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Treponema pallidum subsp. pallidum SS14 superfamily assignments

Taxonomy
Taxonomy browser entry

Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Spirochaetaceae; Treponema; Treponema pallidum; Treponema pallidum subsp. pallidum; Treponema pallidum subsp. pallidum SS14

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Fasta format sequences
Domain assignments


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Assignment statistics

Sequences: 2001 total
1284 (64 %) with assignment
348 average length
57 % amino acid coverage
Domains: 1982 total
427 unique superfamilies
194 unique families
308 average length
4.6 average superfamily size
78 % formed by duplication
Domain combinations: 221 domain pairs
487 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies

208 174 47 6 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
72 51 12 0 SCOP 48452 TPR-like
48 36 14 2 SCOP 50249 Nucleic acid-binding proteins
34 18 4 2 SCOP 53067 Actin-like ATPase domain
30 28 12 5 SCOP 54211 Ribosomal protein S5 domain 2-like
28 24 10 4 SCOP 51735 NAD(P)-binding Rossmann-fold domains
26 26 9 2 SCOP 52374 Nucleotidylyl transferase
26 26 11 1 SCOP 55681 Class II aaRS and biotin synthetases
22 22 6 1 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
16 16 3 1 SCOP 53850 Periplasmic binding protein-like II
16 14 6 2 SCOP 50447 Translation proteins
14 12 3 1 SCOP 161098 MetI-like
14 10 4 0 SCOP 50156 PDZ domain-like
14 10 4 0 SCOP 54106 LysM domain
13 13 6 0 SCOP 51261 Duplicated hybrid motif
13 13 3 0 SCOP 109604 HD-domain/PDEase-like
12 10 4 0 SCOP 53271 PRTase-like
12 12 4 3 SCOP 55120 Pseudouridine synthase
12 12 3 2 SCOP 53383 PLP-dependent transferases
12 12 2 0 SCOP 102114 Radical SAM enzymes
12 8 3 0 SCOP 88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors
12 12 3 0 SCOP 56176 FAD-binding/transporter-associated domain-like
12 12 6 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
12 6 2 0 SCOP 54980 EF-G C-terminal domain-like
10 10 3 4 SCOP 51569 Aldolase
10 10 2 0 SCOP 56784 HAD-like
10 10 4 2 SCOP 50104 Translation proteins SH3-like domain
10 10 5 0 SCOP 46785 "Winged helix" DNA-binding domain
10 6 3 4 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
10 10 4 3 SCOP 53098 Ribonuclease H-like
10 10 4 2 SCOP 75217 alpha/beta knot
10 8 3 2 SCOP 52096 ClpP/crotonase
10 10 1 1 SCOP 64518 Phase 1 flagellin
10 10 2 1 SCOP 54631 CBS-domain pair
10 10 5 3 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
10 8 4 0 SCOP 51206 cAMP-binding domain-like
10 8 4 0 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
10 10 4 0 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
10 8 3 1 SCOP 58104 Methyl-accepting chemotaxis protein (MCP) signaling domain
10 10 4 1 SCOP 53623 MurD-like peptide ligases, catalytic domain
9 9 2 1 SCOP 53822 Periplasmic binding protein-like I
8 8 4 1 SCOP 53448 Nucleotide-diphospho-sugar transferases
8 8 2 1 SCOP 52833 Thioredoxin-like
8 6 2 0 SCOP 64182 DHH phosphoesterases
8 8 5 1 SCOP 54534 FKBP-like
8 4 2 1 SCOP 48403 Ankyrin repeat
8 8 4 0 SCOP 56601 beta-lactamase/transpeptidase-like
8 8 3 1 SCOP 88946 Sigma2 domain of RNA polymerase sigma factors
8 2 1 1 SCOP 63411 LuxS/MPP-like metallohydrolase
8 8 4 0 SCOP 47781 RuvA domain 2-like
8 6 2 0 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
8 6 2 0 SCOP 116726 TrkA C-terminal domain-like
8 4 1 1 SCOP 48029 FliG
8 4 2 0 SCOP 53738 Phosphoglucomutase, first 3 domains
7 7 3 1 SCOP 46565 Chaperone J-domain
6 6 1 1 SCOP 51556 Metallo-dependent hydrolases
6 6 3 1 SCOP 56059 Glutathione synthetase ATP-binding domain-like
6 6 1 0 SCOP 53474 alpha/beta-Hydrolases
6 6 3 1 SCOP 52317 Class I glutamine amidotransferase-like
6 6 1 1 SCOP 53167 Purine and uridine phosphorylases
6 6 3 0 SCOP 51905 FAD/NAD(P)-binding domain
6 6 2 0 SCOP 81606 PP2C-like
6 6 3 0 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
6 6 3 1 SCOP 56300 Metallo-dependent phosphatases
6 6 2 0 SCOP 100950 NagB/RpiA/CoA transferase-like
6 6 3 1 SCOP 55174 Alpha-L RNA-binding motif
6 6 3 1 SCOP 52402 Adenine nucleotide alpha hydrolases-like
6 6 1 1 SCOP 56281 Metallo-hydrolase/oxidoreductase
6 6 2 0 SCOP 81345 ABC transporter involved in vitamin B12 uptake, BtuC
6 6 2 1 SCOP 117143 Flagellar hook protein flgE
6 6 2 0 SCOP 48371 ARM repeat
6 4 2 0 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
6 6 3 0 SCOP 56317 Carbon-nitrogen hydrolase
6 4 2 0 SCOP 51306 LexA/Signal peptidase
6 6 3 0 SCOP 52954 Class II aaRS ABD-related
6 6 3 0 SCOP 52172 CheY-like
6 6 2 0 SCOP 52091 SpoIIaa-like
6 6 2 1 SCOP 50494 Trypsin-like serine proteases
6 6 3 0 SCOP 50341 CheW-like
6 6 3 1 SCOP 81301 Nucleotidyltransferase
6 6 3 0 SCOP 53300 vWA-like
6 6 3 1 SCOP 53955 Lysozyme-like
6 6 1 0 SCOP 103088 OmpA-like
6 6 3 0 SCOP 103039 CheC-like
6 6 3 1 SCOP 55186 ThrRS/AlaRS common domain
6 6 2 1 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
6 2 1 0 SCOP 55979 DNA clamp
6 6 2 0 SCOP 81923 Double Clp-N motif
6 6 3 1 SCOP 52922 TK C-terminal domain-like
6 2 1 1 SCOP 55973 S-adenosylmethionine synthetase
6 6 3 3 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
6 2 1 0 SCOP 52113 BRCT domain
6 6 3 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
5 5 2 0 SCOP 52980 Restriction endonuclease-like
5 5 3 2 SCOP 55073 Nucleotide cyclase
4 4 1 0 SCOP 57829 Zn-binding ribosomal proteins
4 2 1 0 SCOP 53790 Tetrapyrrole methylase
4 4 2 2 SCOP 53697 SIS domain
4 4 1 1 SCOP 53137 Translational machinery components
4 4 2 1 SCOP 55920 Creatinase/aminopeptidase
4 4 1 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
4 4 1 1 SCOP 53784 Phosphofructokinase
4 4 1 2 SCOP 47240 Ferritin-like
4 4 1 0 SCOP 143800 L28p-like
4 4 1 1 SCOP 75620 Release factor
4 4 2 0 SCOP 109998 Triger factor/SurA peptide-binding domain-like
4 4 2 0 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
4 4 1 0 SCOP 53633 Carbamate kinase-like
4 4 1 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
4 4 2 2 SCOP 48150 DNA-glycosylase
4 4 1 1 SCOP 51395 FMN-linked oxidoreductases
4 4 2 1 SCOP 88713 Glycoside hydrolase/deacetylase
4 4 1 0 SCOP 101960 Stabilizer of iron transporter SufD
4 4 2 2 SCOP 53795 PEP carboxykinase-like
4 4 2 0 SCOP 47413 lambda repressor-like DNA-binding domains
4 4 2 0 SCOP 57783 Zinc beta-ribbon
4 4 1 1 SCOP 53807 "Helical backbone" metal receptor
4 4 1 1 SCOP 56349 DNA breaking-rejoining enzymes
4 4 2 0 SCOP 55166 Hedgehog/DD-peptidase
4 4 2 1 SCOP 56219 DNase I-like
4 4 2 0 SCOP 88697 PUA domain-like
4 2 1 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
4 4 1 0 SCOP 118215 Proton glutamate symport protein
4 4 1 0 SCOP 55804 Phoshotransferase/anion transport protein
4 4 2 1 SCOP 101801 Surface presentation of antigens (SPOA)
4 4 1 0 SCOP 56925 OMPA-like
4 4 1 0 SCOP 50331 MOP-like
4 4 2 0 SCOP 46548 alpha-helical ferredoxin
4 2 1 0 SCOP 53092 Creatinase/prolidase N-terminal domain
4 4 2 0 SCOP 46589 tRNA-binding arm
4 4 2 0 SCOP 160544 EscU C-terminal domain-like
4 4 2 1 SCOP 56719 Type II DNA topoisomerase
4 4 2 0 SCOP 52440 PreATP-grasp domain
4 2 1 0 SCOP 53681 Aspartate/glutamate racemase
4 4 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
4 4 2 0 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
4 4 1 0 SCOP 55060 GHMP Kinase, C-terminal domain
4 4 2 0 SCOP 81891 Poly A polymerase C-terminal region-like
4 4 2 0 SCOP 46600 C-terminal UvrC-binding domain of UvrB
4 4 2 0 SCOP 63418 MurE/MurF N-terminal domain
4 4 1 0 SCOP 51984 MurCD N-terminal domain
4 4 2 0 SCOP 54768 dsRNA-binding domain-like
4 4 2 0 SCOP 141259 CarD-like
4 2 1 0 SCOP 56053 Ribosomal protein L6
4 4 1 0 SCOP 117892 Band 7/SPFH domain
4 2 1 0 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
4 2 1 1 SCOP 55666 Ribonuclease PH domain 2-like
4 4 2 0 SCOP 160527 V-type ATPase subunit E-like
4 4 2 0 SCOP 56519 Penicillin binding protein dimerisation domain
4 2 1 1 SCOP 81986 Tp47 lipoprotein, middle and C-terminal domains
3 3 2 1 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
3 3 2 0 SCOP 55781 GAF domain-like
3 3 2 0 SCOP 48019 post-AAA+ oligomerization domain-like
3 3 2 0 SCOP 52009 Phosphohistidine domain
3 3 2 0 SCOP 49265 Fibronectin type III
3 3 2 0 SCOP 110997 Sporulation related repeat
2 2 1 0 SCOP 56731 DNA primase core
2 2 1 0 SCOP 48013 NusB-like
2 2 1 0 SCOP 55594 HPr-like
2 2 1 0 SCOP 53927 Cytidine deaminase-like
2 2 1 1 SCOP 74982 Small protein B (SmpB)
2 2 1 1 SCOP 53613 Ribokinase-like
2 2 1 1 SCOP 56808 Ribosomal protein L1
2 2 1 1 SCOP 53178 Peptidyl-tRNA hydrolase-like
2 2 1 1 SCOP 47973 Ribosomal protein S7
2 2 1 0 SCOP 46911 Ribosomal protein S18
2 2 1 1 SCOP 52141 Uracil-DNA glycosylase-like
2 2 1 1 SCOP 75304 Amidase signature (AS) enzymes
2 2 1 1 SCOP 143597 YojJ-like
2 2 1 1 SCOP 56420 Peptide deformylase
2 2 1 0 SCOP 56112 Protein kinase-like (PK-like)
2 2 1 1 SCOP 51366 Ribulose-phoshate binding barrel
2 2 1 1 SCOP 111331 NAD kinase/diacylglycerol kinase-like
2 2 1 0 SCOP 89919 Ribosome-binding factor A, RbfA
2 2 1 1 SCOP 54999 Ribosomal protein S10
2 2 1 1 SCOP 52166 Ribosomal protein L4
2 2 1 0 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
2 2 1 1 SCOP 54570 Ribosomal protein S19
2 2 1 0 SCOP 54843 Ribosomal protein L22
2 2 1 1 SCOP 54686 Ribosomal protein L16p/L10e
2 2 1 1 SCOP 50193 Ribosomal protein L14
2 2 1 1 SCOP 55282 RL5-like
2 2 1 1 SCOP 56047 Ribosomal protein S8
2 2 1 0 SCOP 52080 Ribosomal proteins L15p and L18e
2 2 1 0 SCOP 103491 Preprotein translocase SecY subunit
2 2 1 1 SCOP 46946 S13-like H2TH domain
2 2 1 1 SCOP 64263 Prokaryotic ribosomal protein L17
2 2 1 0 SCOP 143034 L35p-like
2 2 1 1 SCOP 74731 Ribosomal protein L20
2 2 1 0 SCOP 56214 4'-phosphopantetheinyl transferase
2 2 1 0 SCOP 89447 AbrB/MazE/MraZ-like
2 2 1 0 SCOP 52218 Flavoproteins
2 2 1 0 SCOP 141091 L21p-like
2 2 1 0 SCOP 118010 TM1457-like
2 2 1 0 SCOP 110324 Ribosomal L27 protein-like
2 2 1 0 SCOP 47336 ACP-like
2 2 1 1 SCOP 51695 PLC-like phosphodiesterases
2 2 1 0 SCOP 103473 MFS general substrate transporter
2 2 1 1 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
2 2 1 1 SCOP 53748 Phosphoglycerate kinase
2 2 1 1 SCOP 75625 YebC-like
2 2 1 0 SCOP 82649 SufE/NifU
2 2 1 0 SCOP 47729 IHF-like DNA-binding proteins
2 2 1 0 SCOP 160369 Ribosomal protein L10-like
2 2 1 0 SCOP 46992 Ribosomal protein S20
2 2 1 0 SCOP 50129 GroES-like
2 2 1 0 SCOP 81333 F1F0 ATP synthase subunit C
2 2 1 1 SCOP 55068 Peptide methionine sulfoxide reductase
2 2 1 0 SCOP 109755 PhoU-like
2 2 1 1 SCOP 52161 Ribosomal protein L13
2 2 1 0 SCOP 47060 S15/NS1 RNA-binding domain
2 2 1 1 SCOP 51351 Triosephosphate isomerase (TIM)
2 2 1 1 SCOP 55194 Ribosome recycling factor, RRF
2 2 1 0 SCOP 54565 Ribosomal protein S16
2 2 1 1 SCOP 51316 Mss4-like
2 2 1 1 SCOP 69765 IpsF-like
2 2 1 0 SCOP 51161 Trimeric LpxA-like enzymes
2 2 1 0 SCOP 55821 YrdC/RibB
2 2 1 1 SCOP 53720 ALDH-like
2 2 1 1 SCOP 51283 dUTPase-like
2 2 1 0 SCOP 54862 4Fe-4S ferredoxins
2 2 1 0 SCOP 50715 Ribosomal protein L25-like
2 2 1 0 SCOP 54292 2Fe-2S ferredoxin-like
2 2 1 0 SCOP 55811 Nudix
2 2 1 0 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
2 2 1 1 SCOP 52313 Ribosomal protein S2
2 2 1 1 SCOP 64005 Undecaprenyl diphosphate synthase
2 2 1 0 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
2 2 1 1 SCOP 102705 NIF3 (NGG1p interacting factor 3)-like
2 2 1 1 SCOP 53254 Phosphoglycerate mutase-like
2 2 1 1 SCOP 55205 EPT/RTPC-like
2 2 1 0 SCOP 140566 FlgN-like
2 2 1 0 SCOP 46689 Homeodomain-like
2 2 1 0 SCOP 117130 CsrA-like
2 2 2 0 SCOP 50685 Barwin-like endoglucanases
2 2 1 0 SCOP 48576 Terpenoid synthases
2 2 1 0 SCOP 55129 Ribosomal protein L30p/L7e
2 2 1 0 SCOP 46561 Ribosomal protein L29 (L29p)
2 2 1 1 SCOP 51419 PLP-binding barrel
2 2 1 0 SCOP 54995 Ribosomal protein S6
2 2 1 0 SCOP 53187 Zn-dependent exopeptidases
2 2 1 1 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
2 2 1 0 SCOP 50182 Sm-like ribonucleoproteins
2 2 1 1 SCOP 56801 Acetyl-CoA synthetase-like
2 2 1 0 SCOP 55315 L30e-like
2 2 1 1 SCOP 56672 DNA/RNA polymerases
2 2 1 0 SCOP 81296 E set domains
2 2 1 0 SCOP 47226 Histidine-containing phosphotransfer domain, HPT domain
2 2 1 1 SCOP 50891 Cyclophilin-like
2 2 1 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
2 2 1 1 SCOP 88723 PIN domain-like
2 2 1 1 SCOP 53328 Formyltransferase
2 2 1 1 SCOP 54001 Cysteine proteinases
2 2 1 0 SCOP 52499 Isochorismatase-like hydrolases
2 2 1 0 SCOP 159468 AtpF-like
2 2 1 0 SCOP 51445 (Trans)glycosidases
2 2 1 0 SCOP 74650 Galactose mutarotase-like
2 2 1 0 SCOP 57997 Tropomyosin
2 2 1 0 SCOP 54928 RNA-binding domain, RBD
2 2 1 0 SCOP 52972 ITPase-like
2 2 1 0 SCOP 48208 Six-hairpin glycosidases
2 2 1 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
2 2 1 0 SCOP 110849 ParB/Sulfiredoxin
2 2 1 0 SCOP 103486 V-type ATP synthase subunit C
2 2 1 0 SCOP 55257 RBP11-like subunits of RNA polymerase
2 2 1 0 SCOP 55008 HMA, heavy metal-associated domain
2 2 1 0 SCOP 58113 Apolipoprotein A-I
2 2 1 0 SCOP 52266 SGNH hydrolase
2 2 1 0 SCOP 52151 FabD/lysophospholipase-like
2 2 1 0 SCOP 52058 L domain-like
2 2 1 0 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
2 2 1 0 SCOP 63562 RPB6/omega subunit-like
2 2 1 1 SCOP 55931 Glutamine synthetase/guanido kinase
2 2 1 0 SCOP 144091 Rhomboid-like
2 2 1 0 SCOP 102405 MCP/YpsA-like
2 2 1 1 SCOP 51998 PFL-like glycyl radical enzymes
2 2 1 0 SCOP 141571 Pentapeptide repeat-like
2 2 1 0 SCOP 46955 Putative DNA-binding domain
2 2 1 0 SCOP 82771 GIY-YIG endonuclease
2 2 1 0 SCOP 51230 Single hybrid motif
2 2 1 0 SCOP 46767 Methylated DNA-protein cysteine methyltransferase, C-terminal domain
2 2 1 0 SCOP 89550 PHP domain-like
2 2 1 1 SCOP 64167 SurE-like
2 2 1 0 SCOP 54736 ClpS-like
2 2 1 1 SCOP 111304 Recombination protein RecR
2 2 1 1 SCOP 69796 Thymidylate synthase-complementing protein Thy1
2 2 1 0 SCOP 69065 RNase III domain-like
2 2 1 0 SCOP 55200 Translation initiation factor IF3, C-terminal domain
2 2 1 0 SCOP 82689 Mechanosensitive channel protein MscS (YggB), C-terminal domain
2 2 1 0 SCOP 111369 HlyD-like secretion proteins
2 2 1 0 SCOP 102829 Cell division protein ZapA-like
2 2 1 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
2 2 1 0 SCOP 51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
2 2 1 0 SCOP 89095 GatB/YqeY motif
2 2 1 0 SCOP 89392 Prokaryotic lipoproteins and lipoprotein localization factors
2 2 1 0 SCOP 55826 YbaK/ProRS associated domain
2 2 1 0 SCOP 101386 all-alpha NTP pyrophosphatases
2 2 1 1 SCOP 140478 LemA-like
2 2 1 0 SCOP 48295 TrpR-like
2 2 1 1 SCOP 53323 Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
2 2 1 1 SCOP 143631 ApbE-like
2 2 1 0 SCOP 57802 Rubredoxin-like
2 2 1 0 SCOP 111384 OmpH-like
2 2 1 0 SCOP 161070 SNF-like
2 2 1 0 SCOP 75138 HprK N-terminal domain-like
2 2 1 0 SCOP 101116 Flagellar export chaperone FliS
2 2 1 0 SCOP 141457 BH3618-like
2 2 1 0 SCOP 50486 FMT C-terminal domain-like
2 2 1 1 SCOP 51604 Enolase C-terminal domain-like
2 2 1 0 SCOP 103247 TT1751-like
2 2 1 0 SCOP 50939 Sialidases
2 2 1 0 SCOP 82171 DPP6 N-terminal domain-like
2 2 1 1 SCOP 52738 Methylesterase CheB, C-terminal domain
2 2 1 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
2 2 1 0 SCOP 109709 KorB DNA-binding domain-like
2 2 1 0 SCOP 158791 MgtE N-terminal domain-like
2 2 1 0 SCOP 50346 PRC-barrel domain
2 2 1 0 SCOP 49367 Superoxide reductase-like
2 2 1 0 SCOP 143437 THUMP domain-like
2 2 1 1 SCOP 52490 Tubulin nucleotide-binding domain-like
2 2 1 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
2 2 1 0 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
2 2 1 0 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
2 2 1 0 SCOP 48024 N-terminal domain of DnaB helicase
2 2 1 0 SCOP 56003 Molybdenum cofactor-binding domain
2 2 1 1 SCOP 158832 Tex N-terminal region-like
2 2 1 1 SCOP 48592 GroEL equatorial domain-like
2 2 1 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
2 2 1 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
2 2 1 0 SCOP 101898 NHL repeat
2 2 1 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
2 2 1 0 SCOP 160443 SMR domain-like
2 2 1 0 SCOP 63825 YWTD domain
2 2 1 0 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
2 2 1 0 SCOP 56014 Nitrite and sulphite reductase 4Fe-4S domain-like
2 2 1 0 SCOP 158397 TM1646-like
2 2 1 0 SCOP 103190 Sensory domain-like
2 2 1 1 SCOP 54821 Ribosomal protein S3 C-terminal domain
2 2 1 0 SCOP 109635 DnaK suppressor protein DksA, alpha-hairpin domain
2 2 1 0 SCOP 118116 DNA mismatch repair protein MutL
2 2 1 0 SCOP 47789 C-terminal domain of RNA polymerase alpha subunit
2 2 1 0 SCOP 51971 Nucleotide-binding domain
2 2 1 0 SCOP 55658 L9 N-domain-like
2 2 1 0 SCOP 81665 Calcium ATPase, transmembrane domain M
2 2 1 1 SCOP 55816 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
2 2 1 0 SCOP 158472 HAMP domain-like
2 2 1 1 SCOP 68923 PEP carboxykinase N-terminal domain
2 2 1 0 SCOP 82679 N-utilization substance G protein NusG, N-terminal domain
2 2 1 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
2 2 1 0 SCOP 69055 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
2 2 1 0 SCOP 56037 PheT/TilS domain
2 2 1 1 SCOP 48334 DNA repair protein MutS, domain III
2 2 1 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
2 2 1 0 SCOP 55383 Copper amine oxidase, domain N
2 2 1 0 SCOP 63999 Thiamin pyrophosphokinase, catalytic domain
2 2 1 1 SCOP 161093 MgtE membrane domain-like
2 2 1 1 SCOP 55307 Tubulin C-terminal domain-like
2 2 1 1 SCOP 140990 FtsH protease domain-like
2 2 1 0 SCOP 142984 Nqo1 middle domain-like
2 2 1 0 SCOP 50621 Alanine racemase C-terminal domain-like
2 2 1 1 SCOP 54826 Enolase N-terminal domain-like
2 2 1 1 SCOP 52029 GroEL apical domain-like
2 2 1 0 SCOP 54665 CO dehydrogenase molybdoprotein N-domain-like
2 2 1 0 SCOP 47979 Iron-dependent repressor protein, dimerization domain
2 2 1 1 SCOP 101904 GyrA/ParC C-terminal domain-like
2 2 1 0 SCOP 57863 ArfGap/RecO-like zinc finger
2 2 1 0 SCOP 63380 Riboflavin synthase domain-like
2 2 1 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
2 2 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
2 2 1 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
2 2 1 0 SCOP 46934 UBA-like
2 2 1 0 SCOP 47794 Rad51 N-terminal domain-like
2 2 1 0 SCOP 53155 Methylated DNA-protein cysteine methyltransferase domain
2 2 1 0 SCOP 82861 Mechanosensitive channel protein MscS (YggB), transmembrane region
2 2 1 0 SCOP 47741 CO dehydrogenase ISP C-domain like
2 2 1 0 SCOP 75420 YhbC-like, N-terminal domain
2 2 1 0 SCOP 54752 RecA protein, C-terminal domain
2 2 1 0 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
2 2 1 0 SCOP 55957 Phosphoglucomutase, C-terminal domain
2 2 1 0 SCOP 102735 Trigger factor ribosome-binding domain
2 2 2 0 SCOP 46557 GreA transcript cleavage protein, N-terminal domain
2 2 1 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
2 2 1 0 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
2 2 1 0 SCOP 47446 Signal peptide-binding domain
2 2 1 0 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
2 2 1 0 SCOP 82708 R3H domain
2 2 1 0 SCOP 141986 LD-carboxypeptidase A C-terminal domain-like
2 2 1 1 SCOP 55271 DNA repair protein MutS, domain I
2 2 1 0 SCOP 81271 TGS-like
2 2 1 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
2 2 1 0 SCOP 88688 Families 57/38 glycoside transferase middle domain
2 2 1 0 SCOP 55261 GAD domain-like
2 2 1 0 SCOP 47757 Chemotaxis receptor methyltransferase CheR, N-terminal domain
2 1 1 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
2 2 1 0 SCOP 110942 HSP90 C-terminal domain
2 2 1 0 SCOP 81653 Calcium ATPase, transduction domain A
2 2 1 0 SCOP 54747 Ribosomal L11/L12e N-terminal domain
2 2 1 0 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
2 2 1 0 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
2 2 1 1 SCOP 81886 Helical scaffold and wing domains of SecA
2 2 1 0 SCOP 54849 GroEL-intermediate domain like
2 2 1 0 SCOP 56194 Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
2 2 1 1 SCOP 89000 post-HMGL domain-like
2 2 1 0 SCOP 63862 Thiamin pyrophosphokinase, substrate-binding domain
2 2 1 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
2 2 1 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
2 2 1 0 SCOP 55653 Ribosomal protein L9 C-domain
2 2 1 0 SCOP 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain
2 2 1 0 SCOP 143517 TRCF domain-like
2 2 1 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
2 2 1 0 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
2 2 1 0 SCOP 54184 Penicillin-binding protein 2x (pbp-2x), c-terminal domain
2 2 1 0 SCOP 54364 Translation initiation factor IF3, N-terminal domain
2 2 1 0 SCOP 69705 Transcription factor NusA, N-terminal domain
2 2 1 0 SCOP 53150 DNA repair protein MutS, domain II
2 2 1 1 SCOP 81767 Pre-protein crosslinking domain of SecA
2 2 1 0 SCOP 81799 Putative methyltransferase TM0872, insert domain
2 2 1 0 SCOP 55052 CheY-binding domain of CheA
2 2 1 0 SCOP 46915 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
2 2 1 0 SCOP 57770 Methionyl-tRNA synthetase (MetRS), Zn-domain
2 2 1 1 SCOP 82220 Tp47 lipoprotein, N-terminal domain
1 1 1 0 SCOP 57840 Ribosomal protein L36
1 1 1 0 SCOP 49899 Concanavalin A-like lectins/glucanases
1 1 1 0 SCOP 56954 Outer membrane efflux proteins (OEP)
1 1 1 0 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
1 1 1 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
1 1 1 0 SCOP 47831 Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain

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The following superfamilies have one or more weak hits:

SCOP superfamily Myosin rod fragments
SCOP superfamily ABC transporter transmembrane region
SCOP superfamily GckA/TtuD-like
SCOP superfamily N-utilization substance G protein NusG, insert domain
SCOP superfamily F1F0 ATP synthase subunit B, membrane domain
SCOP superfamily Cytochrome c oxidase subunit III-like
SCOP superfamily Chemotaxis phosphatase CheZ
SCOP superfamily Mitotic arrest deficient-like 1, Mad1
SCOP superfamily YhbC-like, C-terminal domain
SCOP superfamily Tricorn protease N-terminal domain
SCOP superfamily Penicillin-binding protein associated domain
SCOP superfamily Hypothetical protein YjbJ
SCOP superfamily alpha-ketoacid dehydrogenase kinase, N-terminal domain
SCOP superfamily Rho N-terminal domain-like
SCOP superfamily Cell-division inhibitor MinC, C-terminal domain
SCOP superfamily Bacterial hemolysins
SCOP superfamily N-terminal coiled coil domain from apc
SCOP superfamily XRCC4, C-terminal oligomerization domain
SCOP superfamily RING/U-box
SCOP superfamily Retrovirus zinc finger-like domains
SCOP superfamily Snake toxin-like
SCOP superfamily Porins
SCOP superfamily AFP III-like domain
SCOP superfamily RCC1/BLIP-II
SCOP superfamily WD40 repeat-like
SCOP superfamily C-terminal domain of transcriptional repressors
SCOP superfamily Carboxypeptidase regulatory domain-like
SCOP superfamily Nuclear receptor ligand-binding domain
SCOP superfamily Bacterial muramidases
SCOP superfamily LigA subunit of an aromatic-ring-opening dioxygenase LigAB
SCOP superfamily Homodimeric domain of signal transducing histidine kinase
SCOP superfamily DNA helicase RuvA subunit, C-terminal domain
SCOP superfamily T-antigen specific domain-like
SCOP superfamily Photosystem II reaction center protein I, PsbI
SCOP superfamily Lipase chaperone-like
SCOP superfamily PSPTO4464-like
SCOP superfamily CSL zinc finger
SCOP superfamily L,D-transpeptidase catalytic domain-like
SCOP superfamily PilZ domain-like
SCOP superfamily Atu1913-like
SCOP superfamily Glu-tRNAGln amidotransferase C subunit
SCOP superfamily Dcp2 domain-like
SCOP superfamily Nqo1C-terminal domain-like
SCOP superfamily MIT domain
SCOP superfamily VPS9 domain
SCOP superfamily Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain
SCOP superfamily Autotransporter
SCOP superfamily 2-methylcitrate dehydratase PrpD
SCOP superfamily NinB
SCOP superfamily Anti-sigma factor FlgM
SCOP superfamily Invasion protein A (SipA) , C-terminal actin binding domain

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