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  Home > Genomes > Superfamily assignments for Actinidia chinensis Hongyang


Actinidia chinensis Hongyang superfamily assignments

Taxonomy
Taxonomy browser entry

Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia; Actinidia chinensis

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Fasta format sequences
Domain assignments

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Assignment statistics

Sequences: 39040 total
20028 (51 %) with assignment
357 average length
40 % amino acid coverage
Domains: 28961 total
945 unique superfamilies
720 unique families
279 average length
30.6 average superfamily size
97 % formed by duplication
Domain combinations: 1575 domain pairs
4588 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies
1659 1420 343 11 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
1485 1449 251 4 SCOP 56112 Protein kinase-like (PK-like)
684 553 132 2 SCOP 52058 L domain-like
650 537 121 10 SCOP 48371 ARM repeat
569 423 107 1 SCOP 54928 RNA-binding domain, RBD
558 520 109 3 SCOP 57850 RING/U-box
542 499 62 2 SCOP 46689 Homeodomain-like
503 405 92 2 SCOP 48452 TPR-like
482 451 90 8 SCOP 51735 NAD(P)-binding Rossmann-fold domains
383 375 50 7 SCOP 53474 alpha/beta-Hydrolases
367 351 75 1 SCOP 50978 WD40 repeat-like
325 318 24 4 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
322 305 28 1 SCOP 48264 Cytochrome P450
318 269 50 14 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
318 308 60 3 SCOP 53098 Ribonuclease H-like
313 268 58 3 SCOP 52833 Thioredoxin-like
306 259 81 0 SCOP 52047 RNI-like
292 284 59 0 SCOP 81383 F-box domain
290 276 65 7 SCOP 51445 (Trans)glycosidases
274 257 55 1 SCOP 47473 EF-hand
273 255 23 0 SCOP 103473 MFS general substrate transporter
272 145 34 3 SCOP 49503 Cupredoxins
262 236 23 1 SCOP 54171 DNA-binding domain
234 219 21 3 SCOP 51197 Clavaminate synthase-like
228 194 40 0 SCOP 57667 beta-beta-alpha zinc fingers
220 155 53 1 SCOP 49562 C2 domain (Calcium/lipid-binding domain, CaLB)
217 170 52 5 SCOP 51905 FAD/NAD(P)-binding domain
216 214 64 7 SCOP 56784 HAD-like
205 193 47 1 SCOP 48403 Ankyrin repeat
197 196 20 0 SCOP 47459 HLH, helix-loop-helix DNA-binding domain
190 143 77 5 SCOP 50249 Nucleic acid-binding proteins
183 175 35 5 SCOP 53448 Nucleotide-diphospho-sugar transferases
176 99 27 4 SCOP 53067 Actin-like ATPase domain
175 132 61 3 SCOP 54236 Ubiquitin-like
175 171 12 1 SCOP 101941 NAC domain
167 165 22 3 SCOP 51126 Pectin lyase-like
166 163 45 1 SCOP 46565 Chaperone J-domain
162 158 43 3 SCOP 46785 "Winged helix" DNA-binding domain
152 151 33 0 SCOP 54277 CAD & PB1 domains
150 115 30 1 SCOP 101936 DNA-binding pseudobarrel domain
147 72 32 1 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
143 142 36 6 SCOP 54001 Cysteine proteinases
138 127 22 5 SCOP 53383 PLP-dependent transferases
137 79 35 0 SCOP 90229 CCCH zinc finger
136 108 36 0 SCOP 57756 Retrovirus zinc finger-like domains
135 120 49 0 SCOP 57903 FYVE/PHD zinc finger
128 125 22 1 SCOP 81606 PP2C-like
128 58 33 0 SCOP 57889 Cysteine-rich domain
127 106 10 1 SCOP 118290 WRKY DNA-binding domain
125 70 12 2 SCOP 53901 Thiolase-like
123 108 23 1 SCOP 55961 Bet v1-like
123 80 25 0 SCOP 90123 ABC transporter transmembrane region
116 113 20 1 SCOP 103506 Mitochondrial carrier
111 109 13 1 SCOP 101148 Plant invertase/pectin methylesterase inhibitor
110 108 17 1 SCOP 48113 Heme-dependent peroxidases
109 87 20 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
108 106 27 3 SCOP 49899 Concanavalin A-like lectins/glucanases
106 99 15 1 SCOP 50630 Acid proteases
100 78 23 0 SCOP 55008 HMA, heavy metal-associated domain
100 64 17 1 SCOP 47954 Cyclin-like
99 92 28 0 SCOP 81901 HCP-like
99 59 33 1 SCOP 55021 ACT-like
96 94 28 0 SCOP 54695 POZ domain
95 94 13 2 SCOP 47113 Histone-fold
93 90 13 5 SCOP 51182 RmlC-like cupins
89 86 21 4 SCOP 56300 Metallo-dependent phosphatases
89 86 21 1 SCOP 47616 GST C-terminal domain-like
88 84 45 7 SCOP 54211 Ribosomal protein S5 domain 2-like
85 85 10 0 SCOP 55455 SRF-like
84 75 19 0 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
84 70 21 0 SCOP 51110 alpha-D-mannose-specific plant lectins
83 81 19 2 SCOP 54495 UBC-like
83 81 30 1 SCOP 81665 Calcium ATPase, transmembrane domain M
82 82 7 0 SCOP 57959 Leucine zipper domain
80 76 16 1 SCOP 52743 Subtilisin-like
80 77 23 1 SCOP 117281 Kelch motif
78 68 35 0 SCOP 46934 UBA-like
75 74 10 0 SCOP 47699 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
74 72 31 3 SCOP 81296 E set domains
74 54 24 3 SCOP 49785 Galactose-binding domain-like
73 72 10 1 SCOP 52266 SGNH hydrolase
71 64 19 1 SCOP 52172 CheY-like
69 69 14 1 SCOP 56801 Acetyl-CoA synthetase-like
69 52 17 3 SCOP 48239 Terpenoid cyclases/Protein prenyltransferases
68 54 14 1 SCOP 50129 GroES-like
68 64 31 2 SCOP 50447 Translation proteins
67 67 22 3 SCOP 52402 Adenine nucleotide alpha hydrolases-like
67 61 24 2 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
67 62 18 2 SCOP 56219 DNase I-like
67 66 33 3 SCOP 50729 PH domain-like
66 51 22 0 SCOP 54631 CBS-domain pair
65 65 16 4 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
65 63 38 3 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
65 64 14 1 SCOP 74788 Cullin repeat-like
64 34 17 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
64 64 26 1 SCOP 81653 Calcium ATPase, transduction domain A
63 62 26 2 SCOP 82199 SET domain
61 60 12 3 SCOP 49764 HSP20-like chaperones
61 41 11 0 SCOP 82153 FAS1 domain
60 43 23 0 SCOP 54768 dsRNA-binding domain-like
60 59 16 1 SCOP 47370 Bromodomain
59 58 9 2 SCOP 50685 Barwin-like endoglucanases
58 44 15 6 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
58 50 19 4 SCOP 52096 ClpP/crotonase
58 56 10 2 SCOP 48208 Six-hairpin glycosidases
57 56 20 2 SCOP 64356 SNARE-like
56 56 5 1 SCOP 81338 Aquaporin-like
55 53 6 0 SCOP 117856 AF0104/ALDC/Ptd012-like
54 51 12 3 SCOP 48576 Terpenoid synthases
54 53 32 1 SCOP 53300 vWA-like
52 48 23 3 SCOP 52374 Nucleotidylyl transferase
52 31 13 1 SCOP 47923 Ypt/Rab-GAP domain of gyp1p
52 43 23 1 SCOP 49599 TRAF domain-like
51 49 11 1 SCOP 50182 Sm-like ribonucleoproteins
50 50 34 2 SCOP 55681 Class II aaRS and biotin synthetases
50 43 17 0 SCOP 81324 Voltage-gated potassium channels
50 49 21 1 SCOP 52087 CRAL/TRIO domain
49 28 14 1 SCOP 55753 Actin depolymerizing proteins
49 28 16 1 SCOP 56024 Phospholipase D/nuclease
49 47 15 2 SCOP 56176 FAD-binding/transporter-associated domain-like
49 49 17 1 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
49 49 10 1 SCOP 48464 ENTH/VHS domain
48 48 23 3 SCOP 88697 PUA domain-like
47 44 14 1 SCOP 50891 Cyclophilin-like
47 25 19 1 SCOP 55785 PYP-like sensor domain (PAS domain)
47 45 14 4 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
45 38 18 4 SCOP 56059 Glutathione synthetase ATP-binding domain-like
45 43 12 1 SCOP 55811 Nudix
45 39 16 0 SCOP 58038 SNARE fusion complex
45 43 8 1 SCOP 51430 NAD(P)-linked oxidoreductase
45 45 17 0 SCOP 54427 NTF2-like
45 43 25 2 SCOP 81301 Nucleotidyltransferase
45 31 22 0 SCOP 90209 Ran binding protein zinc finger-like
43 43 12 1 SCOP 53850 Periplasmic binding protein-like II
43 41 9 2 SCOP 54518 Tubby C-terminal domain-like
43 17 9 1 SCOP 63411 LuxS/MPP-like metallohydrolase
43 42 12 1 SCOP 52490 Tubulin nucleotide-binding domain-like
42 38 13 2 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
41 38 17 1 SCOP 50104 Translation proteins SH3-like domain
41 40 15 7 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
41 40 18 1 SCOP 52799 (Phosphotyrosine protein) phosphatases II
41 41 9 1 SCOP 47661 t-snare proteins
40 40 17 1 SCOP 101447 Formin homology 2 domain (FH2 domain)
39 35 15 4 SCOP 51569 Aldolase
39 31 12 2 SCOP 51161 Trimeric LpxA-like enzymes
39 25 8 0 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
39 39 10 1 SCOP 55307 Tubulin C-terminal domain-like
38 29 17 2 SCOP 52317 Class I glutamine amidotransferase-like
38 37 8 2 SCOP 53720 ALDH-like
38 30 18 1 SCOP 54534 FKBP-like
38 36 20 0 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
38 34 11 3 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
38 37 18 1 SCOP 48592 GroEL equatorial domain-like
38 26 17 0 SCOP 52113 BRCT domain
38 38 6 1 SCOP 141562 At5g01610-like
37 36 19 4 SCOP 53187 Zn-dependent exopeptidases
37 34 17 0 SCOP 50985 RCC1/BLIP-II
37 37 13 3 SCOP 56672 DNA/RNA polymerases
37 37 17 3 SCOP 74650 Galactose mutarotase-like
37 35 20 1 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
37 36 13 0 SCOP 50965 Galactose oxidase, central domain
37 37 14 0 SCOP 46938 CRAL/TRIO N-terminal domain
35 30 12 2 SCOP 51695 PLC-like phosphodiesterases
35 35 15 1 SCOP 51206 cAMP-binding domain-like
34 31 9 3 SCOP 100950 NagB/RpiA/CoA transferase-like
34 27 16 1 SCOP 47592 SWIB/MDM2 domain
34 19 12 1 SCOP 54980 EF-G C-terminal domain-like
34 34 13 2 SCOP 52029 GroEL apical domain-like
33 29 10 1 SCOP 53271 PRTase-like
33 31 12 2 SCOP 56281 Metallo-hydrolase/oxidoreductase
33 31 18 3 SCOP 63380 Riboflavin synthase domain-like
33 33 13 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
33 24 17 0 SCOP 54160 Chromo domain-like
33 33 13 0 SCOP 63748 Tudor/PWWP/MBT
33 31 12 0 SCOP 54849 GroEL-intermediate domain like
32 32 6 1 SCOP 51395 FMN-linked oxidoreductases
32 31 11 1 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
30 30 6 3 SCOP 48150 DNA-glycosylase
30 29 12 1 SCOP 47095 HMG-box
30 19 9 0 SCOP 75471 YhbY-like
30 30 8 1 SCOP 49870 Osmotin, thaumatin-like protein
30 30 6 1 SCOP 103612 SBT domain
29 29 10 2 SCOP 53137 Translational machinery components
29 27 8 1 SCOP 56655 Carbohydrate phosphatase
28 25 5 2 SCOP 52151 FabD/lysophospholipase-like
28 27 6 0 SCOP 53822 Periplasmic binding protein-like I
28 28 8 0 SCOP 89009 GAT-like domain
27 27 5 1 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
27 26 12 2 SCOP 109604 HD-domain/PDEase-like
27 17 13 2 SCOP 55781 GAF domain-like
27 26 10 1 SCOP 56399 ADP-ribosylation
27 27 12 0 SCOP 81923 Double Clp-N motif
27 17 10 0 SCOP 82185 Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
27 26 11 0 SCOP 51011 Glycosyl hydrolase domain
27 25 13 4 SCOP 54373 FAD-linked reductases, C-terminal domain
26 25 9 2 SCOP 53254 Phosphoglycerate mutase-like
26 21 6 2 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
26 26 9 1 SCOP 48445 14-3-3 protein
26 25 12 1 SCOP 52025 PA domain
25 24 6 3 SCOP 53613 Ribokinase-like
25 23 8 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
25 25 10 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
25 25 15 1 SCOP 47576 Calponin-homology domain, CH-domain
25 25 9 1 SCOP 103511 Chlorophyll a-b binding protein
25 11 3 1 SCOP 55973 S-adenosylmethionine synthetase
25 25 8 1 SCOP 140990 FtsH protease domain-like
24 24 9 2 SCOP 55315 L30e-like
24 16 15 0 SCOP 69065 RNase III domain-like
24 24 11 3 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
24 22 9 1 SCOP 101690 PAZ domain
23 22 9 0 SCOP 111331 NAD kinase/diacylglycerol kinase-like
23 20 10 2 SCOP 55120 Pseudouridine synthase
23 22 10 1 SCOP 52777 CoA-dependent acyltransferases
23 23 7 0 SCOP 118310 AN1-like Zinc finger
22 21 15 1 SCOP 55920 Creatinase/aminopeptidase
22 20 12 2 SCOP 52218 Flavoproteins
22 18 7 2 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
22 20 10 2 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
22 18 10 1 SCOP 50494 Trypsin-like serine proteases
22 18 12 0 SCOP 50156 PDZ domain-like
22 20 7 0 SCOP 54106 LysM domain
22 22 9 1 SCOP 81631 PAP/OAS1 substrate-binding domain
21 19 11 0 SCOP 57997 Tropomyosin
21 20 8 0 SCOP 51306 LexA/Signal peptidase
21 19 4 0 SCOP 47090 PGBD-like
21 20 6 1 SCOP 49363 Purple acid phosphatase, N-terminal domain
21 20 3 1 SCOP 47874 Annexin
21 9 7 0 SCOP 47762 PAH2 domain
20 20 5 4 SCOP 51366 Ribulose-phoshate binding barrel
20 19 12 0 SCOP 103657 BAR/IMD domain-like
20 18 11 2 SCOP 53633 Carbamate kinase-like
20 19 7 1 SCOP 52821 Rhodanese/Cell cycle control phosphatase
20 20 6 0 SCOP 63829 Calcium-dependent phosphotriesterase
20 20 8 0 SCOP 144091 Rhomboid-like
20 18 5 1 SCOP 102405 MCP/YpsA-like
20 19 12 1 SCOP 51230 Single hybrid motif
20 19 5 1 SCOP 117070 LEA14-like
20 20 13 0 SCOP 47384 Homodimeric domain of signal transducing histidine kinase
20 19 6 0 SCOP 117892 Band 7/SPFH domain
20 9 7 1 SCOP 53738 Phosphoglucomutase, first 3 domains
20 19 9 1 SCOP 49723 Lipase/lipooxygenase domain (PLAT/LH2 domain)
20 20 6 1 SCOP 49590 PHL pollen allergen
19 18 12 3 SCOP 51556 Metallo-dependent hydrolases
19 18 6 0 SCOP 57829 Zn-binding ribosomal proteins
19 17 6 1 SCOP 75304 Amidase signature (AS) enzymes
19 17 6 2 SCOP 47240 Ferritin-like
19 19 8 1 SCOP 56104 SAICAR synthase-like
19 18 9 0 SCOP 161111 Cation efflux protein transmembrane domain-like
19 19 11 0 SCOP 82171 DPP6 N-terminal domain-like
19 19 5 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
19 9 6 0 SCOP 50199 Staphylococcal nuclease
19 19 8 1 SCOP 48019 post-AAA+ oligomerization domain-like
19 19 5 1 SCOP 52279 Beta-D-glucan exohydrolase, C-terminal domain
19 19 7 0 SCOP 49354 PapD-like
19 18 8 1 SCOP 49447 Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
18 17 8 1 SCOP 102114 Radical SAM enzymes
18 16 12 1 SCOP 52954 Class II aaRS ABD-related
18 18 10 1 SCOP 50022 ISP domain
18 15 6 1 SCOP 53955 Lysozyme-like
18 18 6 0 SCOP 50800 PK beta-barrel domain-like
18 18 11 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
18 17 14 1 SCOP 56204 Hect, E3 ligase catalytic domain
18 17 6 1 SCOP 75632 Cullin homology domain
18 18 10 0 SCOP 63491 BAG domain
18 9 6 1 SCOP 54416 Amine oxidase N-terminal region
18 18 11 0 SCOP 55277 GYF domain
17 17 5 1 SCOP 53784 Phosphofructokinase
17 16 4 1 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
17 17 5 1 SCOP 55724 Mog1p/PsbP-like
17 17 9 1 SCOP 49879 SMAD/FHA domain
17 16 8 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
17 17 11 0 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
17 17 6 0 SCOP 160443 SMR domain-like
17 17 7 0 SCOP 57863 ArfGap/RecO-like zinc finger
17 17 4 1 SCOP 56327 LDH C-terminal domain-like
17 14 9 0 SCOP 51045 WW domain
16 16 5 1 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
16 15 8 2 SCOP 48557 L-aspartase-like
16 16 8 1 SCOP 54292 2Fe-2S ferredoxin-like
16 9 5 2 SCOP 51726 UROD/MetE-like
16 16 6 1 SCOP 55856 Cytochrome b5-like heme/steroid binding domain
16 14 5 1 SCOP 111352 Ammonium transporter
16 14 5 1 SCOP 55895 Ribonuclease Rh-like
16 13 8 1 SCOP 55979 DNA clamp
16 16 6 1 SCOP 55103 FAD-linked oxidases, C-terminal domain
16 16 9 1 SCOP 55060 GHMP Kinase, C-terminal domain
16 16 9 0 SCOP 46774 ARID-like
16 16 5 0 SCOP 47676 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
16 13 5 0 SCOP 109905 Surp module (SWAP domain)
16 16 8 0 SCOP 110942 HSP90 C-terminal domain
15 15 7 1 SCOP 56634 Heme-dependent catalase-like
15 14 8 1 SCOP 88723 PIN domain-like
15 15 7 0 SCOP 53649 Alkaline phosphatase-like
15 14 5 1 SCOP 55770 Profilin (actin-binding protein)
15 15 3 0 SCOP 52091 SpoIIaa-like
15 15 5 0 SCOP 52935 PK C-terminal domain-like
15 3 2 0 SCOP 81698 FF domain
14 14 6 1 SCOP 55174 Alpha-L RNA-binding motif
14 10 8 1 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
14 14 3 0 SCOP 47769 SAM/Pointed domain
14 12 7 1 SCOP 47862 Saposin
13 12 8 2 SCOP 53927 Cytidine deaminase-like
13 11 5 1 SCOP 56808 Ribosomal protein L1
13 13 4 0 SCOP 52080 Ribosomal proteins L15p and L18e
13 13 6 0 SCOP 47336 ACP-like
13 10 6 0 SCOP 81333 F1F0 ATP synthase subunit C
13 13 1 1 SCOP 56276 S-adenosylmethionine decarboxylase
13 13 8 0 SCOP 47027 Acyl-CoA binding protein
13 13 3 0 SCOP 64268 PX domain
13 8 4 2 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
13 13 10 1 SCOP 52016 LeuD/IlvD-like
13 13 6 3 SCOP 52467 DHS-like NAD/FAD-binding domain
13 10 7 1 SCOP 53732 Aconitase iron-sulfur domain
13 13 8 1 SCOP 52425 Cryptochrome/photolyase, N-terminal domain
13 8 6 2 SCOP 47203 Acyl-CoA dehydrogenase C-terminal domain-like
13 13 6 0 SCOP 52200 Toll/Interleukin receptor TIR domain
13 13 13 0 SCOP 81995 beta-sandwich domain of Sec23/24
13 10 10 1 SCOP 52440 PreATP-grasp domain
13 13 7 1 SCOP 52210 Succinyl-CoA synthetase domains
13 11 8 1 SCOP 49998 Amine oxidase catalytic domain
13 7 5 1 SCOP 55945 TATA-box binding protein-like
13 13 6 0 SCOP 158639 ENT-like
13 13 9 0 SCOP 159042 Plus3-like
12 11 10 1 SCOP 52949 Macro domain-like
12 12 2 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
12 12 2 1 SCOP 49777 PEBP-like
12 12 5 1 SCOP 48484 Lipoxigenase
12 12 8 0 SCOP 57783 Zinc beta-ribbon
12 7 4 0 SCOP 88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors
12 12 7 0 SCOP 69322 Tricorn protease domain 2
12 10 5 0 SCOP 50814 Lipocalins
12 10 7 1 SCOP 48225 Seven-hairpin glycosidases
12 11 7 0 SCOP 68906 SAP domain
12 12 3 1 SCOP 55031 Bacterial exopeptidase dimerisation domain
12 12 6 0 SCOP 101576 Supernatant protein factor (SPF), C-terminal domain
12 12 4 0 SCOP 48350 GTPase activation domain, GAP
12 11 6 0 SCOP 55666 Ribonuclease PH domain 2-like
12 12 7 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
12 12 8 0 SCOP 140996 Hermes dimerisation domain
12 11 3 0 SCOP 140383 BSD domain-like
12 12 5 1 SCOP 54585 Cdc48 domain 2-like
11 10 6 2 SCOP 55821 YrdC/RibB
11 10 6 1 SCOP 55205 EPT/RTPC-like
11 9 6 1 SCOP 48256 Citrate synthase
11 11 3 0 SCOP 46579 Prefoldin
11 11 5 0 SCOP 144000 Oxysterol-binding protein-like
11 11 6 1 SCOP 56317 Carbon-nitrogen hydrolase
11 11 7 1 SCOP 55159 eIF1-like
11 11 2 1 SCOP 55797 PR-1-like
11 11 5 1 SCOP 81340 Clc chloride channel
11 11 6 1 SCOP 48173 Cryptochrome/photolyase FAD-binding domain
11 10 6 1 SCOP 54403 Cystatin/monellin
11 11 6 2 SCOP 52922 TK C-terminal domain-like
11 6 4 1 SCOP 56053 Ribosomal protein L6
11 11 11 1 SCOP 82754 C-terminal, gelsolin-like domain of Sec23/24
11 11 5 0 SCOP 109715 DEK C-terminal domain
11 11 6 1 SCOP 63887 P-domain of calnexin/calreticulin
11 11 11 1 SCOP 81811 Helical domain of Sec23/24
10 10 5 1 SCOP 56047 Ribosomal protein S8
10 10 3 1 SCOP 51316 Mss4-like
10 10 3 1 SCOP 47226 Histidine-containing phosphotransfer domain, HPT domain
10 10 3 1 SCOP 56815 Sec1/munc18-like (SM) proteins
10 10 5 2 SCOP 52768 Arginase/deacetylase
10 8 7 2 SCOP 55931 Glutamine synthetase/guanido kinase
10 10 2 0 SCOP 54736 ClpS-like
10 10 6 1 SCOP 75005 Arabinanase/levansucrase/invertase
10 10 5 1 SCOP 89124 Nop domain
10 10 4 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
10 5 1 0 SCOP 53681 Aspartate/glutamate racemase
10 10 3 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
10 10 7 0 SCOP 144232 HIT/MYND zinc finger-like
10 10 8 1 SCOP 81271 TGS-like
9 8 4 2 SCOP 53697 SIS domain
9 9 4 1 SCOP 50193 Ribosomal protein L14
9 9 2 1 SCOP 103491 Preprotein translocase SecY subunit
9 7 3 1 SCOP 75620 Release factor
9 9 3 1 SCOP 50324 Inorganic pyrophosphatase
9 9 6 0 SCOP 47060 S15/NS1 RNA-binding domain
9 9 8 1 SCOP 50475 FMN-binding split barrel
9 8 4 1 SCOP 48613 Heme oxygenase-like
9 9 6 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
9 9 5 1 SCOP 143113 NAP-like
9 8 7 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
9 7 6 0 SCOP 47781 RuvA domain 2-like
9 9 7 0 SCOP 49452 Starch-binding domain-like
9 9 8 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
9 9 5 1 SCOP 82704 AlbA-like
9 8 5 0 SCOP 50405 Actin-crosslinking proteins
9 9 4 0 SCOP 144083 Magnesium transport protein CorA, transmembrane region
9 7 4 1 SCOP 158702 Sec63 N-terminal domain-like
9 9 6 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
9 9 5 1 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
9 9 5 0 SCOP 110004 Glycolipid transfer protein, GLTP
9 9 8 1 SCOP 48425 Sec7 domain
9 9 2 0 SCOP 54529 Mitochondrial glycoprotein MAM33-like
9 9 3 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
9 9 3 0 SCOP 140111 Endosomal sorting complex assembly domain
9 7 7 0 SCOP 57933 TAZ domain
8 8 7 0 SCOP 110324 Ribosomal L27 protein-like
8 8 7 1 SCOP 75217 alpha/beta knot
8 7 6 1 SCOP 51351 Triosephosphate isomerase (TIM)
8 8 6 1 SCOP 54862 4Fe-4S ferredoxins
8 7 5 1 SCOP 50715 Ribosomal protein L25-like
8 8 4 2 SCOP 51419 PLP-binding barrel
8 7 4 1 SCOP 56322 ADC synthase
8 7 4 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
8 7 5 1 SCOP 48439 Protein prenylyltransferase
8 8 5 0 SCOP 50044 SH3-domain
8 7 3 1 SCOP 51069 Carbonic anhydrase
8 8 2 0 SCOP 102712 JAB1/MPN domain
8 6 3 1 SCOP 54909 Dimeric alpha+beta barrel
8 8 2 1 SCOP 50692 ADC-like
8 8 5 0 SCOP 55154 CYTH-like phosphatases
8 6 6 1 SCOP 103025 Folate-binding domain
8 8 4 1 SCOP 54626 Chalcone isomerase
8 7 2 1 SCOP 56574 Serpins
8 8 7 0 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
8 7 7 2 SCOP 51246 Rudiment single hybrid motif
8 8 4 0 SCOP 50370 Ricin B-like lectins
8 8 6 0 SCOP 101898 NHL repeat
8 5 4 1 SCOP 56014 Nitrite and sulphite reductase 4Fe-4S domain-like
8 8 5 0 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
8 5 4 1 SCOP 51101 Mannose-binding lectins
8 8 4 1 SCOP 49348 Clathrin adaptor appendage domain
8 8 4 1 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
8 4 1 0 SCOP 55394 Bactericidal permeability-increasing protein, BPI
8 8 2 0 SCOP 63570 PABC (PABP) domain
8 6 5 0 SCOP 143791 DUSP-like
8 8 2 0 SCOP 57016 Plant lectins/antimicrobial peptides
8 4 4 1 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
8 8 5 0 SCOP 46942 Elongation factor TFIIS domain 2
8 8 6 0 SCOP 55003 PAP/Archaeal CCA-adding enzyme, C-terminal domain
8 8 1 1 SCOP 116768 DNA-binding domain of EIN3-like
8 8 8 0 SCOP 82919 Zn-finger domain of Sec23/24
7 7 3 0 SCOP 53167 Purine and uridine phosphorylases
7 7 5 2 SCOP 54197 HIT-like
7 7 5 0 SCOP 46946 S13-like H2TH domain
7 7 3 1 SCOP 53748 Phosphoglycerate kinase
7 7 6 1 SCOP 82649 SufE/NifU
7 7 5 1 SCOP 55068 Peptide methionine sulfoxide reductase
7 7 7 0 SCOP 101908 Putative isomerase YbhE
7 5 3 1 SCOP 53590 Nucleoside hydrolase
7 7 2 0 SCOP 54648 DLC
7 7 5 2 SCOP 46626 Cytochrome c
7 4 4 1 SCOP 54506 Diaminopimelate epimerase-like
7 6 5 0 SCOP 56019 The spindle assembly checkpoint protein mad2
7 7 6 0 SCOP 47819 HRDC-like
7 6 5 1 SCOP 53056 beta-carbonic anhydrase, cab
7 7 3 0 SCOP 58113 Apolipoprotein A-I
7 7 3 1 SCOP 81483 Bacterial photosystem II reaction centre, L and M subunits
7 7 4 1 SCOP 53795 PEP carboxykinase-like
7 7 5 1 SCOP 56645 Acyl-CoA dehydrogenase NM domain-like
7 7 6 1 SCOP 56719 Type II DNA topoisomerase
7 6 5 0 SCOP 158745 LanC-like
7 7 3 0 SCOP 49265 Fibronectin type III
7 7 7 0 SCOP 48334 DNA repair protein MutS, domain III
7 7 3 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
7 7 7 1 SCOP 53623 MurD-like peptide ligases, catalytic domain
7 7 5 0 SCOP 143548 Serine metabolism enzymes domain
7 7 3 0 SCOP 100966 Translation initiation factor 2 beta, aIF2beta, N-terminal domain
7 7 3 1 SCOP 56542 Substrate-binding domain of HMG-CoA reductase
7 7 5 0 SCOP 82708 R3H domain
7 7 4 1 SCOP 81822 RuBisCo LSMT C-terminal, substrate-binding domain
7 7 4 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
7 7 4 0 SCOP 55711 Subdomain of clathrin and coatomer appendage domain
7 7 3 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
7 7 5 0 SCOP 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
7 7 3 1 SCOP 55035 NAD-binding domain of HMG-CoA reductase
7 7 5 0 SCOP 101238 XPC-binding domain
6 6 3 1 SCOP 47973 Ribosomal protein S7
6 6 5 1 SCOP 54999 Ribosomal protein S10
6 6 4 0 SCOP 54843 Ribosomal protein L22
6 6 4 0 SCOP 52980 Restriction endonuclease-like
6 6 3 1 SCOP 52161 Ribosomal protein L13
6 5 4 1 SCOP 55194 Ribosome recycling factor, RRF
6 6 4 1 SCOP 51730 FAD-linked oxidoreductase
6 6 2 0 SCOP 55129 Ribosomal protein L30p/L7e
6 6 2 1 SCOP 57798 Casein kinase II beta subunit
6 6 5 1 SCOP 55144 LigT-like
6 6 5 0 SCOP 161219 CHY zinc finger-like
6 6 2 0 SCOP 47072 Cysteine alpha-hairpin motif
6 6 3 1 SCOP 55418 eIF4e-like
6 6 1 2 SCOP 55909 Pentein
6 6 3 1 SCOP 88946 Sigma2 domain of RNA polymerase sigma factors
6 6 4 1 SCOP 56524 Oxidoreductase molybdopterin-binding domain
6 6 3 1 SCOP 101112 Oxygen-evolving enhancer protein 3,
6 3 3 1 SCOP 53218 Molybdenum cofactor biosynthesis proteins
6 5 4 1 SCOP 51338 Composite domain of metallo-dependent hydrolases
6 6 2 0 SCOP 101386 all-alpha NTP pyrophosphatases
6 6 3 0 SCOP 57802 Rubredoxin-like
6 6 2 0 SCOP 53182 Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
6 6 5 0 SCOP 55136 Probable bacterial effector-binding domain
6 6 6 1 SCOP 55186 ThrRS/AlaRS common domain
6 6 5 1 SCOP 46548 alpha-helical ferredoxin
6 3 1 0 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
6 6 4 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
6 6 3 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
6 6 3 0 SCOP 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
6 3 2 1 SCOP 55124 Nitrite/Sulfite reductase N-terminal domain-like
6 6 3 0 SCOP 47895 Transducin (alpha subunit), insertion domain
6 3 3 0 SCOP 49303 beta-Galactosidase/glucuronidase domain
6 6 4 0 SCOP 144074 E2F-DP heterodimerization region
6 6 3 0 SCOP 48340 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
6 6 5 0 SCOP 47050 VHP, Villin headpiece domain
6 6 3 0 SCOP 57277 Granulin repeat
6 5 4 1 SCOP 64158 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
6 5 4 1 SCOP 117018 ATP-dependent DNA ligase DNA-binding domain
6 6 2 0 SCOP 54556 Chitinase insertion domain
6 6 5 1 SCOP 81382 Skp1 dimerisation domain-like
5 5 2 1 SCOP 52166 Ribosomal protein L4
5 5 2 0 SCOP 54570 Ribosomal protein S19
5 5 2 1 SCOP 55831 Thymidylate synthase/dCMP hydroxymethylase
5 5 3 0 SCOP 160369 Ribosomal protein L10-like
5 5 3 0 SCOP 82657 BolA-like
5 5 3 0 SCOP 46561 Ribosomal protein L29 (L29p)
5 5 4 0 SCOP 54995 Ribosomal protein S6
5 5 2 0 SCOP 103456 Preprotein translocase SecE subunit
5 5 3 0 SCOP 52499 Isochorismatase-like hydrolases
5 4 4 2 SCOP 90096 Subunits of heterodimeric actin filament capping protein Capz
5 5 4 1 SCOP 49329 Cu,Zn superoxide dismutase-like
5 5 4 1 SCOP 82282 Homocysteine S-methyltransferase
5 5 2 1 SCOP 88713 Glycoside hydrolase/deacetylase
5 5 5 0 SCOP 55257 RBP11-like subunits of RNA polymerase
5 5 4 1 SCOP 56529 FAH
5 5 5 1 SCOP 53800 Chelatase
5 5 2 1 SCOP 46458 Globin-like
5 5 2 1 SCOP 161077 Photosystem II antenna protein-like
5 5 5 1 SCOP 54447 ssDNA-binding transcriptional regulator domain
5 5 4 1 SCOP 51391 Thiamin phosphate synthase
5 5 5 1 SCOP 48600 Chorismate mutase II
5 5 4 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
5 4 2 1 SCOP 51219 TRAP-like
5 5 5 1 SCOP 51604 Enolase C-terminal domain-like
5 4 3 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
5 5 3 0 SCOP 54654 CI-2 family of serine protease inhibitors
5 5 4 0 SCOP 142921 WGR domain-like
5 5 2 0 SCOP 52129 Caspase-like
5 5 3 0 SCOP 90257 Myosin rod fragments
5 4 3 1 SCOP 68923 PEP carboxykinase N-terminal domain
5 5 2 1 SCOP 52418 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
5 4 2 1 SCOP 48056 Di-copper centre-containing domain
5 5 5 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
5 5 2 0 SCOP 69075 Glutamyl tRNA-reductase dimerization domain
5 5 2 0 SCOP 75689 Zinc-binding domain of translation initiation factor 2 beta
5 5 2 0 SCOP 55545 beta-N-acetylhexosaminidase-like domain
5 5 4 1 SCOP 55957 Phosphoglucomutase, C-terminal domain
5 3 3 1 SCOP 143975 IlvD/EDD N-terminal domain-like
5 5 4 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
5 5 2 0 SCOP 57845 B-box zinc-binding domain
5 5 2 1 SCOP 101152 Mob1/phocein
5 5 3 0 SCOP 47396 Transcription factor IIA (TFIIA), alpha-helical domain
5 5 2 0 SCOP 118359 Expressed protein At2g23090/F21P24.15
5 5 4 0 SCOP 158573 GINS helical bundle-like
5 5 3 0 SCOP 57196 EGF/Laminin
5 4 3 0 SCOP 88798 N-terminal, heterodimerisation domain of RBP7 (RpoE)
5 5 2 0 SCOP 88688 Families 57/38 glycoside transferase middle domain
5 4 4 0 SCOP 54368 Glutamine synthetase, N-terminal domain
5 4 3 1 SCOP 89942 eEF1-gamma domain
5 5 4 0 SCOP 103243 KA1-like
5 5 5 0 SCOP 143503 PUG domain-like
5 5 4 0 SCOP 47587 Domain of poly(ADP-ribose) polymerase
4 4 4 1 SCOP 53790 Tetrapyrrole methylase
4 4 3 2 SCOP 54686 Ribosomal protein L16p/L10e
4 4 2 1 SCOP 55282 RL5-like
4 2 2 0 SCOP 56214 4'-phosphopantetheinyl transferase
4 4 3 1 SCOP 53597 Dihydrofolate reductase-like
4 4 3 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
4 4 3 0 SCOP 89360 HesB-like domain
4 4 3 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
4 4 3 1 SCOP 64005 Undecaprenyl diphosphate synthase
4 4 2 1 SCOP 142695 RibA-like
4 4 2 0 SCOP 52042 Ribosomal protein L32e
4 4 2 0 SCOP 144122 Tim10-like
4 4 2 0 SCOP 54575 Ribosomal protein L31e
4 4 3 1 SCOP 53328 Formyltransferase
4 4 1 0 SCOP 81524 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
4 4 3 0 SCOP 54897 Protease propeptides/inhibitors
4 4 2 1 SCOP 118203 Vacuolar ATP synthase subunit C
4 4 2 1 SCOP 101960 Stabilizer of iron transporter SufD
4 4 3 0 SCOP 141571 Pentapeptide repeat-like
4 2 2 0 SCOP 46955 Putative DNA-binding domain
4 3 2 1 SCOP 56349 DNA breaking-rejoining enzymes
4 4 2 0 SCOP 110857 Gamma-glutamyl cyclotransferase-like
4 4 2 1 SCOP 50993 Peptidase/esterase 'gauge' domain
4 4 4 1 SCOP 52335 Methylglyoxal synthase-like
4 4 3 0 SCOP 75011 3-carboxy-cis,cis-mucoante lactonizing enzyme
4 4 1 1 SCOP 89562 RraA-like
4 4 4 1 SCOP 54984 eEF-1beta-like
4 4 2 0 SCOP 116820 Rps17e-like
4 4 4 0 SCOP 53092 Creatinase/prolidase N-terminal domain
4 4 4 0 SCOP 46589 tRNA-binding arm
4 2 2 0 SCOP 89372 Fucose-specific lectin
4 4 1 1 SCOP 110019 ERO1-like
4 4 4 1 SCOP 54826 Enolase N-terminal domain-like
4 4 2 0 SCOP 52075 Outer arm dynein light chain 1
4 3 3 0 SCOP 81891 Poly A polymerase C-terminal region-like
4 3 2 1 SCOP 56042 PurM C-terminal domain-like
4 4 2 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
4 4 2 0 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
4 3 2 1 SCOP 55326 PurM N-terminal domain-like
4 3 3 0 SCOP 55116 Formiminotransferase domain of formiminotransferase-cyclodeaminase.
4 4 3 0 SCOP 47933 ERP29 C domain-like
4 4 3 0 SCOP 54752 RecA protein, C-terminal domain
4 4 2 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
4 4 3 0 SCOP 69000 FAD-dependent thiol oxidase
4 4 3 0 SCOP 116846 MIT domain
4 4 2 1 SCOP 55481 N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
4 4 4 0 SCOP 47672 Transferrin receptor-like dimerisation domain
4 4 2 1 SCOP 101233 PWI domain
4 4 2 0 SCOP 57095 Scorpion toxin-like
4 4 4 0 SCOP 111388 Pollen allergen ole e 6
4 4 1 0 SCOP 69742 Glutamyl tRNA-reductase catalytic, N-terminal domain
4 4 4 0 SCOP 75553 Smc hinge domain
4 4 2 0 SCOP 160527 V-type ATPase subunit E-like
4 4 2 1 SCOP 82215 C-terminal autoproteolytic domain of nucleoporin nup98
4 4 2 0 SCOP 50784 Transcription factor IIA (TFIIA), beta-barrel domain
4 4 4 1 SCOP 50989 Clathrin heavy-chain terminal domain
4 4 1 1 SCOP 140427 VPS28 C-terminal domain-like
4 4 3 0 SCOP 159065 Dom34/Pelota N-terminal domain-like
4 4 3 0 SCOP 69340 C-terminal domain of adenylylcyclase associated protein
4 4 4 0 SCOP 160219 AMPKBI-like
4 4 1 0 SCOP 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain
4 4 3 0 SCOP 81496 Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
4 4 3 0 SCOP 81502 ISP transmembrane anchor
4 3 3 1 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
3 3 3 0 SCOP 48013 NusB-like
3 3 1 1 SCOP 56420 Peptide deformylase
3 3 2 0 SCOP 141091 L21p-like
3 2 2 1 SCOP 103263 Chorismate synthase, AroC
3 3 1 1 SCOP 51283 dUTPase-like
3 3 3 1 SCOP 51713 tRNA-guanine transglycosylase
3 3 1 0 SCOP 56770 HydA/Nqo6-like
3 3 2 1 SCOP 52313 Ribosomal protein S2
3 2 2 1 SCOP 55298 YjgF-like
3 3 2 1 SCOP 56796 Dehydroquinate synthase-like
3 3 2 0 SCOP 48140 Ribosomal protein L19 (L19e)
3 3 2 0 SCOP 140718 Mediator hinge subcomplex-like
3 3 1 0 SCOP 53639 AraD/HMP-PK domain-like
3 3 3 1 SCOP 111126 Ligand-binding domain in the NO signalling and Golgi transport
3 3 2 0 SCOP 103486 V-type ATP synthase subunit C
3 3 1 0 SCOP 53032 tRNA-intron endonuclease catalytic domain-like
3 3 2 0 SCOP 103111 Activator of Hsp90 ATPase, Aha1
3 3 2 0 SCOP 143447 AMMECR1-like
3 3 2 0 SCOP 57662 Ferredoxin thioredoxin reductase (FTR), catalytic beta chain
3 3 2 1 SCOP 64234 Photosystem I subunit PsaD
3 3 1 0 SCOP 50090 Electron transport accessory proteins
3 3 2 1 SCOP 55239 RuBisCO, small subunit
3 2 2 1 SCOP 101546 ASF1-like
3 3 3 0 SCOP 55331 Tautomerase/MIF
3 2 2 1 SCOP 56266 DmpA/ArgJ-like
3 3 3 0 SCOP 103256 Hypothetical protein TM0160
3 3 1 0 SCOP 89550 PHP domain-like
3 3 3 0 SCOP 56762 HydB/Nqo4-like
3 3 2 0 SCOP 50952 Soluble quinoprotein glucose dehydrogenase
3 3 2 0 SCOP 143456 VC0467-like
3 3 2 0 SCOP 55826 YbaK/ProRS associated domain
3 3 3 1 SCOP 110069 ApaG-like
3 3 1 1 SCOP 56925 OMPA-like
3 3 2 1 SCOP 56726 DNA topoisomerase IV, alpha subunit
3 3 1 1 SCOP 55287 RPB5-like RNA polymerase subunit
3 3 1 0 SCOP 143437 THUMP domain-like
3 3 2 1 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
3 3 3 1 SCOP 56003 Molybdenum cofactor-binding domain
3 3 3 1 SCOP 69336 Alpha subunit of glutamate synthase, C-terminal domain
3 3 3 0 SCOP 53706 Formate dehydrogenase/DMSO reductase, domains 1-3
3 3 2 0 SCOP 50960 TolB, C-terminal domain
3 3 1 1 SCOP 82114 Riboflavin kinase-like
3 3 3 0 SCOP 69304 Tricorn protease N-terminal domain
3 3 1 0 SCOP 48537 Phospholipase C/P1 nuclease
3 3 3 0 SCOP 54821 Ribosomal protein S3 C-terminal domain
3 3 3 1 SCOP 52009 Phosphohistidine domain
3 3 2 0 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
3 2 2 0 SCOP 51971 Nucleotide-binding domain
3 3 3 0 SCOP 55658 L9 N-domain-like
3 3 1 0 SCOP 144206 NOB1 zinc finger-like
3 3 3 0 SCOP 63999 Thiamin pyrophosphokinase, catalytic domain
3 3 2 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
3 3 3 0 SCOP 142984 Nqo1 middle domain-like
3 3 2 1 SCOP 50621 Alanine racemase C-terminal domain-like
3 3 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
3 3 3 0 SCOP 90002 Hypothetical protein YjiA, C-terminal domain
3 3 1 0 SCOP 47648 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
3 3 3 0 SCOP 117289 Nucleoporin domain
3 3 1 1 SCOP 55637 Cell cycle regulatory proteins
3 3 3 0 SCOP 140490 Nqo1C-terminal domain-like
3 3 3 1 SCOP 81837 BEACH domain
3 3 3 0 SCOP 55271 DNA repair protein MutS, domain I
3 3 3 1 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
3 3 2 1 SCOP 109993 VPS9 domain
3 3 2 0 SCOP 161065 ATP synthase D chain-like
3 3 3 1 SCOP 142019 Nqo1 FMN-binding domain-like
3 2 2 1 SCOP 51649 RuBisCo, C-terminal domain
3 3 3 1 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
3 3 2 0 SCOP 102848 NSFL1 (p97 ATPase) cofactor p47, SEP domain
3 3 1 0 SCOP 53036 Eukaryotic RPB5 N-terminal domain
3 3 3 1 SCOP 81886 Helical scaffold and wing domains of SecA
3 3 2 1 SCOP 56741 Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
3 3 2 0 SCOP 161245 Zinc hairpin stack
3 3 3 0 SCOP 140612 EB1 dimerisation domain-like
3 2 2 0 SCOP 116878 TrmE connector domain
3 3 3 0 SCOP 64586 C-terminal domain of ProRS
3 3 3 0 SCOP 101790 Aminomethyltransferase beta-barrel domain
3 3 2 0 SCOP 101821 Aminopeptidase/glucanase lid domain
3 3 3 0 SCOP 53150 DNA repair protein MutS, domain II
3 3 2 0 SCOP 57770 Methionyl-tRNA synthetase (MetRS), Zn-domain
3 3 2 0 SCOP 158230 PRP4-like
2 2 1 0 SCOP 46911 Ribosomal protein S18
2 2 2 0 SCOP 89919 Ribosome-binding factor A, RbfA
2 2 1 0 SCOP 57840 Ribosomal protein L36
2 2 2 0 SCOP 64182 DHH phosphoesterases
2 2 2 0 SCOP 143034 L35p-like
2 2 2 0 SCOP 143800 L28p-like
2 2 2 0 SCOP 46992 Ribosomal protein S20
2 2 1 0 SCOP 54565 Ribosomal protein S16
2 2 1 1 SCOP 69765 IpsF-like
2 2 2 1 SCOP 52121 Lumazine synthase
2 2 1 0 SCOP 55387 Frataxin/Nqo15-like
2 2 2 0 SCOP 144217 CSL zinc finger
2 1 1 0 SCOP 55469 FMN-dependent nitroreductase-like
2 2 1 0 SCOP 141678 MAL13P1.257-like
2 2 1 0 SCOP 110296 Oligoxyloglucan reducing end-specific cellobiohydrolase
2 2 2 1 SCOP 69500 DTD-like
2 1 1 1 SCOP 102886 Coproporphyrinogen III oxidase
2 2 1 0 SCOP 81514 Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
2 2 2 0 SCOP 55248 PCD-like
2 2 1 0 SCOP 89895 FYSH domain
2 2 1 0 SCOP 51645 Malate synthase G
2 2 2 0 SCOP 52972 ITPase-like
2 2 1 0 SCOP 140959 Indolic compounds 2,3-dioxygenase-like
2 2 2 0 SCOP 47694 Cytochrome c oxidase subunit h
2 2 2 1 SCOP 69060 Arp2/3 complex 21 kDa subunit ARPC3
2 2 2 1 SCOP 64153 YjeF N-terminal domain-like
2 2 1 0 SCOP 46988 Tubulin chaperone cofactor A
2 2 2 0 SCOP 69618 HemD-like
2 2 2 1 SCOP 52788 Phosphotyrosine protein phosphatases I
2 1 1 1 SCOP 81558 Photosystem I subunits PsaA/PsaB
2 2 1 0 SCOP 81563 Photosystem I reaction center subunit X, PsaK
2 2 2 1 SCOP 81568 Photosystem I reaction center subunit XI, PsaL
2 2 1 1 SCOP 161045 Cytochrome b559 subunits
2 1 1 0 SCOP 49478 Cna protein B-type domain
2 2 1 0 SCOP 161084 MAPEG domain-like
2 2 2 1 SCOP 55040 Molybdenum cofactor biosynthesis protein C, MoaC
2 2 1 1 SCOP 51998 PFL-like glycyl radical enzymes
2 2 2 0 SCOP 55718 SCP-like
2 2 2 0 SCOP 47413 lambda repressor-like DNA-binding domains
2 2 2 0 SCOP 142754 NadA-like
2 2 2 0 SCOP 82771 GIY-YIG endonuclease
2 2 1 0 SCOP 158615 RbcX-like
2 2 2 0 SCOP 101744 Rof/RNase P subunit-like
2 2 2 0 SCOP 103441 PetM subunit of the cytochrome b6f complex
2 2 2 0 SCOP 64167 SurE-like
2 2 2 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
2 2 1 0 SCOP 54913 GlnB-like
2 2 2 0 SCOP 159501 EreA/ChaN-like
2 2 2 1 SCOP 53213 LigB-like
2 2 2 0 SCOP 51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
2 2 2 0 SCOP 56747 Prim-pol domain
2 2 2 0 SCOP 141130 Acetamidase/Formamidase-like
2 2 2 0 SCOP 69786 YggU-like
2 2 2 0 SCOP 64076 MTH938-like
2 2 2 0 SCOP 69754 Ribosome binding protein Y (YfiA homologue)
2 2 2 0 SCOP 158710 PSPTO4464-like
2 1 1 0 SCOP 102198 Putative cyclase
2 2 1 0 SCOP 46950 Double-stranded DNA-binding domain
2 2 2 1 SCOP 74784 Translin
2 2 2 1 SCOP 111321 AF1104-like
2 2 1 1 SCOP 142535 AF0625-like
2 2 1 0 SCOP 160374 RplX-like
2 2 2 0 SCOP 102462 Peptidyl-tRNA hydrolase II
2 2 2 0 SCOP 143865 CorA soluble domain-like
2 2 2 0 SCOP 158832 Tex N-terminal region-like
2 2 1 0 SCOP 82093 Heme chaperone CcmE
2 2 2 0 SCOP 69318 Integrin alpha N-terminal domain
2 2 2 0 SCOP 48619 Phospholipase A2, PLA2
2 2 2 0 SCOP 55608 Homing endonucleases
2 2 2 0 SCOP 63825 YWTD domain
2 2 2 0 SCOP 49344 CBD9-like
2 2 2 0 SCOP 118116 DNA mismatch repair protein MutL
2 1 1 0 SCOP 49464 Carboxypeptidase regulatory domain-like
2 2 1 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
2 2 1 0 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
2 2 2 0 SCOP 54665 CO dehydrogenase molybdoprotein N-domain-like
2 2 1 1 SCOP 53920 Fe-only hydrogenase
2 1 1 0 SCOP 101904 GyrA/ParC C-terminal domain-like
2 2 2 1 SCOP 55447 CO dehydrogenase flavoprotein C-terminal domain-like
2 2 2 0 SCOP 110836 Hypothetical protein SAV1430
2 2 2 0 SCOP 63418 MurE/MurF N-terminal domain
2 2 2 0 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
2 2 2 0 SCOP 101278 N-terminal domain of adenylylcyclase associated protein, CAP
2 2 2 1 SCOP 47741 CO dehydrogenase ISP C-domain like
2 2 2 0 SCOP 55550 SH2 domain
2 2 1 0 SCOP 54782 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
2 2 2 0 SCOP 102735 Trigger factor ribosome-binding domain
2 2 2 0 SCOP 74924 Cap-Gly domain
2 2 2 1 SCOP 47446 Signal peptide-binding domain
2 2 1 0 SCOP 54991 Anticodon-binding domain of PheRS
2 2 2 0 SCOP 110221 AbfB domain
2 2 1 0 SCOP 116742 eIF2alpha middle domain-like
2 1 1 0 SCOP 49854 Spermadhesin, CUB domain
2 2 2 1 SCOP 89817 Mago nashi protein
2 2 2 0 SCOP 48097 Regulator of G-protein signaling, RGS
2 2 2 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
2 2 1 1 SCOP 69012 alpha-ketoacid dehydrogenase kinase, N-terminal domain
2 2 2 0 SCOP 103107 Hypothetical protein c14orf129, hspc210
2 2 2 0 SCOP 57414 Hairpin loop containing domain-like
2 2 2 0 SCOP 55261 GAD domain-like
2 2 1 0 SCOP 50386 STI-like
2 2 1 1 SCOP 109920 Hypothetical protein At3g22680
2 2 1 1 SCOP 110993 eIF-2-alpha, C-terminal domain
2 2 1 0 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
2 2 1 0 SCOP 101931 Pym (Within the bgcn gene intron protein, WIBG), N-terminal domain
2 2 2 0 SCOP 47031 Second domain of FERM
2 2 1 0 SCOP 69848 LCCL domain
2 2 2 0 SCOP 63862 Thiamin pyrophosphokinase, substrate-binding domain
2 2 2 0 SCOP 55653 Ribosomal protein L9 C-domain
2 2 2 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
2 2 2 0 SCOP 63433 Fumarylacetoacetate hydrolase, FAH, N-terminal domain
2 2 1 0 SCOP 54364 Translation initiation factor IF3, N-terminal domain
2 2 2 1 SCOP 81767 Pre-protein crosslinking domain of SecA
2 2 2 0 SCOP 102741 Obg GTP-binding protein C-terminal domain
2 2 2 0 SCOP 101224 HAND domain of the nucleosome remodeling ATPase ISWI
2 1 1 1 SCOP 50382 Agglutinin
2 2 1 0 SCOP 109728 Hypothetical protein AF0491, middle domain
1 1 1 0 SCOP 161098 MetI-like
1 1 1 1 SCOP 53178 Peptidyl-tRNA hydrolase-like
1 1 1 1 SCOP 52141 Uracil-DNA glycosylase-like
1 1 1 0 SCOP 82607 YbaB-like
1 1 1 1 SCOP 64263 Prokaryotic ribosomal protein L17
1 1 1 1 SCOP 51658 Xylose isomerase-like
1 1 1 1 SCOP 75625 YebC-like
1 1 1 0 SCOP 109998 Triger factor/SurA peptide-binding domain-like
1 1 1 0 SCOP 89623 Ribose/Galactose isomerase RpiB/AlsB
1 1 1 0 SCOP 54285 MoaD/ThiS
1 1 1 0 SCOP 56935 Porins
1 1 1 0 SCOP 54060 His-Me finger endonucleases
1 1 1 0 SCOP 81452 Cytochrome c oxidase subunit III-like
1 1 1 0 SCOP 117991 YbeD/HP0495-like
1 1 1 0 SCOP 54762 Signal recognition particle alu RNA binding heterodimer, SRP9/14
1 1 1 0 SCOP 111278 SSo0622-like
1 1 1 0 SCOP 81411 Mitochondrial cytochrome c oxidase subunit VIa
1 1 1 0 SCOP 159468 AtpF-like
1 1 1 0 SCOP 69103 Arp2/3 complex 16 kDa subunit ARPC5
1 1 1 0 SCOP 110849 ParB/Sulfiredoxin
1 1 1 0 SCOP 143870 PF0523-like
1 1 1 0 SCOP 48690 Epsilon subunit of mitochondrial F1F0-ATP synthase
1 1 1 0 SCOP 63562 RPB6/omega subunit-like
1 1 1 0 SCOP 141734 HisI-like
1 1 1 1 SCOP 81342 Transmembrane di-heme cytochromes
1 1 1 0 SCOP 81536 Subunit III of photosystem I reaction centre, PsaF
1 1 1 0 SCOP 111038 YjbQ-like
1 1 1 1 SCOP 51717 Dihydropteroate synthetase-like
1 1 1 0 SCOP 56601 beta-lactamase/transpeptidase-like
1 1 1 0 SCOP 103642 Sec-C motif
1 1 1 0 SCOP 58100 Bacterial hemolysins
1 1 1 0 SCOP 82697 PurS-like
1 1 1 0 SCOP 53807 "Helical backbone" metal receptor
1 1 1 0 SCOP 55083 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
1 1 1 0 SCOP 55166 Hedgehog/DD-peptidase
1 1 1 1 SCOP 143990 YbiA-like
1 1 1 0 SCOP 54690 Molybdopterin synthase subunit MoaE
1 1 1 0 SCOP 141000 Glu-tRNAGln amidotransferase C subunit
1 1 1 1 SCOP 54111 Urease, gamma-subunit
1 1 1 0 SCOP 51278 Urease, beta-subunit
1 1 1 0 SCOP 55200 Translation initiation factor IF3, C-terminal domain
1 1 1 0 SCOP 54975 Acylphosphatase/BLUF domain-like
1 1 1 0 SCOP 158997 Trm112p-like
1 1 1 0 SCOP 89095 GatB/YqeY motif
1 1 1 0 SCOP 109910 YgfY-like
1 1 1 0 SCOP 49472 Transthyretin (synonym: prealbumin)
1 1 1 0 SCOP 158694 UraD-Like
1 1 1 0 SCOP 102588 LmbE-like
1 1 1 0 SCOP 48295 TrpR-like
1 1 1 1 SCOP 110581 Indigoidine synthase A-like
1 1 1 0 SCOP 143631 ApbE-like
1 1 1 0 SCOP 56821 Prismane protein-like
1 1 1 0 SCOP 142338 CofD-like
1 1 1 1 SCOP 50486 FMT C-terminal domain-like
1 1 1 0 SCOP 50939 Sialidases
1 1 1 0 SCOP 100939 SPOC domain-like
1 1 1 0 SCOP 160631 SMI1/KNR4-like
1 1 1 0 SCOP 50346 PRC-barrel domain
1 1 1 0 SCOP 160350 Rnp2-like
1 1 1 0 SCOP 69695 SRP19
1 1 1 0 SCOP 63867 MoeA C-terminal domain-like
1 1 1 0 SCOP 141255 YccV-like
1 1 1 0 SCOP 102110 (2r)-phospho-3-sulfolactate synthase ComA
1 1 1 0 SCOP 58104 Methyl-accepting chemotaxis protein (MCP) signaling domain
1 1 1 0 SCOP 55234 Cyanase C-terminal domain
1 1 1 1 SCOP 142877 EndoU-like
1 1 1 0 SCOP 160059 PriA/YqbF domain
1 1 1 0 SCOP 82679 N-utilization substance G protein NusG, N-terminal domain
1 1 1 0 SCOP 56436 C-type lectin-like
1 1 1 0 SCOP 69055 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
1 1 1 0 SCOP 49373 Invasin/intimin cell-adhesion fragments
1 1 1 0 SCOP 56037 PheT/TilS domain
1 1 1 0 SCOP 75704 Mitotic arrest deficient-like 1, Mad1
1 1 1 0 SCOP 58022 XRCC4, C-terminal oligomerization domain
1 1 1 0 SCOP 81464 Cytochrome c oxidase subunit II-like, transmembrane region
1 1 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
1 1 1 1 SCOP 110111 Ctag/Cox11
1 1 1 0 SCOP 81585 PsbU/PolX domain-like
1 1 1 0 SCOP 68912 Rho N-terminal domain-like
1 1 1 1 SCOP 54810 GMP synthetase C-terminal dimerisation domain
1 1 1 1 SCOP 140869 GUN4-like
1 1 1 0 SCOP 46600 C-terminal UvrC-binding domain of UvrB
1 1 1 0 SCOP 47144 HSC20 (HSCB), C-terminal oligomerisation domain
1 1 1 0 SCOP 110921 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
1 1 1 0 SCOP 51984 MurCD N-terminal domain
1 1 1 1 SCOP 63882 MoeA N-terminal region -like
1 1 1 0 SCOP 141259 CarD-like
1 1 1 0 SCOP 82861 Mechanosensitive channel protein MscS (YggB), transmembrane region
1 1 1 0 SCOP 56973 Aerolisin/ETX pore-forming domain
1 1 1 0 SCOP 75420 YhbC-like, N-terminal domain
1 1 1 0 SCOP 81624 N-terminal domain of MutM-like DNA repair proteins
1 1 1 1 SCOP 141493 Allene oxide cyclase-like
1 1 1 0 SCOP 55904 Ornithine decarboxylase C-terminal domain
1 1 1 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
1 1 1 0 SCOP 50923 Hemopexin-like domain
1 1 1 0 SCOP 82109 MIR domain
1 1 1 1 SCOP 140984 PTPA-like
1 1 1 0 SCOP 117839 WWE domain
1 1 1 0 SCOP 50084 Myosin S1 fragment, N-terminal domain
1 1 1 0 SCOP 50911 Mannose 6-phosphate receptor domain
1 1 1 0 SCOP 57774 Microbial and mitochondrial ADK, insert "zinc finger" domain
1 1 1 1 SCOP 54966 RuBisCO, large subunit, small (N-terminal) domain
1 1 1 0 SCOP 50916 Rap30/74 interaction domains
1 1 1 1 SCOP 47212 FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
1 1 1 0 SCOP 81872 BRCA2 helical domain
1 1 1 0 SCOP 56194 Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
1 1 1 1 SCOP 88802 Pre-PUA domain
1 1 1 0 SCOP 63763 SAND domain-like
1 1 1 0 SCOP 49758 Calpain large subunit, middle domain (domain III)
1 1 1 0 SCOP 160897 Taf5 N-terminal domain-like
1 1 1 1 SCOP 49441 Cytochrome f, large domain
1 1 1 0 SCOP 103431 Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor
1 1 1 0 SCOP 144256 TSP9-like
1 1 1 0 SCOP 143517 TRCF domain-like
1 1 1 0 SCOP 47802 DNA polymerase beta, N-terminal domain-like
1 1 1 0 SCOP 81799 Putative methyltransferase TM0872, insert domain
1 1 1 0 SCOP 82653 Probable GTPase Der, C-terminal domain
1 1 1 0 SCOP 47055 TAF(II)230 TBP-binding fragment
1 1 1 0 SCOP 46915 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
1 1 1 0 SCOP 109736 FGAM synthase PurL, linker domain
1 1 1 0 SCOP 160996 HI0933 insert domain-like
1 1 1 0 SCOP 81878 BRCA2 tower domain

Jump to [ Top of page · Assignment statistics ]


The following superfamilies have one or more weak hits:

SCOP superfamily Troponin coil-coiled subunits
SCOP superfamily Head morphogenesis protein gp7
SCOP superfamily Neurotransmitter-gated ion-channel transmembrane pore
SCOP superfamily YajQ-like
SCOP superfamily Proguanylin
SCOP superfamily Inhibitor of vertebrate lysozyme, Ivy
SCOP superfamily Doublecortin (DC)
SCOP superfamily CoA-transferase family III (CaiB/BaiF)
SCOP superfamily Collagen-binding domain
SCOP superfamily Gametocyte protein Pfg27
SCOP superfamily Cobalamin adenosyltransferase-like
SCOP superfamily Receptor-binding domain of short tail fibre protein gp12
SCOP superfamily Satellite viruses
SCOP superfamily Group I dsDNA viruses
SCOP superfamily ssDNA viruses
SCOP superfamily Positive stranded ssRNA viruses
SCOP superfamily Apolipoprotein A-II
SCOP superfamily Tumor suppressor gene product Apc
SCOP superfamily Cysteine-rich DNA binding domain, (DM domain)
SCOP superfamily L-A virus major coat protein
SCOP superfamily MesJ substrate recognition domain-like
SCOP superfamily Replication modulator SeqA, C-terminal DNA-binding domain
SCOP superfamily OsmC-like
SCOP superfamily Mechanosensitive channel protein MscS (YggB), C-terminal domain
SCOP superfamily SEA domain
SCOP superfamily DAK1/DegV-like
SCOP superfamily GckA/TtuD-like
SCOP superfamily BAH domain
SCOP superfamily Viral chemokine binding protein m3
SCOP superfamily Calcium-mediated lectin
SCOP superfamily Myosin phosphatase inhibitor 17kDa protein, CPI-17
SCOP superfamily Crustacean CHH/MIH/GIH neurohormone
SCOP superfamily Protein serine/threonine phosphatase 2C, C-terminal domain
SCOP superfamily Nucleotidyltransferase substrate binding subunit/domain
SCOP superfamily F1F0 ATP synthase subunit B, membrane domain
SCOP superfamily Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
SCOP superfamily Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
SCOP superfamily Cytochrome c oxidase subunit I-like
SCOP superfamily Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
SCOP superfamily Mitochondrial cytochrome c oxidase subunit VIc
SCOP superfamily Mitochondrial cytochrome c oxidase subunit IV
SCOP superfamily ABC transporter involved in vitamin B12 uptake, BtuC
SCOP superfamily Gated mechanosensitive channel
SCOP superfamily Small-conductance potassium channel
SCOP superfamily Family A G protein-coupled receptor-like
SCOP superfamily C-terminal domain of mollusc hemocyanin
SCOP superfamily Rad50 coiled-coil Zn hook
SCOP superfamily Chemotaxis phosphatase CheZ
SCOP superfamily Pheromone-binding domain of LuxR-like quorum-sensing transcription factors
SCOP superfamily Putative transcriptional regulator TM1602, C-terminal domain
SCOP superfamily Hypothetical protein MTH1880
SCOP superfamily VSV matrix protein
SCOP superfamily Plakin repeat
SCOP superfamily V-region of surface antigen I/II (SA I/II, PAC)
SCOP superfamily Major surface antigen p30, SAG1
SCOP superfamily Lamin A/C globular tail domain
SCOP superfamily Aconitase B, N-terminal domain
SCOP superfamily Ribosomal protein L20
SCOP superfamily TolA/TonB C-terminal domain
SCOP superfamily C-terminal domain of PLC-beta
SCOP superfamily Eea1 homodimerisation domain
SCOP superfamily OMPT-like
SCOP superfamily Membrane penetration protein mu1
SCOP superfamily Transcription factor NusA, N-terminal domain
SCOP superfamily Arp2/3 complex subunits
SCOP superfamily Cell wall binding repeat
SCOP superfamily Phage fibre proteins
SCOP superfamily Urease metallochaperone UreE, N-terminal domain
SCOP superfamily Phage tail proteins
SCOP superfamily Integrin domains
SCOP superfamily Quinohemoprotein amine dehydrogenase C chain
SCOP superfamily Nuclear receptor coactivator interlocking domain
SCOP superfamily AhpD-like
SCOP superfamily Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain
SCOP superfamily Hypothetical protein YjbJ
SCOP superfamily Bcr-Abl oncoprotein oligomerization domain
SCOP superfamily RecG, N-terminal domain
SCOP superfamily F1 ATPase inhibitor, IF1, C-terminal domain
SCOP superfamily Intermediate filament protein, coiled coil region
SCOP superfamily DNA-binding domain of intron-encoded endonucleases
SCOP superfamily Outer capsid protein sigma 3
SCOP superfamily YopH tyrosine phosphatase N-terminal domain
SCOP superfamily Chorismate lyase-like
SCOP superfamily Ribonuclease domain of colicin E3
SCOP superfamily Cytolysin/lectin
SCOP superfamily Nicotinic receptor ligand binding domain-like
SCOP superfamily Ganglioside M2 (gm2) activator
SCOP superfamily Outer surface protein C (OspC)
SCOP superfamily Frizzled cysteine-rich domain
SCOP superfamily RNA polymerase subunits
SCOP superfamily Colicin Ia, N-terminal domain
SCOP superfamily Clostridium neurotoxins, "coiled-coil" domain
SCOP superfamily Variant surface glycoprotein (N-terminal domain)
SCOP superfamily Virus ectodomain
SCOP superfamily Influenza hemagglutinin (stalk)
SCOP superfamily N-terminal coiled coil domain from apc
SCOP superfamily Outer membrane lipoprotein
SCOP superfamily Multimerization domain of the phosphoprotein from sendai virus
SCOP superfamily Rotavirus nonstructural proteins
SCOP superfamily Delta-sleep-inducing peptide immunoreactive peptide
SCOP superfamily Coiled-coil dimerization domain from cortexillin I
SCOP superfamily Fibrinogen coiled-coil and central regions
SCOP superfamily Assembly domain of cartilage oligomeric matrix protein
SCOP superfamily Chicken cartilage matrix protein
SCOP superfamily Inhibitor of apoptosis (IAP) repeat
SCOP superfamily Zn-binding domains of ADDBP
SCOP superfamily Zinc domain conserved in yeast copper-regulated transcription factors
SCOP superfamily Metallothionein
SCOP superfamily Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
SCOP superfamily Hypothetical protein MTH1184
SCOP superfamily Zn2/Cys6 DNA-binding domain
SCOP superfamily HIV-1 VPU cytoplasmic domain
SCOP superfamily Cholecystokinin A receptor, N-domain
SCOP superfamily GLA-domain
SCOP superfamily Invertebrate chitin-binding proteins
SCOP superfamily Carboxypeptidase inhibitor
SCOP superfamily Thyroglobulin type-1 domain
SCOP superfamily FnI-like domain
SCOP superfamily TNF receptor-like
SCOP superfamily Serine protease inhibitors
SCOP superfamily Methylamine dehydrogenase, L chain
SCOP superfamily Complement control module/SCR domain
SCOP superfamily Cystine-knot cytokines
SCOP superfamily Kringle-like
SCOP superfamily LDL receptor-like module
SCOP superfamily Defensin-like
SCOP superfamily Snake toxin-like
SCOP superfamily Colipase-like
SCOP superfamily Growth factor receptor domain
SCOP superfamily Neurotoxin B-IV
SCOP superfamily Viral glycoprotein, central and dimerisation domains
SCOP superfamily Leukocidin-like
SCOP superfamily Outer membrane efflux proteins (OEP)
SCOP superfamily Exotoxin A, middle domain
SCOP superfamily Bcl-2 inhibitors of programmed cell death
SCOP superfamily Colicin
SCOP superfamily DNA primase core
SCOP superfamily Baseplate structural protein gp11
SCOP superfamily Fibrinogen C-terminal domain-like
SCOP superfamily A heparin-binding domain
SCOP superfamily Ribosome inactivating proteins (RIP)
SCOP superfamily Nitrile hydratase alpha chain
SCOP superfamily Sporulation response regulatory protein Spo0B
SCOP superfamily N-acetylmuramoyl-L-alanine amidase-like
SCOP superfamily 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
SCOP superfamily Origin of replication-binding domain, RBD-like
SCOP superfamily tRNA-intron endonuclease N-terminal domain-like
SCOP superfamily Nucleotide cyclase
SCOP superfamily CheY-binding domain of CheA
SCOP superfamily Viral DNA-binding domain
SCOP superfamily Heme-binding protein A (HasA)
SCOP superfamily DNA-binding domain of Mlu1-box binding protein MBP1
SCOP superfamily MHC antigen-recognition domain
SCOP superfamily Prion-like
SCOP superfamily RNase A-like
SCOP superfamily Microbial ribonucleases
SCOP superfamily Glutaminase/Asparaginase
SCOP superfamily FucI/AraA N-terminal and middle domains
SCOP superfamily HybD-like
SCOP superfamily Nitrogenase accessory factor-like
SCOP superfamily PTS system fructose IIA component-like
SCOP superfamily RNA 3'-terminal phosphate cyclase, RPTC, insert domain
SCOP superfamily PTS IIb component
SCOP superfamily N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
SCOP superfamily Barstar-related
SCOP superfamily Cobalamin (vitamin B12)-dependent enzymes
SCOP superfamily Bacterial luciferase-like
SCOP superfamily E2 regulatory, transactivation domain
SCOP superfamily Hedgehog/intein (Hint) domain
SCOP superfamily Duplicated hybrid motif
SCOP superfamily An insect antifreeze protein
SCOP superfamily Insect cysteine-rich antifreeze protein
SCOP superfamily delta-Endotoxin (insectocide), middle domain
SCOP superfamily Outer surface protein
SCOP superfamily Bacteriochlorophyll A protein
SCOP superfamily Nitrous oxide reductase, N-terminal domain
SCOP superfamily D-aminopeptidase, middle and C-terminal domains
SCOP superfamily Core binding factor beta, CBF
SCOP superfamily mu transposase, C-terminal domain
SCOP superfamily TIMP-like
SCOP superfamily Bacterial enterotoxins
SCOP superfamily N-terminal domains of the minor coat protein g3p
SCOP superfamily Cell growth inhibitor/plasmid maintenance toxic component
SCOP superfamily Soluble secreted chemokine inhibitor, VCCI
SCOP superfamily TNF-like
SCOP superfamily Virus attachment protein globular domain
SCOP superfamily ENV polyprotein, receptor-binding domain
SCOP superfamily Neurophysin II
SCOP superfamily Rab geranylgeranyltransferase alpha-subunit, insert domain
SCOP superfamily Periplasmic chaperone C-domain
SCOP superfamily alpha-Amylase inhibitor tendamistat
SCOP superfamily Aromatic compound dioxygenase
SCOP superfamily VHL
SCOP superfamily p53-like transcription factors
SCOP superfamily Bacterial adhesins
SCOP superfamily Carbohydrate-binding domain
SCOP superfamily Diphtheria toxin, C-terminal domain
SCOP superfamily Immunoglobulin
SCOP superfamily Multiheme cytochromes
SCOP superfamily Moesin tail domain
SCOP superfamily FinO-like
SCOP superfamily Tetraspanin
SCOP superfamily Nuclear receptor ligand-binding domain
SCOP superfamily Tetracyclin repressor-like, C-terminal domain
SCOP superfamily Lipovitellin-phosvitin complex, superhelical domain
SCOP superfamily Ras GEF
SCOP superfamily Aldehyde ferredoxin oxidoreductase, C-terminal domains
SCOP superfamily Influenza virus matrix protein M1
SCOP superfamily Transcription factor STAT-4 N-domain
SCOP superfamily DBL homology domain (DH-domain)
SCOP superfamily Hemocyanin, N-terminal domain
SCOP superfamily FliG
SCOP superfamily N-terminal domain of DnaB helicase
SCOP superfamily DEATH domain
SCOP superfamily Retrovirus capsid protein, N-terminal core domain
SCOP superfamily Functional domain of the splicing factor Prp18
SCOP superfamily Wiscott-Aldrich syndrome protein, WASP, C-terminal domain
SCOP superfamily Bacteriocin AS-48
SCOP superfamily Apolipophorin-III
SCOP superfamily lambda integrase-like, N-terminal domain
SCOP superfamily Rad51 N-terminal domain-like
SCOP superfamily C-terminal domain of RNA polymerase alpha subunit
SCOP superfamily Chemotaxis receptor methyltransferase CheR, N-terminal domain
SCOP superfamily Anaphylotoxins (complement system)
SCOP superfamily STAT
SCOP superfamily Methionine synthase domain
SCOP superfamily Insect pheromone/odorant-binding proteins
SCOP superfamily Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
SCOP superfamily ROP protein
SCOP superfamily Retrovirus capsid dimerization domain-like
SCOP superfamily Colicin E immunity proteins
SCOP superfamily 4-helical cytokines
SCOP superfamily Bacterial GAP domain
SCOP superfamily Proteasome activator
SCOP superfamily Hemerythrin-like
SCOP superfamily Cytochromes
SCOP superfamily Aspartate receptor, ligand-binding domain
SCOP superfamily Apolipoprotein
SCOP superfamily Mitochondrial import receptor subunit Tom20
SCOP superfamily Diol dehydratase, gamma subunit
SCOP superfamily Fertilization protein
SCOP superfamily RAP domain-like
SCOP superfamily Kix domain of CBP (creb binding protein)
SCOP superfamily Bacterial immunoglobulin/albumin-binding domains
SCOP superfamily Enzyme IIa from lactose specific PTS, IIa-lac
SCOP superfamily Spectrin repeat
SCOP superfamily RNA polymerase subunit RPB10
SCOP superfamily Methylated DNA-protein cysteine methyltransferase, C-terminal domain
SCOP superfamily Epsilon subunit of F1F0-ATP synthase C-terminal domain
SCOP superfamily Eukaryotic DNA topoisomerase I, dispensable insert domain
SCOP superfamily HR1 repeat
SCOP superfamily GreA transcript cleavage protein, N-terminal domain
SCOP superfamily PspA lactotransferrin-binding region
SCOP superfamily RILP dimerisation region
SCOP superfamily T-antigen specific domain-like
SCOP superfamily E6 C-terminal domain-like
SCOP superfamily YfgJ-like
SCOP superfamily MgtE membrane domain-like
SCOP superfamily SNF-like
SCOP superfamily PsbZ-like
SCOP superfamily Viral glycoprotein ectodomain-like
SCOP superfamily AF1531-like
SCOP superfamily MalF N-terminal region-like
SCOP superfamily YacF-like
SCOP superfamily Lp2179-like
SCOP superfamily YehR-like
SCOP superfamily BT0923-like
SCOP superfamily EscU C-terminal domain-like
SCOP superfamily YueI-like
SCOP superfamily BRK domain-like
SCOP superfamily BLRF2-like
SCOP superfamily PG1857-like
SCOP superfamily BH3703-like
SCOP superfamily MTH889-like
SCOP superfamily Bacterial polysaccharide co-polymerase-like
SCOP superfamily EspE N-terminal domain-like
SCOP superfamily FlaG-like
SCOP superfamily YcgL-like
SCOP superfamily NSP3A-like
SCOP superfamily YerB-like
SCOP superfamily CobE/GbiG C-terminal domain-like
SCOP superfamily Cgl1923-like
SCOP superfamily Guanosine diphospho-D-mannose pyrophosphorylase/mannose-6-phosphate isomerase linker domain
SCOP superfamily FomD-like
SCOP superfamily TrmB C-terminal domain-like
SCOP superfamily Lipase chaperone-like
SCOP superfamily MgtE N-terminal domain-like
SCOP superfamily TerB-like
SCOP superfamily Sama2622-like
SCOP superfamily RPA2825-like
SCOP superfamily YheA/YmcA-like
SCOP superfamily BH3980-like
SCOP superfamily TAFH domain-like
SCOP superfamily FLJ32549 domain-like
SCOP superfamily HAMP domain-like
SCOP superfamily Ta0600-like
SCOP superfamily Bacillus cereus metalloprotein-like
SCOP superfamily SO2669-like
SCOP superfamily HP0062-like
SCOP superfamily occludin/ELL-like
SCOP superfamily Sec2 N-terminal region
SCOP superfamily MPN010-like
SCOP superfamily Vanabin-like
SCOP superfamily Heme iron utilization protein-like
SCOP superfamily ImpE-like
SCOP superfamily FdhE-like
SCOP superfamily ORC1-binding domain
SCOP superfamily L,D-transpeptidase pre-catalytic domain-like
SCOP superfamily NE0471 N-terminal domain-like
SCOP superfamily ERH-like
SCOP superfamily Phage tail protein-like
SCOP superfamily GlcG-like
SCOP superfamily YeeU-like
SCOP superfamily PHP14-like
SCOP superfamily GAS2 domain-like
SCOP superfamily YkuJ-like
SCOP superfamily Prenyltransferase-like
SCOP superfamily TM1622-like
SCOP superfamily TTP0101/SSO1404-like
SCOP superfamily Rv2632c-like
SCOP superfamily YefM-like
SCOP superfamily TTHA1013/TTHA0281-like
SCOP superfamily Coronavirus NSP8-like
SCOP superfamily RelE-like
SCOP superfamily YjbR-like
SCOP superfamily PhtA domain-like
SCOP superfamily ComB-like
SCOP superfamily CAC2185-like
SCOP superfamily CinA-like
SCOP superfamily MFPT repeat-like
SCOP superfamily MOSC N-terminal domain-like
SCOP superfamily YdhA-like
SCOP superfamily Hcp1-like
SCOP superfamily PA2021-like
SCOP superfamily GatD N-terminal domain-like
SCOP superfamily Kinase-associated protein B-like
SCOP superfamily Atu1913-like
SCOP superfamily Agglutinin HPA-like
SCOP superfamily RelB-like
SCOP superfamily Fic-like
SCOP superfamily PriB N-terminal domain-like
SCOP superfamily Pseudo ankyrin repeat-like
SCOP superfamily USP8 N-terminal domain-like
SCOP superfamily Rhabdovirus nucleoprotein-like
SCOP superfamily Phage replication organizer domain
SCOP superfamily IpaD-like
SCOP superfamily Hyaluronidase post-catalytic domain-like
SCOP superfamily YozE-like
SCOP superfamily Dcp2 domain-like
SCOP superfamily HIV integrase-binding domain
SCOP superfamily FlgN-like
SCOP superfamily TM0693-like
SCOP superfamily LemA-like
SCOP superfamily EsxAB dimer-like
SCOP superfamily MW0975(SA0943)-like
SCOP superfamily YppE-like
SCOP superfamily EF2458-like
SCOP superfamily Coronavirus NSP7-like
SCOP superfamily SPy1572-like
SCOP superfamily Calcyclin-binding protein-like
SCOP superfamily ISY1 domain-like
SCOP superfamily HSP33 redox switch-like
SCOP superfamily Variant surface glycoprotein MITAT 1.2, VSG 221, C-terminal domain
SCOP superfamily Connexin43
SCOP superfamily Proton glutamate symport protein
SCOP superfamily Viral ssDNA binding protein
SCOP superfamily YaeB-like
SCOP superfamily Phosphoprotein M1, C-terminal domain
SCOP superfamily RalF, C-terminal domain
SCOP superfamily TM1457-like
SCOP superfamily CRISPR-associated protein
SCOP superfamily Flagellar hook protein flgE
SCOP superfamily Putative glucosidase YicI, C-terminal domain
SCOP superfamily Hypothetical protein PA1324
SCOP superfamily YfbU-like
SCOP superfamily EspA/CesA-like
SCOP superfamily Hook domain
SCOP superfamily XseB-like
SCOP superfamily DNA methylase specificity domain
SCOP superfamily TrkA C-terminal domain-like
SCOP superfamily Fzo-like conserved region
SCOP superfamily Coronavirus S2 glycoprotein
SCOP superfamily Geminin coiled-coil domain
SCOP superfamily YAP1 redox domain
SCOP superfamily Hormone receptor domain
SCOP superfamily OmpH-like
SCOP superfamily HlyD-like secretion proteins
SCOP superfamily Tsx-like channel
SCOP superfamily Mitochondrial ATP synthase coupling factor 6
SCOP superfamily Rap/Ran-GAP
SCOP superfamily CbiD-like
SCOP superfamily Urocanase
SCOP superfamily Recombination protein RecR
SCOP superfamily Sulfolobus fructose-1,6-bisphosphatase-like
SCOP superfamily Hypothetical protein yfbM
SCOP superfamily Hypothetical protein PF0899
SCOP superfamily Sporulation related repeat
SCOP superfamily Hypothetical protein MTH677
SCOP superfamily CutC-like
SCOP superfamily GlpP-like
SCOP superfamily Coronavirus RNA-binding domain
SCOP superfamily GDNF receptor-like
SCOP superfamily Her-1
SCOP superfamily Hypothetical protein MG354
SCOP superfamily Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain
SCOP superfamily I/LWEQ domain
SCOP superfamily NblA-like
SCOP superfamily CAPPD, an extracellular domain of amyloid beta A4 protein
SCOP superfamily Hypothetical protein D-63
SCOP superfamily Domain from hypothetical 2610208m17rik protein
SCOP superfamily PhoU-like
SCOP superfamily Alpha-hemoglobin stabilizing protein AHSP
SCOP superfamily KRAB domain (Kruppel-associated box)
SCOP superfamily Transcriptional repressor TraM
SCOP superfamily Proline/betaine transporter ProP, C-terminal cytoplasmic domain
SCOP superfamily G protein-binding domain
SCOP superfamily CCHHC domain
SCOP superfamily Plexin repeat
SCOP superfamily Respiratory nitrate reductase 1 gamma chain
SCOP superfamily 39 kda initiator binding protein, IBP39, C-terminal domains
SCOP superfamily Virulence-associated V antigen
SCOP superfamily NinB
SCOP superfamily MoaD-related protein, C-terminal domain
SCOP superfamily OmpA-like
SCOP superfamily Holliday junction resolvase RusA
SCOP superfamily General secretion pathway protein M, EpsM
SCOP superfamily CheC-like
SCOP superfamily Hypothetical protein YwqG
SCOP superfamily Chromosomal protein MC1
SCOP superfamily mRNA decapping enzyme DcpS N-terminal domain
SCOP superfamily Cell division protein ZapA-like
SCOP superfamily Putative dsDNA mimic
SCOP superfamily NIF3 (NGG1p interacting factor 3)-like
SCOP superfamily CoaB-like
SCOP superfamily Bacterial fluorinating enzyme, N-terminal domain
SCOP superfamily F420-dependent methylenetetrahydromethanopterin dehydrogenase (MTD)
SCOP superfamily AXH domain
SCOP superfamily Adhesin YadA, collagen-binding domain
SCOP superfamily Sema domain
SCOP superfamily Apyrase
SCOP superfamily Hypothetical protein YgiW
SCOP superfamily Hydrophobin II, HfbII
SCOP superfamily SspB-like
SCOP superfamily Hypothetical protein YfhH
SCOP superfamily Smp-1-like
SCOP superfamily Dextranase, N-terminal domain
SCOP superfamily Anti-sigma factor FlgM
SCOP superfamily Stathmin
SCOP superfamily ADP-ribosylglycohydrolase
SCOP superfamily DhaL-like
SCOP superfamily Hypothetical protein ST1625
SCOP superfamily C-terminal domain of Ku80
SCOP superfamily Hsp90 co-chaperone CDC37
SCOP superfamily YcfC-like
SCOP superfamily YutG-like
SCOP superfamily GRIP domain
SCOP superfamily Flagellar export chaperone FliS
SCOP superfamily Typo IV secretion system protein TraC
SCOP superfamily IP3 receptor type 1 binding core, domain 2
SCOP superfamily Plant proteinase inhibitors
SCOP superfamily Kazal-type serine protease inhibitors

Jump to [ Top of page · Assignment statistics ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.