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  Home > Genomes > Superfamily assignments for Aquilegia coerulea v195


Aquilegia coerulea v195 superfamily assignments

Taxonomy
Taxonomy browser entry

Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; early-diverging eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia; Aquilegia coerulea

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Fasta format sequences
Domain assignments

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Assignment statistics

Sequences: 41063 total
26825 (65 %) with assignment
435 average length
45 % amino acid coverage
Domains: 39229 total
984 unique superfamilies
816 unique families
302 average length
39.9 average superfamily size
97 % formed by duplication
Domain combinations: 989 domain pairs
3670 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies
2589 2105 259 11 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
1719 1706 151 4 SCOP 56112 Protein kinase-like (PK-like)
845 611 67 1 SCOP 54928 RNA-binding domain, RBD
818 719 107 3 SCOP 57850 RING/U-box
809 655 108 2 SCOP 52058 L domain-like
796 633 104 10 SCOP 48371 ARM repeat
757 749 52 8 SCOP 51735 NAD(P)-binding Rossmann-fold domains
710 705 59 0 SCOP 81383 F-box domain
703 563 74 2 SCOP 48452 TPR-like
580 577 18 8 SCOP 53474 alpha/beta-Hydrolases
578 504 30 17 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
574 531 64 1 SCOP 50978 WD40 repeat-like
551 550 6 1 SCOP 48264 Cytochrome P450
482 480 43 7 SCOP 51445 (Trans)glycosidases
473 418 36 2 SCOP 46689 Homeodomain-like
470 431 67 0 SCOP 52047 RNI-like
431 372 48 5 SCOP 52833 Thioredoxin-like
408 218 43 4 SCOP 54236 Ubiquitin-like
361 353 6 0 SCOP 103473 MFS general substrate transporter
337 329 9 5 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
325 325 36 8 SCOP 56784 HAD-like
305 216 62 5 SCOP 50249 Nucleic acid-binding proteins
265 263 30 4 SCOP 53098 Ribonuclease H-like
260 221 34 6 SCOP 51905 FAD/NAD(P)-binding domain
256 139 19 1 SCOP 90123 ABC transporter transmembrane region
255 237 35 1 SCOP 47473 EF-hand
252 229 49 1 SCOP 48403 Ankyrin repeat
251 237 38 4 SCOP 46785 "Winged helix" DNA-binding domain
247 244 17 2 SCOP 51197 Clavaminate synthase-like
238 238 27 9 SCOP 54001 Cysteine proteinases
229 178 11 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
227 109 12 2 SCOP 49503 Cupredoxins
224 123 24 4 SCOP 53067 Actin-like ATPase domain
214 183 53 1 SCOP 57903 FYVE/PHD zinc finger
213 153 28 0 SCOP 57667 beta-beta-alpha zinc fingers
212 211 14 5 SCOP 53448 Nucleotide-diphospho-sugar transferases
192 192 31 1 SCOP 46565 Chaperone J-domain
190 80 28 1 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
188 188 6 0 SCOP 47459 HLH, helix-loop-helix DNA-binding domain
186 161 17 1 SCOP 55961 Bet v1-like
183 147 16 1 SCOP 101936 DNA-binding pseudobarrel domain
183 127 33 1 SCOP 49562 C2 domain (Calcium/lipid-binding domain, CaLB)
182 88 30 0 SCOP 90229 CCCH zinc finger
180 150 27 0 SCOP 81901 HCP-like
162 149 28 0 SCOP 54695 POZ domain
161 135 8 6 SCOP 51182 RmlC-like cupins
159 156 7 3 SCOP 51126 Pectin lyase-like
153 84 24 1 SCOP 55021 ACT-like
150 145 8 5 SCOP 53383 PLP-dependent transferases
148 148 21 3 SCOP 49899 Concanavalin A-like lectins/glucanases
148 91 12 1 SCOP 47954 Cyclin-like
146 124 12 1 SCOP 54171 DNA-binding domain
139 107 22 2 SCOP 49785 Galactose-binding domain-like
134 134 8 1 SCOP 81606 PP2C-like
130 121 33 8 SCOP 54211 Ribosomal protein S5 domain 2-like
129 95 15 0 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
126 91 10 3 SCOP 48239 Terpenoid cyclases/Protein prenyltransferases
124 124 10 4 SCOP 56300 Metallo-dependent phosphatases
123 122 5 1 SCOP 52266 SGNH hydrolase
121 113 28 4 SCOP 52374 Nucleotidylyl transferase
117 117 16 1 SCOP 81665 Calcium ATPase, transmembrane domain M
116 116 20 3 SCOP 52402 Adenine nucleotide alpha hydrolases-like
116 116 3 1 SCOP 48113 Heme-dependent peroxidases
116 89 25 0 SCOP 57756 Retrovirus zinc finger-like domains
113 113 13 1 SCOP 47616 GST C-terminal domain-like
113 113 4 1 SCOP 47699 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
112 39 10 1 SCOP 63411 LuxS/MPP-like metallohydrolase
111 110 31 3 SCOP 81296 E set domains
110 60 6 2 SCOP 53901 Thiolase-like
110 110 14 1 SCOP 81653 Calcium ATPase, transduction domain A
109 95 15 1 SCOP 117281 Kelch motif
107 107 3 0 SCOP 55455 SRF-like
106 105 7 1 SCOP 103506 Mitochondrial carrier
105 105 7 1 SCOP 56801 Acetyl-CoA synthetase-like
104 85 8 1 SCOP 50129 GroES-like
102 102 15 0 SCOP 54277 CAD & PB1 domains
101 101 5 2 SCOP 47113 Histone-fold
101 101 7 1 SCOP 50630 Acid proteases
101 100 20 2 SCOP 82199 SET domain
101 98 9 1 SCOP 51110 alpha-D-mannose-specific plant lectins
100 99 18 2 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
100 52 11 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
99 99 6 3 SCOP 48576 Terpenoid synthases
98 90 11 4 SCOP 52096 ClpP/crotonase
98 75 19 0 SCOP 54631 CBS-domain pair
98 98 26 3 SCOP 50729 PH domain-like
97 76 15 1 SCOP 49599 TRAF domain-like
96 82 31 0 SCOP 46934 UBA-like
93 93 16 1 SCOP 101690 PAZ domain
92 92 14 4 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
91 83 23 3 SCOP 52799 (Phosphotyrosine protein) phosphatases II
91 67 16 0 SCOP 55008 HMA, heavy metal-associated domain
91 88 26 2 SCOP 50447 Translation proteins
91 51 18 0 SCOP 90209 Ran binding protein zinc finger-like
90 57 8 1 SCOP 118290 WRKY DNA-binding domain
86 86 2 1 SCOP 101941 NAC domain
84 84 7 1 SCOP 52743 Subtilisin-like
84 84 3 0 SCOP 57959 Leucine zipper domain
83 73 19 0 SCOP 81324 Voltage-gated potassium channels
82 82 9 3 SCOP 49764 HSP20-like chaperones
82 81 15 4 SCOP 74650 Galactose mutarotase-like
80 80 8 2 SCOP 54495 UBC-like
80 80 13 0 SCOP 50965 Galactose oxidase, central domain
79 26 9 2 SCOP 55753 Actin depolymerizing proteins
79 78 24 3 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
78 78 22 1 SCOP 53300 vWA-like
77 77 27 2 SCOP 55681 Class II aaRS and biotin synthetases
77 76 5 1 SCOP 103511 Chlorophyll a-b binding protein
76 69 17 2 SCOP 56219 DNase I-like
76 75 21 0 SCOP 63748 Tudor/PWWP/MBT
74 45 16 0 SCOP 54768 dsRNA-binding domain-like
73 41 9 1 SCOP 47923 Ypt/Rab-GAP domain of gyp1p
71 71 13 1 SCOP 52087 CRAL/TRIO domain
70 57 12 0 SCOP 50985 RCC1/BLIP-II
70 69 9 3 SCOP 64356 SNARE-like
70 63 13 1 SCOP 52172 CheY-like
68 67 12 1 SCOP 53850 Periplasmic binding protein-like II
68 68 4 2 SCOP 53720 ALDH-like
68 57 12 3 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
67 67 10 1 SCOP 47370 Bromodomain
66 62 18 4 SCOP 56059 Glutathione synthetase ATP-binding domain-like
65 65 15 4 SCOP 53187 Zn-dependent exopeptidases
64 39 19 0 SCOP 52113 BRCT domain
64 64 8 0 SCOP 46938 CRAL/TRIO N-terminal domain
63 61 3 1 SCOP 81338 Aquaporin-like
63 62 6 3 SCOP 53613 Ribokinase-like
63 33 11 1 SCOP 55785 PYP-like sensor domain (PAS domain)
63 63 11 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
63 63 11 4 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
63 63 4 0 SCOP 101148 Plant invertase/pectin methylesterase inhibitor
62 62 7 5 SCOP 51569 Aldolase
62 62 16 3 SCOP 81301 Nucleotidyltransferase
62 62 11 4 SCOP 54373 FAD-linked reductases, C-terminal domain
61 61 5 2 SCOP 48208 Six-hairpin glycosidases
61 60 24 3 SCOP 88697 PUA domain-like
61 61 8 1 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
60 60 13 1 SCOP 50891 Cyclophilin-like
60 41 12 0 SCOP 54160 Chromo domain-like
60 60 6 1 SCOP 48464 ENTH/VHS domain
59 47 12 1 SCOP 54534 FKBP-like
58 42 11 6 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
58 53 14 1 SCOP 51206 cAMP-binding domain-like
57 55 11 0 SCOP 58038 SNARE fusion complex
57 57 10 1 SCOP 54427 NTF2-like
56 54 9 2 SCOP 56281 Metallo-hydrolase/oxidoreductase
56 56 12 2 SCOP 52029 GroEL apical domain-like
55 55 8 7 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
55 51 12 0 SCOP 57997 Tropomyosin
53 52 8 1 SCOP 55811 Nudix
53 53 5 2 SCOP 50685 Barwin-like endoglucanases
53 24 5 0 SCOP 75471 YhbY-like
53 53 8 2 SCOP 56176 FAD-binding/transporter-associated domain-like
53 28 11 1 SCOP 54980 EF-G C-terminal domain-like
51 42 15 2 SCOP 52317 Class I glutamine amidotransferase-like
50 50 6 5 SCOP 51366 Ribulose-phoshate binding barrel
50 49 6 2 SCOP 53254 Phosphoglycerate mutase-like
50 50 6 3 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
49 49 11 6 SCOP 51556 Metallo-dependent hydrolases
49 47 5 1 SCOP 51430 NAD(P)-linked oxidoreductase
49 49 9 1 SCOP 74788 Cullin repeat-like
49 49 5 1 SCOP 81382 Skp1 dimerisation domain-like
48 48 11 4 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
48 47 18 0 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
47 12 5 0 SCOP 50199 Staphylococcal nuclease
46 46 14 1 SCOP 51011 Glycosyl hydrolase domain
46 16 10 1 SCOP 53738 Phosphoglucomutase, first 3 domains
45 34 7 2 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
45 25 2 0 SCOP 88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors
45 45 12 1 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
45 44 9 1 SCOP 48592 GroEL equatorial domain-like
44 44 7 1 SCOP 50182 Sm-like ribonucleoproteins
44 23 9 1 SCOP 56024 Phospholipase D/nuclease
44 9 5 0 SCOP 81698 FF domain
43 43 5 1 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
42 41 5 0 SCOP 53822 Periplasmic binding protein-like I
42 41 6 1 SCOP 75005 Arabinanase/levansucrase/invertase
42 35 12 0 SCOP 50156 PDZ domain-like
42 40 6 0 SCOP 54849 GroEL-intermediate domain like
41 41 10 1 SCOP 50104 Translation proteins SH3-like domain
41 41 6 1 SCOP 140990 FtsH protease domain-like
41 29 7 0 SCOP 109905 Surp module (SWAP domain)
41 29 13 0 SCOP 51045 WW domain
39 34 6 2 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
39 28 6 2 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
39 39 13 1 SCOP 49879 SMAD/FHA domain
39 39 14 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
39 27 6 0 SCOP 55658 L9 N-domain-like
39 39 8 1 SCOP 81631 PAP/OAS1 substrate-binding domain
38 38 6 3 SCOP 55120 Pseudouridine synthase
38 32 9 1 SCOP 50494 Trypsin-like serine proteases
38 29 9 0 SCOP 82153 FAS1 domain
38 35 10 0 SCOP 49452 Starch-binding domain-like
38 38 6 1 SCOP 52490 Tubulin nucleotide-binding domain-like
38 38 8 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
37 37 3 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
37 37 2 1 SCOP 56655 Carbohydrate phosphatase
37 37 7 1 SCOP 51395 FMN-linked oxidoreductases
36 32 8 2 SCOP 53271 PRTase-like
36 36 7 2 SCOP 53137 Translational machinery components
36 36 5 3 SCOP 100950 NagB/RpiA/CoA transferase-like
36 19 3 2 SCOP 51726 UROD/MetE-like
36 34 13 0 SCOP 82171 DPP6 N-terminal domain-like
36 28 4 1 SCOP 48445 14-3-3 protein
36 36 4 0 SCOP 89009 GAT-like domain
35 33 7 1 SCOP 47095 HMG-box
35 35 9 2 SCOP 109604 HD-domain/PDEase-like
35 25 8 2 SCOP 55781 GAF domain-like
35 35 4 1 SCOP 55307 Tubulin C-terminal domain-like
35 34 12 3 SCOP 63380 Riboflavin synthase domain-like
34 32 10 2 SCOP 51695 PLC-like phosphodiesterases
34 28 8 2 SCOP 53633 Carbamate kinase-like
34 34 4 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
34 34 6 0 SCOP 144091 Rhomboid-like
34 21 9 0 SCOP 82185 Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
34 34 2 1 SCOP 52279 Beta-D-glucan exohydrolase, C-terminal domain
34 34 10 1 SCOP 101447 Formin homology 2 domain (FH2 domain)
34 34 6 1 SCOP 52025 PA domain
33 30 7 1 SCOP 51230 Single hybrid motif
33 33 6 1 SCOP 47661 t-snare proteins
32 32 11 1 SCOP 88723 PIN domain-like
32 32 4 2 SCOP 52151 FabD/lysophospholipase-like
32 29 8 2 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
32 28 8 1 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
32 31 5 1 SCOP 49870 Osmotin, thaumatin-like protein
32 30 6 0 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
32 28 6 0 SCOP 55666 Ribonuclease PH domain 2-like
31 31 9 2 SCOP 56104 SAICAR synthase-like
31 31 3 0 SCOP 117856 AF0104/ALDC/Ptd012-like
31 31 7 0 SCOP 57863 ArfGap/RecO-like zinc finger
31 27 10 0 SCOP 57889 Cysteine-rich domain
30 30 4 0 SCOP 88946 Sigma2 domain of RNA polymerase sigma factors
30 30 5 1 SCOP 55060 GHMP Kinase, C-terminal domain
29 29 7 0 SCOP 111331 NAD kinase/diacylglycerol kinase-like
29 29 9 2 SCOP 55315 L30e-like
29 29 1 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
29 27 8 0 SCOP 57783 Zinc beta-ribbon
29 18 2 1 SCOP 55945 TATA-box binding protein-like
29 29 1 0 SCOP 57095 Scorpion toxin-like
28 28 5 2 SCOP 102114 Radical SAM enzymes
28 27 8 1 SCOP 56399 ADP-ribosylation
28 28 8 2 SCOP 55931 Glutamine synthetase/guanido kinase
28 28 11 1 SCOP 52954 Class II aaRS ABD-related
28 18 12 0 SCOP 69065 RNase III domain-like
28 28 5 1 SCOP 48173 Cryptochrome/photolyase FAD-binding domain
28 26 7 1 SCOP 52777 CoA-dependent acyltransferases
28 24 11 1 SCOP 52440 PreATP-grasp domain
27 27 9 0 SCOP 103657 BAR/IMD domain-like
27 27 5 3 SCOP 48150 DNA-glycosylase
27 27 8 3 SCOP 56672 DNA/RNA polymerases
27 27 4 2 SCOP 54518 Tubby C-terminal domain-like
27 27 3 1 SCOP 49363 Purple acid phosphatase, N-terminal domain
27 27 1 1 SCOP 56327 LDH C-terminal domain-like
27 10 2 0 SCOP 47762 PAH2 domain
26 26 10 1 SCOP 55920 Creatinase/aminopeptidase
26 26 2 1 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
26 25 7 3 SCOP 52821 Rhodanese/Cell cycle control phosphatase
26 26 4 2 SCOP 52768 Arginase/deacetylase
26 26 4 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
26 26 7 0 SCOP 101898 NHL repeat
26 26 10 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
25 23 7 3 SCOP 51161 Trimeric LpxA-like enzymes
25 25 4 1 SCOP 52425 Cryptochrome/photolyase, N-terminal domain
25 20 13 1 SCOP 47592 SWIB/MDM2 domain
25 25 8 0 SCOP 47384 Homodimeric domain of signal transducing histidine kinase
25 25 12 0 SCOP 68906 SAP domain
25 25 1 1 SCOP 49590 PHL pollen allergen
25 21 4 1 SCOP 47862 Saposin
24 24 4 0 SCOP 57829 Zn-binding ribosomal proteins
24 24 6 0 SCOP 55174 Alpha-L RNA-binding motif
24 24 3 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
24 24 6 1 SCOP 88713 Glycoside hydrolase/deacetylase
24 14 3 1 SCOP 54909 Dimeric alpha+beta barrel
24 24 7 4 SCOP 52467 DHS-like NAD/FAD-binding domain
24 24 3 2 SCOP 52922 TK C-terminal domain-like
24 24 6 1 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
24 24 7 1 SCOP 75632 Cullin homology domain
24 24 7 0 SCOP 55277 GYF domain
24 24 4 1 SCOP 103612 SBT domain
23 23 3 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
23 23 9 1 SCOP 55856 Cytochrome b5-like heme/steroid binding domain
23 23 8 1 SCOP 47576 Calponin-homology domain, CH-domain
23 23 1 1 SCOP 55724 Mog1p/PsbP-like
23 23 5 0 SCOP 50800 PK beta-barrel domain-like
23 23 9 0 SCOP 49354 PapD-like
23 15 8 1 SCOP 158702 Sec63 N-terminal domain-like
22 22 7 2 SCOP 75217 alpha/beta knot
22 18 4 0 SCOP 54403 Cystatin/monellin
22 22 5 0 SCOP 88688 Families 57/38 glycoside transferase middle domain
22 18 3 0 SCOP 143791 DUSP-like
22 11 2 1 SCOP 54416 Amine oxidase N-terminal region
21 21 3 1 SCOP 75304 Amidase signature (AS) enzymes
21 21 4 1 SCOP 50475 FMN-binding split barrel
21 21 4 0 SCOP 63829 Calcium-dependent phosphotriesterase
21 21 7 1 SCOP 50022 ISP domain
21 21 4 1 SCOP 81340 Clc chloride channel
21 20 7 0 SCOP 161111 Cation efflux protein transmembrane domain-like
21 19 6 1 SCOP 51338 Composite domain of metallo-dependent hydrolases
21 21 2 1 SCOP 55895 Ribonuclease Rh-like
21 20 8 0 SCOP 54106 LysM domain
21 21 7 0 SCOP 144232 HIT/MYND zinc finger-like
21 21 6 1 SCOP 49723 Lipase/lipooxygenase domain (PLAT/LH2 domain)
21 21 7 1 SCOP 56204 Hect, E3 ligase catalytic domain
21 21 4 1 SCOP 49447 Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
20 20 2 1 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
20 20 4 2 SCOP 47240 Ferritin-like
20 20 4 1 SCOP 54292 2Fe-2S ferredoxin-like
20 20 4 1 SCOP 48256 Citrate synthase
20 20 12 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
20 20 1 1 SCOP 102198 Putative cyclase
20 20 2 0 SCOP 117892 Band 7/SPFH domain
20 20 5 1 SCOP 55031 Bacterial exopeptidase dimerisation domain
20 20 4 0 SCOP 47676 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
20 8 4 0 SCOP 49303 beta-Galactosidase/glucuronidase domain
20 20 2 1 SCOP 63887 P-domain of calnexin/calreticulin
19 19 5 0 SCOP 47336 ACP-like
19 19 8 1 SCOP 54862 4Fe-4S ferredoxins
19 19 8 1 SCOP 47819 HRDC-like
19 12 4 0 SCOP 57933 TAZ domain
18 18 3 1 SCOP 75620 Release factor
18 11 3 0 SCOP 81333 F1F0 ATP synthase subunit C
18 18 3 0 SCOP 53649 Alkaline phosphatase-like
18 18 5 1 SCOP 56317 Carbon-nitrogen hydrolase
18 10 4 1 SCOP 69645 Arp2/3 complex subunits
18 18 3 1 SCOP 102405 MCP/YpsA-like
18 18 3 0 SCOP 102712 JAB1/MPN domain
18 9 2 0 SCOP 46955 Putative DNA-binding domain
18 18 7 2 SCOP 56645 Acyl-CoA dehydrogenase NM domain-like
18 18 3 1 SCOP 89124 Nop domain
18 18 8 0 SCOP 81923 Double Clp-N motif
18 18 11 0 SCOP 81995 beta-sandwich domain of Sec23/24
18 18 3 1 SCOP 52210 Succinyl-CoA synthetase domains
18 18 5 1 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
18 18 3 1 SCOP 101233 PWI domain
18 18 2 1 SCOP 141562 At5g01610-like
17 17 3 1 SCOP 56808 Ribosomal protein L1
17 15 6 2 SCOP 54197 HIT-like
17 17 1 1 SCOP 47226 Histidine-containing phosphotransfer domain, HPT domain
17 17 3 2 SCOP 51604 Enolase C-terminal domain-like
17 14 8 2 SCOP 47203 Acyl-CoA dehydrogenase C-terminal domain-like
17 17 4 0 SCOP 160443 SMR domain-like
17 17 5 1 SCOP 48019 post-AAA+ oligomerization domain-like
17 17 2 0 SCOP 52935 PK C-terminal domain-like
17 17 3 1 SCOP 54826 Enolase N-terminal domain-like
17 17 3 0 SCOP 48350 GTPase activation domain, GAP
17 17 4 0 SCOP 158639 ENT-like
17 17 2 0 SCOP 54529 Mitochondrial glycoprotein MAM33-like
17 17 2 0 SCOP 103243 KA1-like
17 17 2 1 SCOP 81822 RuBisCo LSMT C-terminal, substrate-binding domain
16 15 6 2 SCOP 53927 Cytidine deaminase-like
16 16 5 1 SCOP 50715 Ribosomal protein L25-like
16 16 3 2 SCOP 51419 PLP-binding barrel
16 16 6 0 SCOP 47027 Acyl-CoA binding protein
16 16 4 0 SCOP 141571 Pentapeptide repeat-like
16 16 2 1 SCOP 55797 PR-1-like
16 15 4 2 SCOP 50814 Lipocalins
16 16 8 1 SCOP 55186 ThrRS/AlaRS common domain
16 16 6 0 SCOP 52075 Outer arm dynein light chain 1
16 16 6 0 SCOP 47769 SAM/Pointed domain
16 13 5 0 SCOP 140383 BSD domain-like
15 15 4 2 SCOP 53697 SIS domain
15 15 7 2 SCOP 52218 Flavoproteins
15 15 3 1 SCOP 53748 Phosphoglycerate kinase
15 13 7 1 SCOP 52949 Macro domain-like
15 15 6 2 SCOP 51246 Rudiment single hybrid motif
15 5 1 1 SCOP 55973 S-adenosylmethionine synthetase
15 15 9 0 SCOP 48334 DNA repair protein MutS, domain III
15 10 3 1 SCOP 56053 Ribosomal protein L6
14 14 1 1 SCOP 56047 Ribosomal protein S8
14 14 3 1 SCOP 53784 Phosphofructokinase
14 14 3 1 SCOP 49329 Cu,Zn superoxide dismutase-like
14 14 5 0 SCOP 161219 CHY zinc finger-like
14 14 2 1 SCOP 51069 Carbonic anhydrase
14 14 3 0 SCOP 103256 Hypothetical protein TM0160
14 14 6 0 SCOP 55154 CYTH-like phosphatases
14 12 4 1 SCOP 117070 LEA14-like
14 14 3 1 SCOP 82704 AlbA-like
14 14 2 1 SCOP 55103 FAD-linked oxidases, C-terminal domain
14 14 6 0 SCOP 50370 Ricin B-like lectins
14 14 1 1 SCOP 47874 Annexin
14 14 5 0 SCOP 57196 EGF/Laminin
14 14 1 0 SCOP 110004 Glycolipid transfer protein, GLTP
14 14 5 0 SCOP 161245 Zinc hairpin stack
14 14 7 0 SCOP 82919 Zn-finger domain of Sec23/24
13 13 4 0 SCOP 54843 Ribosomal protein L22
13 13 4 1 SCOP 52080 Ribosomal proteins L15p and L18e
13 13 2 1 SCOP 103491 Preprotein translocase SecY subunit
13 13 2 1 SCOP 82549 DAK1/DegV-like
13 13 3 1 SCOP 64005 Undecaprenyl diphosphate synthase
13 10 2 1 SCOP 56815 Sec1/munc18-like (SM) proteins
13 13 3 0 SCOP 46579 Prefoldin
13 13 2 0 SCOP 51306 LexA/Signal peptidase
13 13 3 0 SCOP 50044 SH3-domain
13 13 4 0 SCOP 58113 Apolipoprotein A-I
13 13 2 0 SCOP 52091 SpoIIaa-like
13 13 2 1 SCOP 48484 Lipoxigenase
13 11 7 2 SCOP 53955 Lysozyme-like
13 13 2 1 SCOP 101473 DhaL-like
13 10 4 0 SCOP 55136 Probable bacterial effector-binding domain
13 13 3 0 SCOP 47090 PGBD-like
13 13 3 1 SCOP 48056 Di-copper centre-containing domain
13 13 3 0 SCOP 144083 Magnesium transport protein CorA, transmembrane region
13 12 2 1 SCOP 118310 AN1-like Zinc finger
13 13 6 0 SCOP 46774 ARID-like
13 13 4 0 SCOP 54368 Glutamine synthetase, N-terminal domain
13 13 4 0 SCOP 110942 HSP90 C-terminal domain
12 12 3 2 SCOP 48557 L-aspartase-like
12 12 4 2 SCOP 46626 Cytochrome c
12 7 3 2 SCOP 54506 Diaminopimelate epimerase-like
12 12 2 0 SCOP 47072 Cysteine alpha-hairpin motif
12 8 3 0 SCOP 56601 beta-lactamase/transpeptidase-like
12 12 3 1 SCOP 50692 ADC-like
12 12 2 1 SCOP 54626 Chalcone isomerase
12 12 4 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
12 7 2 0 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
12 12 4 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
12 12 5 0 SCOP 100966 Translation initiation factor 2 beta, aIF2beta, N-terminal domain
12 12 6 1 SCOP 81837 BEACH domain
12 12 6 1 SCOP 48425 Sec7 domain
12 12 2 1 SCOP 88798 N-terminal, heterodimerisation domain of RBP7 (RpoE)
12 12 3 1 SCOP 54585 Cdc48 domain 2-like
12 12 5 1 SCOP 81811 Helical domain of Sec23/24
11 11 2 1 SCOP 55282 RL5-like
11 11 4 1 SCOP 53597 Dihydrofolate reductase-like
11 11 3 1 SCOP 56322 ADC synthase
11 11 3 1 SCOP 53800 Chelatase
11 7 3 2 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
11 11 4 1 SCOP 101112 Oxygen-evolving enhancer protein 3,
11 11 7 0 SCOP 69322 Tricorn protease domain 2
11 11 1 1 SCOP 56574 Serpins
11 11 5 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
11 11 3 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
11 11 4 1 SCOP 48225 Seven-hairpin glycosidases
11 10 5 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
11 11 2 1 SCOP 49998 Amine oxidase catalytic domain
11 11 4 0 SCOP 75689 Zinc-binding domain of translation initiation factor 2 beta
11 11 6 1 SCOP 81271 TGS-like
11 11 3 1 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
11 11 4 0 SCOP 140111 Endosomal sorting complex assembly domain
11 11 4 0 SCOP 109715 DEK C-terminal domain
11 7 4 1 SCOP 81886 Helical scaffold and wing domains of SecA
11 11 8 0 SCOP 159042 Plus3-like
10 9 4 0 SCOP 46946 S13-like H2TH domain
10 10 3 1 SCOP 52161 Ribosomal protein L13
10 10 2 1 SCOP 51351 Triosephosphate isomerase (TIM)
10 10 1 2 SCOP 51316 Mss4-like
10 10 3 0 SCOP 46561 Ribosomal protein L29 (L29p)
10 10 2 0 SCOP 144000 Oxysterol-binding protein-like
10 10 2 1 SCOP 49777 PEBP-like
10 10 2 1 SCOP 56529 FAH
10 10 3 0 SCOP 64268 PX domain
10 10 3 1 SCOP 50993 Peptidase/esterase 'gauge' domain
10 10 3 1 SCOP 110069 ApaG-like
10 10 3 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
10 10 3 0 SCOP 57802 Rubredoxin-like
10 10 2 0 SCOP 160104 Acetoacetate decarboxylase-like
10 10 2 1 SCOP 82114 Riboflavin kinase-like
10 7 2 1 SCOP 56014 Nitrite and sulphite reductase 4Fe-4S domain-like
10 10 4 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
10 10 4 1 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
10 10 3 0 SCOP 57184 Growth factor receptor domain
10 10 4 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
10 10 3 0 SCOP 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
10 10 6 1 SCOP 81767 Pre-protein crosslinking domain of SecA
9 9 2 1 SCOP 53178 Peptidyl-tRNA hydrolase-like
9 9 2 1 SCOP 50324 Inorganic pyrophosphatase
9 9 6 1 SCOP 52980 Restriction endonuclease-like
9 9 1 1 SCOP 57798 Casein kinase II beta subunit
9 9 3 0 SCOP 54897 Protease propeptides/inhibitors
9 9 1 1 SCOP 118203 Vacuolar ATP synthase subunit C
9 9 2 1 SCOP 82282 Homocysteine S-methyltransferase
9 9 2 1 SCOP 143113 NAP-like
9 9 2 1 SCOP 111352 Ammonium transporter
9 9 3 1 SCOP 54447 ssDNA-binding transcriptional regulator domain
9 9 4 0 SCOP 50952 Soluble quinoprotein glucose dehydrogenase
9 9 3 1 SCOP 48600 Chorismate mutase II
9 8 2 1 SCOP 110581 Indigoidine synthase A-like
9 9 4 1 SCOP 100939 SPOC domain-like
9 9 5 0 SCOP 46589 tRNA-binding arm
9 9 5 0 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
9 9 5 1 SCOP 53623 MurD-like peptide ligases, catalytic domain
9 9 2 1 SCOP 57247 Bowman-Birk inhibitor, BBI
9 9 6 0 SCOP 55271 DNA repair protein MutS, domain I
9 9 3 1 SCOP 82754 C-terminal, gelsolin-like domain of Sec23/24
9 9 7 0 SCOP 75553 Smc hinge domain
9 9 3 1 SCOP 82215 C-terminal autoproteolytic domain of nucleoporin nup98
9 9 4 0 SCOP 55003 PAP/Archaeal CCA-adding enzyme, C-terminal domain
8 8 2 1 SCOP 47973 Ribosomal protein S7
8 8 4 0 SCOP 110324 Ribosomal L27 protein-like
8 8 2 0 SCOP 160369 Ribosomal protein L10-like
8 8 4 1 SCOP 55068 Peptide methionine sulfoxide reductase
8 8 2 1 SCOP 51730 FAD-linked oxidoreductase
8 8 4 2 SCOP 55821 YrdC/RibB
8 8 2 0 SCOP 89360 HesB-like domain
8 8 2 1 SCOP 56276 S-adenosylmethionine decarboxylase
8 8 3 1 SCOP 52313 Ribosomal protein S2
8 8 1 0 SCOP 52042 Ribosomal protein L32e
8 8 2 1 SCOP 55144 LigT-like
8 8 2 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
8 8 2 0 SCOP 47694 Cytochrome c oxidase subunit h
8 8 2 2 SCOP 54913 GlnB-like
8 8 5 1 SCOP 103025 Folate-binding domain
8 8 3 1 SCOP 69336 Alpha subunit of glutamate synthase, C-terminal domain
8 8 4 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
8 8 3 0 SCOP 81891 Poly A polymerase C-terminal region-like
8 8 6 0 SCOP 101576 Supernatant protein factor (SPF), C-terminal domain
8 8 2 0 SCOP 48340 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
8 8 3 0 SCOP 57277 Granulin repeat
8 8 3 0 SCOP 101821 Aminopeptidase/glucanase lid domain
7 7 2 0 SCOP 53167 Purine and uridine phosphorylases
7 7 2 1 SCOP 54999 Ribosomal protein S10
7 7 4 2 SCOP 54686 Ribosomal protein L16p/L10e
7 7 2 1 SCOP 55831 Thymidylate synthase/dCMP hydroxymethylase
7 7 3 0 SCOP 101908 Putative isomerase YbhE
7 4 2 1 SCOP 55298 YjgF-like
7 7 2 0 SCOP 55129 Ribosomal protein L30p/L7e
7 7 2 0 SCOP 144217 CSL zinc finger
7 7 3 1 SCOP 48613 Heme oxygenase-like
7 7 1 0 SCOP 141678 MAL13P1.257-like
7 6 2 1 SCOP 53590 Nucleoside hydrolase
7 7 4 1 SCOP 53328 Formyltransferase
7 7 2 1 SCOP 56019 The spindle assembly checkpoint protein mad2
7 5 2 0 SCOP 53032 tRNA-intron endonuclease catalytic domain-like
7 7 2 0 SCOP 55257 RBP11-like subunits of RNA polymerase
7 7 4 1 SCOP 55159 eIF1-like
7 7 1 1 SCOP 55770 Profilin (actin-binding protein)
7 7 2 0 SCOP 69618 HemD-like
7 7 3 0 SCOP 49478 Cna protein B-type domain
7 7 5 1 SCOP 52016 LeuD/IlvD-like
7 7 2 0 SCOP 54736 ClpS-like
7 7 2 0 SCOP 143456 VC0467-like
7 6 6 0 SCOP 47781 RuvA domain 2-like
7 7 3 0 SCOP 53092 Creatinase/prolidase N-terminal domain
7 7 1 0 SCOP 54654 CI-2 family of serine protease inhibitors
7 7 4 1 SCOP 52418 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
7 7 2 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
7 7 1 1 SCOP 50621 Alanine racemase C-terminal domain-like
7 5 5 1 SCOP 51101 Mannose-binding lectins
7 7 4 1 SCOP 49348 Clathrin adaptor appendage domain
7 7 4 0 SCOP 82708 R3H domain
7 7 2 1 SCOP 55481 N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
7 7 2 0 SCOP 144074 E2F-DP heterodimerization region
7 7 4 0 SCOP 63491 BAG domain
7 7 2 0 SCOP 50911 Mannose 6-phosphate receptor domain
7 7 4 0 SCOP 57016 Plant lectins/antimicrobial peptides
7 6 2 0 SCOP 47040 Kix domain of CBP (creb binding protein)
7 7 2 1 SCOP 69340 C-terminal domain of adenylylcyclase associated protein
7 7 1 0 SCOP 81496 Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
7 7 5 0 SCOP 54364 Translation initiation factor IF3, N-terminal domain
6 6 1 0 SCOP 56731 DNA primase core
6 6 2 1 SCOP 52141 Uracil-DNA glycosylase-like
6 6 2 1 SCOP 54570 Ribosomal protein S19
6 6 2 1 SCOP 50193 Ribosomal protein L14
6 3 1 0 SCOP 56214 4'-phosphopantetheinyl transferase
6 6 1 1 SCOP 51658 Xylose isomerase-like
6 6 4 1 SCOP 82649 SufE/NifU
6 6 2 0 SCOP 89623 Ribose/Galactose isomerase RpiB/AlsB
6 6 2 0 SCOP 47060 S15/NS1 RNA-binding domain
6 6 3 1 SCOP 55205 EPT/RTPC-like
6 6 3 0 SCOP 54995 Ribosomal protein S6
6 6 1 0 SCOP 144122 Tim10-like
6 6 1 0 SCOP 54575 Ribosomal protein L31e
6 6 2 1 SCOP 54648 DLC
6 6 1 0 SCOP 63393 RNA polymerase subunits
6 6 1 1 SCOP 64153 YjeF N-terminal domain-like
6 6 1 1 SCOP 55239 RuBisCO, small subunit
6 6 1 0 SCOP 53807 "Helical backbone" metal receptor
6 6 3 1 SCOP 56524 Oxidoreductase molybdopterin-binding domain
6 6 2 0 SCOP 89550 PHP domain-like
6 6 3 1 SCOP 53732 Aconitase iron-sulfur domain
6 6 4 0 SCOP 55200 Translation initiation factor IF3, C-terminal domain
6 6 5 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
6 6 2 0 SCOP 142338 CofD-like
6 6 2 1 SCOP 74784 Translin
6 6 2 1 SCOP 56003 Molybdenum cofactor-binding domain
6 5 3 1 SCOP 55979 DNA clamp
6 6 2 1 SCOP 48537 Phospholipase C/P1 nuclease
6 6 2 0 SCOP 54821 Ribosomal protein S3 C-terminal domain
6 4 3 1 SCOP 51971 Nucleotide-binding domain
6 6 4 0 SCOP 49464 Carboxypeptidase regulatory domain-like
6 6 3 0 SCOP 75704 Mitotic arrest deficient-like 1, Mad1
6 6 2 1 SCOP 54665 CO dehydrogenase molybdoprotein N-domain-like
6 6 2 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
6 6 2 1 SCOP 55447 CO dehydrogenase flavoprotein C-terminal domain-like
6 6 2 0 SCOP 110836 Hypothetical protein SAV1430
6 6 2 0 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
6 6 2 1 SCOP 47741 CO dehydrogenase ISP C-domain like
6 4 2 0 SCOP 55116 Formiminotransferase domain of formiminotransferase-cyclodeaminase.
6 3 1 1 SCOP 55124 Nitrite/Sulfite reductase N-terminal domain-like
6 6 1 0 SCOP 55545 beta-N-acetylhexosaminidase-like domain
6 6 5 1 SCOP 55957 Phosphoglucomutase, C-terminal domain
6 6 2 0 SCOP 57845 B-box zinc-binding domain
6 6 3 0 SCOP 47396 Transcription factor IIA (TFIIA), alpha-helical domain
6 6 3 0 SCOP 158573 GINS helical bundle-like
6 6 3 0 SCOP 47895 Transducin (alpha subunit), insertion domain
6 6 3 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
6 6 2 0 SCOP 47050 VHP, Villin headpiece domain
6 6 1 1 SCOP 64158 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
6 6 3 0 SCOP 143503 PUG domain-like
6 6 1 0 SCOP 49758 Calpain large subunit, middle domain (domain III)
6 6 3 0 SCOP 64586 C-terminal domain of ProRS
6 6 1 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
6 6 2 0 SCOP 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain
6 6 3 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
6 6 3 0 SCOP 53150 DNA repair protein MutS, domain II
5 5 2 0 SCOP 48013 NusB-like
5 5 3 1 SCOP 53790 Tetrapyrrole methylase
5 5 2 1 SCOP 64263 Prokaryotic ribosomal protein L17
5 5 3 0 SCOP 82657 BolA-like
5 5 1 0 SCOP 48140 Ribosomal protein L19 (L19e)
5 5 1 0 SCOP 54762 Signal recognition particle alu RNA binding heterodimer, SRP9/14
5 5 1 1 SCOP 102886 Coproporphyrinogen III oxidase
5 5 2 1 SCOP 56634 Heme-dependent catalase-like
5 5 2 0 SCOP 140718 Mediator hinge subcomplex-like
5 5 3 1 SCOP 48439 Protein prenylyltransferase
5 5 1 0 SCOP 103486 V-type ATP synthase subunit C
5 5 1 1 SCOP 55418 eIF4e-like
5 5 1 2 SCOP 55909 Pentein
5 5 2 0 SCOP 89095 GatB/YqeY motif
5 5 1 0 SCOP 49472 Transthyretin (synonym: prealbumin)
5 5 1 1 SCOP 158694 UraD-Like
5 5 3 1 SCOP 52335 Methylglyoxal synthase-like
5 5 1 0 SCOP 75011 3-carboxy-cis,cis-mucoante lactonizing enzyme
5 5 1 0 SCOP 50939 Sialidases
5 5 1 0 SCOP 48695 Multiheme cytochromes
5 5 4 1 SCOP 46548 alpha-helical ferredoxin
5 5 1 0 SCOP 55287 RPB5-like RNA polymerase subunit
5 5 1 1 SCOP 102462 Peptidyl-tRNA hydrolase II
5 5 2 1 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
5 5 2 0 SCOP 69318 Integrin alpha N-terminal domain
5 4 3 0 SCOP 50405 Actin-crosslinking proteins
5 5 3 1 SCOP 142921 WGR domain-like
5 5 1 0 SCOP 49265 Fibronectin type III
5 5 2 0 SCOP 160059 PriA/YqbF domain
5 5 2 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
5 5 3 0 SCOP 116726 TrkA C-terminal domain-like
5 3 3 1 SCOP 56042 PurM C-terminal domain-like
5 5 1 0 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
5 5 1 0 SCOP 46600 C-terminal UvrC-binding domain of UvrB
5 4 4 1 SCOP 55326 PurM N-terminal domain-like
5 5 4 1 SCOP 47446 Signal peptide-binding domain
5 5 1 0 SCOP 54991 Anticodon-binding domain of PheRS
5 5 1 1 SCOP 118359 Expressed protein At2g23090/F21P24.15
5 4 3 0 SCOP 55394 Bactericidal permeability-increasing protein, BPI
5 5 2 1 SCOP 63570 PABC (PABP) domain
5 5 1 0 SCOP 116846 MIT domain
5 5 2 0 SCOP 57414 Hairpin loop containing domain-like
5 3 3 1 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
5 5 5 1 SCOP 117018 ATP-dependent DNA ligase DNA-binding domain
5 5 1 1 SCOP 89942 eEF1-gamma domain
5 5 2 0 SCOP 50784 Transcription factor IIA (TFIIA), beta-barrel domain
5 5 1 0 SCOP 53036 Eukaryotic RPB5 N-terminal domain
5 5 3 0 SCOP 46942 Elongation factor TFIIS domain 2
5 5 2 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
5 5 2 0 SCOP 101420 C-terminal domain of Ku80
5 5 1 1 SCOP 160897 Taf5 N-terminal domain-like
5 5 2 0 SCOP 160219 AMPKBI-like
5 5 1 1 SCOP 116768 DNA-binding domain of EIN3-like
5 5 2 0 SCOP 47055 TAF(II)230 TBP-binding fragment
5 5 3 1 SCOP 47587 Domain of poly(ADP-ribose) polymerase
5 5 2 0 SCOP 101238 XPC-binding domain
4 4 2 1 SCOP 52166 Ribosomal protein L4
4 4 1 0 SCOP 141091 L21p-like
4 4 3 0 SCOP 143800 L28p-like
4 4 1 1 SCOP 55194 Ribosome recycling factor, RRF
4 4 2 1 SCOP 103263 Chorismate synthase, AroC
4 4 2 1 SCOP 51283 dUTPase-like
4 4 2 1 SCOP 51713 tRNA-guanine transglycosylase
4 4 1 1 SCOP 52121 Lumazine synthase
4 4 1 0 SCOP 110296 Oligoxyloglucan reducing end-specific cellobiohydrolase
4 4 1 0 SCOP 52499 Isochorismatase-like hydrolases
4 4 1 0 SCOP 53639 AraD/HMP-PK domain-like
4 4 2 2 SCOP 52972 ITPase-like
4 4 2 1 SCOP 111126 Ligand-binding domain in the NO signalling and Golgi transport
4 3 2 1 SCOP 63562 RPB6/omega subunit-like
4 4 1 0 SCOP 161084 MAPEG domain-like
4 4 2 1 SCOP 51717 Dihydropteroate synthetase-like
4 4 2 1 SCOP 53795 PEP carboxykinase-like
4 4 2 0 SCOP 55718 SCP-like
4 4 1 1 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
4 4 2 0 SCOP 47413 lambda repressor-like DNA-binding domains
4 4 2 0 SCOP 55083 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
4 4 2 1 SCOP 64167 SurE-like
4 4 2 0 SCOP 110857 Gamma-glutamyl cyclotransferase-like
4 4 1 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
4 2 1 1 SCOP 53218 Molybdenum cofactor biosynthesis proteins
4 4 2 0 SCOP 109910 YgfY-like
4 4 2 1 SCOP 50486 FMT C-terminal domain-like
4 4 3 0 SCOP 141130 Acetamidase/Formamidase-like
4 4 2 1 SCOP 56726 DNA topoisomerase IV, alpha subunit
4 4 2 1 SCOP 54984 eEF-1beta-like
4 4 2 0 SCOP 52200 Toll/Interleukin receptor TIR domain
4 4 2 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
4 4 3 0 SCOP 63825 YWTD domain
4 4 3 1 SCOP 56719 Type II DNA topoisomerase
4 4 2 1 SCOP 68923 PEP carboxykinase N-terminal domain
4 4 1 0 SCOP 142984 Nqo1 middle domain-like
4 4 2 1 SCOP 53920 Fe-only hydrogenase
4 4 2 0 SCOP 90002 Hypothetical protein YjiA, C-terminal domain
4 4 2 0 SCOP 63418 MurE/MurF N-terminal domain
4 4 3 0 SCOP 117289 Nucleoporin domain
4 4 2 0 SCOP 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
4 4 1 0 SCOP 140490 Nqo1C-terminal domain-like
4 4 3 0 SCOP 102735 Trigger factor ribosome-binding domain
4 4 1 1 SCOP 101152 Mob1/phocein
4 4 1 1 SCOP 89817 Mago nashi protein
4 4 2 1 SCOP 69000 FAD-dependent thiol oxidase
4 4 1 0 SCOP 47672 Transferrin receptor-like dimerisation domain
4 4 2 0 SCOP 81531 Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
4 4 1 1 SCOP 142019 Nqo1 FMN-binding domain-like
4 4 1 0 SCOP 50386 STI-like
4 4 2 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
4 4 3 0 SCOP 50916 Rap30/74 interaction domains
4 4 3 0 SCOP 55711 Subdomain of clathrin and coatomer appendage domain
4 4 2 0 SCOP 140612 EB1 dimerisation domain-like
4 4 1 1 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
4 4 1 0 SCOP 63433 Fumarylacetoacetate hydrolase, FAH, N-terminal domain
4 4 2 0 SCOP 101224 HAND domain of the nucleosome remodeling ATPase ISWI
4 2 1 0 SCOP 50382 Agglutinin
3 3 1 1 SCOP 56420 Peptide deformylase
3 3 2 0 SCOP 109998 Triger factor/SurA peptide-binding domain-like
3 3 2 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
3 3 2 0 SCOP 54565 Ribosomal protein S16
3 3 2 1 SCOP 142695 RibA-like
3 3 1 0 SCOP 103456 Preprotein translocase SecE subunit
3 3 1 0 SCOP 159468 AtpF-like
3 3 1 0 SCOP 55248 PCD-like
3 3 1 2 SCOP 90096 Subunits of heterodimeric actin filament capping protein Capz
3 3 1 1 SCOP 53056 beta-carbonic anhydrase, cab
3 3 1 0 SCOP 46988 Tubulin chaperone cofactor A
3 3 1 0 SCOP 103446 PetG subunit of the cytochrome b6f complex
3 3 1 1 SCOP 81483 Bacterial photosystem II reaction centre, L and M subunits
3 3 1 1 SCOP 161045 Cytochrome b559 subunits
3 3 1 0 SCOP 55331 Tautomerase/MIF
3 3 1 1 SCOP 56266 DmpA/ArgJ-like
3 3 2 0 SCOP 158615 RbcX-like
3 3 1 0 SCOP 101744 Rof/RNase P subunit-like
3 3 2 1 SCOP 56762 HydB/Nqo4-like
3 2 2 1 SCOP 53213 LigB-like
3 3 2 1 SCOP 55826 YbaK/ProRS associated domain
3 3 2 0 SCOP 101386 all-alpha NTP pyrophosphatases
3 3 2 0 SCOP 56821 Prismane protein-like
3 3 2 0 SCOP 69754 Ribosome binding protein Y (YfiA homologue)
3 3 2 0 SCOP 160631 SMI1/KNR4-like
3 2 2 1 SCOP 111321 AF1104-like
3 3 1 0 SCOP 160350 Rnp2-like
3 3 2 0 SCOP 48619 Phospholipase A2, PLA2
3 3 1 0 SCOP 118116 DNA mismatch repair protein MutL
3 3 3 0 SCOP 81336 F1F0 ATP synthase subunit A
3 3 2 0 SCOP 52129 Caspase-like
3 3 2 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
3 3 2 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
3 3 2 1 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
3 3 2 0 SCOP 47648 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
3 3 2 0 SCOP 69075 Glutamyl tRNA-reductase dimerization domain
3 3 1 0 SCOP 47794 Rad51 N-terminal domain-like
3 3 2 0 SCOP 54752 RecA protein, C-terminal domain
3 3 1 0 SCOP 54782 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
3 3 3 0 SCOP 74924 Cap-Gly domain
3 3 2 0 SCOP 116742 eIF2alpha middle domain-like
3 3 1 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
3 3 1 1 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
3 3 1 0 SCOP 48097 Regulator of G-protein signaling, RGS
3 3 3 0 SCOP 103107 Hypothetical protein c14orf129, hspc210
3 3 2 0 SCOP 55261 GAD domain-like
3 3 1 0 SCOP 144292 occludin/ELL-like
3 3 2 0 SCOP 69742 Glutamyl tRNA-reductase catalytic, N-terminal domain
3 3 2 0 SCOP 110993 eIF-2-alpha, C-terminal domain
3 3 1 0 SCOP 160527 V-type ATPase subunit E-like
3 3 2 0 SCOP 54556 Chitinase insertion domain
3 3 2 0 SCOP 82895 TSP-1 type 1 repeat
3 3 1 0 SCOP 159065 Dom34/Pelota N-terminal domain-like
3 3 3 0 SCOP 140996 Hermes dimerisation domain
3 3 1 0 SCOP 69848 LCCL domain
3 3 2 0 SCOP 140586 Dcp2 domain-like
3 3 1 0 SCOP 55653 Ribosomal protein L9 C-domain
3 3 2 0 SCOP 101790 Aminomethyltransferase beta-barrel domain
2 2 1 0 SCOP 46911 Ribosomal protein S18
2 2 1 0 SCOP 82607 YbaB-like
2 2 1 0 SCOP 89919 Ribosome-binding factor A, RbfA
2 2 1 0 SCOP 64182 DHH phosphoesterases
2 2 1 0 SCOP 143034 L35p-like
2 2 1 1 SCOP 74731 Ribosomal protein L20
2 2 1 1 SCOP 54285 MoaD/ThiS
2 2 1 0 SCOP 117991 YbeD/HP0495-like
2 2 1 1 SCOP 56796 Dehydroquinate synthase-like
2 1 1 0 SCOP 55469 FMN-dependent nitroreductase-like
2 2 2 0 SCOP 103464 Oligosaccharyltransferase subunit ost4p
2 2 1 0 SCOP 111278 SSo0622-like
2 2 1 0 SCOP 81411 Mitochondrial cytochrome c oxidase subunit VIa
2 2 2 0 SCOP 48662 Ribosomal protein L39e
2 2 1 0 SCOP 110849 ParB/Sulfiredoxin
2 2 2 0 SCOP 103111 Activator of Hsp90 ATPase, Aha1
2 2 1 0 SCOP 48690 Epsilon subunit of mitochondrial F1F0-ATP synthase
2 2 1 1 SCOP 52788 Phosphotyrosine protein phosphatases I
2 2 2 1 SCOP 101960 Stabilizer of iron transporter SufD
2 2 1 0 SCOP 141734 HisI-like
2 2 1 1 SCOP 46458 Globin-like
2 2 2 0 SCOP 50090 Electron transport accessory proteins
2 2 1 0 SCOP 81540 Subunit VIII of photosystem I reaction centre, PsaI
2 2 1 0 SCOP 161021 Photosystem II reaction center protein J, PsbJ
2 2 1 1 SCOP 101546 ASF1-like
2 2 2 0 SCOP 111038 YjbQ-like
2 2 1 1 SCOP 55040 Molybdenum cofactor biosynthesis protein C, MoaC
2 2 2 0 SCOP 103642 Sec-C motif
2 2 1 1 SCOP 51998 PFL-like glycyl radical enzymes
2 2 2 0 SCOP 82771 GIY-YIG endonuclease
2 2 2 0 SCOP 82697 PurS-like
2 2 1 0 SCOP 54690 Molybdopterin synthase subunit MoaE
2 2 1 0 SCOP 141000 Glu-tRNAGln amidotransferase C subunit
2 2 2 0 SCOP 54111 Urease, gamma-subunit
2 2 2 1 SCOP 51278 Urease, beta-subunit
2 2 1 0 SCOP 110916 Peptidyl-tRNA hydrolase domain-like
2 2 2 0 SCOP 56747 Prim-pol domain
2 2 1 0 SCOP 53182 Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
2 2 1 0 SCOP 69786 YggU-like
2 2 1 0 SCOP 142764 YgbK-like
2 2 1 1 SCOP 89562 RraA-like
2 2 2 0 SCOP 50346 PRC-barrel domain
2 2 1 0 SCOP 143437 THUMP domain-like
2 2 1 0 SCOP 116820 Rps17e-like
2 2 1 0 SCOP 160374 RplX-like
2 2 1 1 SCOP 69695 SRP19
2 2 1 0 SCOP 63867 MoeA C-terminal domain-like
2 2 1 0 SCOP 50960 TolB, C-terminal domain
2 1 1 0 SCOP 89372 Fucose-specific lectin
2 2 1 0 SCOP 141255 YccV-like
2 2 1 1 SCOP 102645 CoaB-like
2 2 1 0 SCOP 90257 Myosin rod fragments
2 2 2 0 SCOP 144206 NOB1 zinc finger-like
2 1 1 0 SCOP 53681 Aspartate/glutamate racemase
2 2 1 0 SCOP 82679 N-utilization substance G protein NusG, N-terminal domain
2 2 1 0 SCOP 63999 Thiamin pyrophosphokinase, catalytic domain
2 2 2 0 SCOP 141673 MOSC N-terminal domain-like
2 2 1 1 SCOP 110019 ERO1-like
2 2 1 1 SCOP 54810 GMP synthetase C-terminal dimerisation domain
2 2 1 1 SCOP 101904 GyrA/ParC C-terminal domain-like
2 2 2 0 SCOP 143548 Serine metabolism enzymes domain
2 2 1 0 SCOP 47144 HSC20 (HSCB), C-terminal oligomerisation domain
2 2 1 0 SCOP 51984 MurCD N-terminal domain
2 2 1 1 SCOP 63882 MoeA N-terminal region -like
2 2 1 0 SCOP 101278 N-terminal domain of adenylylcyclase associated protein, CAP
2 2 1 0 SCOP 141259 CarD-like
2 2 1 0 SCOP 82861 Mechanosensitive channel protein MscS (YggB), transmembrane region
2 2 1 0 SCOP 56973 Aerolisin/ETX pore-forming domain
2 2 1 0 SCOP 75420 YhbC-like, N-terminal domain
2 2 1 0 SCOP 47933 ERP29 C domain-like
2 2 2 0 SCOP 55550 SH2 domain
2 2 1 1 SCOP 141493 Allene oxide cyclase-like
2 2 1 1 SCOP 56542 Substrate-binding domain of HMG-CoA reductase
2 2 1 0 SCOP 110221 AbfB domain
2 2 1 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
2 2 1 1 SCOP 109993 VPS9 domain
2 2 1 1 SCOP 140984 PTPA-like
2 2 1 1 SCOP 69012 alpha-ketoacid dehydrogenase kinase, N-terminal domain
2 2 1 1 SCOP 143875 ERH-like
2 2 1 0 SCOP 111388 Pollen allergen ole e 6
2 2 1 0 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
2 2 1 1 SCOP 50989 Clathrin heavy-chain terminal domain
2 2 1 1 SCOP 47212 FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
2 2 1 0 SCOP 140427 VPS28 C-terminal domain-like
2 2 1 0 SCOP 81872 BRCA2 helical domain
2 2 1 0 SCOP 101931 Pym (Within the bgcn gene intron protein, WIBG), N-terminal domain
2 2 1 0 SCOP 47031 Second domain of FERM
2 2 2 1 SCOP 88802 Pre-PUA domain
2 2 1 0 SCOP 63862 Thiamin pyrophosphokinase, substrate-binding domain
2 2 1 1 SCOP 49441 Cytochrome f, large domain
2 2 1 0 SCOP 103431 Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor
2 2 1 1 SCOP 55035 NAD-binding domain of HMG-CoA reductase
2 2 1 0 SCOP 143517 TRCF domain-like
2 2 1 0 SCOP 102741 Obg GTP-binding protein C-terminal domain
2 2 2 0 SCOP 46915 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
2 2 2 0 SCOP 109736 FGAM synthase PurL, linker domain
2 2 1 0 SCOP 81878 BRCA2 tower domain
2 2 2 0 SCOP 158230 PRP4-like
1 1 1 0 SCOP 142433 CinA-like
1 1 1 0 SCOP 57840 Ribosomal protein L36
1 1 1 1 SCOP 75625 YebC-like
1 1 1 0 SCOP 110009 Hypothetical protein MG354
1 1 1 0 SCOP 46992 Ribosomal protein S20
1 1 1 1 SCOP 69765 IpsF-like
1 1 1 1 SCOP 56770 HydA/Nqo6-like
1 1 1 1 SCOP 81452 Cytochrome c oxidase subunit III-like
1 1 1 1 SCOP 55387 Frataxin/Nqo15-like
1 1 1 0 SCOP 81321 Family A G protein-coupled receptor-like
1 1 1 1 SCOP 69500 DTD-like
1 1 1 0 SCOP 142897 TFB5-like
1 1 1 0 SCOP 81524 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 81514 Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 144210 Nop10-like SnoRNP
1 1 1 0 SCOP 89895 FYSH domain
1 1 1 0 SCOP 69103 Arp2/3 complex 16 kDa subunit ARPC5
1 1 1 0 SCOP 51645 Malate synthase G
1 1 1 0 SCOP 81508 Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 140959 Indolic compounds 2,3-dioxygenase-like
1 1 1 0 SCOP 81343 Fumarate reductase respiratory complex transmembrane subunits
1 1 1 1 SCOP 69060 Arp2/3 complex 21 kDa subunit ARPC3
1 1 1 0 SCOP 143870 PF0523-like
1 1 1 1 SCOP 46924 RNA polymerase subunit RPB10
1 1 1 0 SCOP 143447 AMMECR1-like
1 1 1 1 SCOP 81442 Cytochrome c oxidase subunit I-like
1 1 1 0 SCOP 81342 Transmembrane di-heme cytochromes
1 1 1 1 SCOP 57662 Ferredoxin thioredoxin reductase (FTR), catalytic beta chain
1 1 1 0 SCOP 103451 PetN subunit of the cytochrome b6f complex
1 1 1 0 SCOP 81558 Photosystem I subunits PsaA/PsaB
1 1 1 1 SCOP 64234 Photosystem I subunit PsaD
1 1 1 1 SCOP 81536 Subunit III of photosystem I reaction centre, PsaF
1 1 1 0 SCOP 81544 Subunit IX of photosystem I reaction centre, PsaJ
1 1 1 0 SCOP 81563 Photosystem I reaction center subunit X, PsaK
1 1 1 1 SCOP 81568 Photosystem I reaction center subunit XI, PsaL
1 1 1 1 SCOP 161077 Photosystem II antenna protein-like
1 1 1 0 SCOP 161025 Photosystem II 10 kDa phosphoprotein PsbH
1 1 1 0 SCOP 161041 Photosystem II reaction center protein I, PsbI
1 1 1 0 SCOP 161037 Photosystem II reaction center protein K, PsbK
1 1 1 0 SCOP 161017 Photosystem II reaction center protein L, PsbL
1 1 1 0 SCOP 161029 Photosystem II reaction center protein T, PsbT
1 1 1 0 SCOP 143243 Nqo5-like
1 1 1 0 SCOP 144020 FdhE-like
1 1 1 1 SCOP 118196 YaeB-like
1 1 1 0 SCOP 142754 NadA-like
1 1 1 1 SCOP 56349 DNA breaking-rejoining enzymes
1 1 1 0 SCOP 103441 PetM subunit of the cytochrome b6f complex
1 1 1 1 SCOP 143990 YbiA-like
1 1 1 0 SCOP 159501 EreA/ChaN-like
1 1 1 0 SCOP 140663 TTHA0068-like
1 1 1 1 SCOP 143081 BB1717-like
1 1 1 0 SCOP 54975 Acylphosphatase/BLUF domain-like
1 1 1 0 SCOP 158997 Trm112p-like
1 1 1 1 SCOP 51391 Thiamin phosphate synthase
1 1 1 0 SCOP 51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
1 1 1 0 SCOP 102588 LmbE-like
1 1 1 1 SCOP 160909 ATP12-like
1 1 1 1 SCOP 51219 TRAP-like
1 1 1 0 SCOP 159659 Cgl1923-like
1 1 1 0 SCOP 64076 MTH938-like
1 1 1 1 SCOP 56925 OMPA-like
1 1 1 0 SCOP 50974 Nitrous oxide reductase, N-terminal domain
1 1 1 0 SCOP 158710 PSPTO4464-like
1 1 1 0 SCOP 69349 Phage fibre proteins
1 1 1 1 SCOP 142535 AF0625-like
1 1 1 0 SCOP 143865 CorA soluble domain-like
1 1 1 0 SCOP 158832 Tex N-terminal region-like
1 1 1 0 SCOP 53706 Formate dehydrogenase/DMSO reductase, domains 1-3
1 1 1 0 SCOP 82093 Heme chaperone CcmE
1 1 1 0 SCOP 55608 Homing endonucleases
1 1 1 0 SCOP 49344 CBD9-like
1 1 1 0 SCOP 102110 (2r)-phospho-3-sulfolactate synthase ComA
1 1 1 0 SCOP 55234 Cyanase C-terminal domain
1 1 1 1 SCOP 142877 EndoU-like
1 1 1 1 SCOP 52009 Phosphohistidine domain
1 1 1 0 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
1 1 1 0 SCOP 158745 LanC-like
1 1 1 0 SCOP 56436 C-type lectin-like
1 1 1 0 SCOP 69055 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
1 1 1 0 SCOP 49373 Invasin/intimin cell-adhesion fragments
1 1 1 0 SCOP 58022 XRCC4, C-terminal oligomerization domain
1 1 1 1 SCOP 110111 Ctag/Cox11
1 1 1 0 SCOP 81585 PsbU/PolX domain-like
1 1 1 0 SCOP 117074 Hypothetical protein PA1324
1 1 1 0 SCOP 68912 Rho N-terminal domain-like
1 1 1 1 SCOP 140869 GUN4-like
1 1 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
1 1 1 0 SCOP 110921 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
1 1 1 1 SCOP 55637 Cell cycle regulatory proteins
1 1 1 1 SCOP 143975 IlvD/EDD N-terminal domain-like
1 1 1 0 SCOP 54452 MHC antigen-recognition domain
1 1 1 0 SCOP 48508 Nuclear receptor ligand-binding domain
1 1 1 1 SCOP 82109 MIR domain
1 1 1 0 SCOP 47938 Functional domain of the splicing factor Prp18
1 1 1 0 SCOP 161065 ATP synthase D chain-like
1 1 1 1 SCOP 140102 ISY1 domain-like
1 1 1 0 SCOP 50809 XRCC4, N-terminal domain
1 1 1 0 SCOP 88645 ssDNA viruses
1 1 1 1 SCOP 51649 RuBisCo, C-terminal domain
1 1 1 1 SCOP 109920 Hypothetical protein At3g22680
1 1 1 0 SCOP 102848 NSFL1 (p97 ATPase) cofactor p47, SEP domain
1 1 1 0 SCOP 56194 Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
1 1 1 1 SCOP 56741 Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
1 1 1 0 SCOP 144256 TSP9-like
1 1 1 0 SCOP 81502 ISP transmembrane anchor
1 1 1 0 SCOP 47802 DNA polymerase beta, N-terminal domain-like
1 1 1 0 SCOP 81799 Putative methyltransferase TM0872, insert domain
1 1 1 0 SCOP 109728 Hypothetical protein AF0491, middle domain
1 1 1 0 SCOP 160996 HI0933 insert domain-like
1 1 1 0 SCOP 57770 Methionyl-tRNA synthetase (MetRS), Zn-domain

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The following superfamilies have one or more weak hits:

SCOP superfamily Troponin coil-coiled subunits
SCOP superfamily Neurotransmitter-gated ion-channel transmembrane pore
SCOP superfamily YajQ-like
SCOP superfamily Hypothetical protein VC0424
SCOP superfamily Doublecortin (DC)
SCOP superfamily CoA-transferase family III (CaiB/BaiF)
SCOP superfamily L-sulfolactate dehydrogenase-like
SCOP superfamily Baseplate structural protein gp8
SCOP superfamily Soluble domain of poliovirus core protein 3a
SCOP superfamily Receptor-binding domain of short tail fibre protein gp12
SCOP superfamily Positive stranded ssRNA viruses
SCOP superfamily Tumor suppressor gene product Apc
SCOP superfamily Mechanosensitive channel protein MscS (YggB), C-terminal domain
SCOP superfamily SEA domain
SCOP superfamily Probable GTPase Der, C-terminal domain
SCOP superfamily Polo-box domain
SCOP superfamily GckA/TtuD-like
SCOP superfamily BAH domain
SCOP superfamily N-utilization substance G protein NusG, insert domain
SCOP superfamily Tp47 lipoprotein, middle and C-terminal domains
SCOP superfamily Family 10 polysaccharide lyase
SCOP superfamily Myosin phosphatase inhibitor 17kDa protein, CPI-17
SCOP superfamily Crustacean CHH/MIH/GIH neurohormone
SCOP superfamily beta-catenin-interacting protein ICAT
SCOP superfamily a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
SCOP superfamily F1F0 ATP synthase subunit B, membrane domain
SCOP superfamily Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
SCOP superfamily Cytochrome c oxidase subunit II-like, transmembrane region
SCOP superfamily Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)
SCOP superfamily Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
SCOP superfamily Mitochondrial cytochrome c oxidase subunit VIIa
SCOP superfamily ABC transporter involved in vitamin B12 uptake, BtuC
SCOP superfamily Gated mechanosensitive channel
SCOP superfamily Adenylylcyclase toxin (the edema factor)
SCOP superfamily Rad50 coiled-coil Zn hook
SCOP superfamily Chemotaxis phosphatase CheZ
SCOP superfamily Pheromone-binding domain of LuxR-like quorum-sensing transcription factors
SCOP superfamily Putative transcriptional regulator TM1602, C-terminal domain
SCOP superfamily Dipeptidyl peptidase I (cathepsin C), exclusion domain
SCOP superfamily V-region of surface antigen I/II (SA I/II, PAC)
SCOP superfamily Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha)
SCOP superfamily Lamin A/C globular tail domain
SCOP superfamily C-terminal domain of PLC-beta
SCOP superfamily Eea1 homodimerisation domain
SCOP superfamily Urease metallochaperone UreE, C-terminal domain
SCOP superfamily Cloacin translocation domain
SCOP superfamily Tricorn protease N-terminal domain
SCOP superfamily Nucleoplasmin-like core domain
SCOP superfamily Integrin domains
SCOP superfamily Quinohemoprotein amine dehydrogenase C chain
SCOP superfamily Nuclear receptor coactivator interlocking domain
SCOP superfamily Anti-sigma factor AsiA
SCOP superfamily Hypothetical protein YjbJ
SCOP superfamily Bcr-Abl oncoprotein oligomerization domain
SCOP superfamily RecG, N-terminal domain
SCOP superfamily F1 ATPase inhibitor, IF1, C-terminal domain
SCOP superfamily Intermediate filament protein, coiled coil region
SCOP superfamily Phase 1 flagellin
SCOP superfamily Outer capsid protein sigma 3
SCOP superfamily CNF1/YfiH-like putative cysteine hydrolases
SCOP superfamily Hsp33 domain
SCOP superfamily SirA-like
SCOP superfamily SAND domain-like
SCOP superfamily Nicotinic receptor ligand binding domain-like
SCOP superfamily Frizzled cysteine-rich domain
SCOP superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain
SCOP superfamily Bacterial hemolysins
SCOP superfamily Clostridium neurotoxins, "coiled-coil" domain
SCOP superfamily Variant surface glycoprotein (N-terminal domain)
SCOP superfamily Influenza hemagglutinin (stalk)
SCOP superfamily N-terminal coiled coil domain from apc
SCOP superfamily Outer membrane lipoprotein
SCOP superfamily Delta-sleep-inducing peptide immunoreactive peptide
SCOP superfamily Coiled-coil dimerization domain from cortexillin I
SCOP superfamily Fibrinogen coiled-coil and central regions
SCOP superfamily Chicken cartilage matrix protein
SCOP superfamily Inhibitor of apoptosis (IAP) repeat
SCOP superfamily Ada DNA repair protein, N-terminal domain (N-Ada 10)
SCOP superfamily Metallothionein
SCOP superfamily Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
SCOP superfamily Hypothetical protein MTH1184
SCOP superfamily Zn2/Cys6 DNA-binding domain
SCOP superfamily Type X cellulose binding domain, CBDX
SCOP superfamily Thyroglobulin type-1 domain
SCOP superfamily TNF receptor-like
SCOP superfamily Methylamine dehydrogenase, L chain
SCOP superfamily Blood coagulation inhibitor (disintegrin)
SCOP superfamily Cystine-knot cytokines
SCOP superfamily Trefoil
SCOP superfamily LDL receptor-like module
SCOP superfamily Elafin-like
SCOP superfamily Viral glycoprotein, central and dimerisation domains
SCOP superfamily Perfringolysin
SCOP superfamily Outer membrane efflux proteins (OEP)
SCOP superfamily Porins
SCOP superfamily Bcl-2 inhibitors of programmed cell death
SCOP superfamily Colicin
SCOP superfamily Replication terminator protein (Tus)
SCOP superfamily Nitric oxide (NO) synthase oxygenase domain
SCOP superfamily gp120 core
SCOP superfamily Fibrinogen C-terminal domain-like
SCOP superfamily SRCR-like
SCOP superfamily Nitrile hydratase alpha chain
SCOP superfamily PheT/TilS domain
SCOP superfamily Ornithine decarboxylase C-terminal domain
SCOP superfamily Phoshotransferase/anion transport protein
SCOP superfamily Regulatory factor Nef
SCOP superfamily tRNA-intron endonuclease N-terminal domain-like
SCOP superfamily Hedgehog/DD-peptidase
SCOP superfamily Formylmethanofuran:tetrahydromethanopterin formyltransferase
SCOP superfamily Nucleotide cyclase
SCOP superfamily DNA damage-inducible protein DinI
SCOP superfamily Pili subunits
SCOP superfamily Immunoglobulin-binding domains
SCOP superfamily Superantigen toxins, C-terminal domain
SCOP superfamily Staphylokinase/streptokinase
SCOP superfamily Microbial ribonucleases
SCOP superfamily PTS system IIB component-like
SCOP superfamily Cobalamin (vitamin B12)-dependent enzymes
SCOP superfamily Hedgehog/intein (Hint) domain
SCOP superfamily Insect cysteine-rich antifreeze protein
SCOP superfamily beta-Roll
SCOP superfamily delta-Endotoxin (insectocide), middle domain
SCOP superfamily Outer surface protein
SCOP superfamily Thermostable phytase (3-phytase)
SCOP superfamily D-aminopeptidase, middle and C-terminal domains
SCOP superfamily Cytokine
SCOP superfamily MOP-like
SCOP superfamily N-terminal domains of the minor coat protein g3p
SCOP superfamily DNA-binding domain of retroviral integrase
SCOP superfamily Myosin S1 fragment, N-terminal domain
SCOP superfamily Hyaluronate lyase-like, C-terminal domain
SCOP superfamily TNF-like
SCOP superfamily Group II dsDNA viruses VP
SCOP superfamily PHM/PNGase F
SCOP superfamily Neurophysin II
SCOP superfamily Rab geranylgeranyltransferase alpha-subunit, insert domain
SCOP superfamily Periplasmic chaperone C-domain
SCOP superfamily alpha-Amylase inhibitor tendamistat
SCOP superfamily Bacterial adhesins
SCOP superfamily Carbohydrate-binding domain
SCOP superfamily Superoxide reductase-like
SCOP superfamily Immunoglobulin
SCOP superfamily Moesin tail domain
SCOP superfamily Fe-only hydrogenase smaller subunit
SCOP superfamily Transducin (heterotrimeric G protein), gamma chain
SCOP superfamily FinO-like
SCOP superfamily Tetraspanin
SCOP superfamily gene 59 helicase assembly protein
SCOP superfamily Cytochrome c oxidase subunit E
SCOP superfamily Lipovitellin-phosvitin complex, superhelical domain
SCOP superfamily Ras GEF
SCOP superfamily Chondroitin AC/alginate lyase
SCOP superfamily FliG
SCOP superfamily N-terminal domain of DnaB helicase
SCOP superfamily GntR ligand-binding domain-like
SCOP superfamily DEATH domain
SCOP superfamily Retrovirus capsid protein, N-terminal core domain
SCOP superfamily Wiscott-Aldrich syndrome protein, WASP, C-terminal domain
SCOP superfamily Bacteriocin AS-48
SCOP superfamily Apolipophorin-III
SCOP superfamily Retroviral matrix proteins
SCOP superfamily C-terminal domain of RNA polymerase alpha subunit
SCOP superfamily Anaphylotoxins (complement system)
SCOP superfamily STAT
SCOP superfamily Methionine synthase domain
SCOP superfamily Ribbon-helix-helix
SCOP superfamily Insect pheromone/odorant-binding proteins
SCOP superfamily Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
SCOP superfamily 4-helical cytokines
SCOP superfamily Proteasome activator
SCOP superfamily TMV-like viral coat proteins
SCOP superfamily Apolipoprotein
SCOP superfamily Methane monooxygenase hydrolase, gamma subunit
SCOP superfamily Diol dehydratase, gamma subunit
SCOP superfamily T4 endonuclease V
SCOP superfamily Spectrin repeat
SCOP superfamily Epsilon subunit of F1F0-ATP synthase C-terminal domain
SCOP superfamily HR1 repeat
SCOP superfamily PspA lactotransferrin-binding region
SCOP superfamily Gam-like
SCOP superfamily RILP dimerisation region
SCOP superfamily T-antigen specific domain-like
SCOP superfamily E6 C-terminal domain-like
SCOP superfamily YfgJ-like
SCOP superfamily MetI-like
SCOP superfamily SNF-like
SCOP superfamily ATP synthase B chain-like
SCOP superfamily PsbZ-like
SCOP superfamily Photosystem II reaction center protein M, PsbM
SCOP superfamily Viral glycoprotein ectodomain-like
SCOP superfamily flu NP-like
SCOP superfamily SSO1389-like
SCOP superfamily AF1531-like
SCOP superfamily PH0156-like
SCOP superfamily PG1388-like
SCOP superfamily Rv2827c C-terminal domain-like
SCOP superfamily FLJ32549 C-terminal domain-like
SCOP superfamily BRK domain-like
SCOP superfamily BLRF2-like
SCOP superfamily PG1857-like
SCOP superfamily NosL/MerB-like
SCOP superfamily Bacterial polysaccharide co-polymerase-like
SCOP superfamily NRDP1 C-terminal domain-like
SCOP superfamily YdhG-like
SCOP superfamily XkdW-like
SCOP superfamily TBP-interacting protein-like
SCOP superfamily AttH-like
SCOP superfamily SO1590-like
SCOP superfamily YkvR-like
SCOP superfamily HupF/HypC-like
SCOP superfamily Lipase chaperone-like
SCOP superfamily AGR C 984p-like
SCOP superfamily Sama2622-like
SCOP superfamily RPA2825-like
SCOP superfamily Jann4075-like
SCOP superfamily TAFH domain-like
SCOP superfamily FLJ32549 domain-like
SCOP superfamily IVS-encoded protein-like
SCOP superfamily Ta0600-like
SCOP superfamily HP0062-like
SCOP superfamily TM1646-like
SCOP superfamily Sec2 N-terminal region
SCOP superfamily Eferin C-derminal domain-like
SCOP superfamily MPN010-like
SCOP superfamily Viral leader polypeptide zinc finger
SCOP superfamily Coronavirus NSP10-like
SCOP superfamily Vanabin-like
SCOP superfamily Peptidoglycan deacetylase N-terminal noncatalytic region
SCOP superfamily ORC1-binding domain
SCOP superfamily YwmB-like
SCOP superfamily GAS2 domain-like
SCOP superfamily FwdE-like
SCOP superfamily TM1622-like
SCOP superfamily Transposase IS200-like
SCOP superfamily LD-carboxypeptidase A C-terminal domain-like
SCOP superfamily MFPT repeat-like
SCOP superfamily BH3618-like
SCOP superfamily GatD N-terminal domain-like
SCOP superfamily Agglutinin HPA-like
SCOP superfamily Topoisomerase V catalytic domain-like
SCOP superfamily Duffy binding domain-like
SCOP superfamily PriB N-terminal domain-like
SCOP superfamily TROVE domain-like
SCOP superfamily Pseudo ankyrin repeat-like
SCOP superfamily USP8 N-terminal domain-like
SCOP superfamily RUN domain-like
SCOP superfamily IpaD-like
SCOP superfamily Hyaluronidase post-catalytic domain-like
SCOP superfamily EF2947-like
SCOP superfamily MukF C-terminal domain-like
SCOP superfamily TM0693-like
SCOP superfamily LemA-like
SCOP superfamily EsxAB dimer-like
SCOP superfamily MW0975(SA0943)-like
SCOP superfamily YppE-like
SCOP superfamily EF2458-like
SCOP superfamily Calcyclin-binding protein-like
SCOP superfamily Variant surface glycoprotein MITAT 1.2, VSG 221, C-terminal domain
SCOP superfamily Connexin43
SCOP superfamily Proton glutamate symport protein
SCOP superfamily TM1457-like
SCOP superfamily WWE domain
SCOP superfamily YbjQ-like
SCOP superfamily FumA C-terminal domain-like
SCOP superfamily Beta-galactosidase LacA, domain 3
SCOP superfamily DNA primase DnaG, C-terminal domain
SCOP superfamily Hypothetical protein MPN330
SCOP superfamily RNA-binding protein She2p
SCOP superfamily EspA/CesA-like
SCOP superfamily XseB-like
SCOP superfamily DNA methylase specificity domain
SCOP superfamily Coronavirus S2 glycoprotein
SCOP superfamily Geminin coiled-coil domain
SCOP superfamily YAP1 redox domain
SCOP superfamily OmpH-like
SCOP superfamily VP4 membrane interaction domain
SCOP superfamily Urocanase
SCOP superfamily Recombination protein RecR
SCOP superfamily Sulfolobus fructose-1,6-bisphosphatase-like
SCOP superfamily YggX-like
SCOP superfamily Hypothetical protein PF0899
SCOP superfamily Glycerate kinase I
SCOP superfamily GDNF receptor-like
SCOP superfamily I/LWEQ domain
SCOP superfamily A middle domain of Talin 1
SCOP superfamily CAPPD, an extracellular domain of amyloid beta A4 protein
SCOP superfamily Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain
SCOP superfamily Nickel-containing superoxide dismutase, NiSOD
SCOP superfamily PhoU-like
SCOP superfamily G protein-binding domain
SCOP superfamily Plexin repeat
SCOP superfamily Autotransporter
SCOP superfamily Respiratory nitrate reductase 1 gamma chain
SCOP superfamily 39 kda initiator binding protein, IBP39, C-terminal domains
SCOP superfamily OmpA-like
SCOP superfamily mRNA decapping enzyme DcpS N-terminal domain
SCOP superfamily Trimeric adhesin
SCOP superfamily Adhesin YadA, collagen-binding domain
SCOP superfamily Sema domain
SCOP superfamily Hypothetical protein YfhH
SCOP superfamily Stathmin
SCOP superfamily Hsp90 co-chaperone CDC37
SCOP superfamily YutG-like
SCOP superfamily Flavivirus capsid protein C
SCOP superfamily Typo IV secretion system protein TraC
SCOP superfamily IP3 receptor type 1 binding core, domain 2
SCOP superfamily Plant proteinase inhibitors
SCOP superfamily Kazal-type serine protease inhibitors

Jump to [ Top of page · Assignment statistics ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.