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  Home > Genomes > Superfamily assignments for Oryza sativa v193


Oryza sativa v193 superfamily assignments

Taxonomy
Taxonomy browser entry

Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

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Fasta format sequences
Domain assignments

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Assignment statistics

Sequences: 66338 total
32867 (50 %) with assignment
446 average length
39 % amino acid coverage
Domains: 51632 total
974 unique superfamilies
808 unique families
352 average length
53 average superfamily size
98 % formed by duplication
Domain combinations: 1084 domain pairs
4045 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies
5130 4160 229 4 SCOP 53098 Ribonuclease H-like
4442 4385 249 4 SCOP 56672 DNA/RNA polymerases
2216 2042 146 0 SCOP 57756 Retrovirus zinc finger-like domains
2171 1900 284 11 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
2171 2122 201 4 SCOP 56112 Protein kinase-like (PK-like)
1476 1474 98 1 SCOP 50630 Acid proteases
1476 1173 165 2 SCOP 52058 L domain-like
1106 1105 64 9 SCOP 54001 Cysteine proteinases
872 785 104 3 SCOP 57850 RING/U-box
850 840 80 0 SCOP 81383 F-box domain
822 815 64 0 SCOP 54160 Chromo domain-like
717 660 111 0 SCOP 52047 RNI-like
673 508 65 1 SCOP 54928 RNA-binding domain, RBD
627 620 45 8 SCOP 51735 NAD(P)-binding Rossmann-fold domains
593 592 19 9 SCOP 53474 alpha/beta-Hydrolases
572 492 89 10 SCOP 48371 ARM repeat
548 448 77 2 SCOP 48452 TPR-like
542 507 35 2 SCOP 46689 Homeodomain-like
460 410 33 18 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
433 430 12 1 SCOP 48264 Cytochrome P450
423 420 46 8 SCOP 51445 (Trans)glycosidases
414 396 8 0 SCOP 103473 MFS general substrate transporter
386 379 13 5 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
385 336 40 4 SCOP 52833 Thioredoxin-like
352 336 53 1 SCOP 50978 WD40 repeat-like
319 212 73 5 SCOP 50249 Nucleic acid-binding proteins
319 270 39 0 SCOP 57667 beta-beta-alpha zinc fingers
277 267 42 1 SCOP 48403 Ankyrin repeat
269 183 48 4 SCOP 54236 Ubiquitin-like
262 225 16 1 SCOP 54171 DNA-binding domain
256 242 32 1 SCOP 47473 EF-hand
253 251 40 8 SCOP 56784 HAD-like
244 241 46 2 SCOP 56219 DNase I-like
240 194 27 5 SCOP 51905 FAD/NAD(P)-binding domain
239 239 10 0 SCOP 47459 HLH, helix-loop-helix DNA-binding domain
235 229 32 1 SCOP 54695 POZ domain
226 161 9 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
223 119 12 2 SCOP 49503 Cupredoxins
217 210 42 2 SCOP 46785 "Winged helix" DNA-binding domain
208 208 36 1 SCOP 101447 Formin homology 2 domain (FH2 domain)
206 107 21 4 SCOP 53067 Actin-like ATPase domain
206 205 11 3 SCOP 51197 Clavaminate synthase-like
202 197 32 3 SCOP 49899 Concanavalin A-like lectins/glucanases
198 133 30 1 SCOP 49562 C2 domain (Calcium/lipid-binding domain, CaLB)
196 195 7 1 SCOP 48113 Heme-dependent peroxidases
190 190 4 2 SCOP 47699 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
188 187 14 4 SCOP 53448 Nucleotide-diphospho-sugar transferases
176 175 6 1 SCOP 101941 NAC domain
170 164 21 1 SCOP 49599 TRAF domain-like
168 132 22 1 SCOP 101936 DNA-binding pseudobarrel domain
159 151 14 5 SCOP 53383 PLP-dependent transferases
159 80 31 0 SCOP 90229 CCCH zinc finger
157 156 30 1 SCOP 46565 Chaperone J-domain
156 86 7 2 SCOP 53901 Thiolase-like
154 146 15 0 SCOP 51110 alpha-D-mannose-specific plant lectins
152 136 49 1 SCOP 57903 FYVE/PHD zinc finger
151 90 14 1 SCOP 47954 Cyclin-like
149 129 10 1 SCOP 118290 WRKY DNA-binding domain
145 143 10 1 SCOP 81606 PP2C-like
135 135 5 0 SCOP 57959 Leucine zipper domain
134 133 6 6 SCOP 51182 RmlC-like cupins
133 133 15 0 SCOP 54277 CAD & PB1 domains
129 106 19 0 SCOP 55961 Bet v1-like
126 89 17 0 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
123 105 14 1 SCOP 50494 Trypsin-like serine proteases
121 74 26 1 SCOP 55021 ACT-like
119 89 10 3 SCOP 48239 Terpenoid cyclases/Protein prenyltransferases
117 117 8 3 SCOP 51126 Pectin lyase-like
117 117 4 1 SCOP 52266 SGNH hydrolase
114 65 21 1 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
109 109 15 1 SCOP 47616 GST C-terminal domain-like
103 94 19 1 SCOP 117281 Kelch motif
102 102 4 0 SCOP 55455 SRF-like
101 85 15 0 SCOP 55008 HMA, heavy metal-associated domain
99 99 18 3 SCOP 52402 Adenine nucleotide alpha hydrolases-like
99 99 6 2 SCOP 47113 Histone-fold
98 78 6 1 SCOP 50129 GroES-like
98 75 24 3 SCOP 49785 Galactose-binding domain-like
98 55 17 1 SCOP 90123 ABC transporter transmembrane region
97 50 20 0 SCOP 90209 Ran binding protein zinc finger-like
96 89 33 8 SCOP 54211 Ribosomal protein S5 domain 2-like
95 95 12 2 SCOP 54495 UBC-like
93 93 9 1 SCOP 74788 Cullin repeat-like
92 92 4 1 SCOP 103506 Mitochondrial carrier
92 84 18 0 SCOP 81901 HCP-like
90 89 9 3 SCOP 48576 Terpenoid synthases
87 82 28 4 SCOP 52374 Nucleotidylyl transferase
86 86 11 4 SCOP 56300 Metallo-dependent phosphatases
81 81 4 2 SCOP 50685 Barwin-like endoglucanases
81 81 7 0 SCOP 101148 Plant invertase/pectin methylesterase inhibitor
80 80 8 1 SCOP 56801 Acetyl-CoA synthetase-like
78 51 15 1 SCOP 54534 FKBP-like
78 76 6 1 SCOP 49590 PHL pollen allergen
77 61 16 0 SCOP 54631 CBS-domain pair
75 70 13 4 SCOP 52096 ClpP/crotonase
74 49 10 6 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
74 73 11 4 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
74 74 19 1 SCOP 53300 vWA-like
73 73 9 3 SCOP 64356 SNARE-like
73 73 27 3 SCOP 50729 PH domain-like
72 70 28 3 SCOP 81296 E set domains
72 67 15 0 SCOP 52172 CheY-like
71 61 12 0 SCOP 58038 SNARE fusion complex
71 57 22 0 SCOP 46934 UBA-like
70 67 16 1 SCOP 81665 Calcium ATPase, transmembrane domain M
69 69 10 0 SCOP 52743 Subtilisin-like
66 53 17 0 SCOP 50985 RCC1/BLIP-II
63 63 26 3 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
63 22 8 1 SCOP 63411 LuxS/MPP-like metallohydrolase
63 42 20 0 SCOP 54768 dsRNA-binding domain-like
62 59 7 1 SCOP 52777 CoA-dependent acyltransferases
61 60 16 2 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
61 34 8 1 SCOP 47923 Ypt/Rab-GAP domain of gyp1p
60 60 6 2 SCOP 48208 Six-hairpin glycosidases
60 60 13 1 SCOP 81653 Calcium ATPase, transduction domain A
59 59 7 3 SCOP 49764 HSP20-like chaperones
58 56 18 3 SCOP 52799 (Phosphotyrosine protein) phosphatases II
58 54 19 0 SCOP 81324 Voltage-gated potassium channels
57 55 22 2 SCOP 50447 Translation proteins
56 44 13 2 SCOP 52317 Class I glutamine amidotransferase-like
56 56 12 1 SCOP 52087 CRAL/TRIO domain
55 54 8 5 SCOP 51569 Aldolase
55 55 11 2 SCOP 56176 FAD-binding/transporter-associated domain-like
54 54 3 1 SCOP 51430 NAD(P)-linked oxidoreductase
54 54 6 2 SCOP 54518 Tubby C-terminal domain-like
54 54 19 3 SCOP 88697 PUA domain-like
54 54 17 2 SCOP 82199 SET domain
54 39 13 1 SCOP 51101 Mannose-binding lectins
53 53 9 4 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
53 53 8 1 SCOP 48464 ENTH/VHS domain
52 31 9 1 SCOP 55785 PYP-like sensor domain (PAS domain)
52 52 15 0 SCOP 50965 Galactose oxidase, central domain
52 27 10 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
51 50 13 0 SCOP 57196 EGF/Laminin
50 25 9 1 SCOP 56024 Phospholipase D/nuclease
49 49 22 2 SCOP 55681 Class II aaRS and biotin synthetases
49 49 6 1 SCOP 103511 Chlorophyll a-b binding protein
49 49 18 3 SCOP 81301 Nucleotidyltransferase
48 48 14 1 SCOP 53850 Periplasmic binding protein-like II
48 22 8 2 SCOP 55753 Actin depolymerizing proteins
48 34 20 0 SCOP 52113 BRCT domain
47 36 10 2 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
46 46 4 1 SCOP 81338 Aquaporin-like
46 46 10 1 SCOP 50891 Cyclophilin-like
46 46 11 1 SCOP 51011 Glycosyl hydrolase domain
46 46 5 1 SCOP 49870 Osmotin, thaumatin-like protein
45 45 10 4 SCOP 74650 Galactose mutarotase-like
45 35 13 0 SCOP 57889 Cysteine-rich domain
44 42 17 4 SCOP 56059 Glutathione synthetase ATP-binding domain-like
44 36 10 2 SCOP 51695 PLC-like phosphodiesterases
44 44 8 7 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
44 30 6 1 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
44 43 5 1 SCOP 55797 PR-1-like
44 33 7 0 SCOP 82153 FAS1 domain
44 39 10 2 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
43 41 13 3 SCOP 63380 Riboflavin synthase domain-like
42 42 3 1 SCOP 141562 At5g01610-like
41 41 11 1 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
40 39 5 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
40 38 7 1 SCOP 51395 FMN-linked oxidoreductases
40 40 12 4 SCOP 53187 Zn-dependent exopeptidases
40 40 6 1 SCOP 50182 Sm-like ribonucleoproteins
40 38 13 1 SCOP 51206 cAMP-binding domain-like
40 40 6 0 SCOP 89009 GAT-like domain
39 39 10 2 SCOP 53137 Translational machinery components
39 36 11 0 SCOP 57997 Tropomyosin
39 39 12 0 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
39 39 6 0 SCOP 56371 Ribosome inactivating proteins (RIP)
39 39 6 0 SCOP 46938 CRAL/TRIO N-terminal domain
39 38 16 0 SCOP 63748 Tudor/PWWP/MBT
38 35 8 3 SCOP 52821 Rhodanese/Cell cycle control phosphatase
37 37 6 1 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
37 20 5 0 SCOP 75471 YhbY-like
37 37 11 2 SCOP 52029 GroEL apical domain-like
37 37 7 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
37 12 5 1 SCOP 53738 Phosphoglucomutase, first 3 domains
37 37 10 1 SCOP 47370 Bromodomain
36 34 11 1 SCOP 50104 Translation proteins SH3-like domain
36 33 9 3 SCOP 55120 Pseudouridine synthase
36 36 9 1 SCOP 54427 NTF2-like
36 36 5 0 SCOP 144091 Rhomboid-like
36 35 12 1 SCOP 101690 PAZ domain
35 31 8 4 SCOP 51161 Trimeric LpxA-like enzymes
35 35 4 2 SCOP 53720 ALDH-like
35 35 4 0 SCOP 117856 AF0104/ALDC/Ptd012-like
34 29 7 2 SCOP 53271 PRTase-like
34 34 7 2 SCOP 55811 Nudix
34 34 8 4 SCOP 54373 FAD-linked reductases, C-terminal domain
33 32 9 2 SCOP 56281 Metallo-hydrolase/oxidoreductase
33 31 8 0 SCOP 47095 HMG-box
33 33 9 0 SCOP 50156 PDZ domain-like
33 30 6 0 SCOP 54849 GroEL-intermediate domain like
32 32 6 1 SCOP 54292 2Fe-2S ferredoxin-like
32 32 7 0 SCOP 63829 Calcium-dependent phosphotriesterase
32 32 6 1 SCOP 56399 ADP-ribosylation
32 17 8 1 SCOP 54980 EF-G C-terminal domain-like
32 32 8 0 SCOP 90257 Myosin rod fragments
31 31 8 0 SCOP 111331 NAD kinase/diacylglycerol kinase-like
31 30 11 2 SCOP 53254 Phosphoglycerate mutase-like
31 31 7 1 SCOP 51230 Single hybrid motif
31 31 12 0 SCOP 82171 DPP6 N-terminal domain-like
31 31 12 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
31 31 5 1 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
31 31 9 1 SCOP 81631 PAP/OAS1 substrate-binding domain
31 31 9 1 SCOP 52025 PA domain
30 26 10 4 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
30 30 6 2 SCOP 55315 L30e-like
30 25 10 0 SCOP 57783 Zinc beta-ribbon
30 29 8 1 SCOP 48592 GroEL equatorial domain-like
30 30 15 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
30 30 6 1 SCOP 49363 Purple acid phosphatase, N-terminal domain
30 30 7 1 SCOP 81382 Skp1 dimerisation domain-like
29 29 5 3 SCOP 53613 Ribokinase-like
29 29 3 1 SCOP 103612 SBT domain
28 28 10 6 SCOP 51556 Metallo-dependent hydrolases
28 28 10 1 SCOP 49879 SMAD/FHA domain
28 18 13 0 SCOP 69065 RNase III domain-like
28 28 9 3 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
28 10 2 1 SCOP 55973 S-adenosylmethionine synthetase
28 28 5 0 SCOP 57863 ArfGap/RecO-like zinc finger
28 28 3 1 SCOP 52279 Beta-D-glucan exohydrolase, C-terminal domain
28 26 6 0 SCOP 118310 AN1-like Zinc finger
28 28 5 1 SCOP 49723 Lipase/lipooxygenase domain (PLAT/LH2 domain)
27 27 6 5 SCOP 51366 Ribulose-phoshate binding barrel
27 27 9 2 SCOP 53633 Carbamate kinase-like
27 27 6 3 SCOP 48150 DNA-glycosylase
27 23 3 1 SCOP 117070 LEA14-like
27 27 7 1 SCOP 47661 t-snare proteins
27 27 8 0 SCOP 49354 PapD-like
27 27 3 0 SCOP 117892 Band 7/SPFH domain
27 24 5 1 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
26 26 4 0 SCOP 57829 Zn-binding ribosomal proteins
25 25 3 1 SCOP 75304 Amidase signature (AS) enzymes
25 25 5 2 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
25 21 6 2 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
25 25 7 1 SCOP 75005 Arabinanase/levansucrase/invertase
25 23 6 1 SCOP 56574 Serpins
25 25 5 1 SCOP 52490 Tubulin nucleotide-binding domain-like
25 25 7 0 SCOP 57184 Growth factor receptor domain
25 19 3 1 SCOP 47862 Saposin
24 24 4 1 SCOP 53784 Phosphofructokinase
24 23 6 2 SCOP 48557 L-aspartase-like
24 24 12 2 SCOP 56104 SAICAR synthase-like
24 24 6 1 SCOP 55856 Cytochrome b5-like heme/steroid binding domain
24 24 4 2 SCOP 52151 FabD/lysophospholipase-like
24 24 5 2 SCOP 52768 Arginase/deacetylase
24 24 6 4 SCOP 52467 DHS-like NAD/FAD-binding domain
24 23 12 0 SCOP 49452 Starch-binding domain-like
24 20 10 0 SCOP 54106 LysM domain
24 20 9 0 SCOP 51045 WW domain
23 21 5 2 SCOP 53927 Cytidine deaminase-like
23 23 3 1 SCOP 48484 Lipoxigenase
23 22 4 1 SCOP 54403 Cystatin/monellin
23 23 3 0 SCOP 47676 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
22 21 6 2 SCOP 54197 HIT-like
22 22 11 1 SCOP 55920 Creatinase/aminopeptidase
22 22 11 2 SCOP 54862 4Fe-4S ferredoxins
22 17 9 1 SCOP 55781 GAF domain-like
22 22 2 1 SCOP 49777 PEBP-like
22 22 4 1 SCOP 102405 MCP/YpsA-like
22 22 2 0 SCOP 52091 SpoIIaa-like
22 20 6 1 SCOP 53955 Lysozyme-like
22 11 3 0 SCOP 57247 Bowman-Birk inhibitor, BBI
21 21 4 2 SCOP 47240 Ferritin-like
21 21 5 3 SCOP 100950 NagB/RpiA/CoA transferase-like
21 20 4 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
21 20 3 1 SCOP 56655 Carbohydrate phosphatase
21 21 3 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
21 21 3 1 SCOP 55724 Mog1p/PsbP-like
21 9 5 0 SCOP 50199 Staphylococcal nuclease
21 15 8 0 SCOP 50370 Ricin B-like lectins
21 19 4 0 SCOP 50405 Actin-crosslinking proteins
21 21 14 0 SCOP 47384 Homodimeric domain of signal transducing histidine kinase
21 21 9 0 SCOP 81995 beta-sandwich domain of Sec23/24
21 21 2 1 SCOP 55307 Tubulin C-terminal domain-like
21 21 5 1 SCOP 49447 Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
20 20 5 2 SCOP 102114 Radical SAM enzymes
20 13 4 1 SCOP 53590 Nucleoside hydrolase
20 20 5 0 SCOP 161219 CHY zinc finger-like
20 13 3 1 SCOP 54909 Dimeric alpha+beta barrel
20 18 9 1 SCOP 52440 PreATP-grasp domain
20 20 4 1 SCOP 140990 FtsH protease domain-like
20 20 1 1 SCOP 48445 14-3-3 protein
20 20 5 0 SCOP 161245 Zinc hairpin stack
20 20 2 0 SCOP 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
19 19 2 1 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
19 18 4 0 SCOP 47336 ACP-like
19 12 4 0 SCOP 81333 F1F0 ATP synthase subunit C
19 19 1 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
19 19 2 0 SCOP 51306 LexA/Signal peptidase
19 19 4 0 SCOP 53822 Periplasmic binding protein-like I
19 15 6 2 SCOP 47203 Acyl-CoA dehydrogenase C-terminal domain-like
19 12 8 0 SCOP 82185 Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
18 17 4 1 SCOP 56815 Sec1/munc18-like (SM) proteins
18 18 3 1 SCOP 52425 Cryptochrome/photolyase, N-terminal domain
18 9 4 0 SCOP 88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors
18 18 1 1 SCOP 56327 LDH C-terminal domain-like
18 18 5 0 SCOP 48350 GTPase activation domain, GAP
18 16 6 0 SCOP 158639 ENT-like
18 16 7 1 SCOP 82754 C-terminal, gelsolin-like domain of Sec23/24
18 18 2 0 SCOP 103243 KA1-like
17 17 3 1 SCOP 56276 S-adenosylmethionine decarboxylase
17 17 4 1 SCOP 50475 FMN-binding split barrel
17 17 7 2 SCOP 109604 HD-domain/PDEase-like
17 17 5 1 SCOP 50022 ISP domain
17 17 6 0 SCOP 161111 Cation efflux protein transmembrane domain-like
17 17 4 0 SCOP 50800 PK beta-barrel domain-like
17 17 3 0 SCOP 160443 SMR domain-like
16 16 7 1 SCOP 88723 PIN domain-like
16 16 7 1 SCOP 47576 Calponin-homology domain, CH-domain
16 12 5 1 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
16 13 10 1 SCOP 47592 SWIB/MDM2 domain
16 16 3 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
16 16 6 2 SCOP 51246 Rudiment single hybrid motif
16 16 2 0 SCOP 54654 CI-2 family of serine protease inhibitors
16 16 3 2 SCOP 52922 TK C-terminal domain-like
16 16 6 0 SCOP 144232 HIT/MYND zinc finger-like
16 16 6 0 SCOP 46774 ARID-like
16 16 3 0 SCOP 47769 SAM/Pointed domain
16 16 4 0 SCOP 54529 Mitochondrial glycoprotein MAM33-like
16 16 6 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
15 15 1 1 SCOP 47973 Ribosomal protein S7
15 15 5 1 SCOP 55174 Alpha-L RNA-binding motif
15 15 2 1 SCOP 50324 Inorganic pyrophosphatase
15 15 3 1 SCOP 52161 Ribosomal protein L13
15 15 6 2 SCOP 55931 Glutamine synthetase/guanido kinase
15 15 7 0 SCOP 52954 Class II aaRS ABD-related
15 15 1 1 SCOP 51069 Carbonic anhydrase
15 15 4 1 SCOP 81340 Clc chloride channel
15 15 7 2 SCOP 56645 Acyl-CoA dehydrogenase NM domain-like
15 15 9 0 SCOP 69322 Tricorn protease domain 2
15 15 7 0 SCOP 81923 Double Clp-N motif
15 15 6 0 SCOP 55060 GHMP Kinase, C-terminal domain
14 14 5 2 SCOP 53697 SIS domain
14 14 3 1 SCOP 103491 Preprotein translocase SecY subunit
14 14 8 0 SCOP 103657 BAR/IMD domain-like
14 14 3 0 SCOP 46579 Prefoldin
14 14 5 1 SCOP 53649 Alkaline phosphatase-like
14 14 3 2 SCOP 46626 Cytochrome c
14 14 2 0 SCOP 47072 Cysteine alpha-hairpin motif
14 14 2 1 SCOP 48173 Cryptochrome/photolyase FAD-binding domain
14 14 3 1 SCOP 82704 AlbA-like
14 14 3 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
14 14 4 1 SCOP 56003 Molybdenum cofactor-binding domain
14 14 4 1 SCOP 55103 FAD-linked oxidases, C-terminal domain
14 14 5 0 SCOP 48019 post-AAA+ oligomerization domain-like
14 14 2 0 SCOP 52935 PK C-terminal domain-like
14 14 2 1 SCOP 55031 Bacterial exopeptidase dimerisation domain
14 14 6 1 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
14 14 5 0 SCOP 82919 Zn-finger domain of Sec23/24
13 13 4 1 SCOP 56808 Ribosomal protein L1
13 13 6 2 SCOP 52218 Flavoproteins
13 9 2 2 SCOP 51726 UROD/MetE-like
13 13 6 1 SCOP 47819 HRDC-like
13 13 1 1 SCOP 111352 Ammonium transporter
13 12 6 0 SCOP 88946 Sigma2 domain of RNA polymerase sigma factors
13 8 3 1 SCOP 56053 Ribosomal protein L6
13 13 7 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
13 10 4 0 SCOP 57016 Plant lectins/antimicrobial peptides
13 12 3 0 SCOP 57429 Crambin-like
13 12 3 0 SCOP 55666 Ribonuclease PH domain 2-like
13 7 4 1 SCOP 54416 Amine oxidase N-terminal region
13 13 6 0 SCOP 57933 TAZ domain
13 13 4 1 SCOP 81811 Helical domain of Sec23/24
12 12 2 1 SCOP 50193 Ribosomal protein L14
12 12 1 1 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
12 12 7 2 SCOP 75217 alpha/beta knot
12 12 6 1 SCOP 56317 Carbon-nitrogen hydrolase
12 12 4 1 SCOP 49329 Cu,Zn superoxide dismutase-like
12 12 4 0 SCOP 55257 RBP11-like subunits of RNA polymerase
12 12 3 1 SCOP 55159 eIF1-like
12 12 4 0 SCOP 102712 JAB1/MPN domain
12 12 3 1 SCOP 101112 Oxygen-evolving enhancer protein 3,
12 12 7 0 SCOP 52075 Outer arm dynein light chain 1
12 12 4 1 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
12 12 2 1 SCOP 47874 Annexin
12 9 4 0 SCOP 109905 Surp module (SWAP domain)
12 12 2 0 SCOP 57095 Scorpion toxin-like
12 12 4 0 SCOP 110942 HSP90 C-terminal domain
12 8 5 0 SCOP 47762 PAH2 domain
12 12 2 1 SCOP 63887 P-domain of calnexin/calreticulin
12 11 2 0 SCOP 140383 BSD domain-like
11 11 3 2 SCOP 54686 Ribosomal protein L16p/L10e
11 11 3 0 SCOP 110324 Ribosomal L27 protein-like
11 11 2 1 SCOP 55144 LigT-like
11 11 3 1 SCOP 48439 Protein prenylyltransferase
11 6 3 1 SCOP 69645 Arp2/3 complex subunits
11 11 2 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
11 11 3 1 SCOP 143113 NAP-like
11 8 4 1 SCOP 51338 Composite domain of metallo-dependent hydrolases
11 11 3 1 SCOP 54626 Chalcone isomerase
11 6 3 1 SCOP 56014 Nitrite and sulphite reductase 4Fe-4S domain-like
11 11 3 1 SCOP 54821 Ribosomal protein S3 C-terminal domain
11 11 8 0 SCOP 48334 DNA repair protein MutS, domain III
11 11 8 0 SCOP 68906 SAP domain
11 8 6 1 SCOP 158702 Sec63 N-terminal domain-like
11 11 4 1 SCOP 56204 Hect, E3 ligase catalytic domain
11 11 6 0 SCOP 57414 Hairpin loop containing domain-like
11 11 3 1 SCOP 75632 Cullin homology domain
11 3 2 0 SCOP 81698 FF domain
11 11 3 0 SCOP 55003 PAP/Archaeal CCA-adding enzyme, C-terminal domain
11 11 1 1 SCOP 116768 DNA-binding domain of EIN3-like
10 10 3 1 SCOP 52080 Ribosomal proteins L15p and L18e
10 10 2 1 SCOP 75620 Release factor
10 10 5 0 SCOP 47060 S15/NS1 RNA-binding domain
10 10 3 1 SCOP 52313 Ribosomal protein S2
10 10 2 1 SCOP 64005 Undecaprenyl diphosphate synthase
10 10 5 2 SCOP 51419 PLP-binding barrel
10 9 8 1 SCOP 52949 Macro domain-like
10 10 3 1 SCOP 56322 ADC synthase
10 10 3 1 SCOP 53056 beta-carbonic anhydrase, cab
10 10 4 0 SCOP 64268 PX domain
10 10 4 1 SCOP 53800 Chelatase
10 10 5 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
10 10 3 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
10 9 4 1 SCOP 50814 Lipocalins
10 10 2 2 SCOP 51604 Enolase C-terminal domain-like
10 10 2 1 SCOP 54826 Enolase N-terminal domain-like
10 10 3 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
10 10 2 0 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
10 5 2 1 SCOP 55124 Nitrite/Sulfite reductase N-terminal domain-like
10 10 2 1 SCOP 109993 VPS9 domain
10 10 4 0 SCOP 63491 BAG domain
10 10 2 0 SCOP 101238 XPC-binding domain
9 9 3 1 SCOP 54843 Ribosomal protein L22
9 9 3 1 SCOP 53748 Phosphoglycerate kinase
9 9 2 2 SCOP 51316 Mss4-like
9 9 3 1 SCOP 50715 Ribosomal protein L25-like
9 9 6 0 SCOP 101908 Putative isomerase YbhE
9 9 3 1 SCOP 48256 Citrate synthase
9 8 3 2 SCOP 52972 ITPase-like
9 6 4 2 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
9 9 2 0 SCOP 103256 Hypothetical protein TM0160
9 9 2 0 SCOP 54736 ClpS-like
9 9 1 0 SCOP 53182 Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
9 7 4 0 SCOP 55136 Probable bacterial effector-binding domain
9 9 3 1 SCOP 89124 Nop domain
9 8 5 1 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
9 9 3 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
9 9 3 1 SCOP 49348 Clathrin adaptor appendage domain
9 9 4 0 SCOP 82708 R3H domain
9 9 5 0 SCOP 47895 Transducin (alpha subunit), insertion domain
9 9 2 0 SCOP 110004 Glycolipid transfer protein, GLTP
9 9 7 0 SCOP 55277 GYF domain
9 9 4 1 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
8 8 3 1 SCOP 54999 Ribosomal protein S10
8 8 2 0 SCOP 54570 Ribosomal protein S19
8 8 3 0 SCOP 46946 S13-like H2TH domain
8 4 3 0 SCOP 56214 4'-phosphopantetheinyl transferase
8 8 2 0 SCOP 160369 Ribosomal protein L10-like
8 8 2 1 SCOP 51351 Triosephosphate isomerase (TIM)
8 8 4 2 SCOP 55821 YrdC/RibB
8 8 2 0 SCOP 144122 Tim10-like
8 8 1 1 SCOP 47226 Histidine-containing phosphotransfer domain, HPT domain
8 8 4 1 SCOP 53328 Formyltransferase
8 8 2 1 SCOP 54648 DLC
8 8 5 0 SCOP 47027 Acyl-CoA binding protein
8 8 3 0 SCOP 144000 Oxysterol-binding protein-like
8 8 2 1 SCOP 56019 The spindle assembly checkpoint protein mad2
8 8 1 1 SCOP 111126 Ligand-binding domain in the NO signalling and Golgi transport
8 8 2 0 SCOP 82282 Homocysteine S-methyltransferase
8 8 2 1 SCOP 88713 Glycoside hydrolase/deacetylase
8 8 3 1 SCOP 56529 FAH
8 8 1 1 SCOP 46458 Globin-like
8 8 1 1 SCOP 81558 Photosystem I subunits PsaA/PsaB
8 8 2 1 SCOP 81483 Bacterial photosystem II reaction centre, L and M subunits
8 8 1 1 SCOP 161077 Photosystem II antenna protein-like
8 8 3 0 SCOP 110857 Gamma-glutamyl cyclotransferase-like
8 8 3 1 SCOP 50993 Peptidase/esterase 'gauge' domain
8 7 6 0 SCOP 47781 RuvA domain 2-like
8 8 4 1 SCOP 46548 alpha-helical ferredoxin
8 8 4 1 SCOP 55895 Ribonuclease Rh-like
8 8 6 0 SCOP 53092 Creatinase/prolidase N-terminal domain
8 8 4 0 SCOP 46589 tRNA-binding arm
8 8 5 0 SCOP 101898 NHL repeat
8 8 2 1 SCOP 54665 CO dehydrogenase molybdoprotein N-domain-like
8 8 2 1 SCOP 55447 CO dehydrogenase flavoprotein C-terminal domain-like
8 8 2 1 SCOP 47741 CO dehydrogenase ISP C-domain like
8 8 1 0 SCOP 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
8 8 3 0 SCOP 144074 E2F-DP heterodimerization region
8 8 2 1 SCOP 88688 Families 57/38 glycoside transferase middle domain
8 8 3 0 SCOP 54368 Glutamine synthetase, N-terminal domain
8 8 3 0 SCOP 140111 Endosomal sorting complex assembly domain
8 8 4 0 SCOP 50916 Rap30/74 interaction domains
8 8 6 0 SCOP 159042 Plus3-like
7 7 3 1 SCOP 55282 RL5-like
7 7 1 1 SCOP 56047 Ribosomal protein S8
7 7 3 0 SCOP 143800 L28p-like
7 7 1 1 SCOP 56770 HydA/Nqo6-like
7 7 3 0 SCOP 82657 BolA-like
7 7 2 0 SCOP 55129 Ribosomal protein L30p/L7e
7 7 2 0 SCOP 144217 CSL zinc finger
7 7 2 1 SCOP 56634 Heme-dependent catalase-like
7 7 1 0 SCOP 81524 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
7 7 2 0 SCOP 58113 Apolipoprotein A-I
7 7 1 1 SCOP 55239 RuBisCO, small subunit
7 7 2 0 SCOP 89550 PHP domain-like
7 5 2 1 SCOP 53218 Molybdenum cofactor biosynthesis proteins
7 7 4 1 SCOP 53732 Aconitase iron-sulfur domain
7 7 2 1 SCOP 89562 RraA-like
7 7 2 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
7 7 3 0 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
7 7 2 1 SCOP 52210 Succinyl-CoA synthetase domains
7 7 3 1 SCOP 50621 Alanine racemase C-terminal domain-like
7 7 5 1 SCOP 53623 MurD-like peptide ligases, catalytic domain
7 7 2 1 SCOP 48225 Seven-hairpin glycosidases
7 7 3 0 SCOP 144083 Magnesium transport protein CorA, transmembrane region
7 7 3 1 SCOP 49998 Amine oxidase catalytic domain
7 7 2 0 SCOP 75689 Zinc-binding domain of translation initiation factor 2 beta
7 7 2 0 SCOP 100966 Translation initiation factor 2 beta, aIF2beta, N-terminal domain
7 5 4 1 SCOP 55945 TATA-box binding protein-like
7 5 2 0 SCOP 55116 Formiminotransferase domain of formiminotransferase-cyclodeaminase.
7 7 2 0 SCOP 55545 beta-N-acetylhexosaminidase-like domain
7 7 3 1 SCOP 55957 Phosphoglucomutase, C-terminal domain
7 7 3 0 SCOP 63570 PABC (PABP) domain
7 7 2 1 SCOP 89942 eEF1-gamma domain
6 6 2 1 SCOP 53178 Peptidyl-tRNA hydrolase-like
6 6 5 1 SCOP 82649 SufE/NifU
6 6 4 0 SCOP 89360 HesB-like domain
6 6 1 0 SCOP 52042 Ribosomal protein L32e
6 6 2 0 SCOP 141678 MAL13P1.257-like
6 6 4 0 SCOP 63393 RNA polymerase subunits
6 4 3 2 SCOP 54506 Diaminopimelate epimerase-like
6 5 4 1 SCOP 63562 RPB6/omega subunit-like
6 6 2 1 SCOP 53795 PEP carboxykinase-like
6 6 4 0 SCOP 141571 Pentapeptide repeat-like
6 6 4 1 SCOP 52016 LeuD/IlvD-like
6 6 4 1 SCOP 110069 ApaG-like
6 6 3 0 SCOP 75011 3-carboxy-cis,cis-mucoante lactonizing enzyme
6 6 5 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
6 6 1 1 SCOP 102198 Putative cyclase
6 6 5 1 SCOP 55186 ThrRS/AlaRS common domain
6 6 4 0 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
6 6 2 1 SCOP 68923 PEP carboxykinase N-terminal domain
6 6 3 1 SCOP 48056 Di-copper centre-containing domain
6 6 1 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
6 6 6 1 SCOP 81837 BEACH domain
6 6 5 1 SCOP 81271 TGS-like
6 6 3 0 SCOP 158573 GINS helical bundle-like
6 3 1 0 SCOP 55394 Bactericidal permeability-increasing protein, BPI
6 2 2 0 SCOP 49303 beta-Galactosidase/glucuronidase domain
6 6 1 1 SCOP 55481 N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
6 6 4 1 SCOP 48425 Sec7 domain
6 6 2 1 SCOP 88798 N-terminal, heterodimerisation domain of RBP7 (RpoE)
6 6 2 0 SCOP 47672 Transferrin receptor-like dimerisation domain
6 6 2 1 SCOP 64158 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
6 6 2 1 SCOP 81822 RuBisCo LSMT C-terminal, substrate-binding domain
6 6 3 0 SCOP 46942 Elongation factor TFIIS domain 2
6 6 4 0 SCOP 143503 PUG domain-like
6 6 5 0 SCOP 140996 Hermes dimerisation domain
6 6 5 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
6 6 4 0 SCOP 82615 Polo-box domain
6 6 1 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
6 6 4 0 SCOP 158230 PRP4-like
5 5 1 0 SCOP 161098 MetI-like
5 5 2 0 SCOP 53167 Purine and uridine phosphorylases
5 5 3 1 SCOP 53790 Tetrapyrrole methylase
5 5 2 1 SCOP 52166 Ribosomal protein L4
5 5 3 1 SCOP 64263 Prokaryotic ribosomal protein L17
5 5 1 1 SCOP 74731 Ribosomal protein L20
5 5 4 1 SCOP 52980 Restriction endonuclease-like
5 5 3 1 SCOP 55068 Peptide methionine sulfoxide reductase
5 5 2 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
5 5 3 1 SCOP 142695 RibA-like
5 5 1 1 SCOP 57798 Casein kinase II beta subunit
5 5 3 0 SCOP 54897 Protease propeptides/inhibitors
5 5 3 0 SCOP 50044 SH3-domain
5 5 2 0 SCOP 47694 Cytochrome c oxidase subunit h
5 5 1 1 SCOP 55770 Profilin (actin-binding protein)
5 5 1 2 SCOP 55909 Pentein
5 5 2 1 SCOP 81648 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
5 5 3 0 SCOP 47413 lambda repressor-like DNA-binding domains
5 5 3 1 SCOP 56524 Oxidoreductase molybdopterin-binding domain
5 5 4 1 SCOP 54447 ssDNA-binding transcriptional regulator domain
5 5 3 2 SCOP 54913 GlnB-like
5 5 2 0 SCOP 50952 Soluble quinoprotein glucose dehydrogenase
5 5 3 1 SCOP 48600 Chorismate mutase II
5 5 3 1 SCOP 158694 UraD-Like
5 5 3 0 SCOP 57802 Rubredoxin-like
5 5 2 0 SCOP 69786 YggU-like
5 5 2 1 SCOP 56726 DNA topoisomerase IV, alpha subunit
5 5 3 0 SCOP 160631 SMI1/KNR4-like
5 4 3 0 SCOP 50346 PRC-barrel domain
5 5 3 1 SCOP 111321 AF1104-like
5 5 2 0 SCOP 55287 RPB5-like RNA polymerase subunit
5 4 3 1 SCOP 55979 DNA clamp
5 5 3 0 SCOP 52200 Toll/Interleukin receptor TIR domain
5 5 2 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
5 5 2 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
5 5 5 0 SCOP 69304 Tricorn protease N-terminal domain
5 5 3 0 SCOP 63825 YWTD domain
5 5 2 1 SCOP 48537 Phospholipase C/P1 nuclease
5 5 2 1 SCOP 52009 Phosphohistidine domain
5 5 2 0 SCOP 47789 C-terminal domain of RNA polymerase alpha subunit
5 5 3 0 SCOP 52129 Caspase-like
5 5 1 0 SCOP 49265 Fibronectin type III
5 5 2 0 SCOP 160059 PriA/YqbF domain
5 5 3 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
5 3 2 1 SCOP 56042 PurM C-terminal domain-like
5 3 2 1 SCOP 55326 PurM N-terminal domain-like
5 5 4 0 SCOP 101576 Supernatant protein factor (SPF), C-terminal domain
5 5 2 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
5 5 5 0 SCOP 55271 DNA repair protein MutS, domain I
5 5 1 1 SCOP 101152 Mob1/phocein
5 5 2 1 SCOP 69000 FAD-dependent thiol oxidase
5 5 2 0 SCOP 47396 Transcription factor IIA (TFIIA), alpha-helical domain
5 5 1 0 SCOP 116846 MIT domain
5 5 3 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
5 5 2 0 SCOP 57277 Granulin repeat
5 5 2 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
5 5 3 1 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
5 5 2 1 SCOP 82215 C-terminal autoproteolytic domain of nucleoporin nup98
5 5 2 0 SCOP 50784 Transcription factor IIA (TFIIA), beta-barrel domain
5 5 2 0 SCOP 53036 Eukaryotic RPB5 N-terminal domain
5 5 4 0 SCOP 109715 DEK C-terminal domain
5 5 2 0 SCOP 55711 Subdomain of clathrin and coatomer appendage domain
5 5 1 0 SCOP 64586 C-terminal domain of ProRS
5 5 3 1 SCOP 54585 Cdc48 domain 2-like
5 5 2 0 SCOP 160219 AMPKBI-like
5 5 1 1 SCOP 49441 Cytochrome f, large domain
5 5 1 0 SCOP 103431 Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor
5 5 5 0 SCOP 53150 DNA repair protein MutS, domain II
5 5 4 0 SCOP 57770 Methionyl-tRNA synthetase (MetRS), Zn-domain
4 4 2 0 SCOP 46911 Ribosomal protein S18
4 4 2 1 SCOP 56420 Peptide deformylase
4 4 2 1 SCOP 53597 Dihydrofolate reductase-like
4 4 2 1 SCOP 55194 Ribosome recycling factor, RRF
4 4 3 0 SCOP 46561 Ribosomal protein L29 (L29p)
4 3 3 0 SCOP 54995 Ribosomal protein S6
4 4 3 1 SCOP 48613 Heme oxygenase-like
4 4 1 0 SCOP 140718 Mediator hinge subcomplex-like
4 4 2 0 SCOP 52499 Isochorismatase-like hydrolases
4 4 2 0 SCOP 55248 PCD-like
4 4 1 1 SCOP 69060 Arp2/3 complex 21 kDa subunit ARPC3
4 4 2 0 SCOP 103111 Activator of Hsp90 ATPase, Aha1
4 4 2 1 SCOP 81342 Transmembrane di-heme cytochromes
4 4 1 0 SCOP 161025 Photosystem II 10 kDa phosphoprotein PsbH
4 4 1 0 SCOP 161037 Photosystem II reaction center protein K, PsbK
4 4 1 0 SCOP 161055 PsbZ-like
4 4 1 0 SCOP 55718 SCP-like
4 4 1 1 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
4 4 1 0 SCOP 55331 Tautomerase/MIF
4 4 2 0 SCOP 82771 GIY-YIG endonuclease
4 4 1 0 SCOP 158615 RbcX-like
4 4 2 1 SCOP 50692 ADC-like
4 4 3 0 SCOP 55154 CYTH-like phosphatases
4 4 1 1 SCOP 56762 HydB/Nqo4-like
4 4 2 0 SCOP 143456 VC0467-like
4 4 2 0 SCOP 51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
4 4 2 0 SCOP 49472 Transthyretin (synonym: prealbumin)
4 4 2 0 SCOP 143437 THUMP domain-like
4 4 2 0 SCOP 48619 Phospholipase A2, PLA2
4 4 1 0 SCOP 102110 (2r)-phospho-3-sulfolactate synthase ComA
4 4 4 1 SCOP 142921 WGR domain-like
4 3 3 1 SCOP 51971 Nucleotide-binding domain
4 2 2 0 SCOP 53681 Aspartate/glutamate racemase
4 4 1 1 SCOP 52418 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
4 4 2 0 SCOP 47090 PGBD-like
4 4 3 0 SCOP 81891 Poly A polymerase C-terminal region-like
4 4 1 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
4 4 2 0 SCOP 143548 Serine metabolism enzymes domain
4 4 1 0 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
4 4 1 0 SCOP 90002 Hypothetical protein YjiA, C-terminal domain
4 4 1 0 SCOP 47648 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
4 4 1 0 SCOP 110921 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
4 4 1 0 SCOP 47794 Rad51 N-terminal domain-like
4 4 1 0 SCOP 82861 Mechanosensitive channel protein MscS (YggB), transmembrane region
4 4 1 0 SCOP 47933 ERP29 C domain-like
4 4 2 0 SCOP 102735 Trigger factor ribosome-binding domain
4 4 3 1 SCOP 47446 Signal peptide-binding domain
4 4 2 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
4 4 1 1 SCOP 89817 Mago nashi protein
4 4 1 1 SCOP 118359 Expressed protein At2g23090/F21P24.15
4 4 2 0 SCOP 47938 Functional domain of the splicing factor Prp18
4 4 1 1 SCOP 69012 alpha-ketoacid dehydrogenase kinase, N-terminal domain
4 4 2 0 SCOP 50911 Mannose 6-phosphate receptor domain
4 4 3 1 SCOP 51649 RuBisCo, C-terminal domain
4 4 3 1 SCOP 54966 RuBisCO, large subunit, small (N-terminal) domain
4 4 3 0 SCOP 75553 Smc hinge domain
4 4 3 0 SCOP 47040 Kix domain of CBP (creb binding protein)
4 4 2 1 SCOP 69340 C-terminal domain of adenylylcyclase associated protein
4 4 1 0 SCOP 81496 Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
4 4 2 0 SCOP 101821 Aminopeptidase/glucanase lid domain
4 4 4 1 SCOP 47587 Domain of poly(ADP-ribose) polymerase
3 3 3 0 SCOP 48013 NusB-like
3 3 2 1 SCOP 82549 DAK1/DegV-like
3 3 2 0 SCOP 54565 Ribosomal protein S16
3 3 2 1 SCOP 51730 FAD-linked oxidoreductase
3 3 2 1 SCOP 51713 tRNA-guanine transglycosylase
3 3 2 1 SCOP 55205 EPT/RTPC-like
3 2 2 1 SCOP 55298 YjgF-like
3 3 1 0 SCOP 117991 YbeD/HP0495-like
3 3 1 0 SCOP 54575 Ribosomal protein L31e
3 3 1 0 SCOP 81343 Fumarate reductase respiratory complex transmembrane subunits
3 3 1 0 SCOP 53032 tRNA-intron endonuclease catalytic domain-like
3 3 1 1 SCOP 55418 eIF4e-like
3 2 2 0 SCOP 46924 RNA polymerase subunit RPB10
3 3 1 0 SCOP 50090 Electron transport accessory proteins
3 3 1 1 SCOP 161045 Cytochrome b559 subunits
3 1 1 0 SCOP 49478 Cna protein B-type domain
3 3 1 0 SCOP 143243 Nqo5-like
3 3 1 1 SCOP 51717 Dihydropteroate synthetase-like
3 2 2 0 SCOP 46955 Putative DNA-binding domain
3 3 2 0 SCOP 142754 NadA-like
3 3 1 0 SCOP 55083 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
3 3 3 1 SCOP 64167 SurE-like
3 3 2 0 SCOP 158997 Trm112p-like
3 3 2 1 SCOP 53213 LigB-like
3 3 2 1 SCOP 55826 YbaK/ProRS associated domain
3 3 2 1 SCOP 101386 all-alpha NTP pyrophosphatases
3 3 2 1 SCOP 52335 Methylglyoxal synthase-like
3 3 2 1 SCOP 101473 DhaL-like
3 3 1 1 SCOP 51219 TRAP-like
3 3 1 0 SCOP 50939 Sialidases
3 3 2 0 SCOP 160104 Acetoacetate decarboxylase-like
3 3 2 0 SCOP 158710 PSPTO4464-like
3 3 1 0 SCOP 46950 Double-stranded DNA-binding domain
3 3 1 0 SCOP 142535 AF0625-like
3 3 2 1 SCOP 54984 eEF-1beta-like
3 3 1 0 SCOP 160374 RplX-like
3 3 1 1 SCOP 102462 Peptidyl-tRNA hydrolase II
3 2 2 1 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
3 3 3 1 SCOP 69336 Alpha subunit of glutamate synthase, C-terminal domain
3 3 1 1 SCOP 82114 Riboflavin kinase-like
3 3 2 1 SCOP 56719 Type II DNA topoisomerase
3 3 1 0 SCOP 81336 F1F0 ATP synthase subunit A
3 3 2 0 SCOP 55658 L9 N-domain-like
3 3 1 0 SCOP 158745 LanC-like
3 3 2 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
3 3 1 0 SCOP 75704 Mitotic arrest deficient-like 1, Mad1
3 3 1 1 SCOP 63999 Thiamin pyrophosphokinase, catalytic domain
3 3 2 0 SCOP 141673 MOSC N-terminal domain-like
3 3 1 1 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
3 3 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
3 3 3 0 SCOP 117289 Nucleoporin domain
3 3 1 0 SCOP 81624 N-terminal domain of MutM-like DNA repair proteins
3 2 2 0 SCOP 55550 SH2 domain
3 3 2 0 SCOP 54752 RecA protein, C-terminal domain
3 3 1 0 SCOP 54782 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
3 3 2 0 SCOP 55904 Ornithine decarboxylase C-terminal domain
3 3 2 1 SCOP 56542 Substrate-binding domain of HMG-CoA reductase
3 3 2 0 SCOP 81531 Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
3 3 2 0 SCOP 48340 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
3 3 2 0 SCOP 103107 Hypothetical protein c14orf129, hspc210
3 3 2 0 SCOP 47050 VHP, Villin headpiece domain
3 3 2 1 SCOP 101233 PWI domain
3 2 2 1 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
3 3 2 1 SCOP 117018 ATP-dependent DNA ligase DNA-binding domain
3 3 1 0 SCOP 160527 V-type ATPase subunit E-like
3 3 2 0 SCOP 159065 Dom34/Pelota N-terminal domain-like
3 3 1 0 SCOP 63862 Thiamin pyrophosphokinase, substrate-binding domain
3 3 2 0 SCOP 160897 Taf5 N-terminal domain-like
3 3 1 0 SCOP 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain
3 3 3 0 SCOP 143517 TRCF domain-like
3 3 2 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
3 2 2 1 SCOP 81767 Pre-protein crosslinking domain of SecA
3 3 1 0 SCOP 101224 HAND domain of the nucleosome remodeling ATPase ISWI
3 3 2 0 SCOP 160996 HI0933 insert domain-like
2 2 1 0 SCOP 143034 L35p-like
2 2 1 1 SCOP 55831 Thymidylate synthase/dCMP hydroxymethylase
2 2 1 0 SCOP 141091 L21p-like
2 2 1 1 SCOP 51658 Xylose isomerase-like
2 2 1 0 SCOP 46992 Ribosomal protein S20
2 2 2 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
2 2 1 0 SCOP 54285 MoaD/ThiS
2 2 1 0 SCOP 48140 Ribosomal protein L19 (L19e)
2 1 1 0 SCOP 55469 FMN-dependent nitroreductase-like
2 2 2 0 SCOP 54762 Signal recognition particle alu RNA binding heterodimer, SRP9/14
2 2 1 0 SCOP 142897 TFB5-like
2 2 1 0 SCOP 103456 Preprotein translocase SecE subunit
2 2 1 0 SCOP 144210 Nop10-like SnoRNP
2 2 1 0 SCOP 89895 FYSH domain
2 2 1 2 SCOP 90096 Subunits of heterodimeric actin filament capping protein Capz
2 2 1 0 SCOP 69103 Arp2/3 complex 16 kDa subunit ARPC5
2 2 1 0 SCOP 51645 Malate synthase G
2 2 2 0 SCOP 81508 Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
2 2 1 0 SCOP 48662 Ribosomal protein L39e
2 2 1 1 SCOP 118203 Vacuolar ATP synthase subunit C
2 2 1 0 SCOP 69618 HemD-like
2 2 2 0 SCOP 143447 AMMECR1-like
2 2 2 1 SCOP 101960 Stabilizer of iron transporter SufD
2 2 1 1 SCOP 57662 Ferredoxin thioredoxin reductase (FTR), catalytic beta chain
2 2 1 1 SCOP 81536 Subunit III of photosystem I reaction centre, PsaF
2 2 2 0 SCOP 81563 Photosystem I reaction center subunit X, PsaK
2 2 2 1 SCOP 81568 Photosystem I reaction center subunit XI, PsaL
2 2 2 1 SCOP 101546 ASF1-like
2 2 2 0 SCOP 111038 YjbQ-like
2 2 1 1 SCOP 55040 Molybdenum cofactor biosynthesis protein C, MoaC
2 2 1 0 SCOP 56601 beta-lactamase/transpeptidase-like
2 2 1 1 SCOP 51998 PFL-like glycyl radical enzymes
2 2 1 1 SCOP 56266 DmpA/ArgJ-like
2 2 1 0 SCOP 82697 PurS-like
2 2 1 0 SCOP 53807 "Helical backbone" metal receptor
2 2 1 0 SCOP 101744 Rof/RNase P subunit-like
2 2 1 0 SCOP 103441 PetM subunit of the cytochrome b6f complex
2 2 1 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
2 2 2 0 SCOP 159501 EreA/ChaN-like
2 2 1 0 SCOP 140663 TTHA0068-like
2 2 1 0 SCOP 55200 Translation initiation factor IF3, C-terminal domain
2 2 1 0 SCOP 54975 Acylphosphatase/BLUF domain-like
2 2 1 1 SCOP 51391 Thiamin phosphate synthase
2 2 1 0 SCOP 89095 GatB/YqeY motif
2 2 1 0 SCOP 110916 Peptidyl-tRNA hydrolase domain-like
2 2 2 1 SCOP 103025 Folate-binding domain
2 2 2 0 SCOP 56747 Prim-pol domain
2 2 1 1 SCOP 110581 Indigoidine synthase A-like
2 2 1 0 SCOP 56821 Prismane protein-like
2 2 2 1 SCOP 50486 FMT C-terminal domain-like
2 2 1 0 SCOP 64076 MTH938-like
2 2 1 1 SCOP 56925 OMPA-like
2 2 1 0 SCOP 69754 Ribosome binding protein Y (YfiA homologue)
2 2 1 0 SCOP 48695 Multiheme cytochromes
2 2 2 1 SCOP 100939 SPOC domain-like
2 2 1 1 SCOP 74784 Translin
2 2 2 0 SCOP 160350 Rnp2-like
2 2 1 0 SCOP 116820 Rps17e-like
2 2 1 0 SCOP 69695 SRP19
2 2 1 0 SCOP 63867 MoeA C-terminal domain-like
2 1 1 0 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
2 2 1 0 SCOP 143865 CorA soluble domain-like
2 2 1 0 SCOP 141255 YccV-like
2 2 1 1 SCOP 102645 CoaB-like
2 2 2 0 SCOP 118116 DNA mismatch repair protein MutL
2 2 1 0 SCOP 56436 C-type lectin-like
2 2 2 0 SCOP 56037 PheT/TilS domain
2 2 1 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
2 2 1 1 SCOP 110111 Ctag/Cox11
2 2 1 0 SCOP 81585 PsbU/PolX domain-like
2 2 1 1 SCOP 110019 ERO1-like
2 2 1 0 SCOP 68912 Rho N-terminal domain-like
2 2 2 1 SCOP 53920 Fe-only hydrogenase
2 2 1 0 SCOP 101278 N-terminal domain of adenylylcyclase associated protein, CAP
2 2 2 0 SCOP 141259 CarD-like
2 2 2 0 SCOP 74924 Cap-Gly domain
2 2 1 0 SCOP 116742 eIF2alpha middle domain-like
2 1 1 0 SCOP 50923 Hemopexin-like domain
2 2 1 1 SCOP 82109 MIR domain
2 2 1 1 SCOP 143875 ERH-like
2 2 2 0 SCOP 143791 DUSP-like
2 2 2 1 SCOP 50386 STI-like
2 2 1 1 SCOP 109920 Hypothetical protein At3g22680
2 2 1 1 SCOP 110993 eIF-2-alpha, C-terminal domain
2 2 2 0 SCOP 102848 NSFL1 (p97 ATPase) cofactor p47, SEP domain
2 2 1 0 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
2 2 1 1 SCOP 50989 Clathrin heavy-chain terminal domain
2 2 2 1 SCOP 81886 Helical scaffold and wing domains of SecA
2 2 1 0 SCOP 54556 Chitinase insertion domain
2 2 2 0 SCOP 82895 TSP-1 type 1 repeat
2 2 1 0 SCOP 47031 Second domain of FERM
2 2 2 0 SCOP 140612 EB1 dimerisation domain-like
2 2 1 0 SCOP 55653 Ribosomal protein L9 C-domain
2 2 1 1 SCOP 55035 NAD-binding domain of HMG-CoA reductase
2 2 2 0 SCOP 144256 TSP9-like
2 2 1 0 SCOP 81502 ISP transmembrane anchor
2 2 1 1 SCOP 63433 Fumarylacetoacetate hydrolase, FAH, N-terminal domain
2 2 1 0 SCOP 54364 Translation initiation factor IF3, N-terminal domain
2 2 1 0 SCOP 47802 DNA polymerase beta, N-terminal domain-like
2 2 1 0 SCOP 81799 Putative methyltransferase TM0872, insert domain
2 2 1 0 SCOP 109728 Hypothetical protein AF0491, middle domain
2 2 1 0 SCOP 109736 FGAM synthase PurL, linker domain
1 1 1 0 SCOP 56731 DNA primase core
1 1 1 1 SCOP 52141 Uracil-DNA glycosylase-like
1 1 1 0 SCOP 82607 YbaB-like
1 1 1 0 SCOP 89919 Ribosome-binding factor A, RbfA
1 1 1 0 SCOP 57840 Ribosomal protein L36
1 1 1 0 SCOP 64182 DHH phosphoesterases
1 1 1 1 SCOP 75625 YebC-like
1 1 1 0 SCOP 109998 Triger factor/SurA peptide-binding domain-like
1 1 1 0 SCOP 89623 Ribose/Galactose isomerase RpiB/AlsB
1 1 1 1 SCOP 69765 IpsF-like
1 1 1 1 SCOP 103263 Chorismate synthase, AroC
1 1 1 1 SCOP 51283 dUTPase-like
1 1 1 0 SCOP 54060 His-Me finger endonucleases
1 1 1 1 SCOP 52121 Lumazine synthase
1 1 1 1 SCOP 56796 Dehydroquinate synthase-like
1 1 1 1 SCOP 55387 Frataxin/Nqo15-like
1 1 1 0 SCOP 81321 Family A G protein-coupled receptor-like
1 1 1 1 SCOP 69500 DTD-like
1 1 1 1 SCOP 102886 Coproporphyrinogen III oxidase
1 1 1 0 SCOP 111278 SSo0622-like
1 1 1 0 SCOP 81411 Mitochondrial cytochrome c oxidase subunit VIa
1 1 1 0 SCOP 159468 AtpF-like
1 1 1 0 SCOP 81514 Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 53639 AraD/HMP-PK domain-like
1 1 1 0 SCOP 140959 Indolic compounds 2,3-dioxygenase-like
1 1 1 0 SCOP 110849 ParB/Sulfiredoxin
1 1 1 0 SCOP 103486 V-type ATP synthase subunit C
1 1 1 0 SCOP 143870 PF0523-like
1 1 1 1 SCOP 64153 YjeF N-terminal domain-like
1 1 1 0 SCOP 46988 Tubulin chaperone cofactor A
1 1 1 0 SCOP 48690 Epsilon subunit of mitochondrial F1F0-ATP synthase
1 1 1 1 SCOP 52788 Phosphotyrosine protein phosphatases I
1 1 1 1 SCOP 81442 Cytochrome c oxidase subunit I-like
1 1 1 0 SCOP 141734 HisI-like
1 1 1 1 SCOP 64234 Photosystem I subunit PsaD
1 1 1 0 SCOP 161084 MAPEG domain-like
1 1 1 0 SCOP 103642 Sec-C motif
1 1 1 1 SCOP 118196 YaeB-like
1 1 1 0 SCOP 58100 Bacterial hemolysins
1 1 1 1 SCOP 56349 DNA breaking-rejoining enzymes
1 1 1 0 SCOP 54690 Molybdopterin synthase subunit MoaE
1 1 1 0 SCOP 141000 Glu-tRNAGln amidotransferase C subunit
1 1 1 0 SCOP 54111 Urease, gamma-subunit
1 1 1 1 SCOP 51278 Urease, beta-subunit
1 1 1 0 SCOP 143081 BB1717-like
1 1 1 0 SCOP 109910 YgfY-like
1 1 1 0 SCOP 102588 LmbE-like
1 1 1 1 SCOP 160909 ATP12-like
1 1 1 0 SCOP 142338 CofD-like
1 1 1 0 SCOP 141130 Acetamidase/Formamidase-like
1 1 1 0 SCOP 142764 YgbK-like
1 1 1 0 SCOP 69349 Phage fibre proteins
1 1 1 0 SCOP 158832 Tex N-terminal region-like
1 1 1 0 SCOP 53706 Formate dehydrogenase/DMSO reductase, domains 1-3
1 1 1 0 SCOP 50960 TolB, C-terminal domain
1 1 1 0 SCOP 82093 Heme chaperone CcmE
1 1 1 0 SCOP 69318 Integrin alpha N-terminal domain
1 1 1 0 SCOP 55608 Homing endonucleases
1 1 1 0 SCOP 49344 CBD9-like
1 1 1 0 SCOP 55234 Cyanase C-terminal domain
1 1 1 1 SCOP 142877 EndoU-like
1 1 1 0 SCOP 49464 Carboxypeptidase regulatory domain-like
1 1 1 0 SCOP 144206 NOB1 zinc finger-like
1 1 1 0 SCOP 82679 N-utilization substance G protein NusG, N-terminal domain
1 1 1 0 SCOP 116726 TrkA C-terminal domain-like
1 1 1 0 SCOP 69055 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
1 1 1 0 SCOP 58022 XRCC4, C-terminal oligomerization domain
1 1 1 0 SCOP 142984 Nqo1 middle domain-like
1 1 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
1 1 1 0 SCOP 51120 beta-Roll
1 1 1 1 SCOP 54810 GMP synthetase C-terminal dimerisation domain
1 1 1 1 SCOP 140869 GUN4-like
1 1 1 0 SCOP 161270 PspA lactotransferrin-binding region
1 1 1 0 SCOP 47144 HSC20 (HSCB), C-terminal oligomerisation domain
1 1 1 0 SCOP 110836 Hypothetical protein SAV1430
1 1 1 0 SCOP 63418 MurE/MurF N-terminal domain
1 1 1 0 SCOP 90112 Neurotransmitter-gated ion-channel transmembrane pore
1 1 1 0 SCOP 69075 Glutamyl tRNA-reductase dimerization domain
1 1 1 1 SCOP 55637 Cell cycle regulatory proteins
1 1 1 0 SCOP 140860 Pseudo ankyrin repeat-like
1 1 1 0 SCOP 75420 YhbC-like, N-terminal domain
1 1 1 0 SCOP 140490 Nqo1C-terminal domain-like
1 1 1 1 SCOP 141493 Allene oxide cyclase-like
1 1 1 1 SCOP 143975 IlvD/EDD N-terminal domain-like
1 1 1 0 SCOP 54991 Anticodon-binding domain of PheRS
1 1 1 0 SCOP 110221 AbfB domain
1 1 1 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
1 1 1 1 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
1 1 1 0 SCOP 57845 B-box zinc-binding domain
1 1 1 0 SCOP 48508 Nuclear receptor ligand-binding domain
1 1 1 1 SCOP 140984 PTPA-like
1 1 1 0 SCOP 161065 ATP synthase D chain-like
1 1 1 1 SCOP 140102 ISY1 domain-like
1 1 1 0 SCOP 140106 Calcyclin-binding protein-like
1 1 1 0 SCOP 140864 TROVE domain-like
1 1 1 0 SCOP 140856 USP8 N-terminal domain-like
1 1 1 1 SCOP 142019 Nqo1 FMN-binding domain-like
1 1 1 0 SCOP 55261 GAD domain-like
1 1 1 0 SCOP 88645 ssDNA viruses
1 1 1 0 SCOP 100897 Plant proteinase inhibitors
1 1 1 0 SCOP 69742 Glutamyl tRNA-reductase catalytic, N-terminal domain
1 1 1 0 SCOP 82931 Tumor suppressor gene product Apc
1 1 1 0 SCOP 140427 VPS28 C-terminal domain-like
1 1 1 0 SCOP 81872 BRCA2 helical domain
1 1 1 0 SCOP 101931 Pym (Within the bgcn gene intron protein, WIBG), N-terminal domain
1 1 1 0 SCOP 88802 Pre-PUA domain
1 1 1 1 SCOP 56741 Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
1 1 1 0 SCOP 49758 Calpain large subunit, middle domain (domain III)
1 1 1 0 SCOP 101420 C-terminal domain of Ku80
1 1 1 0 SCOP 140586 Dcp2 domain-like
1 1 1 0 SCOP 101790 Aminomethyltransferase beta-barrel domain
1 1 1 0 SCOP 102741 Obg GTP-binding protein C-terminal domain
1 1 1 0 SCOP 47055 TAF(II)230 TBP-binding fragment
1 1 1 0 SCOP 81878 BRCA2 tower domain

Jump to [ Top of page · Assignment statistics ]


The following superfamilies have one or more weak hits:

SCOP superfamily Troponin coil-coiled subunits
SCOP superfamily Dimerization motif of sir4
SCOP superfamily Somatomedin B domain
SCOP superfamily GCM domain
SCOP superfamily DNA-binding protein Tfx
SCOP superfamily Doublecortin (DC)
SCOP superfamily CoA-transferase family III (CaiB/BaiF)
SCOP superfamily L-sulfolactate dehydrogenase-like
SCOP superfamily Fucose-specific lectin
SCOP superfamily Collagen-binding domain
SCOP superfamily Gametocyte protein Pfg27
SCOP superfamily TorD-like
SCOP superfamily Antibiotic binding domain of TipA-like multidrug resistance regulators
SCOP superfamily Soluble domain of poliovirus core protein 3a
SCOP superfamily post-HMGL domain-like
SCOP superfamily Receptor-binding domain of short tail fibre protein gp12
SCOP superfamily Positive stranded ssRNA viruses
SCOP superfamily Apolipoprotein A-II
SCOP superfamily Apical membrane antigen 1
SCOP superfamily MesJ substrate recognition domain-like
SCOP superfamily OsmC-like
SCOP superfamily Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
SCOP superfamily GckA/TtuD-like
SCOP superfamily Swiveling domain of dehydratase reactivase alpha subunit
SCOP superfamily BAH domain
SCOP superfamily N-terminal domain of bifunctional PutA protein
SCOP superfamily Family 10 polysaccharide lyase
SCOP superfamily C-terminal domain of DFF45/ICAD (DFF-C domain)
SCOP superfamily Crustacean CHH/MIH/GIH neurohormone
SCOP superfamily Group V grass pollen allergen
SCOP superfamily Plasmid maintenance system epsilon/zeta, antidote epsilon subunit
SCOP superfamily Protein serine/threonine phosphatase 2C, C-terminal domain
SCOP superfamily F1F0 ATP synthase subunit B, membrane domain
SCOP superfamily Cytochrome c oxidase subunit III-like
SCOP superfamily Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
SCOP superfamily Mitochondrial cytochrome c oxidase subunit VIc
SCOP superfamily ABC transporter involved in vitamin B12 uptake, BtuC
SCOP superfamily Gated mechanosensitive channel
SCOP superfamily Small-conductance potassium channel
SCOP superfamily C-terminal domain of mollusc hemocyanin
SCOP superfamily H-NS histone-like proteins
SCOP superfamily Rad50 coiled-coil Zn hook
SCOP superfamily Siroheme synthase middle domains-like
SCOP superfamily Rotavirus NSP2 fragment, C-terminal domain
SCOP superfamily Hypothetical protein MTH777 (MT0777)
SCOP superfamily HprK N-terminal domain-like
SCOP superfamily Monomethylamine methyltransferase MtmB
SCOP superfamily Dipeptidyl peptidase I (cathepsin C), exclusion domain
SCOP superfamily V-region of surface antigen I/II (SA I/II, PAC)
SCOP superfamily Major surface antigen p30, SAG1
SCOP superfamily Lamin A/C globular tail domain
SCOP superfamily Variable surface antigen VlsE
SCOP superfamily TolA/TonB C-terminal domain
SCOP superfamily C-terminal domain of PLC-beta
SCOP superfamily Colicin E3 receptor domain
SCOP superfamily Head and neck region of the ectodomain of NDV fusion glycoprotein
SCOP superfamily Membrane penetration protein mu1
SCOP superfamily Thymidylate synthase-complementing protein Thy1
SCOP superfamily Urease metallochaperone UreE, C-terminal domain
SCOP superfamily Transcription factor NusA, N-terminal domain
SCOP superfamily Type III secretory system chaperone-like
SCOP superfamily Cloacin translocation domain
SCOP superfamily Cell wall binding repeat
SCOP superfamily gp5 N-terminal domain-like
SCOP superfamily Nucleoplasmin-like core domain
SCOP superfamily Penicillin-binding protein associated domain
SCOP superfamily Nuclear receptor coactivator interlocking domain
SCOP superfamily AhpD-like
SCOP superfamily Hypothetical protein YjbJ
SCOP superfamily Intermediate filament protein, coiled coil region
SCOP superfamily Phase 1 flagellin
SCOP superfamily YopH tyrosine phosphatase N-terminal domain
SCOP superfamily CNF1/YfiH-like putative cysteine hydrolases
SCOP superfamily Hsp33 domain
SCOP superfamily Cell-division protein ZipA, C-terminal domain
SCOP superfamily Chorismate lyase-like
SCOP superfamily Dipeptide transport protein
SCOP superfamily MoeA N-terminal region -like
SCOP superfamily Methuselah ectodomain
SCOP superfamily Cell-division inhibitor MinC, C-terminal domain
SCOP superfamily Sortase
SCOP superfamily SAND domain-like
SCOP superfamily Ganglioside M2 (gm2) activator
SCOP superfamily Telomeric repeat binding factor (TRF) dimerisation domain
SCOP superfamily Outer surface protein C (OspC)
SCOP superfamily Frizzled cysteine-rich domain
SCOP superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain
SCOP superfamily Variant surface glycoprotein (N-terminal domain)
SCOP superfamily Virus ectodomain
SCOP superfamily Influenza hemagglutinin (stalk)
SCOP superfamily N-terminal coiled coil domain from apc
SCOP superfamily Outer membrane lipoprotein
SCOP superfamily Delta-sleep-inducing peptide immunoreactive peptide
SCOP superfamily Coiled-coil dimerization domain from cortexillin I
SCOP superfamily Fibrinogen coiled-coil and central regions
SCOP superfamily Inovirus (filamentous phage) major coat protein
SCOP superfamily Inhibitor of apoptosis (IAP) repeat
SCOP superfamily Ada DNA repair protein, N-terminal domain (N-Ada 10)
SCOP superfamily Zinc domain conserved in yeast copper-regulated transcription factors
SCOP superfamily Metallothionein
SCOP superfamily Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
SCOP superfamily Hypothetical protein MTH1184
SCOP superfamily Zn2/Cys6 DNA-binding domain
SCOP superfamily HIPIP (high potential iron protein)
SCOP superfamily Carboxypeptidase inhibitor
SCOP superfamily Thyroglobulin type-1 domain
SCOP superfamily Serine protease inhibitors
SCOP superfamily Cystine-knot cytokines
SCOP superfamily LDL receptor-like module
SCOP superfamily Neurotoxin III (ATX III)
SCOP superfamily Agouti-related protein
SCOP superfamily Insulin-like
SCOP superfamily Viral glycoprotein, central and dimerisation domains
SCOP superfamily Lipovitellin-phosvitin complex; beta-sheet shell regions
SCOP superfamily Outer membrane efflux proteins (OEP)
SCOP superfamily Porins
SCOP superfamily Outer membrane phospholipase A (OMPLA)
SCOP superfamily Diphtheria toxin, middle domain
SCOP superfamily Upper collar protein gp10 (connector protein)
SCOP superfamily Replication terminator protein (Tus)
SCOP superfamily Conserved core of transcriptional regulatory protein vp16
SCOP superfamily Nitric oxide (NO) synthase oxygenase domain
SCOP superfamily SMAD MH1 domain
SCOP superfamily Nitrile hydratase alpha chain
SCOP superfamily Methenyltetrahydromethanopterin cyclohydrolase
SCOP superfamily CytB endotoxin-like
SCOP superfamily beta-lactamase-inhibitor protein, BLIP
SCOP superfamily Origin of replication-binding domain, RBD-like
SCOP superfamily Subtilisin inhibitor
SCOP superfamily tRNA-intron endonuclease N-terminal domain-like
SCOP superfamily Yeast killer toxins
SCOP superfamily Pepsin inhibitor-3
SCOP superfamily Formylmethanofuran:tetrahydromethanopterin formyltransferase
SCOP superfamily Pyrimidine nucleoside phosphorylase C-terminal domain
SCOP superfamily SecB-like
SCOP superfamily Pili subunits
SCOP superfamily MHC antigen-recognition domain
SCOP superfamily Superantigen toxins, C-terminal domain
SCOP superfamily Interleukin 8-like chemokines
SCOP superfamily Glutaminase/Asparaginase
SCOP superfamily FucI/AraA N-terminal and middle domains
SCOP superfamily Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
SCOP superfamily HybD-like
SCOP superfamily Resolvase-like
SCOP superfamily TolB, N-terminal domain
SCOP superfamily Methylesterase CheB, C-terminal domain
SCOP superfamily Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
SCOP superfamily N-(deoxy)ribosyltransferase-like
SCOP superfamily Barstar-related
SCOP superfamily MurCD N-terminal domain
SCOP superfamily Cobalamin (vitamin B12)-dependent enzymes
SCOP superfamily Bacterial luciferase-like
SCOP superfamily Hedgehog/intein (Hint) domain
SCOP superfamily Duplicated hybrid motif
SCOP superfamily Fibre shaft of virus attachment proteins
SCOP superfamily An insect antifreeze protein
SCOP superfamily Outer surface protein
SCOP superfamily Nitrous oxide reductase, N-terminal domain
SCOP superfamily Thermostable phytase (3-phytase)
SCOP superfamily D-aminopeptidase, middle and C-terminal domains
SCOP superfamily beta-Barrel protease inhibitors
SCOP superfamily XRCC4, N-terminal domain
SCOP superfamily Herpes virus serine proteinase, assemblin
SCOP superfamily FucI/AraA C-terminal domain-like
SCOP superfamily DNA-binding domain of retroviral integrase
SCOP superfamily Cell growth inhibitor/plasmid maintenance toxic component
SCOP superfamily EV matrix protein
SCOP superfamily Baculovirus p35 protein
SCOP superfamily Spermadhesin, CUB domain
SCOP superfamily ENV polyprotein, receptor-binding domain
SCOP superfamily Viral protein domain
SCOP superfamily Group II dsDNA viruses VP
SCOP superfamily PHM/PNGase F
SCOP superfamily gamma-Crystallin-like
SCOP superfamily Neurophysin II
SCOP superfamily Rab geranylgeranyltransferase alpha-subunit, insert domain
SCOP superfamily Aromatic compound dioxygenase
SCOP superfamily VHL
SCOP superfamily p53-like transcription factors
SCOP superfamily Alpha-macroglobulin receptor domain
SCOP superfamily Bacterial adhesins
SCOP superfamily Carbohydrate-binding domain
SCOP superfamily Actinoxanthin-like
SCOP superfamily Transglutaminase, two C-terminal domains
SCOP superfamily PKD domain
SCOP superfamily Moesin tail domain
SCOP superfamily Tetraspanin
SCOP superfamily Fungal elicitin
SCOP superfamily Serum albumin-like
SCOP superfamily Tetracyclin repressor-like, C-terminal domain
SCOP superfamily Cytochrome c oxidase subunit E
SCOP superfamily Bacterial muramidases
SCOP superfamily Lipovitellin-phosvitin complex, superhelical domain
SCOP superfamily Ras GEF
SCOP superfamily A virus capsid protein alpha-helical domain
SCOP superfamily TrpR-like
SCOP superfamily Chondroitin AC/alginate lyase
SCOP superfamily Regulator of G-protein signaling, RGS
SCOP superfamily Transcription factor STAT-4 N-domain
SCOP superfamily Methyl-coenzyme M reductase alpha and beta chain C-terminal domain
SCOP superfamily DBL homology domain (DH-domain)
SCOP superfamily Scaffolding protein gpD of bacteriophage procapsid
SCOP superfamily FliG
SCOP superfamily GntR ligand-binding domain-like
SCOP superfamily Retrovirus capsid protein, N-terminal core domain
SCOP superfamily Bacteriocin AS-48
SCOP superfamily Apolipophorin-III
SCOP superfamily Retroviral matrix proteins
SCOP superfamily Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
SCOP superfamily lambda integrase-like, N-terminal domain
SCOP superfamily Domain of early E2A DNA-binding protein, ADDBP
SCOP superfamily Anaphylotoxins (complement system)
SCOP superfamily STAT
SCOP superfamily Insect pheromone/odorant-binding proteins
SCOP superfamily Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
SCOP superfamily Retrovirus capsid dimerization domain-like
SCOP superfamily Colicin E immunity proteins
SCOP superfamily alpha-catenin/vinculin-like
SCOP superfamily TMV-like viral coat proteins
SCOP superfamily Hemerythrin-like
SCOP superfamily Cytochromes
SCOP superfamily Aspartate receptor, ligand-binding domain
SCOP superfamily Apolipoprotein
SCOP superfamily Mitochondrial import receptor subunit Tom20
SCOP superfamily Diol dehydratase, gamma subunit
SCOP superfamily T4 endonuclease V
SCOP superfamily RAP domain-like
SCOP superfamily Smac/diablo
SCOP superfamily Enzyme IIa from lactose specific PTS, IIa-lac
SCOP superfamily Spectrin repeat
SCOP superfamily N-terminal Zn binding domain of HIV integrase
SCOP superfamily Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
SCOP superfamily Epsilon subunit of F1F0-ATP synthase C-terminal domain
SCOP superfamily C-terminal UvrC-binding domain of UvrB
SCOP superfamily HR1 repeat
SCOP superfamily GreA transcript cleavage protein, N-terminal domain
SCOP superfamily Gam-like
SCOP superfamily RILP dimerisation region
SCOP superfamily E6 C-terminal domain-like
SCOP superfamily VhTI-like
SCOP superfamily MgtE membrane domain-like
SCOP superfamily SNF-like
SCOP superfamily flu NP-like
SCOP superfamily CV3147-like
SCOP superfamily MalF N-terminal region-like
SCOP superfamily PH0156-like
SCOP superfamily Api92-like
SCOP superfamily FlhC-like
SCOP superfamily PG1388-like
SCOP superfamily Jann2411-like
SCOP superfamily Rv2827c C-terminal domain-like
SCOP superfamily YehR-like
SCOP superfamily MbtH-like
SCOP superfamily BB2672-like
SCOP superfamily BRK domain-like
SCOP superfamily PA1123-like
SCOP superfamily BLRF2-like
SCOP superfamily BH3703-like
SCOP superfamily YdfO-like
SCOP superfamily NosL/MerB-like
SCOP superfamily Bacterial polysaccharide co-polymerase-like
SCOP superfamily FlaG-like
SCOP superfamily NMB0488-like
SCOP superfamily YcgL-like
SCOP superfamily PrpR receptor domain-like
SCOP superfamily CdCA1 repeat-like
SCOP superfamily Dhaf3308-like
SCOP superfamily Cgl1923-like
SCOP superfamily TBP-interacting protein-like
SCOP superfamily XCC0632-like
SCOP superfamily AttH-like
SCOP superfamily YorP-like
SCOP superfamily NEAT domain-like
SCOP superfamily Lipase chaperone-like
SCOP superfamily MgtE N-terminal domain-like
SCOP superfamily SMc04008-like
SCOP superfamily MG296-like
SCOP superfamily TerB-like
SCOP superfamily RPA2825-like
SCOP superfamily YheA/YmcA-like
SCOP superfamily AF1862-like
SCOP superfamily FLJ32549 domain-like
SCOP superfamily Orange domain-like
SCOP superfamily IVS-encoded protein-like
SCOP superfamily HP0062-like
SCOP superfamily SOCS box-like
SCOP superfamily occludin/ELL-like
SCOP superfamily Sec2 N-terminal region
SCOP superfamily MPN010-like
SCOP superfamily Coronavirus NSP10-like
SCOP superfamily Vanabin-like
SCOP superfamily ImpE-like
SCOP superfamily FdhE-like
SCOP superfamily CofE-like
SCOP superfamily AF2331-like
SCOP superfamily XisI-like
SCOP superfamily Phage tail protein-like
SCOP superfamily GlcG-like
SCOP superfamily YeeU-like
SCOP superfamily PHP14-like
SCOP superfamily ApbE-like
SCOP superfamily FwdE-like
SCOP superfamily TM1622-like
SCOP superfamily Transposase IS200-like
SCOP superfamily Rv2632c-like
SCOP superfamily ComB-like
SCOP superfamily CAC2185-like
SCOP superfamily CinA-like
SCOP superfamily EAL domain-like
SCOP superfamily MFPT repeat-like
SCOP superfamily FimD N-terminal domain-like
SCOP superfamily AF2212/PG0164-like
SCOP superfamily Bacteriophage trimeric proteins domain
SCOP superfamily PTSIIA/GutA-like
SCOP superfamily YdhA-like
SCOP superfamily Extracellular hemoglobin linker subunit, receptor domain
SCOP superfamily NfeD domain-like
SCOP superfamily Atu1913-like
SCOP superfamily Agglutinin HPA-like
SCOP superfamily CalX-like
SCOP superfamily Duffy binding domain-like
SCOP superfamily PriB N-terminal domain-like
SCOP superfamily Rhabdovirus nucleoprotein-like
SCOP superfamily YidB-like
SCOP superfamily SipA N-terminal domain-like
SCOP superfamily RUN domain-like
SCOP superfamily IpaD-like
SCOP superfamily Hyaluronidase post-catalytic domain-like
SCOP superfamily YozE-like
SCOP superfamily Type III secretion system domain
SCOP superfamily MukF C-terminal domain-like
SCOP superfamily FlgN-like
SCOP superfamily TM0693-like
SCOP superfamily BAS1536-like
SCOP superfamily LemA-like
SCOP superfamily PE/PPE dimer-like
SCOP superfamily EsxAB dimer-like
SCOP superfamily MW0975(SA0943)-like
SCOP superfamily YppE-like
SCOP superfamily Vng1086c-like
SCOP superfamily MIT domain-like
SCOP superfamily MxiH-like
SCOP superfamily Rabenosyn-5 Rab-binding domain-like
SCOP superfamily HSP33 redox switch-like
SCOP superfamily Variant surface glycoprotein MITAT 1.2, VSG 221, C-terminal domain
SCOP superfamily Connexin43
SCOP superfamily Proton glutamate symport protein
SCOP superfamily Viral ssDNA binding protein
SCOP superfamily WWE domain
SCOP superfamily TM1631-like
SCOP superfamily Flagellar hook protein flgE
SCOP superfamily Hypothetical protein PA1324
SCOP superfamily DNA primase DnaG, C-terminal domain
SCOP superfamily Hypothetical protein MPN330
SCOP superfamily RNA-binding protein She2p
SCOP superfamily EspA/CesA-like
SCOP superfamily TrmE connector domain
SCOP superfamily XseB-like
SCOP superfamily Fzo-like conserved region
SCOP superfamily Coronavirus S2 glycoprotein
SCOP superfamily Geminin coiled-coil domain
SCOP superfamily YAP1 redox domain
SCOP superfamily Resistin
SCOP superfamily OmpH-like
SCOP superfamily VP4 membrane interaction domain
SCOP superfamily HlyD-like secretion proteins
SCOP superfamily CbiD-like
SCOP superfamily Urocanase
SCOP superfamily Recombination protein RecR
SCOP superfamily Sulfolobus fructose-1,6-bisphosphatase-like
SCOP superfamily YggX-like
SCOP superfamily TmoB-like
SCOP superfamily Glycerate kinase I
SCOP superfamily ThiG-like
SCOP superfamily Coronavirus RNA-binding domain
SCOP superfamily Oligoxyloglucan reducing end-specific cellobiohydrolase
SCOP superfamily DNA-binding protein LAG-1 (CSL)
SCOP superfamily GDNF receptor-like
SCOP superfamily Hypothetical protein MG354
SCOP superfamily I/LWEQ domain
SCOP superfamily A middle domain of Talin 1
SCOP superfamily NblA-like
SCOP superfamily CAPPD, an extracellular domain of amyloid beta A4 protein
SCOP superfamily Domain from hypothetical 2610208m17rik protein
SCOP superfamily Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain
SCOP superfamily PhoU-like
SCOP superfamily DnaK suppressor protein DksA, alpha-hairpin domain
SCOP superfamily Proline/betaine transporter ProP, C-terminal cytoplasmic domain
SCOP superfamily G protein-binding domain
SCOP superfamily TSP type-3 repeat
SCOP superfamily Necrosis inducing protein 1, NIP1
SCOP superfamily Plexin repeat
SCOP superfamily Autotransporter
SCOP superfamily Respiratory nitrate reductase 1 gamma chain
SCOP superfamily PetL subunit of the cytochrome b6f complex
SCOP superfamily Major capsid protein VP5
SCOP superfamily 2-methylcitrate dehydratase PrpD
SCOP superfamily NinB
SCOP superfamily Suppressor of Fused, N-terminal domain
SCOP superfamily TT1751-like
SCOP superfamily Roadblock/LC7 domain
SCOP superfamily OmpA-like
SCOP superfamily Holliday junction resolvase RusA
SCOP superfamily CheC-like
SCOP superfamily Hypothetical protein TT1725
SCOP superfamily Hypothetical protein Ta1206
SCOP superfamily Colicin D/E5 nuclease domain
SCOP superfamily NIF3 (NGG1p interacting factor 3)-like
SCOP superfamily Bacterial fluorinating enzyme, N-terminal domain
SCOP superfamily Creatininase
SCOP superfamily AXH domain
SCOP superfamily Trimeric adhesin
SCOP superfamily Adhesin YadA, collagen-binding domain
SCOP superfamily Replicase NSP9
SCOP superfamily Hypothetical protein YgiW
SCOP superfamily Hydrophobin II, HfbII
SCOP superfamily Smp-1-like
SCOP superfamily Fungal immunomodulatory protein, FIP
SCOP superfamily Anti-sigma factor FlgM
SCOP superfamily Stathmin
SCOP superfamily Eukaryotic initiation factor 4f subunit eIF4g, eIF4e-binding domain
SCOP superfamily ADP-ribosylglycohydrolase
SCOP superfamily Hypothetical protein ST1625
SCOP superfamily P40 nucleoprotein
SCOP superfamily Hsp90 co-chaperone CDC37
SCOP superfamily YutG-like
SCOP superfamily Methenyltetrahydrofolate cyclohydrolase-like
SCOP superfamily Docking domain A of the erythromycin polyketide synthase (DEBS)
SCOP superfamily Colicin D immunity protein
SCOP superfamily Phosphoprotein XD domain
SCOP superfamily Typo IV secretion system protein TraC
SCOP superfamily IP3 receptor type 1 binding core, domain 2
SCOP superfamily Kazal-type serine protease inhibitors

Jump to [ Top of page · Assignment statistics ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.