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Nucleotidyltransferases
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Enzyme Commission (EC)
Each enzyme is allocated a four-digit EC number, the first three digits of which define the reaction catalysed and the fourth of which is a unique identifier (serial number). Each enzyme is also assigned a systematic name that uniquely defines the reaction catalysed. To navigate hierarchical structure of EC, we display all parental EC terms to the current EC term of interest ordered by their shortest distances to the current term. Also, only direct children EC terms of the current EC term are listed.
Structural Classification of Proteins (SCOP)
SCOP classifies evolutionary-related domains into Superfamily level and Family level. Accordingly, we have generated the domain-centric EC annotations for each of the three concepts at each of the two domain levels.
Structural Domain Enzyme Commission Ontology (SDEO)
As domain-centric ontology, SDEO only refers to those EC terms which are the most informative to annotate SCOP domains.
EC annotations for SCOP domains
For details, please visit Documentation: EC annotations for SCOP domains. Therein, we provide several relevant files ( Data Availability) for the download, including an annotation file (i.e., Domain2EC.txt) and the corresponding ontology (i.e., SDEO.txt).
Supra-domain Enzyme Commission Ontology (SPEO)
As an extension, SPEO includes those EC terms which are the most informative to annotate supra-domains and individual SCOP domains at the Superfamily level.
EC annotations for Supra-domains
For details, please visit Documentation: EC annotations for Supra-domains. Therein, we provide several relevant files ( Data Availability) for the download, including a annotation file (i.e., SP2EC.txt) and an ontology (i.e., SPEO.txt). For the sake of being browsable, listed below are those supra-domains (single, dual, triple, quad).
Jump to [ Top · EC Hierarchy · Superfamily · Family · Supra-domain ]
Root: EC Hierarchy (from IntEnz release 70)
Jump to [ Top · EC Hierarchy · Superfamily · Family · Supra-domain ]
Superfamily(show details)
Jump to [ Top · EC Hierarchy · Superfamily · Family · Supra-domain ]
Family(show details)
Family domains annotated to this (SDEO level: Least Informative)
Highlighted in gray are those with FDR_all>0.001
SCOP term |
FDR (all) |
Annotation (direct or inherited) |
Coronavirus NSP8-like | 0 | DIRECT |
DnaQ-like 3'-5' exonuclease | 0 | DIRECT |
Insert subdomain of RNA polymerase alpha subunit | 0 | DIRECT |
Nsp15 C-terminal domain-like | 0 | DIRECT |
Molybdenum cofactor biosynthesis protein MoeB | 0 | DIRECT |
Class II viral fusion proteins C-terminal domain | 0 | DIRECT |
RBP11/RpoL | 0 | DIRECT |
TBP-associated factors, TAFs | 0 | DIRECT |
Retrovirus zinc finger-like domains | 0 | DIRECT |
5' to 3' exonuclease catalytic domain | 0 | DIRECT |
Replicase NSP9 | 0 | DIRECT |
Retrovirus capsid protein C-terminal domain | 0 | DIRECT |
UDP-glucose pyrophosphorylase | 0 | DIRECT |
AF1531-like | 0 | DIRECT |
Poly(A) polymerase, PAP, N-terminal domain | 0 | DIRECT |
PAPS reductase-like | 0 | DIRECT |
Poly A polymerase C-terminal region-like | 0 | DIRECT |
Adenylyltransferase | 0 | DIRECT |
Viral proteases | 0 | DIRECT |
RNA helicase | 0 | DIRECT |
DNA polymerase I | 0 | DIRECT |
Poly(A) polymerase, PAP, middle domain | 0 | DIRECT |
SP1160 C-terminal domain-like | 0 | DIRECT |
IpsF-like | 0 | DIRECT |
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 0 | DIRECT |
RPB6 | 0 | DIRECT |
N-terminal Zn binding domain of HIV integrase | 0 | DIRECT |
ATP sulfurylase C-terminal domain | 0 | DIRECT |
glucose-1-phosphate thymidylyltransferase | 0 | DIRECT |
Archaeal tRNA CCA-adding enzyme substrate-binding domain | 0 | DIRECT |
DNA polymerase beta, N-terminal domain-like | 0 | DIRECT |
Immunodeficiency virus matrix proteins | 0 | DIRECT |
mannose-1-phosphate guanylyl transferase | 0 | DIRECT |
PHP domain | 0 | DIRECT |
Nsp15 N-terminal domain-like | 0 | DIRECT |
Poly A polymerase head domain-like | 0 | DIRECT |
C-terminal domain of RNA polymerase alpha subunit | 0 | DIRECT |
DNA polymerase III clamp loader subunits, C-terminal domain | 0 | DIRECT |
Fic-like | 0 | DIRECT |
RNA-polymerase beta-prime | 0 | DIRECT |
RNA polymerase subunit RPB10 | 0 | DIRECT |
Lesion bypass DNA polymerase (Y-family), catalytic domain | 0 | DIRECT |
RNA-dependent RNA-polymerase | 0 | DIRECT |
Picornaviridae-like VP (VP1, VP2, VP3 and VP4) | 0 | DIRECT |
Ribonuclease PH domain 2-like | 0 | DIRECT |
RPB5 | 0 | DIRECT |
HTLV-II matrix protein | 0 | DIRECT |
Flavivirus capsid protein C | 0 | DIRECT |
DNA polymerase III, beta subunit | 0 | DIRECT |
Viral glycoprotein, central and dimerisation domains | 0 | DIRECT |
RNA-polymerase beta | 0 | DIRECT |
Elongation factors | 0 | DIRECT |
Soluble domain of poliovirus core protein 3a | 0 | DIRECT |
RNA editing terminal uridyl transferase 2, RET2, domain 2 | 0 | DIRECT |
DNA polymerase beta-like | 0 | DIRECT |
Glutamine synthase adenylyltransferase GlnE, domain 2 | 0 | DIRECT |
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 | 0 | DIRECT |
Archaeal tRNA CCA-adding enzyme catalytic domain | 0 | DIRECT |
MogA-like | 0 | DIRECT |
GGDEF domain | 0 | DIRECT |
mRNA capping enzyme | 0 | DIRECT |
Poly(A) polymerase, PAP, C-terminal domain | 0 | DIRECT |
Retroviral protease (retropepsin) | 0 | DIRECT |
Macro domain | 0 | DIRECT |
Coronavirus NSP7-like | 0 | DIRECT |
MM2497-like | 0 | DIRECT |
Reverse transcriptase | 0 | DIRECT |
5' to 3' exonuclease, C-terminal subdomain | 0 | DIRECT |
Cold shock DNA-binding domain-like | 0 | DIRECT |
GlmU C-terminal domain-like | 0 | DIRECT |
GlnE-like domain | 0 | DIRECT |
DNA polymerase beta-like, second domain | 0 | DIRECT |
Lesion bypass DNA polymerase (Y-family), little finger domain | 0 | DIRECT |
Caliciviridae-like VP | 0 | DIRECT |
Ribonuclease PH domain 1-like | 0 | DIRECT |
Coronavirus NSP10-like | 0 | DIRECT |
Transcriptional factor domain | 0 | DIRECT |
ATP sulfurylase catalytic domain | 0 | DIRECT |
Cytidylyltransferase | 0 | DIRECT |
Poxvirus poly(A) polymerase catalytic subunit-like | 0 | DIRECT |
T7 RNA polymerase | 0 | DIRECT |
RNA polymerase alpha subunit dimerisation domain | 0 | DIRECT |
Archaeal tRNA CCA-adding enzyme | 0 | DIRECT |
Retroviral integrase, catalytic domain | 0 | DIRECT |
Retrovirus capsid protein, N-terminal core domain | 0 | DIRECT |
Eukaryotic type KH-domain (KH-domain type I) | 0 | DIRECT |
Viral cysteine protease of trypsin fold | 0 | DIRECT |
Hexose-1-phosphate uridylyltransferase | 0 | DIRECT |
DNA-binding domain of retroviral integrase | 0 | DIRECT |
RNA polymerase omega subunit | 0 | DIRECT |
mRNA cap methylase | 0 | DIRECT |
ATP sulfurylase N-terminal domain | 0 | DIRECT |
Cytidylytransferase | 0 | DIRECT |
NSP3A-like | 0.000000000000001897 | DIRECT |
G proteins | 0.0000000000002694 | DIRECT |
Ribonuclease H | 0.000000000001101 | DIRECT |
LplA-like | 0.000000008582 | DIRECT |
Intein (protein splicing domain) | 0.0000001317 | DIRECT |
AlkB-like | 0.0000005869 | DIRECT |
Probable phosphatase YrbI | 0.000001417 | DIRECT |
MoeA C-terminal domain-like | 0.00000865 | DIRECT |
MoeA N-terminal region -like | 0.00001319 | DIRECT |
MoeA central domain-like | 0.00001319 | DIRECT |
Canonical RBD | 0.01789 | INHERITED FROM: RNA uridylyltransferase || Polynucleotide adenylyltransferase |
mRNA cap (Guanine N-7) methyltransferase | 0.02402 | INHERITED FROM: mRNA guanylyltransferase |
Ribonuclease Rh-like | 0.03694 | INHERITED FROM: RNA-directed RNA polymerase |
ATP-dependent riboflavin kinase-like | 0.6278 | INHERITED FROM: FAD synthetase |
dUTPase-like | 1 | INHERITED FROM: RNA-directed DNA polymerase |
Extended AAA-ATPase domain | 1 | INHERITED FROM: DNA-directed DNA polymerase |
DNA ligase/mRNA capping enzyme postcatalytic domain | 1 | INHERITED FROM: mRNA guanylyltransferase |
Adenosine-5'phosphosulfate kinase (APS kinase) | 1 | INHERITED FROM: Sulfate adenylyltransferase |
SCOP term |
FDR (all) |
Annotation (direct or inherited) |
Coronavirus NSP8-like | 0 | Direct |
DnaQ-like 3'-5' exonuclease | 0 | Direct |
Insert subdomain of RNA polymerase alpha subunit | 0 | Direct |
Nsp15 C-terminal domain-like | 0 | Direct |
Molybdenum cofactor biosynthesis protein MoeB | 0 | Direct |
Class II viral fusion proteins C-terminal domain | 0 | Direct |
RBP11/RpoL | 0 | Direct |
TBP-associated factors, TAFs | 0 | Direct |
Retrovirus zinc finger-like domains | 0 | Direct |
5' to 3' exonuclease catalytic domain | 0 | Direct |
Replicase NSP9 | 0 | Direct |
Retrovirus capsid protein C-terminal domain | 0 | Direct |
UDP-glucose pyrophosphorylase | 0 | Direct |
AF1531-like | 0 | Direct |
Poly(A) polymerase, PAP, N-terminal domain | 0 | Direct |
PAPS reductase-like | 0 | Direct |
Poly A polymerase C-terminal region-like | 0 | Direct |
Adenylyltransferase | 0 | Direct |
Viral proteases | 0 | Direct |
RNA helicase | 0 | Direct |
DNA polymerase I | 0 | Direct |
Poly(A) polymerase, PAP, middle domain | 0 | Direct |
SP1160 C-terminal domain-like | 0 | Direct |
IpsF-like | 0 | Direct |
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 0 | Direct |
RPB6 | 0 | Direct |
N-terminal Zn binding domain of HIV integrase | 0 | Direct |
ATP sulfurylase C-terminal domain | 0 | Direct |
glucose-1-phosphate thymidylyltransferase | 0 | Direct |
Archaeal tRNA CCA-adding enzyme substrate-binding domain | 0 | Direct |
DNA polymerase beta, N-terminal domain-like | 0 | Direct |
Immunodeficiency virus matrix proteins | 0 | Direct |
mannose-1-phosphate guanylyl transferase | 0 | Direct |
PHP domain | 0 | Direct |
Nsp15 N-terminal domain-like | 0 | Direct |
Poly A polymerase head domain-like | 0 | Direct |
C-terminal domain of RNA polymerase alpha subunit | 0 | Direct |
DNA polymerase III clamp loader subunits, C-terminal domain | 0 | Direct |
Fic-like | 0 | Direct |
RNA-polymerase beta-prime | 0 | Direct |
RNA polymerase subunit RPB10 | 0 | Direct |
Lesion bypass DNA polymerase (Y-family), catalytic domain | 0 | Direct |
RNA-dependent RNA-polymerase | 0 | Direct |
Picornaviridae-like VP (VP1, VP2, VP3 and VP4) | 0 | Direct |
Ribonuclease PH domain 2-like | 0 | Direct |
RPB5 | 0 | Direct |
HTLV-II matrix protein | 0 | Direct |
Flavivirus capsid protein C | 0 | Direct |
DNA polymerase III, beta subunit | 0 | Direct |
Viral glycoprotein, central and dimerisation domains | 0 | Direct |
RNA-polymerase beta | 0 | Direct |
Elongation factors | 0 | Direct |
Soluble domain of poliovirus core protein 3a | 0 | Direct |
RNA editing terminal uridyl transferase 2, RET2, domain 2 | 0 | Direct |
DNA polymerase beta-like | 0 | Direct |
Glutamine synthase adenylyltransferase GlnE, domain 2 | 0 | Direct |
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 | 0 | Direct |
Archaeal tRNA CCA-adding enzyme catalytic domain | 0 | Direct |
MogA-like | 0 | Direct |
GGDEF domain | 0 | Direct |
mRNA capping enzyme | 0 | Direct |
Poly(A) polymerase, PAP, C-terminal domain | 0 | Direct |
Retroviral protease (retropepsin) | 0 | Direct |
Macro domain | 0 | Direct |
Coronavirus NSP7-like | 0 | Direct |
MM2497-like | 0 | Direct |
Reverse transcriptase | 0 | Direct |
5' to 3' exonuclease, C-terminal subdomain | 0 | Direct |
Cold shock DNA-binding domain-like | 0 | Direct |
GlmU C-terminal domain-like | 0 | Direct |
GlnE-like domain | 0 | Direct |
DNA polymerase beta-like, second domain | 0 | Direct |
Lesion bypass DNA polymerase (Y-family), little finger domain | 0 | Direct |
Caliciviridae-like VP | 0 | Direct |
Ribonuclease PH domain 1-like | 0 | Direct |
Coronavirus NSP10-like | 0 | Direct |
Transcriptional factor domain | 0 | Direct |
ATP sulfurylase catalytic domain | 0 | Direct |
Cytidylyltransferase | 0 | Direct |
Poxvirus poly(A) polymerase catalytic subunit-like | 0 | Direct |
T7 RNA polymerase | 0 | Direct |
RNA polymerase alpha subunit dimerisation domain | 0 | Direct |
Archaeal tRNA CCA-adding enzyme | 0 | Direct |
Retroviral integrase, catalytic domain | 0 | Direct |
Retrovirus capsid protein, N-terminal core domain | 0 | Direct |
Eukaryotic type KH-domain (KH-domain type I) | 0 | Direct |
Viral cysteine protease of trypsin fold | 0 | Direct |
Hexose-1-phosphate uridylyltransferase | 0 | Direct |
DNA-binding domain of retroviral integrase | 0 | Direct |
RNA polymerase omega subunit | 0 | Direct |
mRNA cap methylase | 0 | Direct |
ATP sulfurylase N-terminal domain | 0 | Direct |
Cytidylytransferase | 0 | Direct |
NSP3A-like | 0.000000000000001897 | Direct |
G proteins | 0.0000000000002694 | Direct |
Ribonuclease H | 0.000000000001101 | Direct |
LplA-like | 0.000000008582 | Direct |
Intein (protein splicing domain) | 0.0000001317 | Direct |
AlkB-like | 0.0000005869 | Direct |
Probable phosphatase YrbI | 0.000001417 | Direct |
MoeA C-terminal domain-like | 0.00000865 | Direct |
MoeA N-terminal region -like | 0.00001319 | Direct |
MoeA central domain-like | 0.00001319 | Direct |
Canonical RBD | 0.01789 | Inherited |
mRNA cap (Guanine N-7) methyltransferase | 0.02402 | Inherited |
Ribonuclease Rh-like | 0.03694 | Inherited |
ATP-dependent riboflavin kinase-like | 0.6278 | Inherited |
dUTPase-like | 1 | Inherited |
Extended AAA-ATPase domain | 1 | Inherited |
DNA ligase/mRNA capping enzyme postcatalytic domain | 1 | Inherited |
Adenosine-5'phosphosulfate kinase (APS kinase) | 1 | Inherited |
Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this EC term
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Trees by TreeVector
A presence/absence matrix is generated using protein domains and supradomains
for all genomes in SUPERFAMILY. The RAxML
software is used to produce a single, large tree topology using
heuristic parsimony methods. Genome combinations, or specific clades, can be displayed as
if individual trees had been produced. However, this data is extracted from the single
large tree. This produces a higher quality topology than if the trees had been produced
on their own, and allows the trees to be displayed instantly.
Jump to [ Top · EC Hierarchy · Superfamily · Family · Supra-domain ]
Supra-domain (including individual superfamily)
(show details)
Supra-domains annotated to this EC term (SPEO level: Least Informative)
Highlighted in gray are those with FDR>0.001
Supra-domain (Single) |
FDR (all) |
Annotation (direct or inherited) |
IpsF-like | 0 | DIRECT |
Nucleotidylyl transferase | 0 | DIRECT |
AF1531-like | 0 | DIRECT |
N-terminal Zn binding domain of HIV integrase | 0 | DIRECT |
RNA polymerase subunits | 0 | DIRECT |
Molybdenum cofactor biosynthesis proteins | 0 | DIRECT |
Coronavirus NSP8-like | 0 | DIRECT |
Ribonuclease H-like | 0 | DIRECT |
RPB6/omega subunit-like | 0 | DIRECT |
SufE/NifU | 0 | DIRECT |
Trimeric LpxA-like enzymes | 0 | DIRECT |
Acid proteases | 0 | DIRECT |
PAP/Archaeal CCA-adding enzyme, C-terminal domain | 0 | DIRECT |
Retroviral matrix proteins | 0 | DIRECT |
C-terminal domain of RNA polymerase alpha subunit | 0 | DIRECT |
PsbU/PolX domain-like | 0 | DIRECT |
Soluble domain of poliovirus core protein 3a | 0 | DIRECT |
RBP11-like subunits of RNA polymerase | 0 | DIRECT |
Retrovirus zinc finger-like domains | 0 | DIRECT |
Nucleotide-diphospho-sugar transferases | 0 | DIRECT |
DNA polymerase beta, N-terminal domain-like | 0 | DIRECT |
Nucleic acid-binding proteins | 0 | DIRECT |
RNA polymerase subunit RPB10 | 0 | DIRECT |
Histone-fold | 0 | DIRECT |
DNA clamp | 0 | DIRECT |
HD-domain/PDEase-like | 0 | DIRECT |
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 | 0 | DIRECT |
Poly(A) polymerase catalytic subunit-like | 0 | DIRECT |
ACT-like | 0 | DIRECT |
Trypsin-like serine proteases | 0 | DIRECT |
Positive stranded ssRNA viruses | 0 | DIRECT |
N-terminal, heterodimerisation domain of RBP7 (RpoE) | 0 | DIRECT |
Replicase NSP9 | 0 | DIRECT |
Lesion bypass DNA polymerase (Y-family), little finger domain | 0 | DIRECT |
DNA-binding domain of retroviral integrase | 0 | DIRECT |
DNA polymerase III chi subunit | 0 | DIRECT |
Flavivirus capsid protein C | 0 | DIRECT |
Nucleotidyltransferase substrate binding subunit/domain | 0 | DIRECT |
PIN domain-like | 0 | DIRECT |
Zinc finger domain of DNA polymerase-alpha | 0 | DIRECT |
post-AAA+ oligomerization domain-like | 0 | DIRECT |
Ribonuclease PH domain 2-like | 0 | DIRECT |
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 0 | DIRECT |
EndoU-like | 0 | DIRECT |
Retrovirus capsid protein, N-terminal core domain | 0 | DIRECT |
Nucleotidyltransferase | 0 | DIRECT |
PHP domain-like | 0 | DIRECT |
beta and beta-prime subunits of DNA dependent RNA-polymerase | 0 | DIRECT |
Viral leader polypeptide zinc finger | 0 | DIRECT |
Insert subdomain of RNA polymerase alpha subunit | 0 | DIRECT |
Eukaryotic type KH-domain (KH-domain type I) | 0 | DIRECT |
Activating enzymes of the ubiquitin-like proteins | 0 | DIRECT |
Coronavirus NSP10-like | 0 | DIRECT |
5' to 3' exonuclease, C-terminal subdomain | 0 | DIRECT |
Retrovirus capsid dimerization domain-like | 0 | DIRECT |
Ribosomal protein S5 domain 2-like | 0 | DIRECT |
Coronavirus NSP7-like | 0 | DIRECT |
PAP/OAS1 substrate-binding domain | 0 | DIRECT |
DNA/RNA polymerases | 0 | DIRECT |
Viral glycoprotein, central and dimerisation domains | 0 | DIRECT |
Poly A polymerase C-terminal region-like | 0 | DIRECT |
RPB5-like RNA polymerase subunit | 0 | DIRECT |
Fic-like | 0 | DIRECT |
Macro domain-like | 0.00000000000000347 | DIRECT |
NSP3A-like | 0.000000000000006914 | DIRECT |
HIT-like | 0.00000000001362 | DIRECT |
Hedgehog/intein (Hint) domain | 0.00000000001914 | DIRECT |
Homing endonucleases | 0.00000027 | DIRECT |
MoeA N-terminal region -like | 0.00002197 | DIRECT |
MoeA C-terminal domain-like | 0.00002197 | DIRECT |
SARS Nsp1-like | 0.00004814 | DIRECT |
Zinc beta-ribbon | 0.00008761 | DIRECT |
Adenine nucleotide alpha hydrolases-like | 0.0005406 | DIRECT |
Translation proteins | 0.0005752 | DIRECT |
beta-beta-alpha zinc fingers | 0.000577 | DIRECT |
CYTH-like phosphatases | 0.001435 | INHERITED FROM: mRNA guanylyltransferase |
TPR-like | 0.003191 | INHERITED FROM: Adenosine monophosphate-protein transferase |
Nucleotide cyclase | 0.01671 | INHERITED FROM: Diguanylate cyclase |
E set domains | 0.02028 | INHERITED FROM: RNA-directed RNA polymerase |
RNA-binding domain, RBD | 0.02747 | INHERITED FROM: RNA uridylyltransferase || Polynucleotide adenylyltransferase |
Ribonuclease Rh-like | 0.04979 | INHERITED FROM: RNA-directed RNA polymerase |
Globin-like | 0.09768 | INHERITED FROM: Diguanylate cyclase |
DNase I-like | 0.601 | INHERITED FROM: RNA-directed DNA polymerase |
Clavaminate synthase-like | 0.6923 | INHERITED FROM: RNA-directed RNA polymerase |
SGNH hydrolase | 0.7889 | INHERITED FROM: N-acylneuraminate cytidylyltransferase |
lambda repressor-like DNA-binding domains | 0.9918 | INHERITED FROM: Nicotinamide-nucleotide adenylyltransferase |
BRCT domain | 1 | INHERITED FROM: DNA nucleotidylexotransferase |
dUTPase-like | 1 | INHERITED FROM: RNA-directed DNA polymerase |
DNA ligase/mRNA capping enzyme, catalytic domain | 1 | INHERITED FROM: mRNA guanylyltransferase |
Class II aaRS and biotin synthetases | 1 | INHERITED FROM: Lipoate--protein ligase |
HAD-like | 1 | INHERITED FROM: N-acylneuraminate cytidylyltransferase |
PUA domain-like | 1 | INHERITED FROM: Sulfate adenylyltransferase |
S-adenosyl-L-methionine-dependent methyltransferases | 1 | INHERITED FROM: RNA-directed RNA polymerase || mRNA guanylyltransferase |
(Phosphotyrosine protein) phosphatases II | 1 | INHERITED FROM: mRNA guanylyltransferase |
P-loop containing nucleoside triphosphate hydrolases | 1 | INHERITED FROM: Adenosylcobinamide-phosphate guanylyltransferase || RNA-directed RNA polymerase || Sulfate adenylyltransferase |
Riboflavin kinase-like | 1 | INHERITED FROM: FAD synthetase |
RmlC-like cupins | 1 | INHERITED FROM: Mannose-1-phosphate guanylyltransferase |
Cysteine proteinases | 1 | INHERITED FROM: RNA-directed RNA polymerase |
Supra-domain (Single) |
FDR (all) |
Annotation (direct or inherited) |
IpsF-like | 0 | Direct |
Nucleotidylyl transferase | 0 | Direct |
AF1531-like | 0 | Direct |
N-terminal Zn binding domain of HIV integrase | 0 | Direct |
RNA polymerase subunits | 0 | Direct |
Molybdenum cofactor biosynthesis proteins | 0 | Direct |
Coronavirus NSP8-like | 0 | Direct |
Ribonuclease H-like | 0 | Direct |
RPB6/omega subunit-like | 0 | Direct |
SufE/NifU | 0 | Direct |
Trimeric LpxA-like enzymes | 0 | Direct |
Acid proteases | 0 | Direct |
PAP/Archaeal CCA-adding enzyme, C-terminal domain | 0 | Direct |
Retroviral matrix proteins | 0 | Direct |
C-terminal domain of RNA polymerase alpha subunit | 0 | Direct |
PsbU/PolX domain-like | 0 | Direct |
Soluble domain of poliovirus core protein 3a | 0 | Direct |
RBP11-like subunits of RNA polymerase | 0 | Direct |
Retrovirus zinc finger-like domains | 0 | Direct |
Nucleotide-diphospho-sugar transferases | 0 | Direct |
DNA polymerase beta, N-terminal domain-like | 0 | Direct |
Nucleic acid-binding proteins | 0 | Direct |
RNA polymerase subunit RPB10 | 0 | Direct |
Histone-fold | 0 | Direct |
DNA clamp | 0 | Direct |
HD-domain/PDEase-like | 0 | Direct |
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 | 0 | Direct |
Poly(A) polymerase catalytic subunit-like | 0 | Direct |
ACT-like | 0 | Direct |
Trypsin-like serine proteases | 0 | Direct |
Positive stranded ssRNA viruses | 0 | Direct |
N-terminal, heterodimerisation domain of RBP7 (RpoE) | 0 | Direct |
Replicase NSP9 | 0 | Direct |
Lesion bypass DNA polymerase (Y-family), little finger domain | 0 | Direct |
DNA-binding domain of retroviral integrase | 0 | Direct |
DNA polymerase III chi subunit | 0 | Direct |
Flavivirus capsid protein C | 0 | Direct |
Nucleotidyltransferase substrate binding subunit/domain | 0 | Direct |
PIN domain-like | 0 | Direct |
Zinc finger domain of DNA polymerase-alpha | 0 | Direct |
post-AAA+ oligomerization domain-like | 0 | Direct |
Ribonuclease PH domain 2-like | 0 | Direct |
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 0 | Direct |
EndoU-like | 0 | Direct |
Retrovirus capsid protein, N-terminal core domain | 0 | Direct |
Nucleotidyltransferase | 0 | Direct |
PHP domain-like | 0 | Direct |
beta and beta-prime subunits of DNA dependent RNA-polymerase | 0 | Direct |
Viral leader polypeptide zinc finger | 0 | Direct |
Insert subdomain of RNA polymerase alpha subunit | 0 | Direct |
Eukaryotic type KH-domain (KH-domain type I) | 0 | Direct |
Activating enzymes of the ubiquitin-like proteins | 0 | Direct |
Coronavirus NSP10-like | 0 | Direct |
5' to 3' exonuclease, C-terminal subdomain | 0 | Direct |
Retrovirus capsid dimerization domain-like | 0 | Direct |
Ribosomal protein S5 domain 2-like | 0 | Direct |
Coronavirus NSP7-like | 0 | Direct |
PAP/OAS1 substrate-binding domain | 0 | Direct |
DNA/RNA polymerases | 0 | Direct |
Viral glycoprotein, central and dimerisation domains | 0 | Direct |
Poly A polymerase C-terminal region-like | 0 | Direct |
RPB5-like RNA polymerase subunit | 0 | Direct |
Fic-like | 0 | Direct |
Macro domain-like | 0.00000000000000347 | Direct |
NSP3A-like | 0.000000000000006914 | Direct |
HIT-like | 0.00000000001362 | Direct |
Hedgehog/intein (Hint) domain | 0.00000000001914 | Direct |
Homing endonucleases | 0.00000027 | Direct |
MoeA N-terminal region -like | 0.00002197 | Direct |
MoeA C-terminal domain-like | 0.00002197 | Direct |
SARS Nsp1-like | 0.00004814 | Direct |
Zinc beta-ribbon | 0.00008761 | Direct |
Adenine nucleotide alpha hydrolases-like | 0.0005406 | Direct |
Translation proteins | 0.0005752 | Direct |
beta-beta-alpha zinc fingers | 0.000577 | Direct |
CYTH-like phosphatases | 0.001435 | Inherited |
TPR-like | 0.003191 | Inherited |
Nucleotide cyclase | 0.01671 | Inherited |
E set domains | 0.02028 | Inherited |
RNA-binding domain, RBD | 0.02747 | Inherited |
Ribonuclease Rh-like | 0.04979 | Inherited |
Globin-like | 0.09768 | Inherited |
DNase I-like | 0.601 | Inherited |
Clavaminate synthase-like | 0.6923 | Inherited |
SGNH hydrolase | 0.7889 | Inherited |
lambda repressor-like DNA-binding domains | 0.9918 | Inherited |
BRCT domain | 1 | Inherited |
dUTPase-like | 1 | Inherited |
DNA ligase/mRNA capping enzyme, catalytic domain | 1 | Inherited |
Class II aaRS and biotin synthetases | 1 | Inherited |
HAD-like | 1 | Inherited |
PUA domain-like | 1 | Inherited |
S-adenosyl-L-methionine-dependent methyltransferases | 1 | Inherited |
(Phosphotyrosine protein) phosphatases II | 1 | Inherited |
P-loop containing nucleoside triphosphate hydrolases | 1 | Inherited |
Riboflavin kinase-like | 1 | Inherited |
RmlC-like cupins | 1 | Inherited |
Cysteine proteinases | 1 | Inherited |
(show details)
Supra-domains annotated to this EC term (SPEO level: Least Informative)
Highlighted in gray are those with FDR>0.001
Supra-domain (Duplex) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
47353,57756 47353 - Retrovirus capsid dimerization domain-like 57756 - Retrovirus zinc finger-like domains | 0 | DIRECT |
53098,53098 53098 - Ribonuclease H-like 53098 - Ribonuclease H-like | 0 | DIRECT |
56672,90234 56672 - DNA/RNA polymerases 90234 - Zinc finger domain of DNA polymerase-alpha | 0 | DIRECT |
56672,52540 56672 - DNA/RNA polymerases 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
81301,81891 81301 - Nucleotidyltransferase 81891 - Poly A polymerase C-terminal region-like | 0 | DIRECT |
48452,140931 48452 - TPR-like 140931 - Fic-like | 0 | DIRECT |
64484,64484 64484 - beta and beta-prime subunits of DNA dependent RNA-polymerase 64484 - beta and beta-prime subunits of DNA dependent RNA-polymerase | 0 | DIRECT |
55681,82649 55681 - Class II aaRS and biotin synthetases 82649 - SufE/NifU | 0 | DIRECT |
56983,81296 56983 - Viral glycoprotein, central and dimerisation domains 81296 - E set domains | 0 | DIRECT |
57756,50630 57756 - Retrovirus zinc finger-like domains 50630 - Acid proteases | 0 | DIRECT |
56672,51294 56672 - DNA/RNA polymerases 51294 - Hedgehog/intein (Hint) domain | 0 | DIRECT |
53335,52949 53335 - S-adenosyl-L-methionine-dependent methyltransferases 52949 - Macro domain-like | 0 | DIRECT |
54197,54197 54197 - HIT-like 54197 - HIT-like | 0 | DIRECT |
51283,46919 51283 - dUTPase-like 46919 - N-terminal Zn binding domain of HIV integrase | 0 | DIRECT |
56553,55257 56553 - Insert subdomain of RNA polymerase alpha subunit 55257 - RBP11-like subunits of RNA polymerase | 0 | DIRECT |
55257,47789 55257 - RBP11-like subunits of RNA polymerase 47789 - C-terminal domain of RNA polymerase alpha subunit | 0 | DIRECT |
52540,50447 52540 - P-loop containing nucleoside triphosphate hydrolases 50447 - Translation proteins | 0 | DIRECT |
52540,88697 52540 - P-loop containing nucleoside triphosphate hydrolases 88697 - PUA domain-like | 0 | DIRECT |
56219,56672 56219 - DNase I-like 56672 - DNA/RNA polymerases | 0 | DIRECT |
50249,56300 50249 - Nucleic acid-binding proteins 56300 - Metallo-dependent phosphatases | 0 | DIRECT |
55608,56672 55608 - Homing endonucleases 56672 - DNA/RNA polymerases | 0 | DIRECT |
50494,56672 50494 - Trypsin-like serine proteases 56672 - DNA/RNA polymerases | 0 | DIRECT |
53448,51182 53448 - Nucleotide-diphospho-sugar transferases 51182 - RmlC-like cupins | 0 | DIRECT |
88697,52374 88697 - PUA domain-like 52374 - Nucleotidylyl transferase | 0 | DIRECT |
88633,88633 88633 - Positive stranded ssRNA viruses 88633 - Positive stranded ssRNA viruses | 0 | DIRECT |
46915,54211 46915 - Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 54211 - Ribosomal protein S5 domain 2-like | 0 | DIRECT |
57667,54928 57667 - beta-beta-alpha zinc fingers 54928 - RNA-binding domain, RBD | 0 | DIRECT |
81301,81631 81301 - Nucleotidyltransferase 81631 - PAP/OAS1 substrate-binding domain | 0 | DIRECT |
47943,47353 47943 - Retrovirus capsid protein, N-terminal core domain 47353 - Retrovirus capsid dimerization domain-like | 0 | DIRECT |
50465,52540 50465 - EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
56672,88633 56672 - DNA/RNA polymerases 88633 - Positive stranded ssRNA viruses | 0 | DIRECT |
50249,89550 50249 - Nucleic acid-binding proteins 89550 - PHP domain-like | 0 | DIRECT |
52540,142877 52540 - P-loop containing nucleoside triphosphate hydrolases 142877 - EndoU-like | 0 | DIRECT |
55979,55979 55979 - DNA clamp 55979 - DNA clamp | 0 | DIRECT |
52540,89043 52540 - P-loop containing nucleoside triphosphate hydrolases 89043 - Soluble domain of poliovirus core protein 3a | 0 | DIRECT |
53448,52266 53448 - Nucleotide-diphospho-sugar transferases 52266 - SGNH hydrolase | 0 | DIRECT |
53448,51161 53448 - Nucleotide-diphospho-sugar transferases 51161 - Trimeric LpxA-like enzymes | 0 | DIRECT |
53098,51283 53098 - Ribonuclease H-like 51283 - dUTPase-like | 0 | DIRECT |
52540,48019 52540 - P-loop containing nucleoside triphosphate hydrolases 48019 - post-AAA+ oligomerization domain-like | 0 | DIRECT |
88723,47807 88723 - PIN domain-like 47807 - 5' to 3' exonuclease, C-terminal subdomain | 0 | DIRECT |
53448,69765 53448 - Nucleotide-diphospho-sugar transferases 69765 - IpsF-like | 0 | DIRECT |
46919,53098 46919 - N-terminal Zn binding domain of HIV integrase 53098 - Ribonuclease H-like | 0 | DIRECT |
53098,46919 53098 - Ribonuclease H-like 46919 - N-terminal Zn binding domain of HIV integrase | 0 | DIRECT |
54211,55666 54211 - Ribosomal protein S5 domain 2-like 55666 - Ribonuclease PH domain 2-like | 0 | DIRECT |
56672,55608 56672 - DNA/RNA polymerases 55608 - Homing endonucleases | 0 | DIRECT |
56672,100879 56672 - DNA/RNA polymerases 100879 - Lesion bypass DNA polymerase (Y-family), little finger domain | 0 | DIRECT |
52113,47802 52113 - BRCT domain 47802 - DNA polymerase beta, N-terminal domain-like | 0 | DIRECT |
53448,56784 53448 - Nucleotide-diphospho-sugar transferases 56784 - HAD-like | 0 | DIRECT |
81593,81891 81593 - Nucleotidyltransferase substrate binding subunit/domain 81891 - Poly A polymerase C-terminal region-like | 0 | DIRECT |
47807,56672 47807 - 5' to 3' exonuclease, C-terminal subdomain 56672 - DNA/RNA polymerases | 0 | DIRECT |
81631,55003 81631 - PAP/OAS1 substrate-binding domain 55003 - PAP/Archaeal CCA-adding enzyme, C-terminal domain | 0 | DIRECT |
52799,56091 52799 - (Phosphotyrosine protein) phosphatases II 56091 - DNA ligase/mRNA capping enzyme, catalytic domain | 0 | DIRECT |
53335,56672 53335 - S-adenosyl-L-methionine-dependent methyltransferases 56672 - DNA/RNA polymerases | 0 | DIRECT |
53098,56672 53098 - Ribonuclease H-like 56672 - DNA/RNA polymerases | 0 | DIRECT |
47802,81585 47802 - DNA polymerase beta, N-terminal domain-like 81585 - PsbU/PolX domain-like | 0 | DIRECT |
140367,143076 140367 - Coronavirus NSP7-like 143076 - Coronavirus NSP8-like | 0 | DIRECT |
52374,82114 52374 - Nucleotidylyl transferase 82114 - Riboflavin kinase-like | 0 | DIRECT |
89043,50494 89043 - Soluble domain of poliovirus core protein 3a 50494 - Trypsin-like serine proteases | 0 | DIRECT |
47807,53098 47807 - 5' to 3' exonuclease, C-terminal subdomain 53098 - Ribonuclease H-like | 0 | DIRECT |
81891,109604 81891 - Poly A polymerase C-terminal region-like 109604 - HD-domain/PDEase-like | 0 | DIRECT |
56672,53098 56672 - DNA/RNA polymerases 53098 - Ribonuclease H-like | 0 | DIRECT |
50630,56672 50630 - Acid proteases 56672 - DNA/RNA polymerases | 0 | DIRECT |
50494,52540 50494 - Trypsin-like serine proteases 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
88633,50494 88633 - Positive stranded ssRNA viruses 50494 - Trypsin-like serine proteases | 0 | DIRECT |
53335,142877 53335 - S-adenosyl-L-methionine-dependent methyltransferases 142877 - EndoU-like | 0 | DIRECT |
52540,56672 52540 - P-loop containing nucleoside triphosphate hydrolases 56672 - DNA/RNA polymerases | 0 | DIRECT |
53098,50122 53098 - Ribonuclease H-like 50122 - DNA-binding domain of retroviral integrase | 0 | DIRECT |
88798,50249 88798 - N-terminal, heterodimerisation domain of RBP7 (RpoE) 50249 - Nucleic acid-binding proteins | 0 | DIRECT |
54791,50249 54791 - Eukaryotic type KH-domain (KH-domain type I) 50249 - Nucleic acid-binding proteins | 0 | DIRECT |
55666,46915 55666 - Ribonuclease PH domain 2-like 46915 - Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 | 0 | DIRECT |
55021,55021 55021 - ACT-like 55021 - ACT-like | 0 | DIRECT |
51294,56672 51294 - Hedgehog/intein (Hint) domain 56672 - DNA/RNA polymerases | 0 | DIRECT |
81301,81593 81301 - Nucleotidyltransferase 81593 - Nucleotidyltransferase substrate binding subunit/domain | 0 | DIRECT |
89550,53098 89550 - PHP domain-like 53098 - Ribonuclease H-like | 0 | DIRECT |
47836,47943 47836 - Retroviral matrix proteins 47943 - Retrovirus capsid protein, N-terminal core domain | 0 | DIRECT |
55666,54791 55666 - Ribonuclease PH domain 2-like 54791 - Eukaryotic type KH-domain (KH-domain type I) | 0 | DIRECT |
101816,144246 101816 - Replicase NSP9 144246 - Coronavirus NSP10-like | 0 | DIRECT |
81631,57756 81631 - PAP/OAS1 substrate-binding domain 57756 - Retrovirus zinc finger-like domains | 0 | DIRECT |
50447,50465 50447 - Translation proteins 50465 - EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 0 | DIRECT |
143076,101816 143076 - Coronavirus NSP8-like 101816 - Replicase NSP9 | 0 | DIRECT |
55154,56091 55154 - CYTH-like phosphatases 56091 - DNA ligase/mRNA capping enzyme, catalytic domain | 0 | DIRECT |
81585,81301 81585 - PsbU/PolX domain-like 81301 - Nucleotidyltransferase | 0 | DIRECT |
109604,55021 109604 - HD-domain/PDEase-like 55021 - ACT-like | 0 | DIRECT |
52949,52540 52949 - Macro domain-like 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
52540,52540 52540 - P-loop containing nucleoside triphosphate hydrolases 52540 - P-loop containing nucleoside triphosphate hydrolases | 0.00000000007399 | DIRECT |
52374,52374 52374 - Nucleotidylyl transferase 52374 - Nucleotidylyl transferase | 0.0000000007216 | DIRECT |
51197,52540 51197 - Clavaminate synthase-like 52540 - P-loop containing nucleoside triphosphate hydrolases | 0.000000002056 | DIRECT |
54001,88633 54001 - Cysteine proteinases 88633 - Positive stranded ssRNA viruses | 0.000001048 | DIRECT |
57756,57756 57756 - Retrovirus zinc finger-like domains 57756 - Retrovirus zinc finger-like domains | 0.00001926 | DIRECT |
53218,63867 53218 - Molybdenum cofactor biosynthesis proteins 63867 - MoeA C-terminal domain-like | 0.00002197 | DIRECT |
63882,53218 63882 - MoeA N-terminal region -like 53218 - Molybdenum cofactor biosynthesis proteins | 0.00002197 | DIRECT |
159936,52949 159936 - NSP3A-like 52949 - Macro domain-like | 0.00004814 | DIRECT |
159936,53335 159936 - NSP3A-like 53335 - S-adenosyl-L-methionine-dependent methyltransferases | 0.0002226 | DIRECT |
52374,52540 52374 - Nucleotidylyl transferase 52540 - P-loop containing nucleoside triphosphate hydrolases | 0.003463 | INHERITED FROM: Nicotinamide-nucleotide adenylyltransferase || Sulfate adenylyltransferase |
57783,57783 57783 - Zinc beta-ribbon 57783 - Zinc beta-ribbon | 0.02392 | INHERITED FROM: DNA-directed RNA polymerase |
56091,50249 56091 - DNA ligase/mRNA capping enzyme, catalytic domain 50249 - Nucleic acid-binding proteins | 1 | INHERITED FROM: mRNA guanylyltransferase |
Supra-domain (Duplex) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
47353,57756 47353 - Retrovirus capsid dimerization domain-like 57756 - Retrovirus zinc finger-like domains | 0 | Direct |
53098,53098 53098 - Ribonuclease H-like 53098 - Ribonuclease H-like | 0 | Direct |
56672,90234 56672 - DNA/RNA polymerases 90234 - Zinc finger domain of DNA polymerase-alpha | 0 | Direct |
56672,52540 56672 - DNA/RNA polymerases 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
81301,81891 81301 - Nucleotidyltransferase 81891 - Poly A polymerase C-terminal region-like | 0 | Direct |
48452,140931 48452 - TPR-like 140931 - Fic-like | 0 | Direct |
64484,64484 64484 - beta and beta-prime subunits of DNA dependent RNA-polymerase 64484 - beta and beta-prime subunits of DNA dependent RNA-polymerase | 0 | Direct |
55681,82649 55681 - Class II aaRS and biotin synthetases 82649 - SufE/NifU | 0 | Direct |
56983,81296 56983 - Viral glycoprotein, central and dimerisation domains 81296 - E set domains | 0 | Direct |
57756,50630 57756 - Retrovirus zinc finger-like domains 50630 - Acid proteases | 0 | Direct |
56672,51294 56672 - DNA/RNA polymerases 51294 - Hedgehog/intein (Hint) domain | 0 | Direct |
53335,52949 53335 - S-adenosyl-L-methionine-dependent methyltransferases 52949 - Macro domain-like | 0 | Direct |
54197,54197 54197 - HIT-like 54197 - HIT-like | 0 | Direct |
51283,46919 51283 - dUTPase-like 46919 - N-terminal Zn binding domain of HIV integrase | 0 | Direct |
56553,55257 56553 - Insert subdomain of RNA polymerase alpha subunit 55257 - RBP11-like subunits of RNA polymerase | 0 | Direct |
55257,47789 55257 - RBP11-like subunits of RNA polymerase 47789 - C-terminal domain of RNA polymerase alpha subunit | 0 | Direct |
52540,50447 52540 - P-loop containing nucleoside triphosphate hydrolases 50447 - Translation proteins | 0 | Direct |
52540,88697 52540 - P-loop containing nucleoside triphosphate hydrolases 88697 - PUA domain-like | 0 | Direct |
56219,56672 56219 - DNase I-like 56672 - DNA/RNA polymerases | 0 | Direct |
50249,56300 50249 - Nucleic acid-binding proteins 56300 - Metallo-dependent phosphatases | 0 | Direct |
55608,56672 55608 - Homing endonucleases 56672 - DNA/RNA polymerases | 0 | Direct |
50494,56672 50494 - Trypsin-like serine proteases 56672 - DNA/RNA polymerases | 0 | Direct |
53448,51182 53448 - Nucleotide-diphospho-sugar transferases 51182 - RmlC-like cupins | 0 | Direct |
88697,52374 88697 - PUA domain-like 52374 - Nucleotidylyl transferase | 0 | Direct |
88633,88633 88633 - Positive stranded ssRNA viruses 88633 - Positive stranded ssRNA viruses | 0 | Direct |
46915,54211 46915 - Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 54211 - Ribosomal protein S5 domain 2-like | 0 | Direct |
57667,54928 57667 - beta-beta-alpha zinc fingers 54928 - RNA-binding domain, RBD | 0 | Direct |
81301,81631 81301 - Nucleotidyltransferase 81631 - PAP/OAS1 substrate-binding domain | 0 | Direct |
47943,47353 47943 - Retrovirus capsid protein, N-terminal core domain 47353 - Retrovirus capsid dimerization domain-like | 0 | Direct |
50465,52540 50465 - EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
56672,88633 56672 - DNA/RNA polymerases 88633 - Positive stranded ssRNA viruses | 0 | Direct |
50249,89550 50249 - Nucleic acid-binding proteins 89550 - PHP domain-like | 0 | Direct |
52540,142877 52540 - P-loop containing nucleoside triphosphate hydrolases 142877 - EndoU-like | 0 | Direct |
55979,55979 55979 - DNA clamp 55979 - DNA clamp | 0 | Direct |
52540,89043 52540 - P-loop containing nucleoside triphosphate hydrolases 89043 - Soluble domain of poliovirus core protein 3a | 0 | Direct |
53448,52266 53448 - Nucleotide-diphospho-sugar transferases 52266 - SGNH hydrolase | 0 | Direct |
53448,51161 53448 - Nucleotide-diphospho-sugar transferases 51161 - Trimeric LpxA-like enzymes | 0 | Direct |
53098,51283 53098 - Ribonuclease H-like 51283 - dUTPase-like | 0 | Direct |
52540,48019 52540 - P-loop containing nucleoside triphosphate hydrolases 48019 - post-AAA+ oligomerization domain-like | 0 | Direct |
88723,47807 88723 - PIN domain-like 47807 - 5' to 3' exonuclease, C-terminal subdomain | 0 | Direct |
53448,69765 53448 - Nucleotide-diphospho-sugar transferases 69765 - IpsF-like | 0 | Direct |
46919,53098 46919 - N-terminal Zn binding domain of HIV integrase 53098 - Ribonuclease H-like | 0 | Direct |
53098,46919 53098 - Ribonuclease H-like 46919 - N-terminal Zn binding domain of HIV integrase | 0 | Direct |
54211,55666 54211 - Ribosomal protein S5 domain 2-like 55666 - Ribonuclease PH domain 2-like | 0 | Direct |
56672,55608 56672 - DNA/RNA polymerases 55608 - Homing endonucleases | 0 | Direct |
56672,100879 56672 - DNA/RNA polymerases 100879 - Lesion bypass DNA polymerase (Y-family), little finger domain | 0 | Direct |
52113,47802 52113 - BRCT domain 47802 - DNA polymerase beta, N-terminal domain-like | 0 | Direct |
53448,56784 53448 - Nucleotide-diphospho-sugar transferases 56784 - HAD-like | 0 | Direct |
81593,81891 81593 - Nucleotidyltransferase substrate binding subunit/domain 81891 - Poly A polymerase C-terminal region-like | 0 | Direct |
47807,56672 47807 - 5' to 3' exonuclease, C-terminal subdomain 56672 - DNA/RNA polymerases | 0 | Direct |
81631,55003 81631 - PAP/OAS1 substrate-binding domain 55003 - PAP/Archaeal CCA-adding enzyme, C-terminal domain | 0 | Direct |
52799,56091 52799 - (Phosphotyrosine protein) phosphatases II 56091 - DNA ligase/mRNA capping enzyme, catalytic domain | 0 | Direct |
53335,56672 53335 - S-adenosyl-L-methionine-dependent methyltransferases 56672 - DNA/RNA polymerases | 0 | Direct |
53098,56672 53098 - Ribonuclease H-like 56672 - DNA/RNA polymerases | 0 | Direct |
47802,81585 47802 - DNA polymerase beta, N-terminal domain-like 81585 - PsbU/PolX domain-like | 0 | Direct |
140367,143076 140367 - Coronavirus NSP7-like 143076 - Coronavirus NSP8-like | 0 | Direct |
52374,82114 52374 - Nucleotidylyl transferase 82114 - Riboflavin kinase-like | 0 | Direct |
89043,50494 89043 - Soluble domain of poliovirus core protein 3a 50494 - Trypsin-like serine proteases | 0 | Direct |
47807,53098 47807 - 5' to 3' exonuclease, C-terminal subdomain 53098 - Ribonuclease H-like | 0 | Direct |
81891,109604 81891 - Poly A polymerase C-terminal region-like 109604 - HD-domain/PDEase-like | 0 | Direct |
56672,53098 56672 - DNA/RNA polymerases 53098 - Ribonuclease H-like | 0 | Direct |
50630,56672 50630 - Acid proteases 56672 - DNA/RNA polymerases | 0 | Direct |
50494,52540 50494 - Trypsin-like serine proteases 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
88633,50494 88633 - Positive stranded ssRNA viruses 50494 - Trypsin-like serine proteases | 0 | Direct |
53335,142877 53335 - S-adenosyl-L-methionine-dependent methyltransferases 142877 - EndoU-like | 0 | Direct |
52540,56672 52540 - P-loop containing nucleoside triphosphate hydrolases 56672 - DNA/RNA polymerases | 0 | Direct |
53098,50122 53098 - Ribonuclease H-like 50122 - DNA-binding domain of retroviral integrase | 0 | Direct |
88798,50249 88798 - N-terminal, heterodimerisation domain of RBP7 (RpoE) 50249 - Nucleic acid-binding proteins | 0 | Direct |
54791,50249 54791 - Eukaryotic type KH-domain (KH-domain type I) 50249 - Nucleic acid-binding proteins | 0 | Direct |
55666,46915 55666 - Ribonuclease PH domain 2-like 46915 - Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 | 0 | Direct |
55021,55021 55021 - ACT-like 55021 - ACT-like | 0 | Direct |
51294,56672 51294 - Hedgehog/intein (Hint) domain 56672 - DNA/RNA polymerases | 0 | Direct |
81301,81593 81301 - Nucleotidyltransferase 81593 - Nucleotidyltransferase substrate binding subunit/domain | 0 | Direct |
89550,53098 89550 - PHP domain-like 53098 - Ribonuclease H-like | 0 | Direct |
47836,47943 47836 - Retroviral matrix proteins 47943 - Retrovirus capsid protein, N-terminal core domain | 0 | Direct |
55666,54791 55666 - Ribonuclease PH domain 2-like 54791 - Eukaryotic type KH-domain (KH-domain type I) | 0 | Direct |
101816,144246 101816 - Replicase NSP9 144246 - Coronavirus NSP10-like | 0 | Direct |
81631,57756 81631 - PAP/OAS1 substrate-binding domain 57756 - Retrovirus zinc finger-like domains | 0 | Direct |
50447,50465 50447 - Translation proteins 50465 - EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 0 | Direct |
143076,101816 143076 - Coronavirus NSP8-like 101816 - Replicase NSP9 | 0 | Direct |
55154,56091 55154 - CYTH-like phosphatases 56091 - DNA ligase/mRNA capping enzyme, catalytic domain | 0 | Direct |
81585,81301 81585 - PsbU/PolX domain-like 81301 - Nucleotidyltransferase | 0 | Direct |
109604,55021 109604 - HD-domain/PDEase-like 55021 - ACT-like | 0 | Direct |
52949,52540 52949 - Macro domain-like 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
52540,52540 52540 - P-loop containing nucleoside triphosphate hydrolases 52540 - P-loop containing nucleoside triphosphate hydrolases | 0.00000000007399 | Direct |
52374,52374 52374 - Nucleotidylyl transferase 52374 - Nucleotidylyl transferase | 0.0000000007216 | Direct |
51197,52540 51197 - Clavaminate synthase-like 52540 - P-loop containing nucleoside triphosphate hydrolases | 0.000000002056 | Direct |
54001,88633 54001 - Cysteine proteinases 88633 - Positive stranded ssRNA viruses | 0.000001048 | Direct |
57756,57756 57756 - Retrovirus zinc finger-like domains 57756 - Retrovirus zinc finger-like domains | 0.00001926 | Direct |
53218,63867 53218 - Molybdenum cofactor biosynthesis proteins 63867 - MoeA C-terminal domain-like | 0.00002197 | Direct |
63882,53218 63882 - MoeA N-terminal region -like 53218 - Molybdenum cofactor biosynthesis proteins | 0.00002197 | Direct |
159936,52949 159936 - NSP3A-like 52949 - Macro domain-like | 0.00004814 | Direct |
159936,53335 159936 - NSP3A-like 53335 - S-adenosyl-L-methionine-dependent methyltransferases | 0.0002226 | Direct |
52374,52540 52374 - Nucleotidylyl transferase 52540 - P-loop containing nucleoside triphosphate hydrolases | 0.003463 | Inherited |
57783,57783 57783 - Zinc beta-ribbon 57783 - Zinc beta-ribbon | 0.02392 | Inherited |
56091,50249 56091 - DNA ligase/mRNA capping enzyme, catalytic domain 50249 - Nucleic acid-binding proteins | 1 | Inherited |
(show details)
Supra-domains annotated to this EC term (SPEO level: Least Informative)
Highlighted in gray are those with FDR>0.001
Supra-domain (Triple) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
89043,50494,56672 89043 - Soluble domain of poliovirus core protein 3a 50494 - Trypsin-like serine proteases 56672 - DNA/RNA polymerases | 0 | DIRECT |
53098,51283,46919 53098 - Ribonuclease H-like 51283 - dUTPase-like 46919 - N-terminal Zn binding domain of HIV integrase | 0 | DIRECT |
50494,52540,52540 50494 - Trypsin-like serine proteases 52540 - P-loop containing nucleoside triphosphate hydrolases 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
52949,52540,52540 52949 - Macro domain-like 52540 - P-loop containing nucleoside triphosphate hydrolases 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
56672,53098,51283 56672 - DNA/RNA polymerases 53098 - Ribonuclease H-like 51283 - dUTPase-like | 0 | DIRECT |
88723,47807,56672 88723 - PIN domain-like 47807 - 5' to 3' exonuclease, C-terminal subdomain 56672 - DNA/RNA polymerases | 0 | DIRECT |
53098,56672,51294 53098 - Ribonuclease H-like 56672 - DNA/RNA polymerases 51294 - Hedgehog/intein (Hint) domain | 0 | DIRECT |
53098,46919,53098 53098 - Ribonuclease H-like 46919 - N-terminal Zn binding domain of HIV integrase 53098 - Ribonuclease H-like | 0 | DIRECT |
50494,52540,89043 50494 - Trypsin-like serine proteases 52540 - P-loop containing nucleoside triphosphate hydrolases 89043 - Soluble domain of poliovirus core protein 3a | 0 | DIRECT |
57756,50630,56672 57756 - Retrovirus zinc finger-like domains 50630 - Acid proteases 56672 - DNA/RNA polymerases | 0 | DIRECT |
55979,55979,55979 55979 - DNA clamp 55979 - DNA clamp 55979 - DNA clamp | 0 | DIRECT |
54211,55666,54791 54211 - Ribosomal protein S5 domain 2-like 55666 - Ribonuclease PH domain 2-like 54791 - Eukaryotic type KH-domain (KH-domain type I) | 0 | DIRECT |
51294,56672,55608 51294 - Hedgehog/intein (Hint) domain 56672 - DNA/RNA polymerases 55608 - Homing endonucleases | 0 | DIRECT |
55608,56672,51294 55608 - Homing endonucleases 56672 - DNA/RNA polymerases 51294 - Hedgehog/intein (Hint) domain | 0 | DIRECT |
51197,52540,56672 51197 - Clavaminate synthase-like 52540 - P-loop containing nucleoside triphosphate hydrolases 56672 - DNA/RNA polymerases | 0 | DIRECT |
140367,143076,101816 140367 - Coronavirus NSP7-like 143076 - Coronavirus NSP8-like 101816 - Replicase NSP9 | 0 | DIRECT |
53098,56672,90234 53098 - Ribonuclease H-like 56672 - DNA/RNA polymerases 90234 - Zinc finger domain of DNA polymerase-alpha | 0 | DIRECT |
47802,81585,81301 47802 - DNA polymerase beta, N-terminal domain-like 81585 - PsbU/PolX domain-like 81301 - Nucleotidyltransferase | 0 | DIRECT |
47836,47943,47353 47836 - Retroviral matrix proteins 47943 - Retrovirus capsid protein, N-terminal core domain 47353 - Retrovirus capsid dimerization domain-like | 0 | DIRECT |
50447,50465,52540 50447 - Translation proteins 50465 - EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
52113,47802,81585 52113 - BRCT domain 47802 - DNA polymerase beta, N-terminal domain-like 81585 - PsbU/PolX domain-like | 0 | DIRECT |
52540,52540,56672 52540 - P-loop containing nucleoside triphosphate hydrolases 52540 - P-loop containing nucleoside triphosphate hydrolases 56672 - DNA/RNA polymerases | 0 | DIRECT |
56553,55257,47789 56553 - Insert subdomain of RNA polymerase alpha subunit 55257 - RBP11-like subunits of RNA polymerase 47789 - C-terminal domain of RNA polymerase alpha subunit | 0 | DIRECT |
56672,52540,52540 56672 - DNA/RNA polymerases 52540 - P-loop containing nucleoside triphosphate hydrolases 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
47943,47353,57756 47943 - Retrovirus capsid protein, N-terminal core domain 47353 - Retrovirus capsid dimerization domain-like 57756 - Retrovirus zinc finger-like domains | 0 | DIRECT |
55666,54791,50249 55666 - Ribonuclease PH domain 2-like 54791 - Eukaryotic type KH-domain (KH-domain type I) 50249 - Nucleic acid-binding proteins | 0 | DIRECT |
55666,46915,54211 55666 - Ribonuclease PH domain 2-like 46915 - Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 54211 - Ribosomal protein S5 domain 2-like | 0 | DIRECT |
56672,53098,46919 56672 - DNA/RNA polymerases 53098 - Ribonuclease H-like 46919 - N-terminal Zn binding domain of HIV integrase | 0 | DIRECT |
88697,52374,52540 88697 - PUA domain-like 52374 - Nucleotidylyl transferase 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
46919,53098,50122 46919 - N-terminal Zn binding domain of HIV integrase 53098 - Ribonuclease H-like 50122 - DNA-binding domain of retroviral integrase | 0 | DIRECT |
56672,53098,50122 56672 - DNA/RNA polymerases 53098 - Ribonuclease H-like 50122 - DNA-binding domain of retroviral integrase | 0 | DIRECT |
50494,56672,88633 50494 - Trypsin-like serine proteases 56672 - DNA/RNA polymerases 88633 - Positive stranded ssRNA viruses | 0 | DIRECT |
88633,88633,88633 88633 - Positive stranded ssRNA viruses 88633 - Positive stranded ssRNA viruses 88633 - Positive stranded ssRNA viruses | 0 | DIRECT |
52540,52540,142877 52540 - P-loop containing nucleoside triphosphate hydrolases 52540 - P-loop containing nucleoside triphosphate hydrolases 142877 - EndoU-like | 0 | DIRECT |
52540,89043,50494 52540 - P-loop containing nucleoside triphosphate hydrolases 89043 - Soluble domain of poliovirus core protein 3a 50494 - Trypsin-like serine proteases | 0 | DIRECT |
50494,52540,56672 50494 - Trypsin-like serine proteases 52540 - P-loop containing nucleoside triphosphate hydrolases 56672 - DNA/RNA polymerases | 0 | DIRECT |
81301,81593,81891 81301 - Nucleotidyltransferase 81593 - Nucleotidyltransferase substrate binding subunit/domain 81891 - Poly A polymerase C-terminal region-like | 0 | DIRECT |
52949,52540,56672 52949 - Macro domain-like 52540 - P-loop containing nucleoside triphosphate hydrolases 56672 - DNA/RNA polymerases | 0 | DIRECT |
143076,101816,144246 143076 - Coronavirus NSP8-like 101816 - Replicase NSP9 144246 - Coronavirus NSP10-like | 0 | DIRECT |
47353,57756,50630 47353 - Retrovirus capsid dimerization domain-like 57756 - Retrovirus zinc finger-like domains 50630 - Acid proteases | 0 | DIRECT |
47807,53098,56672 47807 - 5' to 3' exonuclease, C-terminal subdomain 53098 - Ribonuclease H-like 56672 - DNA/RNA polymerases | 0 | DIRECT |
54211,55666,46915 54211 - Ribosomal protein S5 domain 2-like 55666 - Ribonuclease PH domain 2-like 46915 - Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 | 0 | DIRECT |
81301,81631,57756 81301 - Nucleotidyltransferase 81631 - PAP/OAS1 substrate-binding domain 57756 - Retrovirus zinc finger-like domains | 0 | DIRECT |
81891,109604,55021 81891 - Poly A polymerase C-terminal region-like 109604 - HD-domain/PDEase-like 55021 - ACT-like | 0 | DIRECT |
52540,88697,52374 52540 - P-loop containing nucleoside triphosphate hydrolases 88697 - PUA domain-like 52374 - Nucleotidylyl transferase | 0 | DIRECT |
51283,46919,53098 51283 - dUTPase-like 46919 - N-terminal Zn binding domain of HIV integrase 53098 - Ribonuclease H-like | 0 | DIRECT |
52799,56091,50249 52799 - (Phosphotyrosine protein) phosphatases II 56091 - DNA ligase/mRNA capping enzyme, catalytic domain 50249 - Nucleic acid-binding proteins | 0 | DIRECT |
50249,89550,53098 50249 - Nucleic acid-binding proteins 89550 - PHP domain-like 53098 - Ribonuclease H-like | 0 | DIRECT |
50630,56672,53098 50630 - Acid proteases 56672 - DNA/RNA polymerases 53098 - Ribonuclease H-like | 0 | DIRECT |
88633,50494,52540 88633 - Positive stranded ssRNA viruses 50494 - Trypsin-like serine proteases 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
109604,55021,55021 109604 - HD-domain/PDEase-like 55021 - ACT-like 55021 - ACT-like | 0 | DIRECT |
81301,81631,55003 81301 - Nucleotidyltransferase 81631 - PAP/OAS1 substrate-binding domain 55003 - PAP/Archaeal CCA-adding enzyme, C-terminal domain | 0 | DIRECT |
88723,47807,53098 88723 - PIN domain-like 47807 - 5' to 3' exonuclease, C-terminal subdomain 53098 - Ribonuclease H-like | 0 | DIRECT |
56672,53098,53098 56672 - DNA/RNA polymerases 53098 - Ribonuclease H-like 53098 - Ribonuclease H-like | 0 | DIRECT |
52540,50447,50465 52540 - P-loop containing nucleoside triphosphate hydrolases 50447 - Translation proteins 50465 - EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 0 | DIRECT |
56672,55608,56672 56672 - DNA/RNA polymerases 55608 - Homing endonucleases 56672 - DNA/RNA polymerases | 0 | DIRECT |
46915,54211,55666 46915 - Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 54211 - Ribosomal protein S5 domain 2-like 55666 - Ribonuclease PH domain 2-like | 0 | DIRECT |
54001,88633,88633 54001 - Cysteine proteinases 88633 - Positive stranded ssRNA viruses 88633 - Positive stranded ssRNA viruses | 0.000001048 | DIRECT |
63882,53218,63867 63882 - MoeA N-terminal region -like 53218 - Molybdenum cofactor biosynthesis proteins 63867 - MoeA C-terminal domain-like | 0.00002197 | DIRECT |
Supra-domain (Triple) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
89043,50494,56672 89043 - Soluble domain of poliovirus core protein 3a 50494 - Trypsin-like serine proteases 56672 - DNA/RNA polymerases | 0 | Direct |
53098,51283,46919 53098 - Ribonuclease H-like 51283 - dUTPase-like 46919 - N-terminal Zn binding domain of HIV integrase | 0 | Direct |
50494,52540,52540 50494 - Trypsin-like serine proteases 52540 - P-loop containing nucleoside triphosphate hydrolases 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
52949,52540,52540 52949 - Macro domain-like 52540 - P-loop containing nucleoside triphosphate hydrolases 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
56672,53098,51283 56672 - DNA/RNA polymerases 53098 - Ribonuclease H-like 51283 - dUTPase-like | 0 | Direct |
88723,47807,56672 88723 - PIN domain-like 47807 - 5' to 3' exonuclease, C-terminal subdomain 56672 - DNA/RNA polymerases | 0 | Direct |
53098,56672,51294 53098 - Ribonuclease H-like 56672 - DNA/RNA polymerases 51294 - Hedgehog/intein (Hint) domain | 0 | Direct |
53098,46919,53098 53098 - Ribonuclease H-like 46919 - N-terminal Zn binding domain of HIV integrase 53098 - Ribonuclease H-like | 0 | Direct |
50494,52540,89043 50494 - Trypsin-like serine proteases 52540 - P-loop containing nucleoside triphosphate hydrolases 89043 - Soluble domain of poliovirus core protein 3a | 0 | Direct |
57756,50630,56672 57756 - Retrovirus zinc finger-like domains 50630 - Acid proteases 56672 - DNA/RNA polymerases | 0 | Direct |
55979,55979,55979 55979 - DNA clamp 55979 - DNA clamp 55979 - DNA clamp | 0 | Direct |
54211,55666,54791 54211 - Ribosomal protein S5 domain 2-like 55666 - Ribonuclease PH domain 2-like 54791 - Eukaryotic type KH-domain (KH-domain type I) | 0 | Direct |
51294,56672,55608 51294 - Hedgehog/intein (Hint) domain 56672 - DNA/RNA polymerases 55608 - Homing endonucleases | 0 | Direct |
55608,56672,51294 55608 - Homing endonucleases 56672 - DNA/RNA polymerases 51294 - Hedgehog/intein (Hint) domain | 0 | Direct |
51197,52540,56672 51197 - Clavaminate synthase-like 52540 - P-loop containing nucleoside triphosphate hydrolases 56672 - DNA/RNA polymerases | 0 | Direct |
140367,143076,101816 140367 - Coronavirus NSP7-like 143076 - Coronavirus NSP8-like 101816 - Replicase NSP9 | 0 | Direct |
53098,56672,90234 53098 - Ribonuclease H-like 56672 - DNA/RNA polymerases 90234 - Zinc finger domain of DNA polymerase-alpha | 0 | Direct |
47802,81585,81301 47802 - DNA polymerase beta, N-terminal domain-like 81585 - PsbU/PolX domain-like 81301 - Nucleotidyltransferase | 0 | Direct |
47836,47943,47353 47836 - Retroviral matrix proteins 47943 - Retrovirus capsid protein, N-terminal core domain 47353 - Retrovirus capsid dimerization domain-like | 0 | Direct |
50447,50465,52540 50447 - Translation proteins 50465 - EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
52113,47802,81585 52113 - BRCT domain 47802 - DNA polymerase beta, N-terminal domain-like 81585 - PsbU/PolX domain-like | 0 | Direct |
52540,52540,56672 52540 - P-loop containing nucleoside triphosphate hydrolases 52540 - P-loop containing nucleoside triphosphate hydrolases 56672 - DNA/RNA polymerases | 0 | Direct |
56553,55257,47789 56553 - Insert subdomain of RNA polymerase alpha subunit 55257 - RBP11-like subunits of RNA polymerase 47789 - C-terminal domain of RNA polymerase alpha subunit | 0 | Direct |
56672,52540,52540 56672 - DNA/RNA polymerases 52540 - P-loop containing nucleoside triphosphate hydrolases 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
47943,47353,57756 47943 - Retrovirus capsid protein, N-terminal core domain 47353 - Retrovirus capsid dimerization domain-like 57756 - Retrovirus zinc finger-like domains | 0 | Direct |
55666,54791,50249 55666 - Ribonuclease PH domain 2-like 54791 - Eukaryotic type KH-domain (KH-domain type I) 50249 - Nucleic acid-binding proteins | 0 | Direct |
55666,46915,54211 55666 - Ribonuclease PH domain 2-like 46915 - Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 54211 - Ribosomal protein S5 domain 2-like | 0 | Direct |
56672,53098,46919 56672 - DNA/RNA polymerases 53098 - Ribonuclease H-like 46919 - N-terminal Zn binding domain of HIV integrase | 0 | Direct |
88697,52374,52540 88697 - PUA domain-like 52374 - Nucleotidylyl transferase 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
46919,53098,50122 46919 - N-terminal Zn binding domain of HIV integrase 53098 - Ribonuclease H-like 50122 - DNA-binding domain of retroviral integrase | 0 | Direct |
56672,53098,50122 56672 - DNA/RNA polymerases 53098 - Ribonuclease H-like 50122 - DNA-binding domain of retroviral integrase | 0 | Direct |
50494,56672,88633 50494 - Trypsin-like serine proteases 56672 - DNA/RNA polymerases 88633 - Positive stranded ssRNA viruses | 0 | Direct |
88633,88633,88633 88633 - Positive stranded ssRNA viruses 88633 - Positive stranded ssRNA viruses 88633 - Positive stranded ssRNA viruses | 0 | Direct |
52540,52540,142877 52540 - P-loop containing nucleoside triphosphate hydrolases 52540 - P-loop containing nucleoside triphosphate hydrolases 142877 - EndoU-like | 0 | Direct |
52540,89043,50494 52540 - P-loop containing nucleoside triphosphate hydrolases 89043 - Soluble domain of poliovirus core protein 3a 50494 - Trypsin-like serine proteases | 0 | Direct |
50494,52540,56672 50494 - Trypsin-like serine proteases 52540 - P-loop containing nucleoside triphosphate hydrolases 56672 - DNA/RNA polymerases | 0 | Direct |
81301,81593,81891 81301 - Nucleotidyltransferase 81593 - Nucleotidyltransferase substrate binding subunit/domain 81891 - Poly A polymerase C-terminal region-like | 0 | Direct |
52949,52540,56672 52949 - Macro domain-like 52540 - P-loop containing nucleoside triphosphate hydrolases 56672 - DNA/RNA polymerases | 0 | Direct |
143076,101816,144246 143076 - Coronavirus NSP8-like 101816 - Replicase NSP9 144246 - Coronavirus NSP10-like | 0 | Direct |
47353,57756,50630 47353 - Retrovirus capsid dimerization domain-like 57756 - Retrovirus zinc finger-like domains 50630 - Acid proteases | 0 | Direct |
47807,53098,56672 47807 - 5' to 3' exonuclease, C-terminal subdomain 53098 - Ribonuclease H-like 56672 - DNA/RNA polymerases | 0 | Direct |
54211,55666,46915 54211 - Ribosomal protein S5 domain 2-like 55666 - Ribonuclease PH domain 2-like 46915 - Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 | 0 | Direct |
81301,81631,57756 81301 - Nucleotidyltransferase 81631 - PAP/OAS1 substrate-binding domain 57756 - Retrovirus zinc finger-like domains | 0 | Direct |
81891,109604,55021 81891 - Poly A polymerase C-terminal region-like 109604 - HD-domain/PDEase-like 55021 - ACT-like | 0 | Direct |
52540,88697,52374 52540 - P-loop containing nucleoside triphosphate hydrolases 88697 - PUA domain-like 52374 - Nucleotidylyl transferase | 0 | Direct |
51283,46919,53098 51283 - dUTPase-like 46919 - N-terminal Zn binding domain of HIV integrase 53098 - Ribonuclease H-like | 0 | Direct |
52799,56091,50249 52799 - (Phosphotyrosine protein) phosphatases II 56091 - DNA ligase/mRNA capping enzyme, catalytic domain 50249 - Nucleic acid-binding proteins | 0 | Direct |
50249,89550,53098 50249 - Nucleic acid-binding proteins 89550 - PHP domain-like 53098 - Ribonuclease H-like | 0 | Direct |
50630,56672,53098 50630 - Acid proteases 56672 - DNA/RNA polymerases 53098 - Ribonuclease H-like | 0 | Direct |
88633,50494,52540 88633 - Positive stranded ssRNA viruses 50494 - Trypsin-like serine proteases 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
109604,55021,55021 109604 - HD-domain/PDEase-like 55021 - ACT-like 55021 - ACT-like | 0 | Direct |
81301,81631,55003 81301 - Nucleotidyltransferase 81631 - PAP/OAS1 substrate-binding domain 55003 - PAP/Archaeal CCA-adding enzyme, C-terminal domain | 0 | Direct |
88723,47807,53098 88723 - PIN domain-like 47807 - 5' to 3' exonuclease, C-terminal subdomain 53098 - Ribonuclease H-like | 0 | Direct |
56672,53098,53098 56672 - DNA/RNA polymerases 53098 - Ribonuclease H-like 53098 - Ribonuclease H-like | 0 | Direct |
52540,50447,50465 52540 - P-loop containing nucleoside triphosphate hydrolases 50447 - Translation proteins 50465 - EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 0 | Direct |
56672,55608,56672 56672 - DNA/RNA polymerases 55608 - Homing endonucleases 56672 - DNA/RNA polymerases | 0 | Direct |
46915,54211,55666 46915 - Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 54211 - Ribosomal protein S5 domain 2-like 55666 - Ribonuclease PH domain 2-like | 0 | Direct |
54001,88633,88633 54001 - Cysteine proteinases 88633 - Positive stranded ssRNA viruses 88633 - Positive stranded ssRNA viruses | 0.000001048 | Direct |
63882,53218,63867 63882 - MoeA N-terminal region -like 53218 - Molybdenum cofactor biosynthesis proteins 63867 - MoeA C-terminal domain-like | 0.00002197 | Direct |
Plot distribution on phylogenetic tree for Individual Supra-domains annotated by this EC term
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A presence/absence matrix is generated using protein domains and supradomains
for all genomes in SUPERFAMILY. The RAxML
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heuristic parsimony methods. Genome combinations, or specific clades, can be displayed as
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