|0) |
- 1: | GDP-6-deoxy-D-talose 4-dehydrogenase [1.1.1.135] | (0|0) |
(0|0|0) |
- 1: | GDP-L-fucose synthase [1.1.1.271] | (0|1) |
(0|0|0) |
- 1: | GDP-mannose 6-dehydrogenase [1.1.1.132] | (1|3) |
(1|1|1) |
- 1: | Galactitol 2-dehydrogenase [1.1.1.16] | (0|0) |
(0|0|0) |
- 1: | Galactitol-1-phosphate 5-dehydrogenase [1.1.1.251] | (0|0) |
(0|0|0) |
- 1: | Galactose 1-dehydrogenase (NADP(+)) [1.1.1.120] | (0|0) |
(0|0|0) |
- 1: | Geraniol dehydrogenase [1.1.1.183] | (0|0) |
(0|0|0) |
- 1: | Germacrene A alcohol dehydrogenase [1.1.1.314] | (1|1) |
(1|0|0) |
- 1: | Gluconate 2-dehydrogenase [1.1.1.215] | (0|0) |
(1|1|0) |
- 1: | Gluconate 5-dehydrogenase [1.1.1.69] | (0|0) |
(0|0|0) |
- 1: | Glucose 1-dehydrogenase [1.1.1.47] | (1|2) |
(2|1|0) |
- 1: | Glucose 1-dehydrogenase (NAD(+)) [1.1.1.118] | (0|0) |
(0|0|0) |
- 1: | Glucose 1-dehydrogenase (NADP(+)) [1.1.1.119] | (0|0) |
(0|0|0) |
- 1: | Glucose-6-phosphate dehydrogenase [1.1.1.49] | (1|2) |
(1|1|0) |
- 1: | Glucuronate reductase [1.1.1.19] | (0|0) |
(0|0|0) |
- 1: | Glucuronolactone reductase [1.1.1.20] | (0|0) |
(0|0|0) |
- 1: | Glycerate dehydrogenase [1.1.1.29] | (0|0) |
(1|1|0) |
- 1: | Glycerol 2-dehydrogenase (NADP(+)) [1.1.1.156] | (0|0) |
(0|0|0) |
- 1: | Glycerol dehydrogenase [1.1.1.6] | (1|1) |
(1|0|0) |
- 1: | Glycerol dehydrogenase (NADP(+)) [1.1.1.72] | (0|0) |
(0|0|0) |
- 1: | Glycerol-3-phosphate 1-dehydrogenase (NADP(+)) [1.1.1.177] | (0|0) |
(0|0|0) |
- 1: | Glycerol-3-phosphate dehydrogenase (NAD(+)) [1.1.1.8] | (1|2) |
(1|1|0) |
- 1: | Glycerol-3-phosphate dehydrogenase (NAD(P)(+)) [1.1.1.94] | (2|2) |
(2|1|0) |
- 1: | Glyoxylate reductase [1.1.1.26] | (1|2) |
(1|1|0) |
- 1: | Glyoxylate reductase (NADP(+)) [1.1.1.79] | (1|2) |
(1|1|0) |
- 1: | Hexadecanol dehydrogenase [1.1.1.164] | (0|0) |
(0|0|0) |
- 1: | Histidinol dehydrogenase [1.1.1.23] | (3|2) |
(3|2|1) |
- 1: | Homoisocitrate dehydrogenase [1.1.1.87] | (0|0) |
(1|0|0) |
- 1: | Homoserine dehydrogenase [1.1.1.3] | (3|4) |
(3|5|4) |
- 1: | Hydroxycyclohexanecarboxylate dehydrogenase [1.1.1.166] | (0|0) |
(0|0|0) |
- 1: | Hydroxymalonate dehydrogenase [1.1.1.167] | (0|0) |
(0|0|0) |
- 1: | Hydroxymethylglutaryl-CoA reductase [1.1.1.88] | (0|0) |
(0|0|0) |
- 1: | Hydroxymethylglutaryl-CoA reductase (NADPH) [1.1.1.34] | (3|2) |
(3|1|0) |
- 1: | Hydroxyphenylpyruvate reductase [1.1.1.237] | (0|0) |
(0|0|0) |
- 1: | Hydroxypyruvate reductase [1.1.1.81] | (1|2) |
(1|1|0) |
- 1: | IMP dehydrogenase [1.1.1.205] | (2|2) |
(2|2|0) |
- 1: | Indanol dehydrogenase [1.1.1.112] | (1|1) |
(1|0|0) |
- 1: | Indole-3-acetaldehyde reductase (NADH) [1.1.1.190] | (0|0) |
(0|0|0) |
- 1: | Indole-3-acetaldehyde reductase (NADPH) [1.1.1.191] | (0|0) |
(0|0|0) |
- 1: | Indolelactate dehydrogenase [1.1.1.110] | (0|0) |
(0|0|0) |
- 1: | Inositol 2-dehydrogenase [1.1.1.18] | (1|2) |
(1|1|0) |
- 1: | Isocitrate dehydrogenase (NAD(+)) [1.1.1.41] | (1|1) |
(1|0|0) |
- 1: | Isocitrate dehydrogenase (NADP(+)) [1.1.1.42] | (1|1) |
(1|0|0) |
- 1: | Isocitrate--homoisocitrate dehydrogenase [1.1.1.286] | (0|0) |
(0|0|0) |
- 1: | Isopiperitenol dehydrogenase [1.1.1.223] | (0|0) |
(0|0|0) |
- 1: | Isopropanol dehydrogenase (NADP(+)) [1.1.1.80] | (0|0) |
(0|0|0) |
- 1: | Ketol-acid reductoisomerase [1.1.1.86] | (2|2) |
(2|2|1) |
- 1: | L-arabinitol 2-dehydrogenase [1.1.1.13] | (0|0) |
(0|0|0) |
- 1: | L-arabinitol 4-dehydrogenase [1.1.1.12] | (0|0) |
(0|0|0) |
- 1: | L-arabinose 1-dehydrogenase [1.1.1.46] | (0|0) |
(0|0|0) |
- 1: | L-galactose 1-dehydrogenase [1.1.1.316] | (0|0) |
(0|0|0) |
- 1: | L-glycol dehydrogenase [1.1.1.185] | (0|0) |
(0|0|0) |
- 1: | L-gulonate 3-dehydrogenase [1.1.1.45] | (1|2) |
(1|1|0) |
- 1: | L-iditol 2-dehydrogenase [1.1.1.14] | (1|2) |
(1|1|0) |
- 1: | L-idonate 5-dehydrogenase [1.1.1.264] | (0|0) |
(0|0|0) |
- 1: | L-idonate dehydrogenase [1.1.1.n8] | (0|0) |
(0|0|0) |
- 1: | L-lactate dehydrogenase [1.1.1.27] | (2|2) |
(2|1|0) |
- 1: | L-rhamnose 1-dehydrogenase [1.1.1.173] | (0|0) |
(0|0|0) |
- 1: | L-threonate 3-dehydrogenase [1.1.1.129] | (0|0) |
(0|0|0) |
- 1: | L-threonine 3-dehydrogenase [1.1.1.103] | (2|2) |
(2|1|0) |
- 1: | L-xylose 1-dehydrogenase [1.1.1.113] | (0|0) |
(0|0|0) |
- 1: | L-xylulose reductase [1.1.1.10] | (0|1) |
(0|0|0) |
- 1: | Lactaldehyde reductase [1.1.1.77] | (0|0) |
(0|0|0) |
- 1: | Lactaldehyde reductase (NADPH) [1.1.1.55] | (0|0) |
(0|0|0) |
- 1: | Limonene-1,2-diol dehydrogenase [1.1.1.297] | (0|0) |
(0|0|0) |
- 1: | Long-chain-3-hydroxyacyl-CoA dehydrogenase [1.1.1.211] | (0|0) |
(1|2|2) |
- 1: | Long-chain-alcohol dehydrogenase [1.1.1.192] | (0|0) |
(0|0|0) |
- 1: | Malate dehydrogenase [1.1.1.37] | (2|2) |
(2|1|0) |
- 1: | Malate dehydrogenase (NAD(P)(+)) [1.1.1.299] | (0|0) |
(0|0|0) |
- 1: | Malate dehydrogenase (NADP(+)) [1.1.1.82] | (1|2) |
(1|1|0) |
- 1: | Malate dehydrogenase (decarboxylating) [1.1.1.39] | (0|0) |
(1|0|0) |
- 1: | Malate dehydrogenase (oxaloacetate-decarboxylating [1.1.1.40] | (1|3) |
(1|1|1) |
- 1: | Malate dehydrogenase (oxaloacetate-decarboxylating [1.1.1.38] | (1|2) |
(1|0|0) |
- 1: | Mannitol 2-dehydrogenase [1.1.1.67] | (1|2) |
(1|1|0) |
- 1: | Mannitol 2-dehydrogenase (NADP(+)) [1.1.1.138] | (0|0) |
(0|0|0) |
- 1: | Mannitol dehydrogenase [1.1.1.255] | (1|2) |
(1|1|0) |
- 1: | Mannitol-1-phosphate 5-dehydrogenase [1.1.1.17] | (2|1) |
(2|1|0) |
- 1: | Mannose-6-phosphate 6-reductase [1.1.1.224] | (0|0) |
(0|0|0) |
- 1: | Mannuronate reductase [1.1.1.131] | (0|0) |
(0|0|0) |
- 1: | Methanol dehydrogenase [1.1.1.244] | (0|0) |
(0|0|0) |
- 1: | Methylglyoxal reductase (NADH-dependent) [1.1.1.78] | (0|0) |
(0|0|0) |
- 1: | Methylglyoxal reductase (NADPH-dependent) [1.1.1.283] | (0|0) |
(0|0|0) |
- 1: | Mevaldate reductase [1.1.1.32] | (0|0) |
(0|0|0) |
- 1: | Mevaldate reductase (NADPH) [1.1.1.33] | (0|0) |
(0|0|0) |
- 1: | Momilactone-A synthase [1.1.1.295] | (0|0) |
(0|0|0) |
- 1: | Morphine 6-dehydrogenase [1.1.1.218] | (0|0) |
(1|0|0) |
- 1: | N-acetylhexosamine 1-dehydrogenase [1.1.1.240] | (0|0) |
(0|0|0) |
- 1: | N-acylmannosamine 1-dehydrogenase [1.1.1.233] | (0|0) |
(0|0|0) |
- 1: | NADP-retinol dehydrogenase [1.1.1.300] | (0|1) |
(0|0|0) |
- 1: | Octanol dehydrogenase [1.1.1.73] | (0|0) |
(0|0|0) |
- 1: | Omega-hydroxydecanoate dehydrogenase [1.1.1.66] | (0|0) |
(0|0|0) |
- 1: | Oxaloglycolate reductase (decarboxylating) [1.1.1.92] | (0|0) |
(0|0|0) |
- 1: | Pantoate 4-dehydrogenase [1.1.1.106] | (0|0) |
(0|0|0) |
- 1: | Perakine reductase [1.1.1.317] | (0|0) |
(0|0|0) |
- 1: | Perillyl-alcohol dehydrogenase [1.1.1.144] | (0|0) |
(0|0|0) |
- 1: | Phosphogluconate 2-dehydrogenase [1.1.1.43] | (0|0) |
(0|0|0) |
- 1: | Phosphogluconate dehydrogenase (decarboxylating) [1.1.1.44] | (1|2) |
(1|1|0) |
- 1: | Phosphoglycerate dehydrogenase [1.1.1.95] | (3|4) |
(3|4|3) |
- 1: | Phosphonoacetaldehyde reductase (NADH) [1.1.1.309] | (0|0) |
(0|0|0) |
- 1: | Propanediol-phosphate dehydrogenase [1.1.1.7] | (0|0) |
(0|0|0) |
- 1: | Prostaglandin-E(2) 9-reductase [1.1.1.189] | (0|1) |
(0|0|0) |
- 1: | Prostaglandin-F synthase [1.1.1.188] | (0|0) |
(1|0|0) |
- 1: | Pterocarpin synthase [1.1.1.246] | (0|0) |
(0|0|0) |
- 1: | Pyridoxal 4-dehydrogenase [1.1.1.107] | (0|0) |
(0|0|0) |
- 1: | Pyridoxine 4-dehydrogenase [1.1.1.65] | (0|0) |
(1|0|0) |
- 1: | Quinate dehydrogenase [1.1.1.24] | (1|1) |
(1|1|0) |
- 1: | Quinate/shikimate dehydrogenase [1.1.1.282] | (1|2) |
(1|1|0) |
- 1: | Ribitol 2-dehydrogenase [1.1.1.56] | (0|0) |
(0|0|0) |
- 1: | Ribitol-5-phosphate 2-dehydrogenase [1.1.1.137] | (0|0) |
(0|0|0) |
- 1: | Ribose 1-dehydrogenase (NADP(+)) [1.1.1.115] | (0|0) |
(0|0|0) |
- 1: | S-(hydroxymethyl)glutathione dehydrogenase [1.1.1.284] | (1|2) |
(1|2|1) |
- 1: | S-(hydroxymethyl)mycothiol dehydrogenase [1.1.1.306] | (0|0) |
(0|0|0) |
- 1: | Salutaridine reductase (NADPH) [1.1.1.248] | (0|0) |
(0|0|0) |
- 1: | Sepiapterin reductase [1.1.1.153] | (0|1) |
(0|0|0) |
- 1: | Sequoyitol dehydrogenase [1.1.1.143] | (0|0) |
(0|0|0) |
- 1: | Serine 3-dehydrogenase [1.1.1.276] | (0|0) |
(0|0|0) |
- 1: | Shikimate dehydrogenase [1.1.1.25] | (6|6) |
(6|5|4) |
- 1: | Sorbitol-6-phosphate 2-dehydrogenase [1.1.1.140] | (0|0) |
(0|0|0) |
- 1: | Sorbose 5-dehydrogenase (NADP(+)) [1.1.1.123] | (0|0) |
(0|0|0) |
- 1: | Sorbose reductase [1.1.1.289] | (0|0) |
(0|0|0) |
- 1: | Sterol-4-alpha-carboxylate 3-dehydrogenase (decarb [1.1.1.170] | (0|1) |
(0|0|0) |
- 1: | Succinic semialdehyde reductase [1.1.1.n11] | (0|0) |
(1|0|0) |
- 1: | Sulcatone reductase [1.1.1.260] | (0|0) |
(0|0|0) |
- 1: | Sulfoacetaldehyde reductase [1.1.1.313] | (0|0) |
(0|0|0) |
- 1: | Sulfopropanediol 3-dehydrogenase [1.1.1.308] | (0|0) |
(0|0|0) |
- 1: | Tagaturonate reductase [1.1.1.58] | (1|2) |
(1|1|0) |
- 1: | Tartrate dehydrogenase [1.1.1.93] | (1|1) |
(1|0|0) |
- 1: | Testosterone 17-beta-dehydrogenase [1.1.1.63] | (0|1) |
(0|0|0) |
- 1: | Testosterone 17-beta-dehydrogenase (NADP(+)) [1.1.1.64] | (0|0) |
(0|0|0) |
- 1: | Tetrahydroxynaphthalene reductase [1.1.1.252] | (0|0) |
(0|0|0) |
- 1: | Transferred entry: 1.1.1.131 [1.1.1.180] | (0|0) |
(0|0|0) |
- 1: | Transferred entry: 1.1.1.198, 1.1.1.227 and 1.1.1. [1.1.1.182] | (0|0) |
(0|0|0) |
- 1: | Transferred entry: 1.1.1.21 [1.1.1.139] | (0|0) |
(0|0|0) |
- 1: | Transferred entry: 1.1.1.300 [1.1.1.n2] | (0|0) |
(0|0|0) |
- 1: | Transferred entry: 1.1.1.301 [1.1.1.n10] | (0|0) |
(0|0|0) |
- 1: | Transferred entry: 1.1.1.303 and 1.1.1.304 [1.1.1.5] | (0|0) |
(0|0|0) |
- 1: | Transferred entry: 1.1.1.305 [1.1.1.n1] | (0|0) |
(0|0|0) |
- 1: | Transferred entry: 1.1.1.86 [1.1.1.89] | (0|0) |
(0|0|0) |
- 1: | Transferred entry: 1.1.1.87 [1.1.1.155] | (0|0) |
(0|0|0) |
- 1: | Transferred entry: 1.17.1.4 [1.1.1.204] | (0|0) |
(0|0|0) |
- 1: | Transferred entry: 1.2.1.3 [1.1.1.70] | (0|0) |
(0|0|0) |
- 1: | Transferred entry: 1.3.1.28 [1.1.1.109] | (0|0) |
(0|0|0) |
- 1: | Transferred entry: 1.3.1.69 [1.1.1.242] | (0|0) |
(0|0|0) |
- 1: | Transferred entry: 1.5.1.20 [1.1.1.68] | (0|0) |
(0|0|0) |
- 1: | Transferred entry: 1.5.1.20 [1.1.1.171] | (0|0) |
(0|0|0) |
- 1: | Transferred entry: 1.5.1.33 [1.1.1.253] | (0|0) |
(0|0|0) |
- 1: | Transferred entry: 2.5.1.46 [1.1.1.249] | (0|0) |
(0|0|0) |
- 1: | Tropinone reductase I [1.1.1.206] | (0|0) |
(0|0|0) |
- 1: | Tropinone reductase II [1.1.1.236] | (0|0) |
(0|0|0) |
- 1: | UDP-N-acetyl-D-mannosamine dehydrogenase [1.1.1.n3] | (2|3) |
(2|2|1) |
- 1: | UDP-N-acetylglucosamine 6-dehydrogenase [1.1.1.136] | (0|0) |
(0|0|0) |
- 1: | UDP-N-acetylmuramate dehydrogenase [1.1.1.158] | (2|2) |
(2|1|0) |
- 1: | UDP-glucose 6-dehydrogenase [1.1.1.22] | (2|3) |
(2|2|1) |
- 1: | UDP-glucuronic acid oxidase (UDP-4-keto-hexauronic [1.1.1.305] | (2|3) |
(2|2|1) |
- 1: | Ureidoglycolate dehydrogenase [1.1.1.154] | (0|0) |
(0|0|0) |
- 1: | Uronate dehydrogenase [1.1.1.203] | (0|0) |
(0|0|0) |
- 1: | Vellosimine dehydrogenase [1.1.1.273] | (0|0) |
(0|0|0) |
- 1: | Vomifoliol dehydrogenase [1.1.1.221] | (0|0) |
(0|0|0) |
- 1: | Xanthoxin dehydrogenase [1.1.1.288] | (0|0) |
(0|0|0) |
- 1: | dTDP-4-dehydro-6-deoxyglucose reductase [1.1.1.266] | (0|0) |
(0|0|0) |
- 1: | dTDP-4-dehydrorhamnose reductase [1.1.1.133] | (0|1) |
(0|0|0) |
- 1: | dTDP-6-deoxy-L-talose 4-dehydrogenase [1.1.1.134] | (0|0) |
(0|0|0) |
- 1: | dTDP-galactose 6-dehydrogenase [1.1.1.186] | (0|0) |
(0|0|0) |
- 1: | sn-glycerol-1-phosphate dehydrogenase [1.1.1.261] | (1|1) |
(1|0|0) |
Trees by TreeVector
A presence/absence matrix is generated using protein domains and supradomains
for all genomes in SUPERFAMILY. The RAxML
software is used to produce a single, large tree topology using
heuristic parsimony methods. Genome combinations, or specific clades, can be displayed as
if individual trees had been produced. However, this data is extracted from the single
large tree. This produces a higher quality topology than if the trees had been produced
on their own, and allows the trees to be displayed instantly.
Trees by TreeVector
A presence/absence matrix is generated using protein domains and supradomains
for all genomes in SUPERFAMILY. The RAxML
software is used to produce a single, large tree topology using
heuristic parsimony methods. Genome combinations, or specific clades, can be displayed as
if individual trees had been produced. However, this data is extracted from the single
large tree. This produces a higher quality topology than if the trees had been produced
on their own, and allows the trees to be displayed instantly.