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  Home > Genomes > Superfamily assignments for Aegilops tauschii 22


Aegilops tauschii 22 superfamily assignments

Taxonomy
Taxonomy browser entry

Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops; Aegilops tauschii

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Fasta format sequences
Domain assignments

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Assignment statistics

Sequences: 33849 total
20395 (60 %) with assignment
401 average length
44 % amino acid coverage
Domains: 29326 total
940 unique superfamilies
730 unique families
293 average length
31.2 average superfamily size
97 % formed by duplication
Domain combinations: 1195 domain pairs
4037 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies
2055 1735 300 11 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
1864 1775 271 4 SCOP 56112 Protein kinase-like (PK-like)
1572 1209 218 1 SCOP 52058 L domain-like
1307 1280 113 0 SCOP 81383 F-box domain
876 819 155 0 SCOP 52047 RNI-like
540 522 14 1 SCOP 48264 Cytochrome P450
472 403 98 2 SCOP 57850 RING/U-box
436 421 67 8 SCOP 51735 NAD(P)-binding Rossmann-fold domains
410 347 95 10 SCOP 48371 ARM repeat
404 338 72 2 SCOP 48452 TPR-like
384 362 51 2 SCOP 46689 Homeodomain-like
380 374 24 9 SCOP 53474 alpha/beta-Hydrolases
375 353 37 1 SCOP 49599 TRAF domain-like
369 351 43 1 SCOP 54695 POZ domain
358 257 67 1 SCOP 54928 RNA-binding domain, RBD
348 298 38 16 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
345 327 16 4 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
335 307 19 0 SCOP 103473 MFS general substrate transporter
282 270 51 8 SCOP 51445 (Trans)glycosidases
277 245 41 4 SCOP 52833 Thioredoxin-like
266 257 31 8 SCOP 54001 Cysteine proteinases
248 236 62 1 SCOP 50978 WD40 repeat-like
244 233 35 3 SCOP 49899 Concanavalin A-like lectins/glucanases
232 142 39 1 SCOP 101936 DNA-binding pseudobarrel domain
229 142 17 2 SCOP 49503 Cupredoxins
225 218 7 1 SCOP 48113 Heme-dependent peroxidases
212 201 21 3 SCOP 51197 Clavaminate synthase-like
198 184 39 1 SCOP 48403 Ankyrin repeat
195 157 36 5 SCOP 51905 FAD/NAD(P)-binding domain
171 164 51 4 SCOP 53098 Ribonuclease H-like
168 121 30 0 SCOP 57667 beta-beta-alpha zinc fingers
165 158 36 1 SCOP 47473 EF-hand
163 151 44 2 SCOP 46785 "Winged helix" DNA-binding domain
162 154 11 1 SCOP 50630 Acid proteases
160 94 11 2 SCOP 53901 Thiolase-like
159 158 8 2 SCOP 47113 Histone-fold
157 153 19 0 SCOP 51110 alpha-D-mannose-specific plant lectins
151 111 54 5 SCOP 50249 Nucleic acid-binding proteins
150 146 7 2 SCOP 47699 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
148 148 6 0 SCOP 47459 HLH, helix-loop-helix DNA-binding domain
147 103 14 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
142 75 23 4 SCOP 53067 Actin-like ATPase domain
141 139 44 7 SCOP 56784 HAD-like
140 114 15 1 SCOP 54171 DNA-binding domain
132 130 5 2 SCOP 50685 Barwin-like endoglucanases
128 69 22 1 SCOP 90123 ABC transporter transmembrane region
124 115 14 5 SCOP 53383 PLP-dependent transferases
124 118 9 1 SCOP 101941 NAC domain
122 87 33 1 SCOP 49562 C2 domain (Calcium/lipid-binding domain, CaLB)
121 120 16 5 SCOP 53448 Nucleotide-diphospho-sugar transferases
116 114 15 1 SCOP 47616 GST C-terminal domain-like
114 107 8 5 SCOP 51182 RmlC-like cupins
106 81 13 3 SCOP 48239 Terpenoid cyclases/Protein prenyltransferases
106 103 14 1 SCOP 52743 Subtilisin-like
106 92 11 1 SCOP 118290 WRKY DNA-binding domain
104 100 7 3 SCOP 51126 Pectin lyase-like
104 103 5 1 SCOP 52266 SGNH hydrolase
104 92 48 0 SCOP 57903 FYVE/PHD zinc finger
97 92 30 1 SCOP 46565 Chaperone J-domain
95 94 6 0 SCOP 101148 Plant invertase/pectin methylesterase inhibitor
93 85 38 3 SCOP 54236 Ubiquitin-like
93 56 16 1 SCOP 47954 Cyclin-like
88 86 11 1 SCOP 81606 PP2C-like
86 86 4 0 SCOP 55455 SRF-like
84 71 13 0 SCOP 55008 HMA, heavy metal-associated domain
82 82 6 1 SCOP 49590 PHL pollen allergen
78 61 16 1 SCOP 50129 GroES-like
78 62 19 1 SCOP 50494 Trypsin-like serine proteases
76 76 14 3 SCOP 48576 Terpenoid synthases
74 74 13 0 SCOP 50965 Galactose oxidase, central domain
73 70 20 2 SCOP 54495 UBC-like
70 60 23 2 SCOP 55961 Bet v1-like
70 65 6 1 SCOP 56574 Serpins
67 46 16 0 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
67 66 12 4 SCOP 56300 Metallo-dependent phosphatases
66 60 8 1 SCOP 56801 Acetyl-CoA synthetase-like
65 58 18 0 SCOP 81901 HCP-like
65 65 29 1 SCOP 53300 vWA-like
64 61 41 8 SCOP 54211 Ribosomal protein S5 domain 2-like
64 64 11 0 SCOP 57196 EGF/Laminin
64 64 5 0 SCOP 57959 Leucine zipper domain
62 38 22 1 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
62 49 26 0 SCOP 49354 PapD-like
61 61 10 3 SCOP 49764 HSP20-like chaperones
61 58 18 2 SCOP 56176 FAD-binding/transporter-associated domain-like
61 34 23 0 SCOP 90229 CCCH zinc finger
60 55 24 3 SCOP 52374 Nucleotidylyl transferase
60 48 20 2 SCOP 49785 Galactose-binding domain-like
60 59 18 0 SCOP 54277 CAD & PB1 domains
59 58 23 2 SCOP 82199 SET domain
55 55 19 3 SCOP 52402 Adenine nucleotide alpha hydrolases-like
54 53 9 1 SCOP 103506 Mitochondrial carrier
54 44 25 0 SCOP 57756 Retrovirus zinc finger-like domains
53 50 6 2 SCOP 48208 Six-hairpin glycosidases
53 51 8 1 SCOP 74788 Cullin repeat-like
52 49 29 3 SCOP 50729 PH domain-like
51 50 13 0 SCOP 52172 CheY-like
51 51 29 3 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
51 49 20 1 SCOP 117281 Kelch motif
50 30 23 1 SCOP 55021 ACT-like
48 46 11 4 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
48 36 18 0 SCOP 54631 CBS-domain pair
48 47 23 1 SCOP 81665 Calcium ATPase, transmembrane domain M
47 46 27 2 SCOP 50447 Translation proteins
44 41 23 2 SCOP 56219 DNase I-like
44 31 19 0 SCOP 54768 dsRNA-binding domain-like
43 42 8 2 SCOP 54518 Tubby C-terminal domain-like
43 43 10 1 SCOP 49870 Osmotin, thaumatin-like protein
42 41 33 4 SCOP 56672 DNA/RNA polymerases
40 38 6 1 SCOP 81338 Aquaporin-like
40 40 13 1 SCOP 53850 Periplasmic binding protein-like II
40 37 6 1 SCOP 103511 Chlorophyll a-b binding protein
40 38 17 0 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
40 40 2 1 SCOP 54654 CI-2 family of serine protease inhibitors
39 37 24 2 SCOP 55681 Class II aaRS and biotin synthetases
39 37 13 2 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
39 39 8 1 SCOP 75005 Arabinanase/levansucrase/invertase
39 27 18 0 SCOP 52113 BRCT domain
39 39 18 1 SCOP 81653 Calcium ATPase, transduction domain A
38 29 7 0 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
38 37 12 2 SCOP 74650 Galactose mutarotase-like
38 34 11 1 SCOP 51101 Mannose-binding lectins
37 34 6 1 SCOP 51430 NAD(P)-linked oxidoreductase
37 36 7 1 SCOP 81382 Skp1 dimerisation domain-like
36 30 11 4 SCOP 52096 ClpP/crotonase
36 34 18 4 SCOP 53187 Zn-dependent exopeptidases
36 36 5 0 SCOP 63829 Calcium-dependent phosphotriesterase
36 35 26 2 SCOP 81296 E set domains
35 18 11 1 SCOP 56024 Phospholipase D/nuclease
35 35 8 1 SCOP 52087 CRAL/TRIO domain
35 34 3 1 SCOP 141562 At5g01610-like
34 22 15 6 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
34 28 12 0 SCOP 58038 SNARE fusion complex
34 32 14 1 SCOP 54427 NTF2-like
34 34 19 1 SCOP 88697 PUA domain-like
34 33 8 1 SCOP 52777 CoA-dependent acyltransferases
33 32 6 1 SCOP 51395 FMN-linked oxidoreductases
33 29 15 0 SCOP 81324 Voltage-gated potassium channels
33 26 10 2 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
33 18 10 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
32 31 12 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
32 32 9 1 SCOP 48464 ENTH/VHS domain
31 30 7 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
31 28 17 0 SCOP 50985 RCC1/BLIP-II
31 31 12 3 SCOP 64356 SNARE-like
31 12 9 2 SCOP 55753 Actin depolymerizing proteins
31 29 15 1 SCOP 51206 cAMP-binding domain-like
31 30 9 1 SCOP 53955 Lysozyme-like
31 26 5 0 SCOP 82153 FAS1 domain
31 12 10 1 SCOP 63411 LuxS/MPP-like metallohydrolase
31 31 17 1 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
31 16 5 0 SCOP 47923 Ypt/Rab-GAP domain of gyp1p
30 27 6 1 SCOP 75304 Amidase signature (AS) enzymes
30 29 16 3 SCOP 52799 (Phosphotyrosine protein) phosphatases II
30 26 16 0 SCOP 46934 UBA-like
29 26 18 4 SCOP 56059 Glutathione synthetase ATP-binding domain-like
29 27 13 1 SCOP 50104 Translation proteins SH3-like domain
29 29 7 2 SCOP 53137 Translational machinery components
29 22 15 2 SCOP 51695 PLC-like phosphodiesterases
29 26 8 2 SCOP 52821 Rhodanese/Cell cycle control phosphatase
29 21 9 1 SCOP 54534 FKBP-like
29 27 17 2 SCOP 81301 Nucleotidyltransferase
29 28 7 0 SCOP 53822 Periplasmic binding protein-like I
29 29 14 1 SCOP 51011 Glycosyl hydrolase domain
29 29 10 4 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
29 28 13 2 SCOP 52029 GroEL apical domain-like
29 29 17 3 SCOP 63380 Riboflavin synthase domain-like
29 29 4 0 SCOP 57095 Scorpion toxin-like
28 25 8 2 SCOP 52218 Flavoproteins
28 26 15 6 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
28 16 10 0 SCOP 75471 YhbY-like
28 28 11 3 SCOP 54373 FAD-linked reductases, C-terminal domain
27 24 14 2 SCOP 52317 Class I glutamine amidotransferase-like
27 25 10 0 SCOP 50156 PDZ domain-like
27 27 4 0 SCOP 56371 Ribosome inactivating proteins (RIP)
27 27 10 1 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
27 27 6 0 SCOP 46938 CRAL/TRIO N-terminal domain
26 25 10 5 SCOP 51569 Aldolase
26 25 5 2 SCOP 48557 L-aspartase-like
26 24 6 2 SCOP 53720 ALDH-like
26 25 7 2 SCOP 56281 Metallo-hydrolase/oxidoreductase
26 26 6 1 SCOP 50182 Sm-like ribonucleoproteins
26 26 8 1 SCOP 55103 FAD-linked oxidases, C-terminal domain
26 16 11 0 SCOP 90209 Ran binding protein zinc finger-like
26 26 10 1 SCOP 101690 PAZ domain
25 25 7 3 SCOP 53613 Ribokinase-like
25 25 3 1 SCOP 54403 Cystatin/monellin
25 25 6 0 SCOP 57184 Growth factor receptor domain
24 24 7 1 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
24 22 7 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
24 23 11 1 SCOP 56104 SAICAR synthase-like
24 24 3 1 SCOP 49777 PEBP-like
24 14 10 1 SCOP 54980 EF-G C-terminal domain-like
24 23 7 1 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
24 24 10 1 SCOP 52025 PA domain
24 24 8 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
24 21 10 0 SCOP 54849 GroEL-intermediate domain like
23 22 5 1 SCOP 48484 Lipoxigenase
23 22 5 1 SCOP 55797 PR-1-like
23 23 11 0 SCOP 82171 DPP6 N-terminal domain-like
23 21 9 1 SCOP 48592 GroEL equatorial domain-like
23 22 6 0 SCOP 50405 Actin-crosslinking proteins
23 23 6 1 SCOP 140990 FtsH protease domain-like
23 23 11 1 SCOP 101447 Formin homology 2 domain (FH2 domain)
22 20 10 2 SCOP 55120 Pseudouridine synthase
22 20 8 1 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
22 21 14 0 SCOP 63748 Tudor/PWWP/MBT
22 22 9 0 SCOP 47370 Bromodomain
22 21 6 0 SCOP 89009 GAT-like domain
21 20 8 4 SCOP 51366 Ribulose-phoshate binding barrel
21 20 8 2 SCOP 53254 Phosphoglycerate mutase-like
21 21 3 2 SCOP 52151 FabD/lysophospholipase-like
21 20 9 1 SCOP 47576 Calponin-homology domain, CH-domain
21 14 6 2 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
21 15 11 1 SCOP 55785 PYP-like sensor domain (PAS domain)
21 21 5 1 SCOP 49363 Purple acid phosphatase, N-terminal domain
20 19 7 0 SCOP 111331 NAD kinase/diacylglycerol kinase-like
20 18 6 2 SCOP 48150 DNA-glycosylase
20 20 9 1 SCOP 54292 2Fe-2S ferredoxin-like
20 20 5 1 SCOP 55811 Nudix
20 20 12 1 SCOP 50891 Cyclophilin-like
20 17 6 0 SCOP 57783 Zinc beta-ribbon
20 20 10 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
19 15 7 2 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
19 18 5 1 SCOP 102405 MCP/YpsA-like
19 18 7 1 SCOP 52279 Beta-D-glucan exohydrolase, C-terminal domain
19 19 10 1 SCOP 81631 PAP/OAS1 substrate-binding domain
19 13 11 0 SCOP 54160 Chromo domain-like
19 19 5 1 SCOP 49723 Lipase/lipooxygenase domain (PLAT/LH2 domain)
18 18 9 4 SCOP 51556 Metallo-dependent hydrolases
18 17 4 1 SCOP 56655 Carbohydrate phosphatase
18 18 9 1 SCOP 56399 ADP-ribosylation
18 17 6 1 SCOP 52490 Tubulin nucleotide-binding domain-like
18 11 9 0 SCOP 82185 Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
18 18 4 1 SCOP 103612 SBT domain
17 17 11 2 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
17 14 7 0 SCOP 57997 Tropomyosin
17 13 6 1 SCOP 117070 LEA14-like
17 9 7 0 SCOP 50199 Staphylococcal nuclease
17 17 6 0 SCOP 47661 t-snare proteins
17 12 4 1 SCOP 57247 Bowman-Birk inhibitor, BBI
17 12 8 0 SCOP 57889 Cysteine-rich domain
17 11 7 0 SCOP 57016 Plant lectins/antimicrobial peptides
16 13 7 2 SCOP 53271 PRTase-like
16 14 10 1 SCOP 53633 Carbamate kinase-like
16 16 7 2 SCOP 55315 L30e-like
16 16 3 1 SCOP 51069 Carbonic anhydrase
16 11 7 0 SCOP 50370 Ricin B-like lectins
16 15 4 1 SCOP 55307 Tubulin C-terminal domain-like
16 16 5 1 SCOP 55031 Bacterial exopeptidase dimerisation domain
15 15 3 2 SCOP 47240 Ferritin-like
15 13 7 2 SCOP 102114 Radical SAM enzymes
15 14 4 1 SCOP 47226 Histidine-containing phosphotransfer domain, HPT domain
15 14 6 2 SCOP 52768 Arginase/deacetylase
15 15 4 1 SCOP 55724 Mog1p/PsbP-like
15 15 6 1 SCOP 49879 SMAD/FHA domain
15 11 7 0 SCOP 69065 RNase III domain-like
15 12 9 1 SCOP 47592 SWIB/MDM2 domain
15 5 1 1 SCOP 55973 S-adenosylmethionine synthetase
15 13 10 1 SCOP 52440 PreATP-grasp domain
15 15 4 0 SCOP 101967 Adhesin YadA, collagen-binding domain
15 15 2 0 SCOP 117892 Band 7/SPFH domain
15 15 4 0 SCOP 118310 AN1-like Zinc finger
14 12 6 0 SCOP 47095 HMG-box
14 14 4 0 SCOP 51306 LexA/Signal peptidase
14 13 6 2 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
14 13 5 0 SCOP 144091 Rhomboid-like
14 13 4 0 SCOP 117856 AF0104/ALDC/Ptd012-like
14 14 8 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
14 8 4 0 SCOP 88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors
14 14 7 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
14 13 9 4 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
14 13 7 1 SCOP 56719 Type II DNA topoisomerase
14 11 2 1 SCOP 47874 Annexin
14 7 4 1 SCOP 81736 Group V grass pollen allergen
14 10 6 1 SCOP 47862 Saposin
14 9 6 0 SCOP 51045 WW domain
14 14 4 1 SCOP 54585 Cdc48 domain 2-like
13 13 7 1 SCOP 55920 Creatinase/aminopeptidase
13 13 4 1 SCOP 51283 dUTPase-like
13 12 6 1 SCOP 55856 Cytochrome b5-like heme/steroid binding domain
13 13 10 1 SCOP 52954 Class II aaRS ABD-related
13 13 8 1 SCOP 51230 Single hybrid motif
13 11 7 1 SCOP 81340 Clc chloride channel
13 12 7 4 SCOP 52467 DHS-like NAD/FAD-binding domain
13 13 5 0 SCOP 63825 YWTD domain
13 12 10 0 SCOP 81995 beta-sandwich domain of Sec23/24
13 13 5 1 SCOP 56327 LDH C-terminal domain-like
13 13 4 0 SCOP 47676 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
13 12 10 1 SCOP 82754 C-terminal, gelsolin-like domain of Sec23/24
12 12 8 1 SCOP 88723 PIN domain-like
12 12 3 1 SCOP 50692 ADC-like
12 10 10 0 SCOP 49452 Starch-binding domain-like
12 11 5 0 SCOP 48019 post-AAA+ oligomerization domain-like
12 11 8 0 SCOP 55060 GHMP Kinase, C-terminal domain
12 12 5 0 SCOP 57863 ArfGap/RecO-like zinc finger
12 12 6 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
12 10 3 0 SCOP 50386 STI-like
11 11 5 0 SCOP 57829 Zn-binding ribosomal proteins
11 11 3 1 SCOP 53784 Phosphofructokinase
11 11 9 0 SCOP 54862 4Fe-4S ferredoxins
11 11 5 1 SCOP 53649 Alkaline phosphatase-like
11 11 8 0 SCOP 47819 HRDC-like
11 9 7 1 SCOP 55781 GAF domain-like
11 11 2 0 SCOP 52091 SpoIIaa-like
11 8 6 1 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
11 11 7 0 SCOP 50800 PK beta-barrel domain-like
11 10 5 1 SCOP 82704 AlbA-like
11 7 5 2 SCOP 47203 Acyl-CoA dehydrogenase C-terminal domain-like
11 11 7 0 SCOP 101898 NHL repeat
11 10 5 0 SCOP 54106 LysM domain
11 11 7 0 SCOP 47384 Homodimeric domain of signal transducing histidine kinase
11 11 7 1 SCOP 56204 Hect, E3 ligase catalytic domain
10 10 5 1 SCOP 51161 Trimeric LpxA-like enzymes
10 10 7 2 SCOP 109604 HD-domain/PDEase-like
10 8 3 1 SCOP 56815 Sec1/munc18-like (SM) proteins
10 10 1 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
10 6 4 1 SCOP 53590 Nucleoside hydrolase
10 10 3 0 SCOP 46579 Prefoldin
10 10 5 1 SCOP 56317 Carbon-nitrogen hydrolase
10 9 3 1 SCOP 55239 RuBisCO, small subunit
10 10 5 0 SCOP 161111 Cation efflux protein transmembrane domain-like
10 10 6 0 SCOP 75011 3-carboxy-cis,cis-mucoante lactonizing enzyme
10 8 6 0 SCOP 55666 Ribonuclease PH domain 2-like
10 2 2 0 SCOP 81698 FF domain
10 10 8 0 SCOP 55277 GYF domain
10 9 7 1 SCOP 81811 Helical domain of Sec23/24
9 7 5 2 SCOP 54197 HIT-like
9 9 8 0 SCOP 103657 BAR/IMD domain-like
9 9 5 2 SCOP 100950 NagB/RpiA/CoA transferase-like
9 9 3 0 SCOP 47336 ACP-like
9 8 6 1 SCOP 75217 alpha/beta knot
9 6 5 0 SCOP 144000 Oxysterol-binding protein-like
9 9 9 1 SCOP 50022 ISP domain
9 9 5 2 SCOP 51604 Enolase C-terminal domain-like
9 8 4 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
9 9 8 1 SCOP 56003 Molybdenum cofactor-binding domain
9 9 6 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
9 9 4 1 SCOP 48537 Phospholipase C/P1 nuclease
9 9 6 0 SCOP 52935 PK C-terminal domain-like
9 9 7 0 SCOP 68906 SAP domain
9 6 5 1 SCOP 56042 PurM C-terminal domain-like
9 9 4 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
9 9 6 0 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
9 9 8 0 SCOP 55447 CO dehydrogenase flavoprotein C-terminal domain-like
9 5 4 1 SCOP 55326 PurM N-terminal domain-like
9 9 4 0 SCOP 48350 GTPase activation domain, GAP
9 9 5 1 SCOP 49447 Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
9 9 4 0 SCOP 57414 Hairpin loop containing domain-like
9 8 4 0 SCOP 54529 Mitochondrial glycoprotein MAM33-like
9 5 3 0 SCOP 47762 PAH2 domain
9 7 6 0 SCOP 50382 Agglutinin
8 8 5 2 SCOP 53927 Cytidine deaminase-like
8 7 4 1 SCOP 56808 Ribosomal protein L1
8 8 6 0 SCOP 55174 Alpha-L RNA-binding motif
8 8 3 1 SCOP 50324 Inorganic pyrophosphatase
8 8 3 0 SCOP 51316 Mss4-like
8 7 7 1 SCOP 50715 Ribosomal protein L25-like
8 7 5 1 SCOP 50475 FMN-binding split barrel
8 8 4 2 SCOP 46626 Cytochrome c
8 7 3 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
8 8 5 2 SCOP 55931 Glutamine synthetase/guanido kinase
8 6 2 1 SCOP 54909 Dimeric alpha+beta barrel
8 8 4 1 SCOP 101112 Oxygen-evolving enhancer protein 3,
8 7 6 1 SCOP 50993 Peptidase/esterase 'gauge' domain
8 8 5 0 SCOP 69322 Tricorn protease domain 2
8 8 5 2 SCOP 52922 TK C-terminal domain-like
8 8 7 1 SCOP 54665 CO dehydrogenase molybdoprotein N-domain-like
8 8 3 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
8 5 5 1 SCOP 56053 Ribosomal protein L6
8 4 4 1 SCOP 53738 Phosphoglucomutase, first 3 domains
8 8 5 1 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
8 8 5 1 SCOP 81271 TGS-like
8 8 2 0 SCOP 103243 KA1-like
8 5 4 0 SCOP 57933 TAZ domain
8 8 6 0 SCOP 55003 PAP/Archaeal CCA-adding enzyme, C-terminal domain
8 8 2 0 SCOP 140383 BSD domain-like
7 6 4 2 SCOP 53697 SIS domain
7 6 4 1 SCOP 54999 Ribosomal protein S10
7 7 5 0 SCOP 52980 Restriction endonuclease-like
7 6 4 0 SCOP 55129 Ribosomal protein L30p/L7e
7 7 5 1 SCOP 51419 PLP-binding barrel
7 6 5 1 SCOP 48256 Citrate synthase
7 7 2 0 SCOP 54648 DLC
7 7 3 1 SCOP 48439 Protein prenylyltransferase
7 7 1 1 SCOP 111352 Ammonium transporter
7 7 3 1 SCOP 88946 Sigma2 domain of RNA polymerase sigma factors
7 6 4 1 SCOP 53732 Aconitase iron-sulfur domain
7 6 5 1 SCOP 48173 Cryptochrome/photolyase FAD-binding domain
7 6 5 1 SCOP 51338 Composite domain of metallo-dependent hydrolases
7 7 5 2 SCOP 56645 Acyl-CoA dehydrogenase NM domain-like
7 6 4 1 SCOP 50814 Lipocalins
7 7 5 1 SCOP 55186 ThrRS/AlaRS common domain
7 7 3 1 SCOP 55895 Ribonuclease Rh-like
7 6 3 1 SCOP 54826 Enolase N-terminal domain-like
7 7 6 0 SCOP 144232 HIT/MYND zinc finger-like
7 7 6 1 SCOP 47741 CO dehydrogenase ISP C-domain like
7 6 5 1 SCOP 49348 Clathrin adaptor appendage domain
7 7 2 0 SCOP 110004 Glycolipid transfer protein, GLTP
7 6 4 0 SCOP 109905 Surp module (SWAP domain)
7 7 5 1 SCOP 48425 Sec7 domain
7 7 4 1 SCOP 75632 Cullin homology domain
7 7 3 0 SCOP 50784 Transcription factor IIA (TFIIA), beta-barrel domain
7 7 6 0 SCOP 159042 Plus3-like
7 7 5 0 SCOP 82919 Zn-finger domain of Sec23/24
6 6 2 1 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
6 6 2 1 SCOP 50193 Ribosomal protein L14
6 6 4 1 SCOP 55282 RL5-like
6 5 2 1 SCOP 103491 Preprotein translocase SecY subunit
6 6 4 0 SCOP 46946 S13-like H2TH domain
6 6 4 0 SCOP 110324 Ribosomal L27 protein-like
6 6 2 1 SCOP 75620 Release factor
6 6 1 1 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
6 6 2 1 SCOP 52313 Ribosomal protein S2
6 5 5 0 SCOP 52949 Macro domain-like
6 6 3 0 SCOP 144122 Tim10-like
6 5 5 0 SCOP 47027 Acyl-CoA binding protein
6 6 2 1 SCOP 53056 beta-carbonic anhydrase, cab
6 6 5 1 SCOP 52016 LeuD/IlvD-like
6 6 3 0 SCOP 54736 ClpS-like
6 6 5 1 SCOP 52425 Cryptochrome/photolyase, N-terminal domain
6 5 3 0 SCOP 55136 Probable bacterial effector-binding domain
6 5 3 0 SCOP 55287 RPB5-like RNA polymerase subunit
6 6 6 0 SCOP 53092 Creatinase/prolidase N-terminal domain
6 5 3 1 SCOP 55979 DNA clamp
6 6 5 1 SCOP 51246 Rudiment single hybrid motif
6 6 5 0 SCOP 81923 Double Clp-N motif
6 5 5 1 SCOP 51971 Nucleotide-binding domain
6 6 6 0 SCOP 48334 DNA repair protein MutS, domain III
6 6 5 0 SCOP 117289 Nucleoporin domain
6 3 2 1 SCOP 55945 TATA-box binding protein-like
6 6 5 0 SCOP 56973 Aerolisin/ETX pore-forming domain
6 4 4 1 SCOP 158702 Sec63 N-terminal domain-like
6 6 3 0 SCOP 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
6 6 6 1 SCOP 81837 BEACH domain
6 6 5 0 SCOP 82708 R3H domain
6 6 4 0 SCOP 47769 SAM/Pointed domain
6 6 5 0 SCOP 63491 BAG domain
6 6 4 0 SCOP 54368 Glutamine synthetase, N-terminal domain
6 6 4 0 SCOP 57277 Granulin repeat
6 6 4 0 SCOP 110942 HSP90 C-terminal domain
6 6 3 0 SCOP 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
5 5 3 1 SCOP 52166 Ribosomal protein L4
5 5 2 0 SCOP 54843 Ribosomal protein L22
5 5 3 1 SCOP 53748 Phosphoglycerate kinase
5 5 3 0 SCOP 160369 Ribosomal protein L10-like
5 4 3 0 SCOP 81333 F1F0 ATP synthase subunit C
5 5 4 1 SCOP 52161 Ribosomal protein L13
5 5 5 2 SCOP 55821 YrdC/RibB
5 4 4 1 SCOP 64005 Undecaprenyl diphosphate synthase
5 5 1 1 SCOP 55205 EPT/RTPC-like
5 3 2 0 SCOP 48140 Ribosomal protein L19 (L19e)
5 4 3 1 SCOP 48613 Heme oxygenase-like
5 3 2 2 SCOP 51726 UROD/MetE-like
5 4 3 2 SCOP 54506 Diaminopimelate epimerase-like
5 3 3 1 SCOP 69645 Arp2/3 complex subunits
5 5 2 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
5 4 2 1 SCOP 118203 Vacuolar ATP synthase subunit C
5 5 3 0 SCOP 47072 Cysteine alpha-hairpin motif
5 5 4 0 SCOP 55257 RBP11-like subunits of RNA polymerase
5 5 4 1 SCOP 55159 eIF1-like
5 5 4 0 SCOP 64268 PX domain
5 5 2 1 SCOP 53800 Chelatase
5 5 2 1 SCOP 161077 Photosystem II antenna protein-like
5 5 3 0 SCOP 47413 lambda repressor-like DNA-binding domains
5 4 4 1 SCOP 54447 ssDNA-binding transcriptional regulator domain
5 5 2 0 SCOP 50952 Soluble quinoprotein glucose dehydrogenase
5 5 2 0 SCOP 54626 Chalcone isomerase
5 5 4 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
5 5 2 1 SCOP 102198 Putative cyclase
5 5 5 0 SCOP 46589 tRNA-binding arm
5 5 2 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
5 5 3 0 SCOP 160443 SMR domain-like
5 3 3 1 SCOP 56014 Nitrite and sulphite reductase 4Fe-4S domain-like
5 5 4 0 SCOP 55658 L9 N-domain-like
5 5 3 1 SCOP 48056 Di-copper centre-containing domain
5 5 4 1 SCOP 48225 Seven-hairpin glycosidases
5 5 3 1 SCOP 47446 Signal peptide-binding domain
5 5 2 1 SCOP 48445 14-3-3 protein
5 5 5 0 SCOP 46774 ARID-like
5 5 2 0 SCOP 47396 Transcription factor IIA (TFIIA), alpha-helical domain
5 5 5 0 SCOP 158573 GINS helical bundle-like
5 2 2 0 SCOP 49303 beta-Galactosidase/glucuronidase domain
5 5 4 0 SCOP 158639 ENT-like
5 5 2 1 SCOP 55481 N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
5 5 4 0 SCOP 144074 E2F-DP heterodimerization region
5 5 2 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
5 5 4 0 SCOP 75553 Smc hinge domain
5 5 3 0 SCOP 53036 Eukaryotic RPB5 N-terminal domain
5 5 5 0 SCOP 50916 Rap30/74 interaction domains
5 5 2 1 SCOP 63887 P-domain of calnexin/calreticulin
5 5 3 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
4 4 2 0 SCOP 53167 Purine and uridine phosphorylases
4 4 2 1 SCOP 53790 Tetrapyrrole methylase
4 4 2 1 SCOP 53178 Peptidyl-tRNA hydrolase-like
4 4 2 0 SCOP 52080 Ribosomal proteins L15p and L18e
4 2 2 0 SCOP 56214 4'-phosphopantetheinyl transferase
4 4 3 1 SCOP 82649 SufE/NifU
4 4 2 0 SCOP 47060 S15/NS1 RNA-binding domain
4 4 3 0 SCOP 54995 Ribosomal protein S6
4 4 1 0 SCOP 52042 Ribosomal protein L32e
4 4 3 1 SCOP 53328 Formyltransferase
4 4 3 1 SCOP 56322 ADC synthase
4 4 3 1 SCOP 57798 Casein kinase II beta subunit
4 4 3 0 SCOP 54897 Protease propeptides/inhibitors
4 4 4 1 SCOP 56019 The spindle assembly checkpoint protein mad2
4 4 2 0 SCOP 52972 ITPase-like
4 4 1 1 SCOP 111126 Ligand-binding domain in the NO signalling and Golgi transport
4 4 4 0 SCOP 50044 SH3-domain
4 4 2 1 SCOP 143113 NAP-like
4 4 2 1 SCOP 55418 eIF4e-like
4 4 2 2 SCOP 55909 Pentein
4 3 2 1 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
4 4 3 1 SCOP 51998 PFL-like glycyl radical enzymes
4 4 3 0 SCOP 141571 Pentapeptide repeat-like
4 4 3 0 SCOP 102712 JAB1/MPN domain
4 4 2 0 SCOP 55331 Tautomerase/MIF
4 4 4 1 SCOP 56524 Oxidoreductase molybdopterin-binding domain
4 3 2 0 SCOP 89550 PHP domain-like
4 4 3 0 SCOP 110857 Gamma-glutamyl cyclotransferase-like
4 4 3 2 SCOP 54913 GlnB-like
4 3 2 1 SCOP 48600 Chorismate mutase II
4 3 3 1 SCOP 101386 all-alpha NTP pyrophosphatases
4 4 3 0 SCOP 47781 RuvA domain 2-like
4 4 2 1 SCOP 56726 DNA topoisomerase IV, alpha subunit
4 4 3 1 SCOP 102462 Peptidyl-tRNA hydrolase II
4 4 3 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
4 4 4 0 SCOP 69304 Tricorn protease N-terminal domain
4 4 4 0 SCOP 142921 WGR domain-like
4 4 3 1 SCOP 52210 Succinyl-CoA synthetase domains
4 4 3 0 SCOP 141673 MOSC N-terminal domain-like
4 4 3 1 SCOP 53623 MurD-like peptide ligases, catalytic domain
4 4 4 0 SCOP 52075 Outer arm dynein light chain 1
4 4 2 0 SCOP 144083 Magnesium transport protein CorA, transmembrane region
4 4 2 0 SCOP 75689 Zinc-binding domain of translation initiation factor 2 beta
4 4 2 0 SCOP 100966 Translation initiation factor 2 beta, aIF2beta, N-terminal domain
4 2 2 1 SCOP 55124 Nitrite/Sulfite reductase N-terminal domain-like
4 4 1 0 SCOP 55545 beta-N-acetylhexosaminidase-like domain
4 2 1 0 SCOP 55394 Bactericidal permeability-increasing protein, BPI
4 4 2 0 SCOP 47895 Transducin (alpha subunit), insertion domain
4 4 4 0 SCOP 63570 PABC (PABP) domain
4 4 2 1 SCOP 88798 N-terminal, heterodimerisation domain of RBP7 (RpoE)
4 4 4 0 SCOP 47672 Transferrin receptor-like dimerisation domain
4 4 3 0 SCOP 48340 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
4 4 4 0 SCOP 47050 VHP, Villin headpiece domain
4 2 2 0 SCOP 110993 eIF-2-alpha, C-terminal domain
4 2 2 0 SCOP 54416 Amine oxidase N-terminal region
4 4 3 1 SCOP 81822 RuBisCo LSMT C-terminal, substrate-binding domain
4 4 3 0 SCOP 46942 Elongation factor TFIIS domain 2
4 4 2 0 SCOP 159065 Dom34/Pelota N-terminal domain-like
4 4 3 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
4 4 4 0 SCOP 55711 Subdomain of clathrin and coatomer appendage domain
4 4 4 0 SCOP 161245 Zinc hairpin stack
4 4 4 0 SCOP 160219 AMPKBI-like
4 3 3 1 SCOP 55035 NAD-binding domain of HMG-CoA reductase
4 4 3 0 SCOP 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain
4 4 1 1 SCOP 116768 DNA-binding domain of EIN3-like
4 4 4 0 SCOP 101238 XPC-binding domain
4 4 3 0 SCOP 158230 PRP4-like
3 3 2 0 SCOP 89919 Ribosome-binding factor A, RbfA
3 3 1 0 SCOP 54570 Ribosomal protein S19
3 3 2 1 SCOP 54686 Ribosomal protein L16p/L10e
3 3 2 1 SCOP 56047 Ribosomal protein S8
3 3 3 1 SCOP 64263 Prokaryotic ribosomal protein L17
3 3 3 1 SCOP 53597 Dihydrofolate reductase-like
3 3 2 0 SCOP 143800 L28p-like
3 2 2 1 SCOP 55068 Peptide methionine sulfoxide reductase
3 3 2 1 SCOP 51351 Triosephosphate isomerase (TIM)
3 3 2 1 SCOP 55194 Ribosome recycling factor, RRF
3 3 3 0 SCOP 89360 HesB-like domain
3 2 2 1 SCOP 51713 tRNA-guanine transglycosylase
3 3 2 1 SCOP 56276 S-adenosylmethionine decarboxylase
3 3 3 1 SCOP 142695 RibA-like
3 3 2 0 SCOP 101908 Putative isomerase YbhE
3 3 3 0 SCOP 82657 BolA-like
3 3 3 1 SCOP 81452 Cytochrome c oxidase subunit III-like
3 3 2 0 SCOP 46561 Ribosomal protein L29 (L29p)
3 3 3 1 SCOP 49329 Cu,Zn superoxide dismutase-like
3 3 3 0 SCOP 161219 CHY zinc finger-like
3 3 1 0 SCOP 82282 Homocysteine S-methyltransferase
3 3 3 1 SCOP 88713 Glycoside hydrolase/deacetylase
3 2 2 1 SCOP 69060 Arp2/3 complex 21 kDa subunit ARPC3
3 3 2 1 SCOP 56529 FAH
3 3 3 0 SCOP 58113 Apolipoprotein A-I
3 3 1 1 SCOP 55770 Profilin (actin-binding protein)
3 3 1 1 SCOP 101960 Stabilizer of iron transporter SufD
3 3 2 1 SCOP 46458 Globin-like
3 3 1 0 SCOP 161084 MAPEG domain-like
3 2 2 0 SCOP 46955 Putative DNA-binding domain
3 3 2 0 SCOP 82697 PurS-like
3 3 1 1 SCOP 56349 DNA breaking-rejoining enzymes
3 2 2 0 SCOP 158615 RbcX-like
3 3 1 1 SCOP 53213 LigB-like
3 3 1 0 SCOP 143456 VC0467-like
3 3 2 0 SCOP 51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
3 2 2 0 SCOP 55826 YbaK/ProRS associated domain
3 3 3 1 SCOP 52335 Methylglyoxal synthase-like
3 3 2 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
3 3 3 0 SCOP 57802 Rubredoxin-like
3 3 3 0 SCOP 141130 Acetamidase/Formamidase-like
3 3 1 0 SCOP 89562 RraA-like
3 3 1 1 SCOP 89124 Nop domain
3 3 2 0 SCOP 142535 AF0625-like
3 3 2 0 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
3 3 3 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
3 3 2 0 SCOP 48619 Phospholipase A2, PLA2
3 3 2 0 SCOP 52129 Caspase-like
3 3 1 0 SCOP 49265 Fibronectin type III
3 3 3 0 SCOP 160059 PriA/YqbF domain
3 3 2 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
3 3 3 1 SCOP 63999 Thiamin pyrophosphokinase, catalytic domain
3 3 2 0 SCOP 50621 Alanine racemase C-terminal domain-like
3 3 2 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
3 3 2 0 SCOP 143548 Serine metabolism enzymes domain
3 3 2 0 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
3 3 3 0 SCOP 90002 Hypothetical protein YjiA, C-terminal domain
3 3 3 1 SCOP 49998 Amine oxidase catalytic domain
3 3 3 0 SCOP 69075 Glutamyl tRNA-reductase dimerization domain
3 2 2 0 SCOP 55550 SH2 domain
3 3 2 0 SCOP 102735 Trigger factor ribosome-binding domain
3 3 3 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
3 3 3 1 SCOP 56542 Substrate-binding domain of HMG-CoA reductase
3 3 1 1 SCOP 101152 Mob1/phocein
3 2 2 0 SCOP 109993 VPS9 domain
3 3 2 1 SCOP 69012 alpha-ketoacid dehydrogenase kinase, N-terminal domain
3 3 3 1 SCOP 88688 Families 57/38 glycoside transferase middle domain
3 2 2 1 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
3 3 1 0 SCOP 47040 Kix domain of CBP (creb binding protein)
3 3 2 0 SCOP 160527 V-type ATPase subunit E-like
3 3 2 1 SCOP 82215 C-terminal autoproteolytic domain of nucleoporin nup98
3 3 1 1 SCOP 56741 Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
3 3 3 0 SCOP 63862 Thiamin pyrophosphokinase, substrate-binding domain
3 3 2 0 SCOP 64586 C-terminal domain of ProRS
3 3 2 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
3 3 3 0 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
3 3 2 0 SCOP 109736 FGAM synthase PurL, linker domain
3 3 3 1 SCOP 47587 Domain of poly(ADP-ribose) polymerase
2 2 1 0 SCOP 46911 Ribosomal protein S18
2 2 2 1 SCOP 56420 Peptide deformylase
2 2 1 1 SCOP 74731 Ribosomal protein L20
2 2 2 0 SCOP 141091 L21p-like
2 1 1 1 SCOP 82549 DAK1/DegV-like
2 2 1 0 SCOP 69765 IpsF-like
2 2 2 1 SCOP 51730 FAD-linked oxidoreductase
2 2 1 1 SCOP 56770 HydA/Nqo6-like
2 2 2 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
2 2 2 0 SCOP 144217 CSL zinc finger
2 2 1 0 SCOP 54575 Ribosomal protein L31e
2 2 2 0 SCOP 54762 Signal recognition particle alu RNA binding heterodimer, SRP9/14
2 1 1 0 SCOP 69500 DTD-like
2 2 2 1 SCOP 102886 Coproporphyrinogen III oxidase
2 2 2 1 SCOP 56634 Heme-dependent catalase-like
2 2 2 0 SCOP 52499 Isochorismatase-like hydrolases
2 2 1 1 SCOP 55144 LigT-like
2 2 2 0 SCOP 89895 FYSH domain
2 2 2 1 SCOP 90096 Subunits of heterodimeric actin filament capping protein Capz
2 2 2 0 SCOP 48662 Ribosomal protein L39e
2 2 2 0 SCOP 47694 Cytochrome c oxidase subunit h
2 2 1 0 SCOP 143870 PF0523-like
2 2 2 0 SCOP 53032 tRNA-intron endonuclease catalytic domain-like
2 2 2 0 SCOP 103111 Activator of Hsp90 ATPase, Aha1
2 2 2 0 SCOP 46988 Tubulin chaperone cofactor A
2 2 2 0 SCOP 48690 Epsilon subunit of mitochondrial F1F0-ATP synthase
2 2 2 0 SCOP 81648 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
2 2 1 1 SCOP 81483 Bacterial photosystem II reaction centre, L and M subunits
2 2 2 1 SCOP 101546 ASF1-like
2 2 2 0 SCOP 56601 beta-lactamase/transpeptidase-like
2 2 2 1 SCOP 53795 PEP carboxykinase-like
2 1 1 0 SCOP 118196 YaeB-like
2 2 2 0 SCOP 142754 NadA-like
2 2 2 0 SCOP 103256 Hypothetical protein TM0160
2 2 2 0 SCOP 64167 SurE-like
2 2 2 0 SCOP 55154 CYTH-like phosphatases
2 1 1 1 SCOP 53218 Molybdenum cofactor biosynthesis proteins
2 2 2 0 SCOP 159501 EreA/ChaN-like
2 2 2 0 SCOP 55200 Translation initiation factor IF3, C-terminal domain
2 2 2 0 SCOP 158997 Trm112p-like
2 2 1 0 SCOP 89095 GatB/YqeY motif
2 2 2 1 SCOP 103025 Folate-binding domain
2 2 2 1 SCOP 110069 ApaG-like
2 2 2 1 SCOP 50486 FMT C-terminal domain-like
2 2 2 0 SCOP 69786 YggU-like
2 2 2 1 SCOP 100939 SPOC domain-like
2 2 1 0 SCOP 74784 Translin
2 2 2 0 SCOP 50346 PRC-barrel domain
2 2 2 1 SCOP 111321 AF1104-like
2 2 2 1 SCOP 54984 eEF-1beta-like
2 2 2 1 SCOP 46548 alpha-helical ferredoxin
2 2 1 0 SCOP 160374 RplX-like
2 1 1 1 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
2 1 1 0 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
2 2 2 0 SCOP 143865 CorA soluble domain-like
2 2 2 1 SCOP 69336 Alpha subunit of glutamate synthase, C-terminal domain
2 2 2 0 SCOP 52200 Toll/Interleukin receptor TIR domain
2 1 1 0 SCOP 69318 Integrin alpha N-terminal domain
2 1 1 0 SCOP 89372 Fucose-specific lectin
2 2 2 1 SCOP 102645 CoaB-like
2 2 2 0 SCOP 49344 CBD9-like
2 2 1 0 SCOP 54821 Ribosomal protein S3 C-terminal domain
2 2 2 0 SCOP 55234 Cyanase C-terminal domain
2 2 1 1 SCOP 142877 EndoU-like
2 2 2 0 SCOP 118116 DNA mismatch repair protein MutL
2 2 2 0 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
2 2 2 1 SCOP 68923 PEP carboxykinase N-terminal domain
2 2 2 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
2 2 1 0 SCOP 69055 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
2 2 2 0 SCOP 56037 PheT/TilS domain
2 2 2 0 SCOP 47090 PGBD-like
2 2 2 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
2 2 2 0 SCOP 81891 Poly A polymerase C-terminal region-like
2 2 2 1 SCOP 54810 GMP synthetase C-terminal dimerisation domain
2 2 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
2 2 2 1 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
2 1 1 0 SCOP 101278 N-terminal domain of adenylylcyclase associated protein, CAP
2 2 1 0 SCOP 47794 Rad51 N-terminal domain-like
2 2 2 0 SCOP 81624 N-terminal domain of MutM-like DNA repair proteins
2 2 2 0 SCOP 54752 RecA protein, C-terminal domain
2 2 2 0 SCOP 101576 Supernatant protein factor (SPF), C-terminal domain
2 2 2 0 SCOP 55271 DNA repair protein MutS, domain I
2 2 2 0 SCOP 116742 eIF2alpha middle domain-like
2 2 2 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
2 2 2 1 SCOP 69000 FAD-dependent thiol oxidase
2 2 2 0 SCOP 47938 Functional domain of the splicing factor Prp18
2 2 2 0 SCOP 82051 Obg GTP-binding protein N-terminal domain
2 2 2 0 SCOP 81531 Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
2 2 1 1 SCOP 143875 ERH-like
2 2 2 0 SCOP 50911 Mannose 6-phosphate receptor domain
2 2 2 0 SCOP 143791 DUSP-like
2 2 1 1 SCOP 64158 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
2 2 1 1 SCOP 117018 ATP-dependent DNA ligase DNA-binding domain
2 2 2 1 SCOP 89942 eEF1-gamma domain
2 2 2 0 SCOP 140111 Endosomal sorting complex assembly domain
2 2 1 0 SCOP 102848 NSFL1 (p97 ATPase) cofactor p47, SEP domain
2 2 1 0 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
2 2 2 0 SCOP 109715 DEK C-terminal domain
2 2 2 1 SCOP 50989 Clathrin heavy-chain terminal domain
2 2 2 0 SCOP 143503 PUG domain-like
2 2 2 1 SCOP 69340 C-terminal domain of adenylylcyclase associated protein
2 2 2 0 SCOP 140612 EB1 dimerisation domain-like
2 2 2 0 SCOP 160897 Taf5 N-terminal domain-like
2 2 1 0 SCOP 55653 Ribosomal protein L9 C-domain
2 2 2 0 SCOP 54364 Translation initiation factor IF3, N-terminal domain
2 2 2 0 SCOP 47802 DNA polymerase beta, N-terminal domain-like
2 2 2 0 SCOP 101224 HAND domain of the nucleosome remodeling ATPase ISWI
2 2 2 0 SCOP 47055 TAF(II)230 TBP-binding fragment
1 1 1 0 SCOP 56731 DNA primase core
1 1 1 0 SCOP 48013 NusB-like
1 1 1 1 SCOP 47973 Ribosomal protein S7
1 1 1 0 SCOP 82607 YbaB-like
1 1 1 0 SCOP 57840 Ribosomal protein L36
1 1 1 0 SCOP 143034 L35p-like
1 1 1 1 SCOP 55831 Thymidylate synthase/dCMP hydroxymethylase
1 1 1 1 SCOP 51658 Xylose isomerase-like
1 1 1 1 SCOP 75625 YebC-like
1 1 1 0 SCOP 109998 Triger factor/SurA peptide-binding domain-like
1 1 1 0 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
1 1 1 0 SCOP 54565 Ribosomal protein S16
1 1 1 1 SCOP 103263 Chorismate synthase, AroC
1 1 1 1 SCOP 55298 YjgF-like
1 1 1 1 SCOP 52121 Lumazine synthase
1 1 1 0 SCOP 117991 YbeD/HP0495-like
1 1 1 0 SCOP 55469 FMN-dependent nitroreductase-like
1 1 1 0 SCOP 81321 Family A G protein-coupled receptor-like
1 1 1 0 SCOP 141678 MAL13P1.257-like
1 1 1 0 SCOP 110296 Oligoxyloglucan reducing end-specific cellobiohydrolase
1 1 1 0 SCOP 142897 TFB5-like
1 1 1 0 SCOP 103456 Preprotein translocase SecE subunit
1 1 1 0 SCOP 140718 Mediator hinge subcomplex-like
1 1 1 0 SCOP 81524 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 111278 SSo0622-like
1 1 1 0 SCOP 81411 Mitochondrial cytochrome c oxidase subunit VIa
1 1 1 0 SCOP 159468 AtpF-like
1 1 1 0 SCOP 63393 RNA polymerase subunits
1 1 1 0 SCOP 55248 PCD-like
1 1 1 0 SCOP 69103 Arp2/3 complex 16 kDa subunit ARPC5
1 1 1 0 SCOP 51645 Malate synthase G
1 1 1 0 SCOP 81508 Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 53639 AraD/HMP-PK domain-like
1 1 1 0 SCOP 140959 Indolic compounds 2,3-dioxygenase-like
1 1 1 0 SCOP 103486 V-type ATP synthase subunit C
1 1 1 1 SCOP 64153 YjeF N-terminal domain-like
1 1 1 1 SCOP 46924 RNA polymerase subunit RPB10
1 1 1 0 SCOP 69618 HemD-like
1 1 1 0 SCOP 143447 AMMECR1-like
1 1 1 0 SCOP 52788 Phosphotyrosine protein phosphatases I
1 1 1 1 SCOP 63562 RPB6/omega subunit-like
1 1 1 1 SCOP 81442 Cytochrome c oxidase subunit I-like
1 1 1 0 SCOP 141734 HisI-like
1 1 1 0 SCOP 81342 Transmembrane di-heme cytochromes
1 1 1 1 SCOP 64234 Photosystem I subunit PsaD
1 1 1 1 SCOP 81536 Subunit III of photosystem I reaction centre, PsaF
1 1 1 0 SCOP 81563 Photosystem I reaction center subunit X, PsaK
1 1 1 1 SCOP 81568 Photosystem I reaction center subunit XI, PsaL
1 1 1 0 SCOP 49478 Cna protein B-type domain
1 1 1 0 SCOP 111038 YjbQ-like
1 1 1 1 SCOP 55040 Molybdenum cofactor biosynthesis protein C, MoaC
1 1 1 1 SCOP 51717 Dihydropteroate synthetase-like
1 1 1 0 SCOP 55718 SCP-like
1 1 1 1 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
1 1 1 1 SCOP 56266 DmpA/ArgJ-like
1 1 1 0 SCOP 58100 Bacterial hemolysins
1 1 1 0 SCOP 82771 GIY-YIG endonuclease
1 1 1 0 SCOP 53807 "Helical backbone" metal receptor
1 1 1 0 SCOP 55083 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
1 1 1 0 SCOP 101744 Rof/RNase P subunit-like
1 1 1 0 SCOP 103441 PetM subunit of the cytochrome b6f complex
1 1 1 1 SCOP 143990 YbiA-like
1 1 1 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
1 1 1 0 SCOP 54690 Molybdopterin synthase subunit MoaE
1 1 1 0 SCOP 140663 TTHA0068-like
1 1 1 0 SCOP 54111 Urease, gamma-subunit
1 1 1 1 SCOP 51278 Urease, beta-subunit
1 1 1 0 SCOP 143081 BB1717-like
1 1 1 1 SCOP 51391 Thiamin phosphate synthase
1 1 1 0 SCOP 109910 YgfY-like
1 1 1 0 SCOP 49472 Transthyretin (synonym: prealbumin)
1 1 1 1 SCOP 158694 UraD-Like
1 1 1 0 SCOP 110916 Peptidyl-tRNA hydrolase domain-like
1 1 1 0 SCOP 102588 LmbE-like
1 1 1 0 SCOP 160909 ATP12-like
1 1 1 0 SCOP 56747 Prim-pol domain
1 1 1 1 SCOP 110581 Indigoidine synthase A-like
1 1 1 0 SCOP 53182 Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
1 1 1 1 SCOP 101473 DhaL-like
1 1 1 1 SCOP 51219 TRAP-like
1 1 1 0 SCOP 64076 MTH938-like
1 1 1 1 SCOP 56925 OMPA-like
1 1 1 0 SCOP 142764 YgbK-like
1 1 1 0 SCOP 69754 Ribosome binding protein Y (YfiA homologue)
1 1 1 0 SCOP 50939 Sialidases
1 1 1 0 SCOP 48695 Multiheme cytochromes
1 1 1 0 SCOP 160104 Acetoacetate decarboxylase-like
1 1 1 0 SCOP 158710 PSPTO4464-like
1 1 1 0 SCOP 69349 Phage fibre proteins
1 1 1 0 SCOP 160631 SMI1/KNR4-like
1 1 1 0 SCOP 46950 Double-stranded DNA-binding domain
1 1 1 0 SCOP 143437 THUMP domain-like
1 1 1 0 SCOP 116820 Rps17e-like
1 1 1 0 SCOP 63867 MoeA C-terminal domain-like
1 1 1 0 SCOP 158832 Tex N-terminal region-like
1 1 1 0 SCOP 53706 Formate dehydrogenase/DMSO reductase, domains 1-3
1 1 1 0 SCOP 50960 TolB, C-terminal domain
1 1 1 0 SCOP 55608 Homing endonucleases
1 1 1 1 SCOP 82114 Riboflavin kinase-like
1 1 1 0 SCOP 102110 (2r)-phospho-3-sulfolactate synthase ComA
1 1 1 0 SCOP 58104 Methyl-accepting chemotaxis protein (MCP) signaling domain
1 1 1 1 SCOP 52009 Phosphohistidine domain
1 1 1 0 SCOP 81336 F1F0 ATP synthase subunit A
1 1 1 0 SCOP 49464 Carboxypeptidase regulatory domain-like
1 1 1 0 SCOP 90257 Myosin rod fragments
1 1 1 0 SCOP 144206 NOB1 zinc finger-like
1 1 1 0 SCOP 158745 LanC-like
1 1 1 0 SCOP 82679 N-utilization substance G protein NusG, N-terminal domain
1 1 1 0 SCOP 56436 C-type lectin-like
1 1 1 0 SCOP 49373 Invasin/intimin cell-adhesion fragments
1 1 1 0 SCOP 75704 Mitotic arrest deficient-like 1, Mad1
1 1 1 0 SCOP 58022 XRCC4, C-terminal oligomerization domain
1 1 1 0 SCOP 142984 Nqo1 middle domain-like
1 1 1 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
1 1 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
1 1 1 1 SCOP 110111 Ctag/Cox11
1 1 1 0 SCOP 81585 PsbU/PolX domain-like
1 1 1 1 SCOP 110019 ERO1-like
1 1 1 1 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
1 1 1 0 SCOP 51120 beta-Roll
1 1 1 0 SCOP 68912 Rho N-terminal domain-like
1 1 1 1 SCOP 53920 Fe-only hydrogenase
1 1 1 1 SCOP 101904 GyrA/ParC C-terminal domain-like
1 1 1 1 SCOP 140869 GUN4-like
1 1 1 0 SCOP 47144 HSC20 (HSCB), C-terminal oligomerisation domain
1 1 1 0 SCOP 110836 Hypothetical protein SAV1430
1 1 1 0 SCOP 63418 MurE/MurF N-terminal domain
1 1 1 0 SCOP 110921 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
1 1 1 1 SCOP 63882 MoeA N-terminal region -like
1 1 1 1 SCOP 55637 Cell cycle regulatory proteins
1 1 1 0 SCOP 141259 CarD-like
1 1 1 0 SCOP 82861 Mechanosensitive channel protein MscS (YggB), transmembrane region
1 1 1 0 SCOP 55116 Formiminotransferase domain of formiminotransferase-cyclodeaminase.
1 1 1 0 SCOP 47933 ERP29 C domain-like
1 1 1 1 SCOP 55957 Phosphoglucomutase, C-terminal domain
1 1 1 0 SCOP 54782 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
1 1 1 0 SCOP 140490 Nqo1C-terminal domain-like
1 1 1 1 SCOP 141493 Allene oxide cyclase-like
1 1 1 1 SCOP 143975 IlvD/EDD N-terminal domain-like
1 1 1 0 SCOP 74924 Cap-Gly domain
1 1 1 0 SCOP 55904 Ornithine decarboxylase C-terminal domain
1 1 1 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
1 1 1 0 SCOP 50923 Hemopexin-like domain
1 1 1 1 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
1 1 1 1 SCOP 89817 Mago nashi protein
1 1 1 1 SCOP 118359 Expressed protein At2g23090/F21P24.15
1 1 1 0 SCOP 82109 MIR domain
1 1 1 1 SCOP 140984 PTPA-like
1 1 1 0 SCOP 116846 MIT domain
1 1 1 0 SCOP 161065 ATP synthase D chain-like
1 1 1 0 SCOP 140102 ISY1 domain-like
1 1 1 0 SCOP 140106 Calcyclin-binding protein-like
1 1 1 0 SCOP 103107 Hypothetical protein c14orf129, hspc210
1 1 1 0 SCOP 140856 USP8 N-terminal domain-like
1 1 1 1 SCOP 142019 Nqo1 FMN-binding domain-like
1 1 1 0 SCOP 55261 GAD domain-like
1 1 1 0 SCOP 101233 PWI domain
1 1 1 0 SCOP 50809 XRCC4, N-terminal domain
1 1 1 0 SCOP 57774 Microbial and mitochondrial ADK, insert "zinc finger" domain
1 1 1 0 SCOP 63724 Cytolysin/lectin
1 1 1 0 SCOP 88645 ssDNA viruses
1 1 1 1 SCOP 57429 Crambin-like
1 1 1 0 SCOP 100897 Plant proteinase inhibitors
1 1 1 1 SCOP 51649 RuBisCo, C-terminal domain
1 1 1 1 SCOP 54966 RuBisCO, large subunit, small (N-terminal) domain
1 1 1 1 SCOP 109920 Hypothetical protein At3g22680
1 1 1 0 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
1 1 1 0 SCOP 69742 Glutamyl tRNA-reductase catalytic, N-terminal domain
1 1 1 0 SCOP 81886 Helical scaffold and wing domains of SecA
1 1 1 0 SCOP 54556 Chitinase insertion domain
1 1 1 1 SCOP 47212 FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
1 1 1 0 SCOP 140427 VPS28 C-terminal domain-like
1 1 1 0 SCOP 81872 BRCA2 helical domain
1 1 1 0 SCOP 101931 Pym (Within the bgcn gene intron protein, WIBG), N-terminal domain
1 1 1 0 SCOP 69848 LCCL domain
1 1 1 0 SCOP 49758 Calpain large subunit, middle domain (domain III)
1 1 1 0 SCOP 101420 C-terminal domain of Ku80
1 1 1 0 SCOP 116878 TrmE connector domain
1 1 1 0 SCOP 140586 Dcp2 domain-like
1 1 1 1 SCOP 49441 Cytochrome f, large domain
1 1 1 0 SCOP 101790 Aminomethyltransferase beta-barrel domain
1 1 1 0 SCOP 143517 TRCF domain-like
1 1 1 0 SCOP 81496 Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
1 1 1 0 SCOP 81502 ISP transmembrane anchor
1 1 1 1 SCOP 63433 Fumarylacetoacetate hydrolase, FAH, N-terminal domain
1 1 1 0 SCOP 101821 Aminopeptidase/glucanase lid domain
1 1 1 0 SCOP 53150 DNA repair protein MutS, domain II
1 1 1 0 SCOP 81767 Pre-protein crosslinking domain of SecA
1 1 1 0 SCOP 81799 Putative methyltransferase TM0872, insert domain
1 1 1 0 SCOP 102741 Obg GTP-binding protein C-terminal domain
1 1 1 0 SCOP 109728 Hypothetical protein AF0491, middle domain
1 1 1 0 SCOP 46915 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
1 1 1 0 SCOP 160996 HI0933 insert domain-like
1 1 1 0 SCOP 57770 Methionyl-tRNA synthetase (MetRS), Zn-domain
1 1 1 0 SCOP 81878 BRCA2 tower domain

Jump to [ Top of page · Assignment statistics ]


The following superfamilies have one or more weak hits:

SCOP superfamily Troponin coil-coiled subunits
SCOP superfamily Dimerization motif of sir4
SCOP superfamily Zinc finger domain of DNA polymerase-alpha
SCOP superfamily Notch domain
SCOP superfamily Neurotransmitter-gated ion-channel transmembrane pore
SCOP superfamily Inhibitor of vertebrate lysozyme, Ivy
SCOP superfamily CoA-transferase family III (CaiB/BaiF)
SCOP superfamily L-sulfolactate dehydrogenase-like
SCOP superfamily Baseplate structural protein gp8
SCOP superfamily Gametocyte protein Pfg27
SCOP superfamily Antibiotic binding domain of TipA-like multidrug resistance regulators
SCOP superfamily Cobalamin adenosyltransferase-like
SCOP superfamily Positive stranded ssRNA viruses
SCOP superfamily Cysteine-rich DNA binding domain, (DM domain)
SCOP superfamily TSP-1 type 1 repeat
SCOP superfamily Replication modulator SeqA, C-terminal DNA-binding domain
SCOP superfamily Polo-box domain
SCOP superfamily Tp47 lipoprotein, N-terminal domain
SCOP superfamily Heme chaperone CcmE
SCOP superfamily BAH domain
SCOP superfamily Viral chemokine binding protein m3
SCOP superfamily Calcium-mediated lectin
SCOP superfamily N-terminal domain of bifunctional PutA protein
SCOP superfamily C-terminal domain of DFF45/ICAD (DFF-C domain)
SCOP superfamily Crustacean CHH/MIH/GIH neurohormone
SCOP superfamily beta-catenin-interacting protein ICAT
SCOP superfamily F1F0 ATP synthase subunit B, membrane domain
SCOP superfamily Cytochrome c oxidase subunit II-like, transmembrane region
SCOP superfamily Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
SCOP superfamily Mitochondrial cytochrome c oxidase subunit IV
SCOP superfamily ABC transporter involved in vitamin B12 uptake, BtuC
SCOP superfamily Fumarate reductase respiratory complex transmembrane subunits
SCOP superfamily Gated mechanosensitive channel
SCOP superfamily Rad50 coiled-coil Zn hook
SCOP superfamily Chemotaxis phosphatase CheZ
SCOP superfamily Archaeal IMP cyclohydrolase PurO
SCOP superfamily Putative transcriptional regulator TM1602, C-terminal domain
SCOP superfamily YhbC-like, N-terminal domain
SCOP superfamily Rotavirus NSP2 fragment, C-terminal domain
SCOP superfamily DsrEFH-like
SCOP superfamily Dipeptidyl peptidase I (cathepsin C), exclusion domain
SCOP superfamily Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha)
SCOP superfamily Variable surface antigen VlsE
SCOP superfamily TolA/TonB C-terminal domain
SCOP superfamily C-terminal domain of PLC-beta
SCOP superfamily Eea1 homodimerisation domain
SCOP superfamily Head and neck region of the ectodomain of NDV fusion glycoprotein
SCOP superfamily OMPT-like
SCOP superfamily NSP3 homodimer
SCOP superfamily Cell wall binding repeat
SCOP superfamily Quinohemoprotein amine dehydrogenase A chain, domain 3
SCOP superfamily Phage tail proteins
SCOP superfamily Nucleoplasmin-like core domain
SCOP superfamily Integrin domains
SCOP superfamily AhpD-like
SCOP superfamily Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain
SCOP superfamily Anti-sigma factor AsiA
SCOP superfamily Hypothetical protein YjbJ
SCOP superfamily F1 ATPase inhibitor, IF1, C-terminal domain
SCOP superfamily Intermediate filament protein, coiled coil region
SCOP superfamily Phase 1 flagellin
SCOP superfamily YopH tyrosine phosphatase N-terminal domain
SCOP superfamily CNF1/YfiH-like putative cysteine hydrolases
SCOP superfamily Hsp33 domain
SCOP superfamily Cell-division protein ZipA, C-terminal domain
SCOP superfamily SirA-like
SCOP superfamily Chorismate lyase-like
SCOP superfamily DHH phosphoesterases
SCOP superfamily Dipeptide transport protein
SCOP superfamily Precorrin-8X methylmutase CbiC/CobH
SCOP superfamily Pyridoxine 5'-phosphate synthase
SCOP superfamily Methuselah ectodomain
SCOP superfamily Ribonuclease domain of colicin E3
SCOP superfamily Sortase
SCOP superfamily SAND domain-like
SCOP superfamily Ganglioside M2 (gm2) activator
SCOP superfamily Olfactory marker protein
SCOP superfamily Frizzled cysteine-rich domain
SCOP superfamily Type I dockerin domain
SCOP superfamily Oligomerization domain of hepatitis delta antigen
SCOP superfamily Variant surface glycoprotein (N-terminal domain)
SCOP superfamily Virus ectodomain
SCOP superfamily Influenza hemagglutinin (stalk)
SCOP superfamily N-terminal coiled coil domain from apc
SCOP superfamily Fibritin
SCOP superfamily Outer membrane lipoprotein
SCOP superfamily Delta-sleep-inducing peptide immunoreactive peptide
SCOP superfamily Fibrinogen coiled-coil and central regions
SCOP superfamily Assembly domain of cartilage oligomeric matrix protein
SCOP superfamily Inhibitor of apoptosis (IAP) repeat
SCOP superfamily Zn-binding domains of ADDBP
SCOP superfamily Ada DNA repair protein, N-terminal domain (N-Ada 10)
SCOP superfamily Zinc domain conserved in yeast copper-regulated transcription factors
SCOP superfamily Metallothionein
SCOP superfamily B-box zinc-binding domain
SCOP superfamily Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
SCOP superfamily Hypothetical protein MTH1184
SCOP superfamily Zn2/Cys6 DNA-binding domain
SCOP superfamily HIPIP (high potential iron protein)
SCOP superfamily HIV-1 VPU cytoplasmic domain
SCOP superfamily Carboxypeptidase inhibitor
SCOP superfamily Thyroglobulin type-1 domain
SCOP superfamily FnI-like domain
SCOP superfamily Antifungal protein (AGAFP)
SCOP superfamily Heparin-binding domain from vascular endothelial growth factor
SCOP superfamily TB module/8-cys domain
SCOP superfamily Serine protease inhibitors
SCOP superfamily Blood coagulation inhibitor (disintegrin)
SCOP superfamily Trefoil
SCOP superfamily LDL receptor-like module
SCOP superfamily BPTI-like
SCOP superfamily Elafin-like
SCOP superfamily Cyclotides
SCOP superfamily Insulin-like
SCOP superfamily Anthrax protective antigen
SCOP superfamily Viral glycoprotein, central and dimerisation domains
SCOP superfamily Leukocidin-like
SCOP superfamily Outer membrane efflux proteins (OEP)
SCOP superfamily Porins
SCOP superfamily Colicin
SCOP superfamily Upper collar protein gp10 (connector protein)
SCOP superfamily Prismane protein-like
SCOP superfamily HydB/Nqo4-like
SCOP superfamily Replication terminator protein (Tus)
SCOP superfamily Baseplate structural protein gp11
SCOP superfamily Conserved core of transcriptional regulatory protein vp16
SCOP superfamily Penicillin binding protein dimerisation domain
SCOP superfamily Nitric oxide (NO) synthase oxygenase domain
SCOP superfamily Methionine synthase activation domain-like
SCOP superfamily gp120 core
SCOP superfamily SRCR-like
SCOP superfamily N-acetylmuramoyl-L-alanine amidase-like
SCOP superfamily 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
SCOP superfamily CytB endotoxin-like
SCOP superfamily Subtilisin inhibitor
SCOP superfamily Frataxin/Nqo15-like
SCOP superfamily tRNA-intron endonuclease N-terminal domain-like
SCOP superfamily C-terminal domain of arginine repressor
SCOP superfamily Yeast killer toxins
SCOP superfamily Formylmethanofuran:tetrahydromethanopterin formyltransferase
SCOP superfamily Methyl-coenzyme M reductase subunits
SCOP superfamily Killer toxin KP6 alpha-subunit
SCOP superfamily CheY-binding domain of CheA
SCOP superfamily TRADD, N-terminal domain
SCOP superfamily Acylphosphatase/BLUF domain-like
SCOP superfamily Viral DNA-binding domain
SCOP superfamily Pyrimidine nucleoside phosphorylase C-terminal domain
SCOP superfamily MHC antigen-recognition domain
SCOP superfamily Aspartate/glutamate racemase
SCOP superfamily Resolvase-like
SCOP superfamily Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
SCOP superfamily Type II 3-dehydroquinate dehydratase
SCOP superfamily Uracil-DNA glycosylase-like
SCOP superfamily MurCD N-terminal domain
SCOP superfamily Bacterial luciferase-like
SCOP superfamily Hedgehog/intein (Hint) domain
SCOP superfamily Regulatory protein AraC
SCOP superfamily An insect antifreeze protein
SCOP superfamily Insect cysteine-rich antifreeze protein
SCOP superfamily delta-Endotoxin (insectocide), middle domain
SCOP superfamily Nitrous oxide reductase, N-terminal domain
SCOP superfamily Thermostable phytase (3-phytase)
SCOP superfamily Tachylectin-2
SCOP superfamily beta-Barrel protease inhibitors
SCOP superfamily mu transposase, C-terminal domain
SCOP superfamily FucI/AraA C-terminal domain-like
SCOP superfamily CheW-like
SCOP superfamily TIMP-like
SCOP superfamily Cell growth inhibitor/plasmid maintenance toxic component
SCOP superfamily Electron transport accessory proteins
SCOP superfamily Myosin S1 fragment, N-terminal domain
SCOP superfamily Spermadhesin, CUB domain
SCOP superfamily TNF-like
SCOP superfamily ENV polyprotein, receptor-binding domain
SCOP superfamily Viral protein domain
SCOP superfamily Group II dsDNA viruses VP
SCOP superfamily PHM/PNGase F
SCOP superfamily Neurophysin II
SCOP superfamily Carbohydrate-binding domain
SCOP superfamily Actinoxanthin-like
SCOP superfamily PKD domain
SCOP superfamily Immunoglobulin
SCOP superfamily Moesin tail domain
SCOP superfamily Tetraspanin
SCOP superfamily Serum albumin-like
SCOP superfamily Nuclear receptor ligand-binding domain
SCOP superfamily Tetracyclin repressor-like, C-terminal domain
SCOP superfamily gene 59 helicase assembly protein
SCOP superfamily Bacterial muramidases
SCOP superfamily Lipovitellin-phosvitin complex, superhelical domain
SCOP superfamily Ras GEF
SCOP superfamily A virus capsid protein alpha-helical domain
SCOP superfamily Aldehyde ferredoxin oxidoreductase, C-terminal domains
SCOP superfamily Class II MHC-associated invariant chain ectoplasmic trimerization domain
SCOP superfamily Uteroglobin-like
SCOP superfamily LigA subunit of an aromatic-ring-opening dioxygenase LigAB
SCOP superfamily DBL homology domain (DH-domain)
SCOP superfamily Guanido kinase N-terminal domain
SCOP superfamily FliG
SCOP superfamily DEATH domain
SCOP superfamily Iron-dependent repressor protein, dimerization domain
SCOP superfamily Retrovirus capsid protein, N-terminal core domain
SCOP superfamily Wiscott-Aldrich syndrome protein, WASP, C-terminal domain
SCOP superfamily Apolipophorin-III
SCOP superfamily Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
SCOP superfamily Chemotaxis receptor methyltransferase CheR, N-terminal domain
SCOP superfamily Anaphylotoxins (complement system)
SCOP superfamily STAT
SCOP superfamily Insect pheromone/odorant-binding proteins
SCOP superfamily A DNA-binding domain in eukaryotic transcription factors
SCOP superfamily Retrovirus capsid dimerization domain-like
SCOP superfamily Colicin E immunity proteins
SCOP superfamily alpha-catenin/vinculin-like
SCOP superfamily Aspartate receptor, ligand-binding domain
SCOP superfamily Apolipoprotein
SCOP superfamily Mitochondrial import receptor subunit Tom20
SCOP superfamily Diol dehydratase, gamma subunit
SCOP superfamily T4 endonuclease V
SCOP superfamily Spectrin repeat
SCOP superfamily Epsilon subunit of F1F0-ATP synthase C-terminal domain
SCOP superfamily C-terminal UvrC-binding domain of UvrB
SCOP superfamily PspA lactotransferrin-binding region
SCOP superfamily Gam-like
SCOP superfamily RILP dimerisation region
SCOP superfamily E6 C-terminal domain-like
SCOP superfamily YfgJ-like
SCOP superfamily MetI-like
SCOP superfamily MgtE membrane domain-like
SCOP superfamily SNF-like
SCOP superfamily PsbZ-like
SCOP superfamily Viral glycoprotein ectodomain-like
SCOP superfamily SSO1389-like
SCOP superfamily MalF N-terminal region-like
SCOP superfamily Poly(A) polymerase catalytic subunit-like
SCOP superfamily FlhC-like
SCOP superfamily PSTPO5379-like
SCOP superfamily Jann2411-like
SCOP superfamily Rv2827c C-terminal domain-like
SCOP superfamily YugN-like
SCOP superfamily NMB0513-like
SCOP superfamily BLRF2-like
SCOP superfamily SP0830-like
SCOP superfamily Rnp2-like
SCOP superfamily NMB0488-like
SCOP superfamily YcgL-like
SCOP superfamily NRDP1 C-terminal domain-like
SCOP superfamily PH1570-like
SCOP superfamily XkdW-like
SCOP superfamily PrpR receptor domain-like
SCOP superfamily PhnH-like
SCOP superfamily CbiG N-terminal domain-like
SCOP superfamily CobE/GbiG C-terminal domain-like
SCOP superfamily Cgl1923-like
SCOP superfamily TBP-interacting protein-like
SCOP superfamily PA1994-like
SCOP superfamily FomD-like
SCOP superfamily NifT/FixU-like
SCOP superfamily YkvR-like
SCOP superfamily YopX-like
SCOP superfamily NEAT domain-like
SCOP superfamily Lipase chaperone-like
SCOP superfamily PMT central region-like
SCOP superfamily MgtE N-terminal domain-like
SCOP superfamily MG296-like
SCOP superfamily TerB-like
SCOP superfamily Sama2622-like
SCOP superfamily YheA/YmcA-like
SCOP superfamily Jann4075-like
SCOP superfamily AF1862-like
SCOP superfamily DsbB-like
SCOP superfamily Bacillus cereus metalloprotein-like
SCOP superfamily HP0062-like
SCOP superfamily occludin/ELL-like
SCOP superfamily Sec2 N-terminal region
SCOP superfamily MPN010-like
SCOP superfamily TSP9-like
SCOP superfamily Vanabin-like
SCOP superfamily ImpE-like
SCOP superfamily FdhE-like
SCOP superfamily CofE-like
SCOP superfamily GlcG-like
SCOP superfamily YeeU-like
SCOP superfamily ApbE-like
SCOP superfamily STIV B116-like
SCOP superfamily TM1622-like
SCOP superfamily TTP0101/SSO1404-like
SCOP superfamily Transposase IS200-like
SCOP superfamily CcmK-like
SCOP superfamily Nqo5-like
SCOP superfamily Rv2632c-like
SCOP superfamily Ns1 effector domain-like
SCOP superfamily YktB/PF0168-like
SCOP superfamily CinA-like
SCOP superfamily CofD-like
SCOP superfamily AF2212/PG0164-like
SCOP superfamily Bacteriophage trimeric proteins domain
SCOP superfamily Hcp1-like
SCOP superfamily GatD N-terminal domain-like
SCOP superfamily YccV-like
SCOP superfamily Atu1913-like
SCOP superfamily Agglutinin HPA-like
SCOP superfamily ICP-like
SCOP superfamily Glu-tRNAGln amidotransferase C subunit
SCOP superfamily Hermes dimerisation domain
SCOP superfamily Duffy binding domain-like
SCOP superfamily PriB N-terminal domain-like
SCOP superfamily TROVE domain-like
SCOP superfamily Pseudo ankyrin repeat-like
SCOP superfamily Rhabdovirus nucleoprotein-like
SCOP superfamily RUN domain-like
SCOP superfamily IpaD-like
SCOP superfamily YoaC-like
SCOP superfamily Hyaluronidase post-catalytic domain-like
SCOP superfamily FlgN-like
SCOP superfamily BAS1536-like
SCOP superfamily LemA-like
SCOP superfamily PE/PPE dimer-like
SCOP superfamily EsxAB dimer-like
SCOP superfamily MW0975(SA0943)-like
SCOP superfamily YppE-like
SCOP superfamily EF2458-like
SCOP superfamily MxiH-like
SCOP superfamily HSP33 redox switch-like
SCOP superfamily Variant surface glycoprotein MITAT 1.2, VSG 221, C-terminal domain
SCOP superfamily Connexin43
SCOP superfamily Proton glutamate symport protein
SCOP superfamily Phosphoprotein M1, C-terminal domain
SCOP superfamily WWE domain
SCOP superfamily YbjQ-like
SCOP superfamily TM1631-like
SCOP superfamily Hypothetical protein PA1324
SCOP superfamily Hypothetical protein MPN330
SCOP superfamily Avirulence protein AvrPto
SCOP superfamily NADH pyrophosphatase intervening domain
SCOP superfamily TrkA C-terminal domain-like
SCOP superfamily Fzo-like conserved region
SCOP superfamily Geminin coiled-coil domain
SCOP superfamily Resistin
SCOP superfamily Hormone receptor domain
SCOP superfamily Pollen allergen ole e 6
SCOP superfamily OmpH-like
SCOP superfamily Tsx-like channel
SCOP superfamily Rap/Ran-GAP
SCOP superfamily CbiD-like
SCOP superfamily Urocanase
SCOP superfamily Recombination protein RecR
SCOP superfamily Putative modulator of DNA gyrase, PmbA/TldD
SCOP superfamily Hypothetical protein yfbM
SCOP superfamily Sporulation related repeat
SCOP superfamily ParB/Sulfiredoxin
SCOP superfamily Glycerate kinase I
SCOP superfamily AbfB domain
SCOP superfamily BTV NS2-like ssRNA-binding domain
SCOP superfamily DR1885-like metal-binding protein
SCOP superfamily GDNF receptor-like
SCOP superfamily Her-1
SCOP superfamily I/LWEQ domain
SCOP superfamily A middle domain of Talin 1
SCOP superfamily NblA-like
SCOP superfamily CAPPD, an extracellular domain of amyloid beta A4 protein
SCOP superfamily Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain
SCOP superfamily Nickel-containing superoxide dismutase, NiSOD
SCOP superfamily PhoU-like
SCOP superfamily Alpha-hemoglobin stabilizing protein AHSP
SCOP superfamily Glycogen synthesis protein GlgS
SCOP superfamily KorB DNA-binding domain-like
SCOP superfamily DnaK suppressor protein DksA, alpha-hairpin domain
SCOP superfamily Proline/betaine transporter ProP, C-terminal cytoplasmic domain
SCOP superfamily G protein-binding domain
SCOP superfamily Sec-C motif
SCOP superfamily Mini-collagen I, C-terminal domain
SCOP superfamily Plexin repeat
SCOP superfamily Bubble protein
SCOP superfamily Respiratory nitrate reductase 1 gamma chain
SCOP superfamily 2-methylcitrate dehydratase PrpD
SCOP superfamily NinB
SCOP superfamily Suppressor of Fused, N-terminal domain
SCOP superfamily Tombusvirus P19 core protein, VP19
SCOP superfamily NIF3 (NGG1p interacting factor 3)-like
SCOP superfamily RbsD-like
SCOP superfamily F420-dependent methylenetetrahydromethanopterin dehydrogenase (MTD)
SCOP superfamily Creatininase
SCOP superfamily AXH domain
SCOP superfamily YceI-like
SCOP superfamily Stathmin
SCOP superfamily Eukaryotic initiation factor 4f subunit eIF4g, eIF4e-binding domain
SCOP superfamily ADP-ribosylglycohydrolase
SCOP superfamily P40 nucleoprotein
SCOP superfamily Hsp90 co-chaperone CDC37
SCOP superfamily Methenyltetrahydrofolate cyclohydrolase-like
SCOP superfamily KaiA/RbsU domain
SCOP superfamily Docking domain B of the erythromycin polyketide synthase (DEBS)
SCOP superfamily Staphylocoagulase
SCOP superfamily Typo IV secretion system protein TraC
SCOP superfamily IP3 receptor type 1 binding core, domain 2
SCOP superfamily Kazal-type serine protease inhibitors

Jump to [ Top of page · Assignment statistics ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.