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Kosmotoga olearia TBF 19.5.1 superfamily assignments

Taxonomy
Taxonomy browser entry

Bacteria; Thermotogae; Thermotogae; Kosmotogales; Kosmotogaceae; Kosmotoga; Kosmotoga olearia; Kosmotoga olearia TBF 19.5.1

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Fasta format sequences
Domain assignments


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Assignment statistics

Sequences: 2118 total
1547 (73 %) with assignment
318 average length
67 % amino acid coverage
Domains: 2198 total
568 unique superfamilies
383 unique families
291 average length
3.9 average superfamily size
74 % formed by duplication
Domain combinations: 345 domain pairs
765 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies

201 179 57 9 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
64 58 6 1 SCOP 161098 MetI-like
43 42 17 1 SCOP 46785 "Winged helix" DNA-binding domain
40 39 14 5 SCOP 51735 NAD(P)-binding Rossmann-fold domains
37 23 8 5 SCOP 53067 Actin-like ATPase domain
37 36 6 1 SCOP 53850 Periplasmic binding protein-like II
36 27 18 4 SCOP 50249 Nucleic acid-binding proteins
33 33 5 1 SCOP 102114 Radical SAM enzymes
31 31 8 4 SCOP 53098 Ribonuclease H-like
29 28 17 1 SCOP 109604 HD-domain/PDEase-like
26 26 8 6 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
22 22 13 6 SCOP 51445 (Trans)glycosidases
21 21 7 0 SCOP 46689 Homeodomain-like
19 19 2 0 SCOP 103473 MFS general substrate transporter
19 19 6 0 SCOP 47413 lambda repressor-like DNA-binding domains
19 19 11 1 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
18 18 10 0 SCOP 54862 4Fe-4S ferredoxins
18 18 5 0 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
18 13 12 0 SCOP 55785 PYP-like sensor domain (PAS domain)
17 16 2 4 SCOP 53383 PLP-dependent transferases
17 17 3 2 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
17 17 10 1 SCOP 52172 CheY-like
16 13 5 1 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
15 14 6 1 SCOP 52833 Thioredoxin-like
15 15 11 3 SCOP 52374 Nucleotidylyl transferase
15 14 11 6 SCOP 54211 Ribosomal protein S5 domain 2-like
14 14 5 3 SCOP 53448 Nucleotide-diphospho-sugar transferases
14 14 9 2 SCOP 55681 Class II aaRS and biotin synthetases
14 12 9 0 SCOP 48452 TPR-like
14 14 3 1 SCOP 53822 Periplasmic binding protein-like I
12 12 5 0 SCOP 53474 alpha/beta-Hydrolases
12 11 3 3 SCOP 56784 HAD-like
12 12 6 0 SCOP 47384 Homodimeric domain of signal transducing histidine kinase
11 11 5 6 SCOP 51556 Metallo-dependent hydrolases
11 11 4 5 SCOP 51569 Aldolase
11 11 5 0 SCOP 51905 FAD/NAD(P)-binding domain
11 11 5 1 SCOP 56300 Metallo-dependent phosphatases
11 11 7 3 SCOP 52402 Adenine nucleotide alpha hydrolases-like
11 11 2 2 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
10 10 3 3 SCOP 53697 SIS domain
10 9 4 3 SCOP 52096 ClpP/crotonase
10 10 3 1 SCOP 53187 Zn-dependent exopeptidases
10 10 4 0 SCOP 51338 Composite domain of metallo-dependent hydrolases
10 3 3 0 SCOP 49265 Fibronectin type III
9 9 2 2 SCOP 53613 Ribokinase-like
9 9 3 3 SCOP 100950 NagB/RpiA/CoA transferase-like
9 9 9 1 SCOP 55073 Nucleotide cyclase
9 9 3 0 SCOP 54523 Pili subunits
9 6 6 1 SCOP 47781 RuvA domain 2-like
8 8 4 2 SCOP 52317 Class I glutamine amidotransferase-like
8 7 7 1 SCOP 55781 GAF domain-like
8 7 6 2 SCOP 50447 Translation proteins
8 8 4 2 SCOP 81301 Nucleotidyltransferase
8 7 4 0 SCOP 53300 vWA-like
8 4 2 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
8 8 3 1 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
8 8 3 2 SCOP 53623 MurD-like peptide ligases, catalytic domain
8 3 3 0 SCOP 53738 Phosphoglucomutase, first 3 domains
7 7 4 1 SCOP 55174 Alpha-L RNA-binding motif
7 7 4 1 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
7 7 3 2 SCOP 51161 Trimeric LpxA-like enzymes
7 7 2 0 SCOP 55811 Nudix
7 7 3 5 SCOP 56281 Metallo-hydrolase/oxidoreductase
7 7 3 2 SCOP 56672 DNA/RNA polymerases
7 7 3 1 SCOP 88723 PIN domain-like
7 7 3 0 SCOP 56317 Carbon-nitrogen hydrolase
7 7 6 0 SCOP 88697 PUA domain-like
7 7 3 0 SCOP 48295 TrpR-like
7 6 5 0 SCOP 49344 CBD9-like
7 7 3 0 SCOP 52922 TK C-terminal domain-like
6 4 2 1 SCOP 54197 HIT-like
6 6 3 3 SCOP 55120 Pseudouridine synthase
6 6 1 1 SCOP 82549 DAK1/DegV-like
6 6 4 0 SCOP 52980 Restriction endonuclease-like
6 6 5 1 SCOP 54631 CBS-domain pair
6 4 3 1 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
6 6 6 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
6 3 2 1 SCOP 54980 EF-G C-terminal domain-like
6 6 4 0 SCOP 51011 Glycosyl hydrolase domain
6 6 1 0 SCOP 160964 MalF N-terminal region-like
5 5 2 2 SCOP 53271 PRTase-like
5 5 2 1 SCOP 53167 Purine and uridine phosphorylases
5 5 4 2 SCOP 50104 Translation proteins SH3-like domain
5 5 2 1 SCOP 47240 Ferritin-like
5 5 1 2 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
5 5 3 2 SCOP 75217 alpha/beta knot
5 5 2 0 SCOP 50129 GroES-like
5 5 3 3 SCOP 53633 Carbamate kinase-like
5 5 2 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
5 5 3 1 SCOP 51419 PLP-binding barrel
5 5 4 2 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
5 5 5 1 SCOP 54534 FKBP-like
5 5 3 0 SCOP 54001 Cysteine proteinases
5 5 2 0 SCOP 51182 RmlC-like cupins
5 4 2 0 SCOP 55008 HMA, heavy metal-associated domain
5 5 2 1 SCOP 52151 FabD/lysophospholipase-like
5 4 4 1 SCOP 88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors
5 4 4 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
5 4 3 0 SCOP 55021 ACT-like
5 5 5 1 SCOP 52242 Cobalamin (vitamin B12)-binding domain
5 5 3 2 SCOP 51703 Cobalamin (vitamin B12)-dependent enzymes
5 3 2 2 SCOP 53901 Thiolase-like
5 5 2 2 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
5 5 2 1 SCOP 90123 ABC transporter transmembrane region
5 5 4 0 SCOP 56176 FAD-binding/transporter-associated domain-like
5 5 1 1 SCOP 101821 Aminopeptidase/glucanase lid domain
4 4 4 1 SCOP 56059 Glutathione synthetase ATP-binding domain-like
4 4 1 3 SCOP 51366 Ribulose-phoshate binding barrel
4 4 3 1 SCOP 55920 Creatinase/aminopeptidase
4 4 1 1 SCOP 51658 Xylose isomerase-like
4 4 4 0 SCOP 109998 Triger factor/SurA peptide-binding domain-like
4 4 2 1 SCOP 111283 Putative modulator of DNA gyrase, PmbA/TldD
4 4 4 3 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
4 4 1 0 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
4 4 1 2 SCOP 56655 Carbohydrate phosphatase
4 4 1 1 SCOP 56796 Dehydroquinate synthase-like
4 3 3 0 SCOP 81296 E set domains
4 4 2 2 SCOP 53649 Alkaline phosphatase-like
4 4 3 0 SCOP 74650 Galactose mutarotase-like
4 4 2 0 SCOP 51126 Pectin lyase-like
4 4 2 0 SCOP 48208 Six-hairpin glycosidases
4 4 3 0 SCOP 56601 beta-lactamase/transpeptidase-like
4 4 3 0 SCOP 89550 PHP domain-like
4 3 2 0 SCOP 51206 cAMP-binding domain-like
4 4 3 1 SCOP 52467 DHS-like NAD/FAD-binding domain
4 4 3 1 SCOP 53218 Molybdenum cofactor biosynthesis proteins
4 4 1 0 SCOP 46894 C-terminal effector domain of the bipartite response regulators
4 4 2 0 SCOP 53323 Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
4 4 3 0 SCOP 57802 Rubredoxin-like
4 3 3 0 SCOP 50037 C-terminal domain of transcriptional repressors
4 4 1 0 SCOP 50331 MOP-like
4 2 2 1 SCOP 49452 Starch-binding domain-like
4 4 4 1 SCOP 55186 ThrRS/AlaRS common domain
4 4 4 0 SCOP 46548 alpha-helical ferredoxin
4 3 3 0 SCOP 50156 PDZ domain-like
4 4 1 2 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
4 2 2 0 SCOP 51971 Nucleotide-binding domain
4 2 1 0 SCOP 53681 Aspartate/glutamate racemase
4 3 3 0 SCOP 63380 Riboflavin synthase domain-like
4 4 1 0 SCOP 63418 MurE/MurF N-terminal domain
4 4 1 0 SCOP 55031 Bacterial exopeptidase dimerisation domain
3 3 2 2 SCOP 53927 Cytidine deaminase-like
3 3 3 0 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
3 3 3 1 SCOP 64182 DHH phosphoesterases
3 3 1 1 SCOP 53784 Phosphofructokinase
3 3 2 0 SCOP 52218 Flavoproteins
3 3 1 2 SCOP 48557 L-aspartase-like
3 3 3 1 SCOP 55821 YrdC/RibB
3 3 2 0 SCOP 51261 Duplicated hybrid motif
3 3 2 0 SCOP 48150 DNA-glycosylase
3 3 2 0 SCOP 54292 2Fe-2S ferredoxin-like
3 3 1 1 SCOP 53254 Phosphoglycerate mutase-like
3 3 2 1 SCOP 51395 FMN-linked oxidoreductases
3 3 2 0 SCOP 48371 ARM repeat
3 3 1 1 SCOP 50475 FMN-binding split barrel
3 2 2 0 SCOP 55469 FMN-dependent nitroreductase-like
3 2 2 1 SCOP 54506 Diaminopimelate epimerase-like
3 3 3 1 SCOP 88713 Glycoside hydrolase/deacetylase
3 3 1 0 SCOP 101960 Stabilizer of iron transporter SufD
3 3 2 2 SCOP 55931 Glutamine synthetase/guanido kinase
3 3 3 0 SCOP 52954 Class II aaRS ABD-related
3 3 1 1 SCOP 158446 IVS-encoded protein-like
3 3 2 0 SCOP 55718 SCP-like
3 3 2 0 SCOP 81901 HCP-like
3 3 3 0 SCOP 50800 PK beta-barrel domain-like
3 2 2 0 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
3 2 2 0 SCOP 51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
3 2 2 0 SCOP 101386 all-alpha NTP pyrophosphatases
3 3 1 2 SCOP 51604 Enolase C-terminal domain-like
3 2 2 0 SCOP 56024 Phospholipase D/nuclease
3 3 1 1 SCOP 75005 Arabinanase/levansucrase/invertase
3 3 1 0 SCOP 82171 DPP6 N-terminal domain-like
3 2 2 0 SCOP 50346 PRC-barrel domain
3 3 2 0 SCOP 53092 Creatinase/prolidase N-terminal domain
3 3 2 0 SCOP 46589 tRNA-binding arm
3 1 1 1 SCOP 55979 DNA clamp
3 1 1 1 SCOP 55973 S-adenosylmethionine synthetase
3 3 3 1 SCOP 48334 DNA repair protein MutS, domain III
3 3 1 1 SCOP 50621 Alanine racemase C-terminal domain-like
3 3 1 1 SCOP 54826 Enolase N-terminal domain-like
3 3 2 0 SCOP 117892 Band 7/SPFH domain
3 3 3 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
3 3 3 0 SCOP 55957 Phosphoglucomutase, C-terminal domain
3 3 3 0 SCOP 81271 TGS-like
3 3 3 1 SCOP 142019 Nqo1 FMN-binding domain-like
2 2 2 1 SCOP 48013 NusB-like
2 2 1 0 SCOP 57829 Zn-binding ribosomal proteins
2 2 2 0 SCOP 81606 PP2C-like
2 2 1 0 SCOP 56112 Protein kinase-like (PK-like)
2 2 1 0 SCOP 111331 NAD kinase/diacylglycerol kinase-like
2 2 1 1 SCOP 53137 Translational machinery components
2 2 1 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
2 2 2 0 SCOP 53597 Dihydrofolate reductase-like
2 2 1 1 SCOP 143800 L28p-like
2 2 1 1 SCOP 75620 Release factor
2 2 1 0 SCOP 47336 ACP-like
2 2 1 1 SCOP 53748 Phosphoglycerate kinase
2 2 1 1 SCOP 50324 Inorganic pyrophosphatase
2 2 1 1 SCOP 47729 IHF-like DNA-binding proteins
2 2 1 1 SCOP 109755 PhoU-like
2 2 1 1 SCOP 82784 OsmC-like
2 2 2 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
2 2 1 1 SCOP 53720 ALDH-like
2 2 1 0 SCOP 56770 HydA/Nqo6-like
2 2 1 0 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
2 2 1 0 SCOP 54285 MoaD/ThiS
2 2 1 1 SCOP 102705 NIF3 (NGG1p interacting factor 3)-like
2 2 1 1 SCOP 81345 ABC transporter involved in vitamin B12 uptake, BtuC
2 2 2 0 SCOP 50182 Sm-like ribonucleoproteins
2 2 1 1 SCOP 51430 NAD(P)-linked oxidoreductase
2 2 2 0 SCOP 55315 L30e-like
2 2 1 0 SCOP 55144 LigT-like
2 2 1 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
2 2 2 0 SCOP 51306 LexA/Signal peptidase
2 2 1 2 SCOP 52972 ITPase-like
2 2 1 0 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
2 2 2 0 SCOP 144091 Rhomboid-like
2 2 1 1 SCOP 111038 YjbQ-like
2 2 2 1 SCOP 102405 MCP/YpsA-like
2 2 1 0 SCOP 143243 Nqo5-like
2 2 1 0 SCOP 143422 Transposase IS200-like
2 2 1 0 SCOP 52091 SpoIIaa-like
2 2 2 1 SCOP 51717 Dihydropteroate synthetase-like
2 2 2 0 SCOP 53795 PEP carboxykinase-like
2 2 2 0 SCOP 46955 Putative DNA-binding domain
2 2 1 0 SCOP 143120 YefM-like
2 2 1 0 SCOP 143011 RelE-like
2 2 2 0 SCOP 57783 Zinc beta-ribbon
2 2 1 0 SCOP 58100 Bacterial hemolysins
2 2 2 0 SCOP 82771 GIY-YIG endonuclease
2 2 1 1 SCOP 53807 "Helical backbone" metal receptor
2 2 2 1 SCOP 51230 Single hybrid motif
2 2 2 1 SCOP 88946 Sigma2 domain of RNA polymerase sigma factors
2 2 2 0 SCOP 46767 Methylated DNA-protein cysteine methyltransferase, C-terminal domain
2 2 1 1 SCOP 89733 L-sulfolactate dehydrogenase-like
2 2 1 0 SCOP 161111 Cation efflux protein transmembrane domain-like
2 2 1 0 SCOP 54913 GlnB-like
2 2 1 1 SCOP 56762 HydB/Nqo4-like
2 2 2 1 SCOP 69065 RNase III domain-like
2 2 2 0 SCOP 54975 Acylphosphatase/BLUF domain-like
2 2 2 1 SCOP 89095 GatB/YqeY motif
2 2 2 1 SCOP 140478 LemA-like
2 2 2 1 SCOP 52335 Methylglyoxal synthase-like
2 1 1 1 SCOP 63411 LuxS/MPP-like metallohydrolase
2 2 1 0 SCOP 143430 TTP0101/SSO1404-like
2 2 1 0 SCOP 140683 SP0561-like
2 2 1 0 SCOP 75138 HprK N-terminal domain-like
2 2 1 0 SCOP 64288 Chorismate lyase-like
2 2 1 1 SCOP 53146 Nitrogenase accessory factor-like
2 2 1 0 SCOP 50199 Staphylococcal nuclease
2 2 2 0 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
2 2 2 0 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
2 2 1 1 SCOP 56003 Molybdenum cofactor-binding domain
2 2 2 0 SCOP 81923 Double Clp-N motif
2 2 2 0 SCOP 54106 LysM domain
2 2 1 0 SCOP 103190 Sensory domain-like
2 2 2 1 SCOP 56719 Type II DNA topoisomerase
2 2 2 1 SCOP 52935 PK C-terminal domain-like
2 2 2 1 SCOP 55816 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
2 1 1 0 SCOP 82679 N-utilization substance G protein NusG, N-terminal domain
2 2 2 0 SCOP 116726 TrkA C-terminal domain-like
2 2 1 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
2 2 2 0 SCOP 142984 Nqo1 middle domain-like
2 2 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
2 2 2 0 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
2 2 1 0 SCOP 55060 GHMP Kinase, C-terminal domain
2 2 1 0 SCOP 54665 CO dehydrogenase molybdoprotein N-domain-like
2 2 2 1 SCOP 53920 Fe-only hydrogenase
2 2 2 0 SCOP 46600 C-terminal UvrC-binding domain of UvrB
2 2 1 0 SCOP 55447 CO dehydrogenase flavoprotein C-terminal domain-like
2 2 1 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
2 2 1 1 SCOP 51984 MurCD N-terminal domain
2 2 2 0 SCOP 54768 dsRNA-binding domain-like
2 2 1 0 SCOP 54373 FAD-linked reductases, C-terminal domain
2 1 1 1 SCOP 56053 Ribosomal protein L6
2 2 1 0 SCOP 47741 CO dehydrogenase ISP C-domain like
2 1 1 1 SCOP 55116 Formiminotransferase domain of formiminotransferase-cyclodeaminase.
2 2 2 0 SCOP 140490 Nqo1C-terminal domain-like
2 1 1 0 SCOP 82693 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
2 2 1 1 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
2 2 2 1 SCOP 88688 Families 57/38 glycoside transferase middle domain
2 2 1 0 SCOP 54368 Glutamine synthetase, N-terminal domain
2 1 1 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
2 1 1 0 SCOP 55666 Ribonuclease PH domain 2-like
2 2 1 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
2 2 2 0 SCOP 56519 Penicillin binding protein dimerisation domain
1 1 1 1 SCOP 56731 DNA primase core
1 1 1 0 SCOP 53790 Tetrapyrrole methylase
1 1 1 1 SCOP 74982 Small protein B (SmpB)
1 1 1 1 SCOP 56808 Ribosomal protein L1
1 1 1 1 SCOP 53178 Peptidyl-tRNA hydrolase-like
1 1 1 1 SCOP 47973 Ribosomal protein S7
1 1 1 0 SCOP 46911 Ribosomal protein S18
1 1 1 1 SCOP 52141 Uracil-DNA glycosylase-like
1 1 1 1 SCOP 75304 Amidase signature (AS) enzymes
1 1 1 0 SCOP 143597 YojJ-like
1 1 1 1 SCOP 56420 Peptide deformylase
1 1 1 1 SCOP 142433 CinA-like
1 1 1 0 SCOP 82607 YbaB-like
1 1 1 0 SCOP 89919 Ribosome-binding factor A, RbfA
1 1 1 1 SCOP 54999 Ribosomal protein S10
1 1 1 1 SCOP 52166 Ribosomal protein L4
1 1 1 0 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
1 1 1 1 SCOP 54570 Ribosomal protein S19
1 1 1 1 SCOP 54843 Ribosomal protein L22
1 1 1 1 SCOP 54686 Ribosomal protein L16p/L10e
1 1 1 1 SCOP 50193 Ribosomal protein L14
1 1 1 1 SCOP 55282 RL5-like
1 1 1 1 SCOP 56047 Ribosomal protein S8
1 1 1 1 SCOP 52080 Ribosomal proteins L15p and L18e
1 1 1 0 SCOP 103491 Preprotein translocase SecY subunit
1 1 1 0 SCOP 57840 Ribosomal protein L36
1 1 1 1 SCOP 46946 S13-like H2TH domain
1 1 1 0 SCOP 64263 Prokaryotic ribosomal protein L17
1 1 1 0 SCOP 143034 L35p-like
1 1 1 1 SCOP 74731 Ribosomal protein L20
1 1 1 0 SCOP 56214 4'-phosphopantetheinyl transferase
1 1 1 1 SCOP 141091 L21p-like
1 1 1 0 SCOP 110324 Ribosomal L27 protein-like
1 1 1 1 SCOP 51695 PLC-like phosphodiesterases
1 1 1 1 SCOP 75625 YebC-like
1 1 1 1 SCOP 82649 SufE/NifU
1 1 1 1 SCOP 160369 Ribosomal protein L10-like
1 1 1 0 SCOP 46992 Ribosomal protein S20
1 1 1 1 SCOP 89623 Ribose/Galactose isomerase RpiB/AlsB
1 1 1 0 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
1 1 1 0 SCOP 81333 F1F0 ATP synthase subunit C
1 1 1 1 SCOP 52161 Ribosomal protein L13
1 1 1 1 SCOP 47060 S15/NS1 RNA-binding domain
1 1 1 1 SCOP 51351 Triosephosphate isomerase (TIM)
1 1 1 1 SCOP 55194 Ribosome recycling factor, RRF
1 1 1 1 SCOP 54565 Ribosomal protein S16
1 1 1 1 SCOP 69765 IpsF-like
1 1 1 1 SCOP 111337 QueA-like
1 1 1 1 SCOP 51713 tRNA-guanine transglycosylase
1 1 1 1 SCOP 50715 Ribosomal protein L25-like
1 1 1 1 SCOP 56276 S-adenosylmethionine decarboxylase
1 1 1 1 SCOP 52313 Ribosomal protein S2
1 1 1 1 SCOP 64005 Undecaprenyl diphosphate synthase
1 1 1 1 SCOP 142695 RibA-like
1 1 1 1 SCOP 55205 EPT/RTPC-like
1 1 1 1 SCOP 55298 YjgF-like
1 1 1 0 SCOP 50685 Barwin-like endoglucanases
1 1 1 1 SCOP 52121 Lumazine synthase
1 1 1 1 SCOP 48576 Terpenoid synthases
1 1 1 0 SCOP 55129 Ribosomal protein L30p/L7e
1 1 1 0 SCOP 46561 Ribosomal protein L29 (L29p)
1 1 1 1 SCOP 54995 Ribosomal protein S6
1 1 1 0 SCOP 49764 HSP20-like chaperones
1 1 1 1 SCOP 52949 Macro domain-like
1 1 1 1 SCOP 50978 WD40 repeat-like
1 1 1 0 SCOP 56801 Acetyl-CoA synthetase-like
1 1 1 1 SCOP 48256 Citrate synthase
1 1 1 1 SCOP 69500 DTD-like
1 1 1 0 SCOP 47226 Histidine-containing phosphotransfer domain, HPT domain
1 1 1 1 SCOP 53590 Nucleoside hydrolase
1 1 1 1 SCOP 53328 Formyltransferase
1 1 1 0 SCOP 52499 Isochorismatase-like hydrolases
1 1 1 0 SCOP 48239 Terpenoid cyclases/Protein prenyltransferases
1 1 1 0 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
1 1 1 1 SCOP 53774 Glutaminase/Asparaginase
1 1 1 0 SCOP 57997 Tropomyosin
1 1 1 1 SCOP 53639 AraD/HMP-PK domain-like
1 1 1 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
1 1 1 0 SCOP 110849 ParB/Sulfiredoxin
1 1 1 0 SCOP 55257 RBP11-like subunits of RNA polymerase
1 1 1 1 SCOP 64153 YjeF N-terminal domain-like
1 1 1 0 SCOP 56399 ADP-ribosylation
1 1 1 1 SCOP 143447 AMMECR1-like
1 1 1 1 SCOP 52768 Arginase/deacetylase
1 1 1 0 SCOP 63562 RPB6/omega subunit-like
1 1 1 0 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
1 1 1 1 SCOP 101478 ADP-ribosylglycohydrolase
1 1 1 1 SCOP 55040 Molybdenum cofactor biosynthesis protein C, MoaC
1 1 1 1 SCOP 69118 AhpD-like
1 1 1 0 SCOP 81324 Voltage-gated potassium channels
1 1 1 0 SCOP 51998 PFL-like glycyl radical enzymes
1 1 1 0 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
1 1 1 1 SCOP 50494 Trypsin-like serine proteases
1 1 1 1 SCOP 52016 LeuD/IlvD-like
1 1 1 1 SCOP 111352 Ammonium transporter
1 1 1 1 SCOP 56266 DmpA/ArgJ-like
1 1 1 1 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
1 1 1 0 SCOP 56349 DNA breaking-rejoining enzymes
1 1 1 0 SCOP 160246 EspE N-terminal domain-like
1 1 1 1 SCOP 55083 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
1 1 1 1 SCOP 103256 Hypothetical protein TM0160
1 1 1 1 SCOP 50692 ADC-like
1 1 1 0 SCOP 50118 Cell growth inhibitor/plasmid maintenance toxic component
1 1 1 1 SCOP 64167 SurE-like
1 1 1 0 SCOP 117782 YbjQ-like
1 1 1 0 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
1 1 1 0 SCOP 141000 Glu-tRNAGln amidotransferase C subunit
1 1 1 0 SCOP 116842 XseB-like
1 1 1 1 SCOP 54736 ClpS-like
1 1 1 0 SCOP 53955 Lysozyme-like
1 1 1 0 SCOP 117856 AF0104/ALDC/Ptd012-like
1 1 1 1 SCOP 69796 Thymidylate synthase-complementing protein Thy1
1 1 1 1 SCOP 53732 Aconitase iron-sulfur domain
1 1 1 1 SCOP 103365 Hypothetical protein PH1602
1 1 1 1 SCOP 52733 Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
1 1 1 0 SCOP 55200 Translation initiation factor IF3, C-terminal domain
1 1 1 0 SCOP 82689 Mechanosensitive channel protein MscS (YggB), C-terminal domain
1 1 1 1 SCOP 117396 TM1631-like
1 1 1 1 SCOP 82544 GckA/TtuD-like
1 1 1 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
1 1 1 1 SCOP 89028 Cobalamin adenosyltransferase-like
1 1 1 0 SCOP 89392 Prokaryotic lipoproteins and lipoprotein localization factors
1 1 1 0 SCOP 55826 YbaK/ProRS associated domain
1 1 1 1 SCOP 103025 Folate-binding domain
1 1 1 1 SCOP 110581 Indigoidine synthase A-like
1 1 1 1 SCOP 143631 ApbE-like
1 1 1 1 SCOP 101262 Methenyltetrahydrofolate cyclohydrolase-like
1 1 1 1 SCOP 56821 Prismane protein-like
1 1 1 0 SCOP 144010 CofE-like
1 1 1 0 SCOP 117457 FumA C-terminal domain-like
1 1 1 0 SCOP 111384 OmpH-like
1 1 1 1 SCOP 53182 Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
1 1 1 1 SCOP 142338 CofD-like
1 1 1 0 SCOP 101473 DhaL-like
1 1 1 1 SCOP 110391 GlpP-like
1 1 1 1 SCOP 111326 Urocanase
1 1 1 0 SCOP 50486 FMT C-terminal domain-like
1 1 1 0 SCOP 75011 3-carboxy-cis,cis-mucoante lactonizing enzyme
1 1 1 0 SCOP 53163 HybD-like
1 1 1 0 SCOP 159127 HupF/HypC-like
1 1 1 0 SCOP 81593 Nucleotidyltransferase substrate binding subunit/domain
1 1 1 0 SCOP 69754 Ribosome binding protein Y (YfiA homologue)
1 1 1 0 SCOP 103007 Hypothetical protein TT1725
1 1 1 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
1 1 1 0 SCOP 102198 Putative cyclase
1 1 1 1 SCOP 63992 Dipeptide transport protein
1 1 1 0 SCOP 46565 Chaperone J-domain
1 1 1 1 SCOP 102546 RbsD-like
1 1 1 1 SCOP 111321 AF1104-like
1 1 1 0 SCOP 160975 AF1531-like
1 1 1 1 SCOP 49367 Superoxide reductase-like
1 1 1 0 SCOP 143437 THUMP domain-like
1 1 1 1 SCOP 52490 Tubulin nucleotide-binding domain-like
1 1 1 0 SCOP 63867 MoeA C-terminal domain-like
1 1 1 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
1 1 1 0 SCOP 48498 Tetracyclin repressor-like, C-terminal domain
1 1 1 1 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
1 1 1 1 SCOP 48024 N-terminal domain of DnaB helicase
1 1 1 0 SCOP 143865 CorA soluble domain-like
1 1 1 1 SCOP 158832 Tex N-terminal region-like
1 1 1 1 SCOP 48592 GroEL equatorial domain-like
1 1 1 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
1 1 1 0 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
1 1 1 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
1 1 1 1 SCOP 142823 ComB-like
1 1 1 0 SCOP 69318 Integrin alpha N-terminal domain
1 1 1 0 SCOP 55103 FAD-linked oxidases, C-terminal domain
1 1 1 0 SCOP 159713 Dhaf3308-like
1 1 1 0 SCOP 55608 Homing endonucleases
1 1 1 1 SCOP 82114 Riboflavin kinase-like
1 1 1 1 SCOP 46906 Ribosomal protein L11, C-terminal domain
1 1 1 0 SCOP 160443 SMR domain-like
1 1 1 0 SCOP 69304 Tricorn protease N-terminal domain
1 1 1 0 SCOP 63825 YWTD domain
1 1 1 1 SCOP 102645 CoaB-like
1 1 1 0 SCOP 56014 Nitrite and sulphite reductase 4Fe-4S domain-like
1 1 1 1 SCOP 159941 MM3350-like
1 1 1 0 SCOP 48537 Phospholipase C/P1 nuclease
1 1 1 1 SCOP 54821 Ribosomal protein S3 C-terminal domain
1 1 1 1 SCOP 48019 post-AAA+ oligomerization domain-like
1 1 1 0 SCOP 81573 F1F0 ATP synthase subunit B, membrane domain
1 1 1 1 SCOP 63848 Cell-division inhibitor MinC, C-terminal domain
1 1 1 0 SCOP 52009 Phosphohistidine domain
1 1 1 0 SCOP 118116 DNA mismatch repair protein MutL
1 1 1 0 SCOP 81336 F1F0 ATP synthase subunit A
1 1 1 0 SCOP 49384 Carbohydrate-binding domain
1 1 1 0 SCOP 47789 C-terminal domain of RNA polymerase alpha subunit
1 1 1 0 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
1 1 1 0 SCOP 55658 L9 N-domain-like
1 1 1 0 SCOP 81665 Calcium ATPase, transmembrane domain M
1 1 1 0 SCOP 52440 PreATP-grasp domain
1 1 1 0 SCOP 158472 HAMP domain-like
1 1 1 0 SCOP 68923 PEP carboxykinase N-terminal domain
1 1 1 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
1 1 1 0 SCOP 69055 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
1 1 1 0 SCOP 49373 Invasin/intimin cell-adhesion fragments
1 1 1 1 SCOP 56037 PheT/TilS domain
1 1 1 1 SCOP 52418 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
1 1 1 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 63999 Thiamin pyrophosphokinase, catalytic domain
1 1 1 1 SCOP 55307 Tubulin C-terminal domain-like
1 1 1 1 SCOP 140990 FtsH protease domain-like
1 1 1 0 SCOP 74853 Lamin A/C globular tail domain
1 1 1 0 SCOP 81585 PsbU/PolX domain-like
1 1 1 1 SCOP 52029 GroEL apical domain-like
1 1 1 0 SCOP 160148 CPE0013-like
1 1 1 0 SCOP 81891 Poly A polymerase C-terminal region-like
1 1 1 0 SCOP 68912 Rho N-terminal domain-like
1 1 1 0 SCOP 56042 PurM C-terminal domain-like
1 1 1 1 SCOP 101904 GyrA/ParC C-terminal domain-like
1 1 1 0 SCOP 52279 Beta-D-glucan exohydrolase, C-terminal domain
1 1 1 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
1 1 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
1 1 1 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
1 1 1 0 SCOP 141322 NfeD domain-like
1 1 1 0 SCOP 48310 Aldehyde ferredoxin oxidoreductase, C-terminal domains
1 1 1 0 SCOP 55326 PurM N-terminal domain-like
1 1 1 0 SCOP 144083 Magnesium transport protein CorA, transmembrane region
1 1 1 0 SCOP 46934 UBA-like
1 1 1 0 SCOP 47648 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
1 1 1 1 SCOP 56327 LDH C-terminal domain-like
1 1 1 1 SCOP 75500 Putative transcriptional regulator TM1602, C-terminal domain
1 1 1 0 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
1 1 1 1 SCOP 63882 MoeA N-terminal region -like
1 1 1 0 SCOP 55945 TATA-box binding protein-like
1 1 1 0 SCOP 52113 BRCT domain
1 1 1 0 SCOP 141259 CarD-like
1 1 1 0 SCOP 53155 Methylated DNA-protein cysteine methyltransferase domain
1 1 1 0 SCOP 82861 Mechanosensitive channel protein MscS (YggB), transmembrane region
1 1 1 0 SCOP 74942 YhbC-like, C-terminal domain
1 1 1 0 SCOP 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
1 1 1 0 SCOP 75420 YhbC-like, N-terminal domain
1 1 1 0 SCOP 54752 RecA protein, C-terminal domain
1 1 1 0 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
1 1 1 0 SCOP 101852 Bacterial fluorinating enzyme, C-terminal domain
1 1 1 0 SCOP 102735 Trigger factor ribosome-binding domain
1 1 1 0 SCOP 54680 Pyrimidine nucleoside phosphorylase C-terminal domain
1 1 1 0 SCOP 159283 Guanosine diphospho-D-mannose pyrophosphorylase/mannose-6-phosphate isomerase linker domain
1 1 1 0 SCOP 46557 GreA transcript cleavage protein, N-terminal domain
1 1 1 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
1 1 1 0 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
1 1 1 1 SCOP 47446 Signal peptide-binding domain
1 1 1 0 SCOP 54991 Anticodon-binding domain of PheRS
1 1 1 0 SCOP 82708 R3H domain
1 1 1 0 SCOP 141986 LD-carboxypeptidase A C-terminal domain-like
1 1 1 1 SCOP 55271 DNA repair protein MutS, domain I
1 1 1 0 SCOP 102522 Bacterial fluorinating enzyme, N-terminal domain
1 1 1 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
1 1 1 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
1 1 1 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
1 1 1 0 SCOP 55261 GAD domain-like
1 1 1 0 SCOP 51269 AFP III-like domain
1 1 1 1 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
1 1 1 0 SCOP 81653 Calcium ATPase, transduction domain A
1 1 1 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
1 1 1 1 SCOP 75553 Smc hinge domain
1 1 1 1 SCOP 56228 Aldehyde ferredoxin oxidoreductase, N-terminal domain
1 1 1 1 SCOP 81886 Helical scaffold and wing domains of SecA
1 1 1 0 SCOP 54849 GroEL-intermediate domain like
1 1 1 0 SCOP 56194 Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
1 1 1 1 SCOP 89000 post-HMGL domain-like
1 1 1 0 SCOP 69008 RecG, N-terminal domain
1 1 1 0 SCOP 63862 Thiamin pyrophosphokinase, substrate-binding domain
1 1 1 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
1 1 1 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 55653 Ribosomal protein L9 C-domain
1 1 1 0 SCOP 101790 Aminomethyltransferase beta-barrel domain
1 1 1 0 SCOP 143517 TRCF domain-like
1 1 1 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 1 0 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
1 1 1 0 SCOP 46929 DNA helicase RuvA subunit, C-terminal domain
1 1 1 0 SCOP 54184 Penicillin-binding protein 2x (pbp-2x), c-terminal domain
1 1 1 0 SCOP 54364 Translation initiation factor IF3, N-terminal domain
1 1 1 1 SCOP 69705 Transcription factor NusA, N-terminal domain
1 1 1 0 SCOP 53150 DNA repair protein MutS, domain II
1 1 1 1 SCOP 81767 Pre-protein crosslinking domain of SecA
1 1 1 0 SCOP 47802 DNA polymerase beta, N-terminal domain-like
1 1 1 1 SCOP 81799 Putative methyltransferase TM0872, insert domain
1 1 1 0 SCOP 102741 Obg GTP-binding protein C-terminal domain
1 1 1 1 SCOP 143856 DeoB insert domain-like
1 1 1 0 SCOP 64043 Cell-division inhibitor MinC, N-terminal domain
1 1 1 0 SCOP 117778 D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain

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The following superfamilies have one or more weak hits:

SCOP superfamily Myosin rod fragments
SCOP superfamily CoA-transferase family III (CaiB/BaiF)
SCOP superfamily Collagen-binding domain
SCOP superfamily Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
SCOP superfamily Myosin phosphatase inhibitor 17kDa protein, CPI-17
SCOP superfamily a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
SCOP superfamily Protein serine/threonine phosphatase 2C, C-terminal domain
SCOP superfamily Bacterial photosystem II reaction centre, L and M subunits
SCOP superfamily Cytochrome c oxidase subunit I-like
SCOP superfamily Skp1 dimerisation domain-like
SCOP superfamily Transmembrane di-heme cytochromes
SCOP superfamily Clc chloride channel
SCOP superfamily Gated mechanosensitive channel
SCOP superfamily Rad50 coiled-coil Zn hook
SCOP superfamily Mitotic arrest deficient-like 1, Mad1
SCOP superfamily Type I dockerin domain
SCOP superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain
SCOP superfamily Fibritin
SCOP superfamily SNARE fusion complex
SCOP superfamily FYVE/PHD zinc finger
SCOP superfamily Aerolisin/ETX pore-forming domain
SCOP superfamily Colicin
SCOP superfamily Reovirus inner layer core protein p3
SCOP superfamily Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
SCOP superfamily DNA topoisomerase IV, alpha subunit
SCOP superfamily Serpins
SCOP superfamily Sporulation response regulatory protein Spo0B
SCOP superfamily CytB endotoxin-like
SCOP superfamily tRNA-intron endonuclease N-terminal domain-like
SCOP superfamily RuBisCO, small subunit
SCOP superfamily Chromo domain-like
SCOP superfamily FucI/AraA N-terminal and middle domains
SCOP superfamily Formate dehydrogenase/DMSO reductase, domains 1-3
SCOP superfamily Caspase-like
SCOP superfamily Rudiment single hybrid motif
SCOP superfamily Carboxypeptidase regulatory domain-like
SCOP superfamily Purple acid phosphatase, N-terminal domain
SCOP superfamily Cadherin-like
SCOP superfamily PKD domain
SCOP superfamily Immunoglobulin
SCOP superfamily Heme oxygenase-like
SCOP superfamily gene 59 helicase assembly protein
SCOP superfamily Uteroglobin-like
SCOP superfamily FliG
SCOP superfamily DEATH domain
SCOP superfamily Annexin
SCOP superfamily t-snare proteins
SCOP superfamily GST C-terminal domain-like
SCOP superfamily Ribbon-helix-helix
SCOP superfamily EF-hand
SCOP superfamily Tubulin chaperone cofactor A
SCOP superfamily Spectrin repeat
SCOP superfamily Epsilon subunit of F1F0-ATP synthase C-terminal domain
SCOP superfamily YfgJ-like
SCOP superfamily Photosystem II antenna protein-like
SCOP superfamily SSO1389-like
SCOP superfamily FLJ32549 C-terminal domain-like
SCOP superfamily BT0923-like
SCOP superfamily XCC0632-like
SCOP superfamily RbcX-like
SCOP superfamily BH3980-like
SCOP superfamily BH2638-like
SCOP superfamily YqgQ-like
SCOP superfamily FdhE-like
SCOP superfamily YkuJ-like
SCOP superfamily TM1622-like
SCOP superfamily CAC2185-like
SCOP superfamily L,D-transpeptidase catalytic domain-like
SCOP superfamily PriB N-terminal domain-like
SCOP superfamily Rv1873-like
SCOP superfamily Hyaluronidase post-catalytic domain-like
SCOP superfamily MukF C-terminal domain-like
SCOP superfamily Proton glutamate symport protein
SCOP superfamily Hook domain
SCOP superfamily Coronavirus S2 glycoprotein
SCOP superfamily Recombination protein RecR
SCOP superfamily Sporulation related repeat
SCOP superfamily Bacteriocin immunity protein-like
SCOP superfamily BAR/IMD domain-like
SCOP superfamily CCHHC domain
SCOP superfamily Preprotein translocase SecE subunit
SCOP superfamily 2-methylcitrate dehydratase PrpD
SCOP superfamily Cell division protein ZapA-like
SCOP superfamily NHL repeat
SCOP superfamily SPOC domain-like

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