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  Home > Genomes > Superfamily assignments for Mnemiopsis leidyi


Mnemiopsis leidyi superfamily assignments

Taxonomy
Taxonomy browser entry

Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Ctenophora; Tentaculata; Lobata; Bolinopsidae; Mnemiopsis; Mnemiopsis leidyi

Downloads
Fasta format sequences
Domain assignments

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Assignment statistics

Sequences: 16058 total
9111 (57 %) with assignment
461 average length
37 % amino acid coverage
Domains: 15415 total
919 unique superfamilies
683 unique families
304 average length
16.8 average superfamily size
94 % formed by duplication
Domain combinations: 1217 domain pairs
3471 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies
794 769 82 0 SCOP 81321 Family A G protein-coupled receptor-like
747 636 171 13 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
563 186 123 0 SCOP 48726 Immunoglobulin
474 187 68 0 SCOP 57667 beta-beta-alpha zinc fingers
413 204 75 0 SCOP 57424 LDL receptor-like module
323 313 96 3 SCOP 56112 Protein kinase-like (PK-like)
262 110 63 0 SCOP 57535 Complement control module/SCR domain
238 209 65 13 SCOP 48371 ARM repeat
234 213 59 1 SCOP 50978 WD40 repeat-like
232 121 81 1 SCOP 57184 Growth factor receptor domain
227 162 62 1 SCOP 54928 RNA-binding domain, RBD
222 218 77 4 SCOP 56672 DNA/RNA polymerases
219 193 62 2 SCOP 47473 EF-hand
212 201 28 0 SCOP 103473 MFS general substrate transporter
210 207 64 2 SCOP 56219 DNase I-like
204 124 68 1 SCOP 49785 Galactose-binding domain-like
191 162 69 1 SCOP 48403 Ankyrin repeat
187 102 54 2 SCOP 49899 Concanavalin A-like lectins/glucanases
181 176 62 8 SCOP 54001 Cysteine proteinases
178 50 45 0 SCOP 57196 EGF/Laminin
172 118 51 2 SCOP 48452 TPR-like
166 158 44 2 SCOP 54695 POZ domain
154 134 71 1 SCOP 57903 FYVE/PHD zinc finger
152 70 52 0 SCOP 56487 SRCR-like
147 143 61 1 SCOP 51197 Clavaminate synthase-like
141 102 30 4 SCOP 52833 Thioredoxin-like
136 135 52 4 SCOP 53098 Ribonuclease H-like
128 118 81 6 SCOP 50729 PH domain-like
121 73 37 2 SCOP 56436 C-type lectin-like
120 113 51 3 SCOP 57850 RING/U-box
120 80 60 0 SCOP 49562 C2 domain (Calcium/lipid-binding domain, CaLB)
118 108 28 1 SCOP 46689 Homeodomain-like
118 45 33 5 SCOP 81296 E set domains
106 104 34 8 SCOP 51735 NAD(P)-binding Rossmann-fold domains
105 83 36 0 SCOP 81324 Voltage-gated potassium channels
105 49 24 1 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
102 99 16 6 SCOP 53474 alpha/beta-Hydrolases
94 47 38 0 SCOP 82895 TSP-1 type 1 repeat
90 90 19 14 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
87 47 17 6 SCOP 53067 Actin-like ATPase domain
84 80 32 5 SCOP 46785 "Winged helix" DNA-binding domain
84 56 38 1 SCOP 50156 PDZ domain-like
83 71 48 5 SCOP 54236 Ubiquitin-like
81 61 40 0 SCOP 50044 SH3-domain
78 78 35 0 SCOP 52266 SGNH hydrolase
77 75 41 5 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
76 64 31 1 SCOP 52058 L domain-like
73 56 38 5 SCOP 50249 Nucleic acid-binding proteins
68 58 31 0 SCOP 57756 Retrovirus zinc finger-like domains
62 16 16 0 SCOP 57610 Thyroglobulin type-1 domain
61 15 15 1 SCOP 46966 Spectrin repeat
58 41 32 1 SCOP 57440 Kringle-like
57 57 17 4 SCOP 53448 Nucleotide-diphospho-sugar transferases
56 30 21 0 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
55 38 29 1 SCOP 49265 Fibronectin type III
54 49 25 3 SCOP 52799 (Phosphotyrosine protein) phosphatases II
53 43 21 5 SCOP 51905 FAD/NAD(P)-binding domain
53 47 22 1 SCOP 47576 Calponin-homology domain, CH-domain
53 23 18 0 SCOP 57414 Hairpin loop containing domain-like
51 33 23 0 SCOP 63748 Tudor/PWWP/MBT
49 45 17 1 SCOP 52047 RNI-like
48 20 19 0 SCOP 90209 Ran binding protein zinc finger-like
46 40 19 1 SCOP 117281 Kelch motif
45 41 13 2 SCOP 56300 Metallo-dependent phosphatases
45 20 12 2 SCOP 55753 Actin depolymerizing proteins
45 29 9 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
44 44 16 1 SCOP 53822 Periplasmic binding protein-like I
43 8 7 0 SCOP 49313 Cadherin-like
43 24 13 1 SCOP 47923 Ypt/Rab-GAP domain of gyp1p
41 41 20 2 SCOP 53300 vWA-like
41 38 31 1 SCOP 55550 SH2 domain
39 39 16 9 SCOP 56784 HAD-like
39 35 18 1 SCOP 57997 Tropomyosin
39 21 18 0 SCOP 57603 FnI-like domain
38 37 11 5 SCOP 53383 PLP-dependent transferases
38 16 14 0 SCOP 49723 Lipase/lipooxygenase domain (PLAT/LH2 domain)
37 36 17 0 SCOP 50370 Ricin B-like lectins
36 36 8 1 SCOP 103506 Mitochondrial carrier
36 35 22 1 SCOP 46565 Chaperone J-domain
36 23 14 0 SCOP 54768 dsRNA-binding domain-like
34 33 11 2 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
34 34 3 1 SCOP 48264 Cytochrome P450
34 21 11 2 SCOP 47954 Cyclin-like
33 33 17 0 SCOP 81383 F-box domain
33 32 22 2 SCOP 48350 GTPase activation domain, GAP
32 30 14 5 SCOP 53187 Zn-dependent exopeptidases
32 32 9 2 SCOP 54495 UBC-like
32 32 7 2 SCOP 53649 Alkaline phosphatase-like
32 13 11 1 SCOP 63411 LuxS/MPP-like metallohydrolase
32 18 17 0 SCOP 57567 Serine protease inhibitors
30 30 14 1 SCOP 50630 Acid proteases
30 28 19 4 SCOP 51445 (Trans)glycosidases
30 19 16 0 SCOP 52113 BRCT domain
29 29 10 1 SCOP 47616 GST C-terminal domain-like
29 29 5 1 SCOP 55307 Tubulin C-terminal domain-like
29 25 16 0 SCOP 47769 SAM/Pointed domain
28 28 16 1 SCOP 82199 SET domain
28 27 6 1 SCOP 52490 Tubulin nucleotide-binding domain-like
28 25 14 0 SCOP 100895 Kazal-type serine protease inhibitors
28 15 11 0 SCOP 51045 WW domain
27 26 15 3 SCOP 56059 Glutathione synthetase ATP-binding domain-like
27 27 12 1 SCOP 53850 Periplasmic binding protein-like II
27 27 18 1 SCOP 49879 SMAD/FHA domain
27 25 21 0 SCOP 46934 UBA-like
26 26 16 3 SCOP 103657 BAR/IMD domain-like
26 12 12 1 SCOP 63825 YWTD domain
26 25 5 0 SCOP 48652 Tetraspanin
25 25 7 4 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
25 21 13 0 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
25 11 9 0 SCOP 90257 Myosin rod fragments
25 19 16 1 SCOP 47370 Bromodomain
24 24 19 6 SCOP 54211 Ribosomal protein S5 domain 2-like
24 24 6 1 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
24 21 15 0 SCOP 47090 PGBD-like
24 24 20 1 SCOP 48065 DBL homology domain (DH-domain)
24 21 18 0 SCOP 57889 Cysteine-rich domain
24 12 9 0 SCOP 47862 Saposin
23 23 9 1 SCOP 55811 Nudix
23 21 7 1 SCOP 47095 HMG-box
23 22 5 1 SCOP 56801 Acetyl-CoA synthetase-like
23 14 8 1 SCOP 53901 Thiolase-like
23 17 10 0 SCOP 90123 ABC transporter transmembrane region
22 19 14 1 SCOP 50985 RCC1/BLIP-II
22 21 15 2 SCOP 50447 Translation proteins
22 16 9 1 SCOP 51206 cAMP-binding domain-like
22 22 17 0 SCOP 144232 HIT/MYND zinc finger-like
22 22 7 0 SCOP 47459 HLH, helix-loop-helix DNA-binding domain
21 20 3 0 SCOP 55136 Probable bacterial effector-binding domain
20 15 6 3 SCOP 52096 ClpP/crotonase
20 20 6 2 SCOP 47113 Histone-fold
20 17 15 1 SCOP 55073 Nucleotide cyclase
20 20 12 1 SCOP 50494 Trypsin-like serine proteases
19 19 7 3 SCOP 64356 SNARE-like
19 19 13 1 SCOP 64268 PX domain
19 19 10 1 SCOP 55797 PR-1-like
19 16 13 0 SCOP 52200 Toll/Interleukin receptor TIR domain
19 16 12 1 SCOP 54160 Chromo domain-like
19 10 8 0 SCOP 50911 Mannose 6-phosphate receptor domain
18 18 13 3 SCOP 52374 Nucleotidylyl transferase
18 16 10 0 SCOP 58038 SNARE fusion complex
18 10 10 0 SCOP 49854 Spermadhesin, CUB domain
17 17 4 1 SCOP 50182 Sm-like ribonucleoproteins
17 16 6 2 SCOP 109604 HD-domain/PDEase-like
17 17 11 1 SCOP 81665 Calcium ATPase, transmembrane domain M
17 16 12 1 SCOP 50923 Hemopexin-like domain
17 13 10 0 SCOP 90229 CCCH zinc finger
17 5 5 1 SCOP 47220 alpha-catenin/vinculin-like
17 17 12 1 SCOP 56204 Hect, E3 ligase catalytic domain
17 12 9 0 SCOP 69179 Integrin domains
16 10 9 3 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
16 13 5 1 SCOP 53720 ALDH-like
16 15 6 2 SCOP 56281 Metallo-hydrolase/oxidoreductase
16 16 8 1 SCOP 49764 HSP20-like chaperones
16 13 9 1 SCOP 54534 FKBP-like
16 16 8 1 SCOP 56601 beta-lactamase/transpeptidase-like
16 14 11 0 SCOP 81901 HCP-like
16 15 12 1 SCOP 81301 Nucleotidyltransferase
16 9 7 0 SCOP 82185 Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
16 15 7 3 SCOP 49417 p53-like transcription factors
16 14 12 1 SCOP 48097 Regulator of G-protein signaling, RGS
15 14 9 1 SCOP 51695 PLC-like phosphodiesterases
15 7 5 0 SCOP 49503 Cupredoxins
15 15 8 4 SCOP 52467 DHS-like NAD/FAD-binding domain
15 14 8 1 SCOP 48366 Ras GEF
15 15 12 1 SCOP 47031 Second domain of FERM
14 11 7 1 SCOP 52821 Rhodanese/Cell cycle control phosphatase
14 14 13 1 SCOP 55681 Class II aaRS and biotin synthetases
14 14 6 1 SCOP 50891 Cyclophilin-like
14 9 8 1 SCOP 56024 Phospholipase D/nuclease
14 9 6 2 SCOP 52777 CoA-dependent acyltransferases
14 12 5 1 SCOP 47203 Acyl-CoA dehydrogenase C-terminal domain-like
14 14 8 1 SCOP 69318 Integrin alpha N-terminal domain
14 14 6 1 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
14 10 9 1 SCOP 74924 Cap-Gly domain
13 13 10 5 SCOP 51556 Metallo-dependent hydrolases
13 13 6 1 SCOP 53254 Phosphoglycerate mutase-like
13 13 9 0 SCOP 63829 Calcium-dependent phosphotriesterase
13 13 12 1 SCOP 56399 ADP-ribosylation
13 13 5 1 SCOP 161070 SNF-like
13 11 8 0 SCOP 101898 NHL repeat
13 12 10 2 SCOP 49599 TRAF domain-like
13 13 5 0 SCOP 57959 Leucine zipper domain
12 12 5 2 SCOP 51569 Aldolase
12 10 4 2 SCOP 53271 PRTase-like
12 11 7 3 SCOP 100950 NagB/RpiA/CoA transferase-like
12 12 3 1 SCOP 51430 NAD(P)-linked oxidoreductase
12 9 5 1 SCOP 49329 Cu,Zn superoxide dismutase-like
12 8 6 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
12 11 6 2 SCOP 55961 Bet v1-like
12 12 11 3 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
12 12 12 0 SCOP 57845 B-box zinc-binding domain
12 11 8 1 SCOP 101912 Sema domain
12 12 2 0 SCOP 57501 Cystine-knot cytokines
12 8 3 0 SCOP 55394 Bactericidal permeability-increasing protein, BPI
12 12 7 3 SCOP 48464 ENTH/VHS domain
12 6 5 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
11 11 6 1 SCOP 50104 Translation proteins SH3-like domain
11 11 8 2 SCOP 52402 Adenine nucleotide alpha hydrolases-like
11 11 9 0 SCOP 52151 FabD/lysophospholipase-like
11 11 5 1 SCOP 56645 Acyl-CoA dehydrogenase NM domain-like
11 10 9 0 SCOP 82171 DPP6 N-terminal domain-like
11 10 6 1 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
11 11 8 2 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
11 11 9 0 SCOP 49695 gamma-Crystallin-like
11 11 3 2 SCOP 52029 GroEL apical domain-like
11 11 7 1 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
11 10 6 0 SCOP 47986 DEATH domain
11 11 6 1 SCOP 81653 Calcium ATPase, transduction domain A
10 10 4 2 SCOP 52317 Class I glutamine amidotransferase-like
10 10 6 1 SCOP 81606 PP2C-like
10 10 6 2 SCOP 55315 L30e-like
10 10 7 1 SCOP 88723 PIN domain-like
10 8 6 1 SCOP 54631 CBS-domain pair
10 8 6 1 SCOP 47413 lambda repressor-like DNA-binding domains
10 10 9 3 SCOP 88697 PUA domain-like
10 10 9 1 SCOP 52743 Subtilisin-like
10 6 3 0 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
10 10 2 1 SCOP 48592 GroEL equatorial domain-like
10 5 5 1 SCOP 54980 EF-G C-terminal domain-like
10 8 8 0 SCOP 51110 alpha-D-mannose-specific plant lectins
10 10 6 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
10 10 7 2 SCOP 54373 FAD-linked reductases, C-terminal domain
10 3 3 1 SCOP 53738 Phosphoglucomutase, first 3 domains
10 10 3 1 SCOP 47895 Transducin (alpha subunit), insertion domain
10 10 8 1 SCOP 101447 Formin homology 2 domain (FH2 domain)
10 2 2 0 SCOP 81698 FF domain
9 9 8 1 SCOP 55920 Creatinase/aminopeptidase
9 8 5 1 SCOP 50129 GroES-like
9 4 3 0 SCOP 47060 S15/NS1 RNA-binding domain
9 8 5 0 SCOP 51161 Trimeric LpxA-like enzymes
9 9 3 0 SCOP 46579 Prefoldin
9 8 6 2 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
9 8 4 0 SCOP 54897 Protease propeptides/inhibitors
9 9 5 1 SCOP 55931 Glutamine synthetase/guanido kinase
9 9 3 1 SCOP 56574 Serpins
9 9 4 1 SCOP 47661 t-snare proteins
9 9 6 0 SCOP 57863 ArfGap/RecO-like zinc finger
9 9 6 1 SCOP 63380 Riboflavin synthase domain-like
9 8 8 0 SCOP 81631 PAP/OAS1 substrate-binding domain
9 9 3 0 SCOP 56973 Aerolisin/ETX pore-forming domain
9 8 6 1 SCOP 74788 Cullin repeat-like
9 9 3 1 SCOP 47874 Annexin
9 8 7 1 SCOP 140741 RUN domain-like
9 9 9 0 SCOP 103575 Plexin repeat
9 9 1 0 SCOP 54849 GroEL-intermediate domain like
8 8 5 1 SCOP 55120 Pseudouridine synthase
8 8 4 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
8 8 5 0 SCOP 54060 His-Me finger endonucleases
8 8 1 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
8 8 7 1 SCOP 52954 Class II aaRS ABD-related
8 8 2 0 SCOP 48484 Lipoxigenase
8 8 3 1 SCOP 111352 Ammonium transporter
8 8 5 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
8 8 6 1 SCOP 52440 PreATP-grasp domain
8 8 5 0 SCOP 68906 SAP domain
8 6 6 1 SCOP 158702 Sec63 N-terminal domain-like
8 7 4 1 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
7 7 4 1 SCOP 81338 Aquaporin-like
7 7 3 1 SCOP 53613 Ribokinase-like
7 7 6 0 SCOP 111331 NAD kinase/diacylglycerol kinase-like
7 7 5 0 SCOP 52218 Flavoproteins
7 7 4 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
7 7 4 2 SCOP 56104 SAICAR synthase-like
7 7 6 2 SCOP 48208 Six-hairpin glycosidases
7 7 5 2 SCOP 52768 Arginase/deacetylase
7 5 5 1 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
7 7 6 1 SCOP 57783 Zinc beta-ribbon
7 7 7 1 SCOP 51230 Single hybrid motif
7 7 5 0 SCOP 161111 Cation efflux protein transmembrane domain-like
7 4 4 0 SCOP 55785 PYP-like sensor domain (PAS domain)
7 7 7 0 SCOP 69322 Tricorn protease domain 2
7 5 4 0 SCOP 47781 RuvA domain 2-like
7 3 3 0 SCOP 50199 Staphylococcal nuclease
7 7 5 0 SCOP 50965 Galactose oxidase, central domain
7 7 6 0 SCOP 52075 Outer arm dynein light chain 1
7 6 4 1 SCOP 81837 BEACH domain
7 7 5 0 SCOP 101576 Supernatant protein factor (SPF), C-terminal domain
7 5 5 0 SCOP 117839 WWE domain
7 6 5 0 SCOP 49758 Calpain large subunit, middle domain (domain III)
6 5 3 1 SCOP 52980 Restriction endonuclease-like
6 6 1 1 SCOP 56655 Carbohydrate phosphatase
6 6 2 1 SCOP 48576 Terpenoid synthases
6 6 2 1 SCOP 56815 Sec1/munc18-like (SM) proteins
6 6 6 0 SCOP 54427 NTF2-like
6 6 6 2 SCOP 74650 Galactose mutarotase-like
6 6 5 0 SCOP 55856 Cytochrome b5-like heme/steroid binding domain
6 6 3 0 SCOP 50242 TIMP-like
6 6 3 1 SCOP 54518 Tubby C-terminal domain-like
6 5 5 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
6 6 1 0 SCOP 50814 Lipocalins
6 4 4 0 SCOP 50405 Actin-crosslinking proteins
6 3 3 0 SCOP 49299 PKD domain
6 6 3 1 SCOP 117892 Band 7/SPFH domain
6 6 5 0 SCOP 82708 R3H domain
6 6 3 0 SCOP 57302 Snake toxin-like
6 6 1 1 SCOP 48445 14-3-3 protein
6 6 6 1 SCOP 52087 CRAL/TRIO domain
6 6 5 1 SCOP 111347 Rap/Ran-GAP
6 6 3 0 SCOP 47391 Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
6 6 5 1 SCOP 101690 PAZ domain
6 5 4 1 SCOP 109905 Surp module (SWAP domain)
6 6 3 1 SCOP 49447 Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
6 6 6 1 SCOP 48425 Sec7 domain
6 5 4 0 SCOP 63451 LEM domain
6 3 3 0 SCOP 47762 PAH2 domain
5 4 4 3 SCOP 54197 HIT-like
5 5 5 2 SCOP 53137 Translational machinery components
5 5 1 1 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
5 5 3 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
5 5 5 0 SCOP 54292 2Fe-2S ferredoxin-like
5 5 4 1 SCOP 102114 Radical SAM enzymes
5 5 4 1 SCOP 51395 FMN-linked oxidoreductases
5 5 4 1 SCOP 52949 Macro domain-like
5 5 3 1 SCOP 48239 Terpenoid cyclases/Protein prenyltransferases
5 5 4 1 SCOP 47027 Acyl-CoA binding protein
5 5 3 1 SCOP 144000 Oxysterol-binding protein-like
5 5 3 4 SCOP 51182 RmlC-like cupins
5 5 3 1 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
5 5 2 0 SCOP 144091 Rhomboid-like
5 5 1 1 SCOP 51069 Carbonic anhydrase
5 5 3 1 SCOP 56349 DNA breaking-rejoining enzymes
5 5 4 0 SCOP 81340 Clc chloride channel
5 5 5 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
5 5 5 0 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
5 4 2 2 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
5 5 2 0 SCOP 48019 post-AAA+ oligomerization domain-like
5 4 3 1 SCOP 52210 Succinyl-CoA synthetase domains
5 5 2 1 SCOP 48056 Di-copper centre-containing domain
5 5 5 0 SCOP 51011 Glycosyl hydrolase domain
5 5 5 2 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
5 4 3 0 SCOP 49363 Purple acid phosphatase, N-terminal domain
5 4 4 0 SCOP 118310 AN1-like Zinc finger
5 5 4 2 SCOP 49348 Clathrin adaptor appendage domain
5 3 3 1 SCOP 49742 PHM/PNGase F
5 5 3 1 SCOP 56366 SMAD MH1 domain
5 5 3 0 SCOP 54277 CAD & PB1 domains
5 5 5 0 SCOP 46774 ARID-like
5 4 3 1 SCOP 82109 MIR domain
5 5 3 0 SCOP 47676 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
5 5 4 1 SCOP 109993 VPS9 domain
5 5 3 1 SCOP 75632 Cullin homology domain
5 5 4 0 SCOP 47050 VHP, Villin headpiece domain
5 2 2 1 SCOP 109885 I/LWEQ domain
5 5 3 0 SCOP 82927 Cysteine-rich DNA binding domain, (DM domain)
5 5 4 0 SCOP 57283 PMP inhibitors
5 5 4 0 SCOP 75553 Smc hinge domain
5 5 4 0 SCOP 55666 Ribonuclease PH domain 2-like
5 5 4 1 SCOP 69340 C-terminal domain of adenylylcyclase associated protein
4 4 2 1 SCOP 53167 Purine and uridine phosphorylases
4 4 3 1 SCOP 53927 Cytidine deaminase-like
4 4 2 0 SCOP 57829 Zn-binding ribosomal proteins
4 4 3 0 SCOP 46911 Ribosomal protein S18
4 4 2 1 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
4 4 2 0 SCOP 52080 Ribosomal proteins L15p and L18e
4 4 3 0 SCOP 47336 ACP-like
4 3 3 0 SCOP 81333 F1F0 ATP synthase subunit C
4 4 4 1 SCOP 54862 4Fe-4S ferredoxins
4 3 3 0 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
4 4 1 1 SCOP 53590 Nucleoside hydrolase
4 4 1 1 SCOP 54648 DLC
4 4 4 1 SCOP 47819 HRDC-like
4 4 2 2 SCOP 52972 ITPase-like
4 4 3 0 SCOP 51126 Pectin lyase-like
4 3 3 1 SCOP 55781 GAF domain-like
4 4 4 1 SCOP 48113 Heme-dependent peroxidases
4 4 3 1 SCOP 82282 Homocysteine S-methyltransferase
4 4 4 0 SCOP 58113 Apolipoprotein A-I
4 3 3 0 SCOP 46458 Globin-like
4 4 4 0 SCOP 141571 Pentapeptide repeat-like
4 4 3 0 SCOP 102712 JAB1/MPN domain
4 3 2 0 SCOP 46955 Putative DNA-binding domain
4 4 2 1 SCOP 118215 Proton glutamate symport protein
4 4 3 1 SCOP 103025 Folate-binding domain
4 2 2 0 SCOP 101386 all-alpha NTP pyrophosphatases
4 4 1 0 SCOP 55804 Phoshotransferase/anion transport protein
4 3 3 1 SCOP 47592 SWIB/MDM2 domain
4 4 2 1 SCOP 55895 Ribonuclease Rh-like
4 4 4 1 SCOP 51246 Rudiment single hybrid motif
4 4 4 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
4 4 2 0 SCOP 54403 Cystatin/monellin
4 2 2 0 SCOP 49468 VHL
4 4 4 0 SCOP 81995 beta-sandwich domain of Sec23/24
4 4 3 1 SCOP 140990 FtsH protease domain-like
4 4 3 0 SCOP 50621 Alanine racemase C-terminal domain-like
4 4 3 0 SCOP 54171 DNA-binding domain
4 4 3 0 SCOP 55060 GHMP Kinase, C-terminal domain
4 4 4 0 SCOP 49354 PapD-like
4 4 3 1 SCOP 56327 LDH C-terminal domain-like
4 4 4 0 SCOP 46938 CRAL/TRIO N-terminal domain
4 4 4 0 SCOP 57625 Invertebrate chitin-binding proteins
4 2 1 0 SCOP 141072 CalX-like
4 4 4 0 SCOP 57492 Trefoil
4 4 3 2 SCOP 158573 GINS helical bundle-like
4 2 2 0 SCOP 89837 Doublecortin (DC)
4 3 3 1 SCOP 116846 MIT domain
4 4 4 0 SCOP 52025 PA domain
4 4 2 0 SCOP 140111 Endosomal sorting complex assembly domain
4 4 4 0 SCOP 109715 DEK C-terminal domain
4 4 1 0 SCOP 48034 Guanido kinase N-terminal domain
4 4 3 0 SCOP 63501 Frizzled cysteine-rich domain
4 3 2 1 SCOP 140383 BSD domain-like
4 4 3 0 SCOP 82919 Zn-finger domain of Sec23/24
3 3 1 2 SCOP 51366 Ribulose-phoshate binding barrel
3 3 3 1 SCOP 52166 Ribosomal protein L4
3 3 3 0 SCOP 110324 Ribosomal L27 protein-like
3 3 3 1 SCOP 75217 alpha/beta knot
3 3 3 0 SCOP 160369 Ribosomal protein L10-like
3 3 1 0 SCOP 51316 Mss4-like
3 3 3 1 SCOP 51730 FAD-linked oxidoreductase
3 3 2 2 SCOP 48557 L-aspartase-like
3 3 3 1 SCOP 48150 DNA-glycosylase
3 3 3 1 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
3 2 2 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
3 3 3 0 SCOP 101908 Putative isomerase YbhE
3 2 2 1 SCOP 55205 EPT/RTPC-like
3 3 2 0 SCOP 55129 Ribosomal protein L30p/L7e
3 3 2 0 SCOP 144122 Tim10-like
3 3 1 0 SCOP 48613 Heme oxygenase-like
3 3 2 1 SCOP 52499 Isochorismatase-like hydrolases
3 3 3 1 SCOP 56019 The spindle assembly checkpoint protein mad2
3 3 1 0 SCOP 51306 LexA/Signal peptidase
3 3 3 1 SCOP 48439 Protein prenylyltransferase
3 3 3 0 SCOP 53639 AraD/HMP-PK domain-like
3 2 2 1 SCOP 69645 Arp2/3 complex subunits
3 3 3 1 SCOP 111126 Ligand-binding domain in the NO signalling and Golgi transport
3 3 1 0 SCOP 47694 Cytochrome c oxidase subunit h
3 3 2 0 SCOP 55257 RBP11-like subunits of RNA polymerase
3 3 2 1 SCOP 56529 FAH
3 3 3 1 SCOP 55159 eIF1-like
3 3 1 1 SCOP 55909 Pentein
3 3 3 2 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
3 3 2 0 SCOP 101478 ADP-ribosylglycohydrolase
3 3 3 0 SCOP 55718 SCP-like
3 3 3 1 SCOP 52016 LeuD/IlvD-like
3 3 3 1 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
3 3 2 0 SCOP 110857 Gamma-glutamyl cyclotransferase-like
3 3 1 0 SCOP 143410 DOPA-like
3 3 3 0 SCOP 51338 Composite domain of metallo-dependent hydrolases
3 3 3 1 SCOP 52242 Cobalamin (vitamin B12)-binding domain
3 3 2 0 SCOP 75011 3-carboxy-cis,cis-mucoante lactonizing enzyme
3 3 1 1 SCOP 103196 Roadblock/LC7 domain
3 3 2 2 SCOP 51604 Enolase C-terminal domain-like
3 3 3 1 SCOP 100939 SPOC domain-like
3 3 1 1 SCOP 89124 Nop domain
3 3 3 0 SCOP 55186 ThrRS/AlaRS common domain
3 3 2 0 SCOP 53092 Creatinase/prolidase N-terminal domain
3 2 2 1 SCOP 55979 DNA clamp
3 3 3 0 SCOP 56176 FAD-binding/transporter-associated domain-like
3 3 1 0 SCOP 54106 LysM domain
3 3 3 0 SCOP 58104 Methyl-accepting chemotaxis protein (MCP) signaling domain
3 3 2 1 SCOP 52922 TK C-terminal domain-like
3 1 1 1 SCOP 55973 S-adenosylmethionine synthetase
3 3 3 1 SCOP 52129 Caspase-like
3 3 2 0 SCOP 49464 Carboxypeptidase regulatory domain-like
3 2 2 0 SCOP 55658 L9 N-domain-like
3 3 2 0 SCOP 160059 PriA/YqbF domain
3 3 2 1 SCOP 52418 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
3 3 3 0 SCOP 48334 DNA repair protein MutS, domain III
3 3 2 0 SCOP 101967 Adhesin YadA, collagen-binding domain
3 3 3 1 SCOP 48225 Seven-hairpin glycosidases
3 3 1 1 SCOP 81891 Poly A polymerase C-terminal region-like
3 2 2 0 SCOP 103647 TSP type-3 repeat
3 3 3 0 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
3 2 2 1 SCOP 55945 TATA-box binding protein-like
3 2 2 1 SCOP 55116 Formiminotransferase domain of formiminotransferase-cyclodeaminase.
3 3 3 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
3 3 2 0 SCOP 55545 beta-N-acetylhexosaminidase-like domain
3 3 3 1 SCOP 55957 Phosphoglucomutase, C-terminal domain
3 3 3 1 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
3 3 3 1 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
3 3 3 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
3 3 1 1 SCOP 48508 Nuclear receptor ligand-binding domain
3 3 2 1 SCOP 101152 Mob1/phocein
3 3 3 1 SCOP 51092 Vitelline membrane outer protein-I (VMO-I)
3 1 1 0 SCOP 57256 Elafin-like
3 3 3 1 SCOP 82754 C-terminal, gelsolin-like domain of Sec23/24
3 3 1 1 SCOP 144074 E2F-DP heterodimerization region
3 3 3 1 SCOP 47672 Transferrin receptor-like dimerisation domain
3 3 2 1 SCOP 47216 Proteasome activator
3 1 1 0 SCOP 46585 HR1 repeat
3 2 2 0 SCOP 57774 Microbial and mitochondrial ADK, insert "zinc finger" domain
3 3 2 0 SCOP 57552 Blood coagulation inhibitor (disintegrin)
3 1 1 0 SCOP 57277 Granulin repeat
3 3 3 0 SCOP 110942 HSP90 C-terminal domain
3 3 3 1 SCOP 103243 KA1-like
3 3 3 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
3 3 3 0 SCOP 54556 Chitinase insertion domain
3 2 2 0 SCOP 49309 Transglutaminase, two C-terminal domains
3 3 3 0 SCOP 143575 GAS2 domain-like
3 3 3 0 SCOP 63763 SAND domain-like
3 3 2 1 SCOP 55711 Subdomain of clathrin and coatomer appendage domain
3 3 3 1 SCOP 54585 Cdc48 domain 2-like
3 3 2 0 SCOP 101790 Aminomethyltransferase beta-barrel domain
3 3 3 1 SCOP 89009 GAT-like domain
3 3 3 1 SCOP 47587 Domain of poly(ADP-ribose) polymerase
2 2 1 1 SCOP 56808 Ribosomal protein L1
2 2 2 1 SCOP 47973 Ribosomal protein S7
2 2 2 1 SCOP 52141 Uracil-DNA glycosylase-like
2 2 2 1 SCOP 75304 Amidase signature (AS) enzymes
2 2 2 2 SCOP 53697 SIS domain
2 2 2 0 SCOP 54843 Ribosomal protein L22
2 2 2 1 SCOP 54686 Ribosomal protein L16p/L10e
2 2 1 1 SCOP 50193 Ribosomal protein L14
2 2 2 0 SCOP 46946 S13-like H2TH domain
2 1 1 0 SCOP 56214 4'-phosphopantetheinyl transferase
2 1 1 1 SCOP 53784 Phosphofructokinase
2 2 1 1 SCOP 47240 Ferritin-like
2 2 2 1 SCOP 75620 Release factor
2 2 1 0 SCOP 55174 Alpha-L RNA-binding motif
2 1 1 1 SCOP 50324 Inorganic pyrophosphatase
2 2 1 0 SCOP 52161 Ribosomal protein L13
2 2 2 1 SCOP 51283 dUTPase-like
2 2 2 1 SCOP 51713 tRNA-guanine transglycosylase
2 2 2 0 SCOP 50715 Ribosomal protein L25-like
2 2 2 1 SCOP 52313 Ribosomal protein S2
2 2 2 1 SCOP 64005 Undecaprenyl diphosphate synthase
2 2 1 0 SCOP 82657 BolA-like
2 2 2 1 SCOP 51419 PLP-binding barrel
2 2 1 1 SCOP 50475 FMN-binding split barrel
2 2 2 0 SCOP 110296 Oligoxyloglucan reducing end-specific cellobiohydrolase
2 1 1 0 SCOP 69500 DTD-like
2 2 2 0 SCOP 140718 Mediator hinge subcomplex-like
2 2 2 1 SCOP 53328 Formyltransferase
2 2 2 2 SCOP 46626 Cytochrome c
2 2 2 1 SCOP 55248 PCD-like
2 2 1 0 SCOP 47072 Cysteine alpha-hairpin motif
2 2 2 1 SCOP 88713 Glycoside hydrolase/deacetylase
2 2 2 0 SCOP 53032 tRNA-intron endonuclease catalytic domain-like
2 2 2 0 SCOP 64153 YjeF N-terminal domain-like
2 2 1 1 SCOP 143113 NAP-like
2 2 1 1 SCOP 55418 eIF4e-like
2 2 1 0 SCOP 55770 Profilin (actin-binding protein)
2 2 2 0 SCOP 69618 HemD-like
2 1 1 1 SCOP 161084 MAPEG domain-like
2 2 1 0 SCOP 143243 Nqo5-like
2 1 1 0 SCOP 54909 Dimeric alpha+beta barrel
2 2 1 0 SCOP 89733 L-sulfolactate dehydrogenase-like
2 1 1 1 SCOP 53218 Molybdenum cofactor biosynthesis proteins
2 2 2 0 SCOP 54736 ClpS-like
2 2 2 1 SCOP 53955 Lysozyme-like
2 2 2 1 SCOP 50800 PK beta-barrel domain-like
2 2 2 1 SCOP 53732 Aconitase iron-sulfur domain
2 1 1 0 SCOP 69065 RNase III domain-like
2 1 1 1 SCOP 82544 GckA/TtuD-like
2 2 1 1 SCOP 48173 Cryptochrome/photolyase FAD-binding domain
2 2 1 0 SCOP 52425 Cryptochrome/photolyase, N-terminal domain
2 2 1 1 SCOP 89796 CoA-transferase family III (CaiB/BaiF)
2 2 2 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
2 1 1 0 SCOP 55846 N-acetylmuramoyl-L-alanine amidase-like
2 2 2 1 SCOP 110395 CutC-like
2 2 2 0 SCOP 49452 Starch-binding domain-like
2 2 1 0 SCOP 69349 Phage fibre proteins
2 2 2 0 SCOP 82704 AlbA-like
2 2 2 1 SCOP 111321 AF1104-like
2 2 2 0 SCOP 160350 Rnp2-like
2 2 1 1 SCOP 54984 eEF-1beta-like
2 2 2 1 SCOP 102462 Peptidyl-tRNA hydrolase II
2 2 2 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
2 2 2 0 SCOP 158832 Tex N-terminal region-like
2 2 1 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
2 2 1 0 SCOP 50960 TolB, C-terminal domain
2 2 2 0 SCOP 55103 FAD-linked oxidases, C-terminal domain
2 2 2 0 SCOP 141255 YccV-like
2 2 2 0 SCOP 69989 C-terminal domain of PLC-beta
2 2 2 0 SCOP 142921 WGR domain-like
2 2 2 0 SCOP 118116 DNA mismatch repair protein MutL
2 1 1 0 SCOP 49384 Carbohydrate-binding domain
2 2 1 0 SCOP 158745 LanC-like
2 2 1 1 SCOP 55816 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
2 2 2 0 SCOP 51294 Hedgehog/intein (Hint) domain
2 2 2 0 SCOP 74853 Lamin A/C globular tail domain
2 2 2 0 SCOP 51120 beta-Roll
2 2 1 1 SCOP 54826 Enolase N-terminal domain-like
2 2 1 0 SCOP 56042 PurM C-terminal domain-like
2 2 1 0 SCOP 55326 PurM N-terminal domain-like
2 2 2 0 SCOP 117289 Nucleoporin domain
2 2 2 0 SCOP 75689 Zinc-binding domain of translation initiation factor 2 beta
2 2 2 0 SCOP 100966 Translation initiation factor 2 beta, aIF2beta, N-terminal domain
2 2 1 0 SCOP 47794 Rad51 N-terminal domain-like
2 1 1 0 SCOP 56053 Ribosomal protein L6
2 2 2 0 SCOP 55031 Bacterial exopeptidase dimerisation domain
2 2 1 0 SCOP 54680 Pyrimidine nucleoside phosphorylase C-terminal domain
2 2 2 0 SCOP 81271 TGS-like
2 2 2 0 SCOP 110221 AbfB domain
2 2 1 0 SCOP 48670 Transducin (heterotrimeric G protein), gamma chain
2 2 2 1 SCOP 69000 FAD-dependent thiol oxidase
2 2 2 0 SCOP 47396 Transcription factor IIA (TFIIA), alpha-helical domain
2 2 2 1 SCOP 63570 PABC (PABP) domain
2 2 2 1 SCOP 55455 SRF-like
2 2 2 0 SCOP 110004 Glycolipid transfer protein, GLTP
2 2 1 0 SCOP 82051 Obg GTP-binding protein N-terminal domain
2 2 2 1 SCOP 69012 alpha-ketoacid dehydrogenase kinase, N-terminal domain
2 2 2 1 SCOP 88798 N-terminal, heterodimerisation domain of RBP7 (RpoE)
2 2 1 1 SCOP 116907 Hook domain
2 2 2 0 SCOP 140856 USP8 N-terminal domain-like
2 2 2 1 SCOP 88688 Families 57/38 glycoside transferase middle domain
2 2 2 0 SCOP 63491 BAG domain
2 2 1 0 SCOP 54368 Glutamine synthetase, N-terminal domain
2 2 2 0 SCOP 47454 A DNA-binding domain in eukaryotic transcription factors
2 2 2 1 SCOP 101233 PWI domain
2 2 2 1 SCOP 117018 ATP-dependent DNA ligase DNA-binding domain
2 2 2 0 SCOP 50784 Transcription factor IIA (TFIIA), beta-barrel domain
2 2 2 0 SCOP 50916 Rap30/74 interaction domains
2 2 2 1 SCOP 57933 TAZ domain
2 2 2 0 SCOP 69099 Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain
2 2 1 0 SCOP 48678 Moesin tail domain
2 2 2 0 SCOP 143503 PUG domain-like
2 2 2 0 SCOP 47655 STAT
2 2 2 0 SCOP 55277 GYF domain
2 2 2 0 SCOP 69848 LCCL domain
2 2 2 0 SCOP 158553 TAFH domain-like
2 2 2 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
2 1 1 0 SCOP 82615 Polo-box domain
2 2 2 1 SCOP 100909 IP3 receptor type 1 binding core, domain 2
2 2 2 1 SCOP 63887 P-domain of calnexin/calreticulin
2 2 2 0 SCOP 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
2 1 1 0 SCOP 90193 Notch domain
2 2 1 0 SCOP 58069 Virus ectodomain
2 2 2 1 SCOP 81811 Helical domain of Sec23/24
2 2 1 1 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
2 2 2 1 SCOP 47644 Methionine synthase domain
2 2 2 0 SCOP 158457 Orange domain-like
2 2 2 0 SCOP 158230 PRP4-like
1 1 1 1 SCOP 53790 Tetrapyrrole methylase
1 1 1 1 SCOP 53178 Peptidyl-tRNA hydrolase-like
1 1 1 0 SCOP 54999 Ribosomal protein S10
1 1 1 0 SCOP 54570 Ribosomal protein S19
1 1 1 1 SCOP 55282 RL5-like
1 1 1 1 SCOP 56047 Ribosomal protein S8
1 1 1 1 SCOP 103491 Preprotein translocase SecY subunit
1 1 1 0 SCOP 64263 Prokaryotic ribosomal protein L17
1 1 1 0 SCOP 64182 DHH phosphoesterases
1 1 1 0 SCOP 74731 Ribosomal protein L20
1 1 1 1 SCOP 55831 Thymidylate synthase/dCMP hydroxymethylase
1 1 1 1 SCOP 53597 Dihydrofolate reductase-like
1 1 1 0 SCOP 141091 L21p-like
1 1 1 1 SCOP 51658 Xylose isomerase-like
1 1 1 1 SCOP 53748 Phosphoglycerate kinase
1 1 1 1 SCOP 82549 DAK1/DegV-like
1 1 1 0 SCOP 75625 YebC-like
1 1 1 1 SCOP 82649 SufE/NifU
1 1 1 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
1 1 1 1 SCOP 51351 Triosephosphate isomerase (TIM)
1 1 1 0 SCOP 53633 Carbamate kinase-like
1 1 1 0 SCOP 55194 Ribosome recycling factor, RRF
1 1 1 0 SCOP 54565 Ribosomal protein S16
1 1 1 1 SCOP 55821 YrdC/RibB
1 1 1 0 SCOP 89360 HesB-like domain
1 1 1 1 SCOP 56770 HydA/Nqo6-like
1 1 1 1 SCOP 102705 NIF3 (NGG1p interacting factor 3)-like
1 1 1 1 SCOP 55298 YjgF-like
1 1 1 1 SCOP 81452 Cytochrome c oxidase subunit III-like
1 1 1 0 SCOP 46561 Ribosomal protein L29 (L29p)
1 1 1 1 SCOP 56796 Dehydroquinate synthase-like
1 1 1 0 SCOP 54995 Ribosomal protein S6
1 1 1 0 SCOP 48140 Ribosomal protein L19 (L19e)
1 1 1 1 SCOP 144217 CSL zinc finger
1 1 1 0 SCOP 52042 Ribosomal protein L32e
1 1 1 0 SCOP 55469 FMN-dependent nitroreductase-like
1 1 1 1 SCOP 48256 Citrate synthase
1 1 1 0 SCOP 141678 MAL13P1.257-like
1 1 1 0 SCOP 54575 Ribosomal protein L31e
1 1 1 1 SCOP 102886 Coproporphyrinogen III oxidase
1 1 1 1 SCOP 51726 UROD/MetE-like
1 1 1 0 SCOP 81524 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 1 SCOP 57798 Casein kinase II beta subunit
1 1 1 0 SCOP 81411 Mitochondrial cytochrome c oxidase subunit VIa
1 1 1 0 SCOP 81406 Mitochondrial cytochrome c oxidase subunit IV
1 1 1 0 SCOP 159468 AtpF-like
1 1 1 0 SCOP 63393 RNA polymerase subunits
1 1 1 0 SCOP 55144 LigT-like
1 1 1 0 SCOP 89895 FYSH domain
1 1 1 1 SCOP 53774 Glutaminase/Asparaginase
1 1 1 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
1 1 1 1 SCOP 90096 Subunits of heterodimeric actin filament capping protein Capz
1 1 1 1 SCOP 69103 Arp2/3 complex 16 kDa subunit ARPC5
1 1 1 0 SCOP 56317 Carbon-nitrogen hydrolase
1 1 1 0 SCOP 48662 Ribosomal protein L39e
1 1 1 0 SCOP 140959 Indolic compounds 2,3-dioxygenase-like
1 1 1 1 SCOP 118203 Vacuolar ATP synthase subunit C
1 1 1 0 SCOP 161219 CHY zinc finger-like
1 1 1 0 SCOP 81343 Fumarate reductase respiratory complex transmembrane subunits
1 1 1 0 SCOP 49777 PEBP-like
1 1 1 1 SCOP 69060 Arp2/3 complex 21 kDa subunit ARPC3
1 1 1 0 SCOP 103486 V-type ATP synthase subunit C
1 1 1 0 SCOP 143870 PF0523-like
1 1 1 0 SCOP 55008 HMA, heavy metal-associated domain
1 1 1 0 SCOP 103111 Activator of Hsp90 ATPase, Aha1
1 1 1 1 SCOP 46988 Tubulin chaperone cofactor A
1 1 1 0 SCOP 143447 AMMECR1-like
1 1 1 1 SCOP 63562 RPB6/omega subunit-like
1 1 1 1 SCOP 81442 Cytochrome c oxidase subunit I-like
1 1 1 1 SCOP 53800 Chelatase
1 1 1 1 SCOP 81342 Transmembrane di-heme cytochromes
1 1 1 0 SCOP 81648 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 1 SCOP 101546 ASF1-like
1 1 1 0 SCOP 49478 Cna protein B-type domain
1 1 1 0 SCOP 111038 YjbQ-like
1 1 1 0 SCOP 69118 AhpD-like
1 1 1 0 SCOP 52091 SpoIIaa-like
1 1 1 0 SCOP 51717 Dihydropteroate synthetase-like
1 1 1 1 SCOP 53795 PEP carboxykinase-like
1 1 1 1 SCOP 51998 PFL-like glycyl radical enzymes
1 1 1 1 SCOP 118196 YaeB-like
1 1 1 0 SCOP 55331 Tautomerase/MIF
1 1 1 1 SCOP 56524 Oxidoreductase molybdopterin-binding domain
1 1 1 1 SCOP 50022 ISP domain
1 1 1 0 SCOP 55083 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
1 1 1 0 SCOP 101744 Rof/RNase P subunit-like
1 1 1 0 SCOP 54447 ssDNA-binding transcriptional regulator domain
1 1 1 0 SCOP 89550 PHP domain-like
1 1 1 1 SCOP 50692 ADC-like
1 1 1 0 SCOP 143990 YbiA-like
1 1 1 0 SCOP 54690 Molybdopterin synthase subunit MoaE
1 1 1 1 SCOP 56762 HydB/Nqo4-like
1 1 1 1 SCOP 117856 AF0104/ALDC/Ptd012-like
1 1 1 1 SCOP 103365 Hypothetical protein PH1602
1 1 1 1 SCOP 50993 Peptidase/esterase 'gauge' domain
1 1 1 0 SCOP 143081 BB1717-like
1 1 1 0 SCOP 54975 Acylphosphatase/BLUF domain-like
1 1 1 0 SCOP 158997 Trm112p-like
1 1 1 0 SCOP 109910 YgfY-like
1 1 1 0 SCOP 102588 LmbE-like
1 1 1 1 SCOP 160909 ATP12-like
1 1 1 0 SCOP 110069 ApaG-like
1 1 1 0 SCOP 56747 Prim-pol domain
1 1 1 0 SCOP 52335 Methylglyoxal synthase-like
1 1 1 1 SCOP 110581 Indigoidine synthase A-like
1 1 1 0 SCOP 140931 Fic-like
1 1 1 0 SCOP 101262 Methenyltetrahydrofolate cyclohydrolase-like
1 1 1 0 SCOP 57802 Rubredoxin-like
1 1 1 0 SCOP 55021 ACT-like
1 1 1 1 SCOP 56507 Methionine synthase activation domain-like
1 1 1 1 SCOP 51703 Cobalamin (vitamin B12)-dependent enzymes
1 1 1 0 SCOP 101473 DhaL-like
1 1 1 1 SCOP 111326 Urocanase
1 1 1 0 SCOP 50486 FMT C-terminal domain-like
1 1 1 0 SCOP 64076 MTH938-like
1 1 1 1 SCOP 56534 Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
1 1 1 1 SCOP 56726 DNA topoisomerase IV, alpha subunit
1 1 1 0 SCOP 160631 SMI1/KNR4-like
1 1 1 1 SCOP 160920 PSTPO5379-like
1 1 1 0 SCOP 46950 Double-stranded DNA-binding domain
1 1 1 0 SCOP 50346 PRC-barrel domain
1 1 1 1 SCOP 46548 alpha-helical ferredoxin
1 1 1 0 SCOP 69819 MTH1598-like
1 1 1 1 SCOP 55287 RPB5-like RNA polymerase subunit
1 1 1 0 SCOP 143437 THUMP domain-like
1 1 1 0 SCOP 116820 Rps17e-like
1 1 1 0 SCOP 160374 RplX-like
1 1 1 0 SCOP 69695 SRP19
1 1 1 0 SCOP 63867 MoeA C-terminal domain-like
1 1 1 0 SCOP 46589 tRNA-binding arm
1 1 1 0 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
1 1 1 0 SCOP 53706 Formate dehydrogenase/DMSO reductase, domains 1-3
1 1 1 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
1 1 1 1 SCOP 56512 Nitric oxide (NO) synthase oxygenase domain
1 1 1 0 SCOP 48619 Phospholipase A2, PLA2
1 1 1 1 SCOP 82114 Riboflavin kinase-like
1 1 1 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
1 1 1 0 SCOP 160443 SMR domain-like
1 1 1 0 SCOP 69304 Tricorn protease N-terminal domain
1 1 1 1 SCOP 102645 CoaB-like
1 1 1 0 SCOP 159034 Mib/herc2 domain-like
1 1 1 0 SCOP 54821 Ribosomal protein S3 C-terminal domain
1 1 1 1 SCOP 56719 Type II DNA topoisomerase
1 1 1 1 SCOP 142877 EndoU-like
1 1 1 0 SCOP 69360 Cell wall binding repeat
1 1 1 1 SCOP 52935 PK C-terminal domain-like
1 1 1 0 SCOP 81336 F1F0 ATP synthase subunit A
1 1 1 1 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
1 1 1 0 SCOP 144206 NOB1 zinc finger-like
1 1 1 1 SCOP 68923 PEP carboxykinase N-terminal domain
1 1 1 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
1 1 1 0 SCOP 56037 PheT/TilS domain
1 1 1 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
1 1 1 1 SCOP 63999 Thiamin pyrophosphokinase, catalytic domain
1 1 1 0 SCOP 58022 XRCC4, C-terminal oligomerization domain
1 1 1 0 SCOP 81464 Cytochrome c oxidase subunit II-like, transmembrane region
1 1 1 0 SCOP 161093 MgtE membrane domain-like
1 1 1 0 SCOP 141673 MOSC N-terminal domain-like
1 1 1 0 SCOP 142984 Nqo1 middle domain-like
1 1 1 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
1 1 1 1 SCOP 110111 Ctag/Cox11
1 1 1 0 SCOP 81585 PsbU/PolX domain-like
1 1 1 1 SCOP 110019 ERO1-like
1 1 1 1 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
1 1 1 1 SCOP 53623 MurD-like peptide ligases, catalytic domain
1 1 1 1 SCOP 53920 Fe-only hydrogenase
1 1 1 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
1 1 1 0 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
1 1 1 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
1 1 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
1 1 1 0 SCOP 90002 Hypothetical protein YjiA, C-terminal domain
1 1 1 0 SCOP 47144 HSC20 (HSCB), C-terminal oligomerisation domain
1 1 1 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
1 1 1 0 SCOP 46604 Epsilon subunit of F1F0-ATP synthase C-terminal domain
1 1 1 0 SCOP 110836 Hypothetical protein SAV1430
1 1 1 1 SCOP 101887 Apyrase
1 1 1 1 SCOP 63882 MoeA N-terminal region -like
1 1 1 1 SCOP 55637 Cell cycle regulatory proteins
1 1 1 0 SCOP 101278 N-terminal domain of adenylylcyclase associated protein, CAP
1 1 1 0 SCOP 90250 Troponin coil-coiled subunits
1 1 1 0 SCOP 101494 Stathmin
1 1 1 0 SCOP 47933 ERP29 C domain-like
1 1 1 0 SCOP 81624 N-terminal domain of MutM-like DNA repair proteins
1 1 1 0 SCOP 54782 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
1 1 1 0 SCOP 140490 Nqo1C-terminal domain-like
1 1 1 0 SCOP 48092 Transcription factor STAT-4 N-domain
1 1 1 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
1 1 1 1 SCOP 47446 Signal peptide-binding domain
1 1 1 1 SCOP 56542 Substrate-binding domain of HMG-CoA reductase
1 1 1 0 SCOP 54991 Anticodon-binding domain of PheRS
1 1 1 0 SCOP 55271 DNA repair protein MutS, domain I
1 1 1 1 SCOP 116742 eIF2alpha middle domain-like
1 1 1 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
1 1 1 0 SCOP 46596 Eukaryotic DNA topoisomerase I, dispensable insert domain
1 1 1 0 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
1 1 1 0 SCOP 160696 BTG domain-like
1 1 1 0 SCOP 111357 Mitochondrial ATP synthase coupling factor 6
1 1 1 0 SCOP 69203 Nucleoplasmin-like core domain
1 1 1 0 SCOP 69761 GTP cyclohydrolase I feedback regulatory protein, GFRP
1 1 1 0 SCOP 50353 Cytokine
1 1 1 1 SCOP 89817 Mago nashi protein
1 1 1 0 SCOP 56854 Bcl-2 inhibitors of programmed cell death
1 1 1 0 SCOP 49410 Alpha-macroglobulin receptor domain
1 1 1 1 SCOP 47798 Barrier-to-autointegration factor, BAF
1 1 1 0 SCOP 118359 Expressed protein At2g23090/F21P24.15
1 1 1 0 SCOP 47938 Functional domain of the splicing factor Prp18
1 1 1 1 SCOP 50723 Core binding factor beta, CBF
1 1 1 0 SCOP 57924 Inhibitor of apoptosis (IAP) repeat
1 1 1 0 SCOP 49303 beta-Galactosidase/glucuronidase domain
1 1 1 1 SCOP 140984 PTPA-like
1 1 1 0 SCOP 158639 ENT-like
1 1 1 1 SCOP 55481 N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
1 1 1 0 SCOP 161065 ATP synthase D chain-like
1 1 1 1 SCOP 47668 N-terminal domain of cbl (N-cbl)
1 1 1 1 SCOP 140102 ISY1 domain-like
1 1 1 0 SCOP 101288 L27 domain
1 1 1 0 SCOP 81531 Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 48340 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
1 1 1 0 SCOP 140864 TROVE domain-like
1 1 1 1 SCOP 143875 ERH-like
1 1 1 0 SCOP 103107 Hypothetical protein c14orf129, hspc210
1 1 1 0 SCOP 140361 MIT domain-like
1 1 1 0 SCOP 48479 Cytochrome c oxidase subunit E
1 1 1 0 SCOP 90188 Somatomedin B domain
1 1 1 1 SCOP 142019 Nqo1 FMN-binding domain-like
1 1 1 0 SCOP 57586 TNF receptor-like
1 1 1 0 SCOP 143791 DUSP-like
1 1 1 0 SCOP 64593 Intermediate filament protein, coiled coil region
1 1 1 1 SCOP 109925 Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain
1 1 1 0 SCOP 57016 Plant lectins/antimicrobial peptides
1 1 1 0 SCOP 54529 Mitochondrial glycoprotein MAM33-like
1 1 1 0 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
1 1 1 0 SCOP 54511 GFP-like
1 1 1 1 SCOP 64158 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
1 1 1 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
1 1 1 1 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
1 1 1 0 SCOP 161060 ATP synthase B chain-like
1 1 1 0 SCOP 144292 occludin/ELL-like
1 1 1 1 SCOP 110993 eIF-2-alpha, C-terminal domain
1 1 1 0 SCOP 47040 Kix domain of CBP (creb binding protein)
1 1 1 1 SCOP 89942 eEF1-gamma domain
1 1 1 1 SCOP 143885 RGC domain-like
1 1 1 0 SCOP 102848 NSFL1 (p97 ATPase) cofactor p47, SEP domain
1 1 1 0 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
1 1 1 0 SCOP 160527 V-type ATPase subunit E-like
1 1 1 1 SCOP 82215 C-terminal autoproteolytic domain of nucleoporin nup98
1 1 1 0 SCOP 53036 Eukaryotic RPB5 N-terminal domain
1 1 1 0 SCOP 47157 Mitochondrial import receptor subunit Tom20
1 1 1 1 SCOP 50989 Clathrin heavy-chain terminal domain
1 1 1 1 SCOP 101391 Hsp90 co-chaperone CDC37
1 1 1 1 SCOP 47212 FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
1 1 1 1 SCOP 81382 Skp1 dimerisation domain-like
1 1 1 0 SCOP 46942 Elongation factor TFIIS domain 2
1 1 1 0 SCOP 140427 VPS28 C-terminal domain-like
1 1 1 0 SCOP 81872 BRCA2 helical domain
1 1 1 0 SCOP 159065 Dom34/Pelota N-terminal domain-like
1 1 1 1 SCOP 110217 DNA-binding protein LAG-1 (CSL)
1 1 1 0 SCOP 51156 Insect cysteine-rich antifreeze protein
1 1 1 0 SCOP 89000 post-HMGL domain-like
1 1 1 1 SCOP 159042 Plus3-like
1 1 1 1 SCOP 88802 Pre-PUA domain
1 1 1 1 SCOP 56741 Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
1 1 1 0 SCOP 140996 Hermes dimerisation domain
1 1 1 0 SCOP 69687 Integrin beta tail domain
1 1 1 0 SCOP 68993 FAT domain of focal adhesion kinase
1 1 1 1 SCOP 63862 Thiamin pyrophosphokinase, substrate-binding domain
1 1 1 0 SCOP 55003 PAP/Archaeal CCA-adding enzyme, C-terminal domain
1 1 1 0 SCOP 140612 EB1 dimerisation domain-like
1 1 1 0 SCOP 102860 mRNA decapping enzyme DcpS N-terminal domain
1 1 1 0 SCOP 101420 C-terminal domain of Ku80
1 1 1 1 SCOP 160897 Taf5 N-terminal domain-like
1 1 1 0 SCOP 64586 C-terminal domain of ProRS
1 1 1 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 160651 FLJ32549 C-terminal domain-like
1 1 1 0 SCOP 56491 A heparin-binding domain
1 1 1 0 SCOP 144270 Eferin C-derminal domain-like
1 1 1 0 SCOP 158235 SOCS box-like
1 1 1 1 SCOP 55035 NAD-binding domain of HMG-CoA reductase
1 1 1 0 SCOP 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain
1 1 1 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 1 1 SCOP 63433 Fumarylacetoacetate hydrolase, FAH, N-terminal domain
1 1 1 0 SCOP 101821 Aminopeptidase/glucanase lid domain
1 1 1 0 SCOP 47802 DNA polymerase beta, N-terminal domain-like
1 1 1 1 SCOP 101224 HAND domain of the nucleosome remodeling ATPase ISWI
1 1 1 1 SCOP 160088 NRDP1 C-terminal domain-like
1 1 1 0 SCOP 109728 Hypothetical protein AF0491, middle domain
1 1 1 0 SCOP 57770 Methionyl-tRNA synthetase (MetRS), Zn-domain
1 1 1 0 SCOP 55267 tRNA-intron endonuclease N-terminal domain-like
1 1 1 0 SCOP 52913 RNA 3'-terminal phosphate cyclase, RPTC, insert domain
1 1 1 0 SCOP 140125 Rabenosyn-5 Rab-binding domain-like
1 1 1 0 SCOP 81878 BRCA2 tower domain
1 1 1 0 SCOP 109805 Phenylalanine zipper
1 1 1 0 SCOP 101283 GRIP domain
1 1 1 0 SCOP 109880 A middle domain of Talin 1
1 1 1 0 SCOP 111469 Geminin coiled-coil domain
1 1 1 0 SCOP 140482 MAST3 pre-PK domain-like

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.