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  Home > Genomes > Superfamily assignments for Solanum pimpinellifolium A-1.0


Solanum pimpinellifolium A-1.0 superfamily assignments

Taxonomy
Taxonomy browser entry

Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon; Solanum pimpinellifolium

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Domain assignments

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Assignment statistics

Sequences: 34727 total
18405 (53 %) with assignment
344 average length
42 % amino acid coverage
Domains: 25224 total
993 unique superfamilies
814 unique families
274 average length
25.4 average superfamily size
96 % formed by duplication
Domain combinations: 996 domain pairs
3444 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies
1514 1333 228 11 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
1206 1197 122 4 SCOP 56112 Protein kinase-like (PK-like)
778 615 120 2 SCOP 52058 L domain-like
575 535 75 3 SCOP 57850 RING/U-box
465 436 39 2 SCOP 46689 Homeodomain-like
421 355 75 10 SCOP 48371 ARM repeat
414 321 72 1 SCOP 48452 TPR-like
412 407 41 9 SCOP 51735 NAD(P)-binding Rossmann-fold domains
403 293 54 1 SCOP 54928 RNA-binding domain, RBD
393 390 19 8 SCOP 53474 alpha/beta-Hydrolases
330 324 49 0 SCOP 81383 F-box domain
323 284 82 0 SCOP 52047 RNI-like
310 272 24 15 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
295 258 37 5 SCOP 52833 Thioredoxin-like
289 288 22 9 SCOP 54001 Cysteine proteinases
286 283 13 6 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
284 264 7 0 SCOP 103473 MFS general substrate transporter
282 267 48 1 SCOP 50978 WD40 repeat-like
253 253 4 1 SCOP 48264 Cytochrome P450
234 234 12 2 SCOP 51197 Clavaminate synthase-like
221 186 16 1 SCOP 54171 DNA-binding domain
217 216 26 4 SCOP 53098 Ribonuclease H-like
214 117 15 3 SCOP 49503 Cupredoxins
210 206 38 8 SCOP 51445 (Trans)glycosidases
208 158 57 5 SCOP 50249 Nucleic acid-binding proteins
208 199 30 1 SCOP 47473 EF-hand
171 171 8 0 SCOP 47459 HLH, helix-loop-helix DNA-binding domain
168 115 11 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
168 134 27 0 SCOP 57667 beta-beta-alpha zinc fingers
167 160 44 4 SCOP 46785 "Winged helix" DNA-binding domain
166 139 29 5 SCOP 51905 FAD/NAD(P)-binding domain
163 161 8 3 SCOP 51126 Pectin lyase-like
163 113 33 1 SCOP 49562 C2 domain (Calcium/lipid-binding domain, CaLB)
160 133 17 2 SCOP 55961 Bet v1-like
157 111 17 1 SCOP 101936 DNA-binding pseudobarrel domain
153 153 35 8 SCOP 56784 HAD-like
150 118 38 4 SCOP 54236 Ubiquitin-like
135 133 12 4 SCOP 53448 Nucleotide-diphospho-sugar transferases
133 115 50 1 SCOP 57903 FYVE/PHD zinc finger
132 73 21 4 SCOP 53067 Actin-like ATPase domain
132 130 10 5 SCOP 53383 PLP-dependent transferases
131 129 7 2 SCOP 47113 Histone-fold
125 123 30 1 SCOP 48403 Ankyrin repeat
123 123 4 1 SCOP 48113 Heme-dependent peroxidases
112 111 5 1 SCOP 47699 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
110 110 27 1 SCOP 46565 Chaperone J-domain
108 106 9 1 SCOP 81606 PP2C-like
107 105 10 1 SCOP 50630 Acid proteases
105 105 4 0 SCOP 55455 SRF-like
102 59 10 1 SCOP 47954 Cyclin-like
101 64 12 0 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
101 93 21 0 SCOP 51110 alpha-D-mannose-specific plant lectins
101 50 26 0 SCOP 90229 CCCH zinc finger
101 101 4 1 SCOP 101941 NAC domain
98 50 27 1 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
97 95 11 1 SCOP 52743 Subtilisin-like
94 94 4 1 SCOP 52266 SGNH hydrolase
93 93 16 3 SCOP 49899 Concanavalin A-like lectins/glucanases
92 78 7 1 SCOP 118290 WRKY DNA-binding domain
91 89 23 0 SCOP 54695 POZ domain
90 90 12 1 SCOP 47616 GST C-terminal domain-like
87 64 20 3 SCOP 49785 Galactose-binding domain-like
86 86 14 4 SCOP 56672 DNA/RNA polymerases
86 82 8 6 SCOP 51182 RmlC-like cupins
86 86 5 1 SCOP 101148 Plant invertase/pectin methylesterase inhibitor
85 75 19 0 SCOP 81901 HCP-like
84 49 6 2 SCOP 53901 Thiolase-like
84 73 24 0 SCOP 57756 Retrovirus zinc finger-like domains
80 61 16 0 SCOP 55008 HMA, heavy metal-associated domain
80 50 18 1 SCOP 90123 ABC transporter transmembrane region
72 59 8 1 SCOP 50129 GroES-like
70 67 11 2 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
70 44 22 1 SCOP 55021 ACT-like
69 68 14 0 SCOP 54277 CAD & PB1 domains
68 67 8 2 SCOP 54495 UBC-like
67 67 4 0 SCOP 57959 Leucine zipper domain
66 66 10 3 SCOP 48576 Terpenoid synthases
65 65 6 1 SCOP 103506 Mitochondrial carrier
65 65 28 3 SCOP 50729 PH domain-like
62 62 9 4 SCOP 56300 Metallo-dependent phosphatases
62 62 16 3 SCOP 52402 Adenine nucleotide alpha hydrolases-like
62 62 8 1 SCOP 56801 Acetyl-CoA synthetase-like
62 51 10 3 SCOP 48239 Terpenoid cyclases/Protein prenyltransferases
61 57 31 8 SCOP 54211 Ribosomal protein S5 domain 2-like
59 59 7 3 SCOP 49764 HSP20-like chaperones
59 57 23 3 SCOP 81296 E set domains
59 59 20 2 SCOP 82199 SET domain
57 55 11 2 SCOP 52172 CheY-like
57 53 15 1 SCOP 117281 Kelch motif
57 57 20 1 SCOP 81665 Calcium ATPase, transmembrane domain M
56 55 4 2 SCOP 50685 Barwin-like endoglucanases
55 51 9 4 SCOP 52096 ClpP/crotonase
54 42 15 0 SCOP 54631 CBS-domain pair
52 49 9 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
52 52 9 2 SCOP 56176 FAD-binding/transporter-associated domain-like
51 42 14 0 SCOP 69065 RNase III domain-like
50 44 26 0 SCOP 46934 UBA-like
48 41 12 0 SCOP 81324 Voltage-gated potassium channels
48 48 5 1 SCOP 74788 Cullin repeat-like
47 33 9 6 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
47 47 4 1 SCOP 103511 Chlorophyll a-b binding protein
47 27 15 0 SCOP 57889 Cysteine-rich domain
46 46 5 1 SCOP 81338 Aquaporin-like
45 44 20 3 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
44 23 10 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
43 43 11 4 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
43 20 7 2 SCOP 55753 Actin depolymerizing proteins
43 43 6 2 SCOP 48208 Six-hairpin glycosidases
43 41 16 2 SCOP 50447 Translation proteins
43 41 11 2 SCOP 56219 DNase I-like
43 23 6 1 SCOP 47923 Ypt/Rab-GAP domain of gyp1p
43 39 13 1 SCOP 49599 TRAF domain-like
42 42 12 1 SCOP 81653 Calcium ATPase, transduction domain A
41 41 7 3 SCOP 64356 SNARE-like
41 39 15 3 SCOP 52799 (Phosphotyrosine protein) phosphatases II
41 41 11 3 SCOP 74650 Galactose mutarotase-like
41 41 6 1 SCOP 81558 Photosystem I subunits PsaA/PsaB
40 40 6 1 SCOP 50182 Sm-like ribonucleoproteins
40 40 9 1 SCOP 54427 NTF2-like
40 39 11 1 SCOP 51206 cAMP-binding domain-like
40 30 17 0 SCOP 54768 dsRNA-binding domain-like
40 40 2 1 SCOP 49590 PHL pollen allergen
39 27 11 1 SCOP 54534 FKBP-like
39 37 17 0 SCOP 52200 Toll/Interleukin receptor TIR domain
39 25 17 0 SCOP 52113 BRCT domain
38 21 10 1 SCOP 56024 Phospholipase D/nuclease
38 38 8 1 SCOP 48464 ENTH/VHS domain
37 26 6 0 SCOP 82153 FAS1 domain
37 30 9 3 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
36 36 10 1 SCOP 52087 CRAL/TRIO domain
35 35 8 5 SCOP 51569 Aldolase
35 35 9 1 SCOP 50104 Translation proteins SH3-like domain
35 35 23 2 SCOP 55681 Class II aaRS and biotin synthetases
35 25 6 3 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
35 35 10 1 SCOP 50891 Cyclophilin-like
35 34 5 1 SCOP 49870 Osmotin, thaumatin-like protein
34 31 20 3 SCOP 52374 Nucleotidylyl transferase
34 31 10 0 SCOP 58038 SNARE fusion complex
34 34 8 0 SCOP 52025 PA domain
33 32 3 1 SCOP 51430 NAD(P)-linked oxidoreductase
33 33 2 0 SCOP 117856 AF0104/ALDC/Ptd012-like
33 33 16 3 SCOP 88697 PUA domain-like
33 33 9 4 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
32 32 4 0 SCOP 57829 Zn-binding ribosomal proteins
32 32 6 1 SCOP 55811 Nudix
32 32 11 4 SCOP 53187 Zn-dependent exopeptidases
32 32 10 1 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
32 19 15 0 SCOP 90209 Ran binding protein zinc finger-like
31 27 15 2 SCOP 52317 Class I glutamine amidotransferase-like
31 28 12 0 SCOP 50985 RCC1/BLIP-II
31 31 18 1 SCOP 53300 vWA-like
31 17 9 1 SCOP 55785 PYP-like sensor domain (PAS domain)
31 16 6 0 SCOP 75471 YhbY-like
31 23 14 0 SCOP 54160 Chromo domain-like
31 16 8 0 SCOP 47762 PAH2 domain
30 30 21 4 SCOP 56059 Glutathione synthetase ATP-binding domain-like
30 30 7 1 SCOP 51395 FMN-linked oxidoreductases
30 29 5 1 SCOP 48484 Lipoxigenase
30 30 15 3 SCOP 81301 Nucleotidyltransferase
30 29 6 2 SCOP 54518 Tubby C-terminal domain-like
30 30 7 0 SCOP 50965 Galactose oxidase, central domain
30 26 14 0 SCOP 63748 Tudor/PWWP/MBT
30 30 6 1 SCOP 101447 Formin homology 2 domain (FH2 domain)
29 28 13 0 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
29 29 7 0 SCOP 46938 CRAL/TRIO N-terminal domain
29 22 9 0 SCOP 57016 Plant lectins/antimicrobial peptides
28 27 6 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
28 28 10 4 SCOP 54373 FAD-linked reductases, C-terminal domain
27 23 8 2 SCOP 51695 PLC-like phosphodiesterases
27 27 1 0 SCOP 57095 Scorpion toxin-like
26 26 7 2 SCOP 53137 Translational machinery components
26 26 8 1 SCOP 54292 2Fe-2S ferredoxin-like
26 10 7 1 SCOP 63411 LuxS/MPP-like metallohydrolase
26 26 3 1 SCOP 141562 At5g01610-like
25 22 9 2 SCOP 56281 Metallo-hydrolase/oxidoreductase
25 25 11 1 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
25 20 11 0 SCOP 50156 PDZ domain-like
24 24 4 2 SCOP 53720 ALDH-like
24 23 6 2 SCOP 48150 DNA-glycosylase
24 22 9 1 SCOP 47095 HMG-box
24 24 4 1 SCOP 47661 t-snare proteins
24 24 8 2 SCOP 52029 GroEL apical domain-like
24 23 10 3 SCOP 63380 Riboflavin synthase domain-like
24 24 5 1 SCOP 49723 Lipase/lipooxygenase domain (PLAT/LH2 domain)
24 24 9 0 SCOP 47370 Bromodomain
23 23 9 1 SCOP 53850 Periplasmic binding protein-like II
23 23 5 2 SCOP 48557 L-aspartase-like
23 21 8 3 SCOP 52821 Rhodanese/Cell cycle control phosphatase
23 23 6 2 SCOP 55315 L30e-like
23 23 7 1 SCOP 52490 Tubulin nucleotide-binding domain-like
23 16 10 0 SCOP 82185 Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
23 13 7 1 SCOP 100897 Plant proteinase inhibitors
22 19 8 2 SCOP 53271 PRTase-like
22 18 8 3 SCOP 51161 Trimeric LpxA-like enzymes
22 22 6 6 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
22 21 7 1 SCOP 53254 Phosphoglycerate mutase-like
22 22 12 2 SCOP 56104 SAICAR synthase-like
22 22 8 1 SCOP 56399 ADP-ribosylation
22 22 6 2 SCOP 52151 FabD/lysophospholipase-like
22 22 4 1 SCOP 56762 HydB/Nqo4-like
22 20 6 1 SCOP 53955 Lysozyme-like
22 22 3 0 SCOP 54654 CI-2 family of serine protease inhibitors
22 22 9 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
22 20 7 1 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
22 22 5 0 SCOP 89009 GAT-like domain
21 21 5 3 SCOP 53613 Ribokinase-like
21 14 3 0 SCOP 81333 F1F0 ATP synthase subunit C
21 18 6 2 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
21 18 5 2 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
21 18 10 1 SCOP 50494 Trypsin-like serine proteases
21 11 6 1 SCOP 54980 EF-G C-terminal domain-like
21 21 11 0 SCOP 47384 Homodimeric domain of signal transducing histidine kinase
21 21 5 1 SCOP 55307 Tubulin C-terminal domain-like
21 19 5 0 SCOP 54849 GroEL-intermediate domain like
20 20 5 1 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
20 20 5 1 SCOP 55856 Cytochrome b5-like heme/steroid binding domain
20 20 9 1 SCOP 49879 SMAD/FHA domain
20 19 7 0 SCOP 49452 Starch-binding domain-like
20 20 9 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
20 20 10 1 SCOP 51011 Glycosyl hydrolase domain
20 20 6 1 SCOP 101690 PAZ domain
19 18 6 2 SCOP 55120 Pseudouridine synthase
19 19 6 1 SCOP 55174 Alpha-L RNA-binding motif
19 17 9 0 SCOP 57997 Tropomyosin
19 19 6 0 SCOP 144091 Rhomboid-like
19 19 2 1 SCOP 55797 PR-1-like
19 19 6 1 SCOP 48592 GroEL equatorial domain-like
19 19 4 1 SCOP 49363 Purple acid phosphatase, N-terminal domain
18 18 4 2 SCOP 47240 Ferritin-like
18 18 5 3 SCOP 100950 NagB/RpiA/CoA transferase-like
18 18 2 1 SCOP 56655 Carbohydrate phosphatase
18 18 9 2 SCOP 109604 HD-domain/PDEase-like
18 18 2 1 SCOP 81483 Bacterial photosystem II reaction centre, L and M subunits
18 17 7 1 SCOP 75005 Arabinanase/levansucrase/invertase
18 18 4 3 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
18 18 4 1 SCOP 140990 FtsH protease domain-like
18 18 7 0 SCOP 57863 ArfGap/RecO-like zinc finger
18 18 4 0 SCOP 49354 PapD-like
18 18 7 1 SCOP 56204 Hect, E3 ligase catalytic domain
18 14 11 0 SCOP 51045 WW domain
17 17 6 0 SCOP 111331 NAD kinase/diacylglycerol kinase-like
17 14 6 1 SCOP 53590 Nucleoside hydrolase
17 12 5 1 SCOP 55781 GAF domain-like
17 16 7 1 SCOP 51230 Single hybrid motif
17 16 4 1 SCOP 117070 LEA14-like
17 14 10 1 SCOP 47592 SWIB/MDM2 domain
17 17 3 1 SCOP 52279 Beta-D-glucan exohydrolase, C-terminal domain
17 17 3 0 SCOP 117892 Band 7/SPFH domain
17 17 3 1 SCOP 81382 Skp1 dimerisation domain-like
17 17 4 1 SCOP 103612 SBT domain
16 16 8 4 SCOP 51556 Metallo-dependent hydrolases
16 16 4 1 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
16 16 3 0 SCOP 63829 Calcium-dependent phosphotriesterase
16 16 9 1 SCOP 47576 Calponin-homology domain, CH-domain
16 16 11 1 SCOP 52954 Class II aaRS ABD-related
16 16 8 0 SCOP 81923 Double Clp-N motif
16 16 7 1 SCOP 81631 PAP/OAS1 substrate-binding domain
16 13 5 1 SCOP 118310 AN1-like Zinc finger
16 16 2 0 SCOP 50386 STI-like
16 8 2 1 SCOP 54416 Amine oxidase N-terminal region
15 15 3 1 SCOP 75304 Amidase signature (AS) enzymes
15 15 8 2 SCOP 54686 Ribosomal protein L16p/L10e
15 15 9 1 SCOP 55920 Creatinase/aminopeptidase
15 15 6 2 SCOP 52218 Flavoproteins
15 15 8 4 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
15 15 5 1 SCOP 161077 Photosystem II antenna protein-like
15 15 2 0 SCOP 52091 SpoIIaa-like
15 5 4 1 SCOP 53738 Phosphoglucomutase, first 3 domains
15 15 9 1 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
15 15 4 1 SCOP 75632 Cullin homology domain
15 3 3 0 SCOP 81698 FF domain
14 12 8 2 SCOP 53633 Carbamate kinase-like
14 12 4 2 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
14 14 2 1 SCOP 49777 PEBP-like
14 7 1 0 SCOP 88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors
14 14 7 1 SCOP 52777 CoA-dependent acyltransferases
14 14 4 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
14 10 5 2 SCOP 47203 Acyl-CoA dehydrogenase C-terminal domain-like
14 10 5 0 SCOP 50405 Actin-crosslinking proteins
14 13 6 0 SCOP 54106 LysM domain
14 14 2 1 SCOP 55031 Bacterial exopeptidase dimerisation domain
14 14 3 0 SCOP 57845 B-box zinc-binding domain
14 14 10 0 SCOP 46774 ARID-like
13 13 3 1 SCOP 53784 Phosphofructokinase
13 13 5 2 SCOP 102114 Radical SAM enzymes
13 13 4 1 SCOP 143113 NAP-like
13 13 6 0 SCOP 161111 Cation efflux protein transmembrane domain-like
13 13 2 0 SCOP 53822 Periplasmic binding protein-like I
13 12 7 1 SCOP 82171 DPP6 N-terminal domain-like
13 9 3 1 SCOP 54403 Cystatin/monellin
13 13 5 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
13 5 2 1 SCOP 55973 S-adenosylmethionine synthetase
13 11 11 0 SCOP 68906 SAP domain
13 13 8 0 SCOP 144232 HIT/MYND zinc finger-like
13 13 2 1 SCOP 48445 14-3-3 protein
12 12 4 1 SCOP 47973 Ribosomal protein S7
12 12 8 0 SCOP 103657 BAR/IMD domain-like
12 12 5 0 SCOP 47336 ACP-like
12 12 7 2 SCOP 75217 alpha/beta knot
12 12 7 1 SCOP 54862 4Fe-4S ferredoxins
12 12 1 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
12 12 4 2 SCOP 52768 Arginase/deacetylase
12 12 6 2 SCOP 55931 Glutamine synthetase/guanido kinase
12 12 4 1 SCOP 102405 MCP/YpsA-like
12 12 2 1 SCOP 55724 Mog1p/PsbP-like
12 11 8 0 SCOP 57783 Zinc beta-ribbon
12 12 5 4 SCOP 52467 DHS-like NAD/FAD-binding domain
12 12 3 1 SCOP 55103 FAD-linked oxidases, C-terminal domain
12 12 7 0 SCOP 81995 beta-sandwich domain of Sec23/24
12 8 4 1 SCOP 51101 Mannose-binding lectins
12 7 4 1 SCOP 56053 Ribosomal protein L6
12 12 1 1 SCOP 47874 Annexin
12 12 3 0 SCOP 47769 SAM/Pointed domain
12 12 5 1 SCOP 49447 Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
12 11 3 0 SCOP 140383 BSD domain-like
11 11 4 5 SCOP 51366 Ribulose-phoshate binding barrel
11 10 2 1 SCOP 56815 Sec1/munc18-like (SM) proteins
11 11 6 1 SCOP 88723 PIN domain-like
11 10 4 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
11 8 5 1 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
11 11 7 1 SCOP 50022 ISP domain
11 11 3 0 SCOP 50800 PK beta-barrel domain-like
11 9 4 0 SCOP 55136 Probable bacterial effector-binding domain
11 3 2 0 SCOP 50199 Staphylococcal nuclease
11 11 5 1 SCOP 48019 post-AAA+ oligomerization domain-like
11 11 2 2 SCOP 52922 TK C-terminal domain-like
11 10 9 2 SCOP 52440 PreATP-grasp domain
11 11 5 1 SCOP 55060 GHMP Kinase, C-terminal domain
11 11 1 1 SCOP 56327 LDH C-terminal domain-like
11 9 4 0 SCOP 57933 TAZ domain
10 9 6 2 SCOP 53927 Cytidine deaminase-like
10 10 3 0 SCOP 54570 Ribosomal protein S19
10 10 7 1 SCOP 50475 FMN-binding split barrel
10 10 4 0 SCOP 64268 PX domain
10 10 4 1 SCOP 81340 Clc chloride channel
10 10 5 2 SCOP 56645 Acyl-CoA dehydrogenase NM domain-like
10 10 2 1 SCOP 56003 Molybdenum cofactor-binding domain
10 10 7 0 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
10 10 4 0 SCOP 144083 Magnesium transport protein CorA, transmembrane region
10 9 4 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
10 7 6 1 SCOP 158702 Sec63 N-terminal domain-like
10 10 6 1 SCOP 81271 TGS-like
10 10 3 0 SCOP 47676 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
10 10 4 1 SCOP 51649 RuBisCo, C-terminal domain
10 8 3 1 SCOP 47862 Saposin
9 9 5 2 SCOP 54197 HIT-like
9 9 2 1 SCOP 55282 RL5-like
9 9 3 1 SCOP 52313 Ribosomal protein S2
9 9 2 1 SCOP 64005 Undecaprenyl diphosphate synthase
9 8 4 1 SCOP 55205 EPT/RTPC-like
9 9 2 1 SCOP 54648 DLC
9 9 3 0 SCOP 161219 CHY zinc finger-like
9 9 5 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
9 8 5 2 SCOP 50814 Lipocalins
9 9 3 1 SCOP 82704 AlbA-like
9 9 2 1 SCOP 55895 Ribonuclease Rh-like
9 9 7 2 SCOP 51246 Rudiment single hybrid motif
9 9 7 1 SCOP 54821 Ribosomal protein S3 C-terminal domain
9 9 1 0 SCOP 52935 PK C-terminal domain-like
9 9 2 0 SCOP 52129 Caspase-like
9 7 2 1 SCOP 48056 Di-copper centre-containing domain
9 9 9 1 SCOP 48334 DNA repair protein MutS, domain III
9 9 4 0 SCOP 48350 GTPase activation domain, GAP
9 7 3 0 SCOP 109905 Surp module (SWAP domain)
9 9 4 1 SCOP 82754 C-terminal, gelsolin-like domain of Sec23/24
9 9 5 0 SCOP 63491 BAG domain
9 8 5 0 SCOP 55666 Ribonuclease PH domain 2-like
9 9 3 0 SCOP 161245 Zinc hairpin stack
9 9 1 1 SCOP 116768 DNA-binding domain of EIN3-like
9 9 4 1 SCOP 81811 Helical domain of Sec23/24
9 9 4 0 SCOP 82919 Zn-finger domain of Sec23/24
8 8 1 1 SCOP 74731 Ribosomal protein L20
8 8 1 1 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
8 8 2 0 SCOP 47060 S15/NS1 RNA-binding domain
8 8 2 2 SCOP 51316 Mss4-like
8 8 5 2 SCOP 51419 PLP-binding barrel
8 8 4 1 SCOP 52949 Macro domain-like
8 8 2 1 SCOP 47226 Histidine-containing phosphotransfer domain, HPT domain
8 8 3 1 SCOP 56634 Heme-dependent catalase-like
8 8 3 0 SCOP 46579 Prefoldin
8 8 3 0 SCOP 53649 Alkaline phosphatase-like
8 8 5 1 SCOP 56317 Carbon-nitrogen hydrolase
8 8 2 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
8 8 1 1 SCOP 51069 Carbonic anhydrase
8 8 3 0 SCOP 143243 Nqo5-like
8 8 2 1 SCOP 111352 Ammonium transporter
8 8 2 0 SCOP 54736 ClpS-like
8 8 1 1 SCOP 56574 Serpins
8 8 3 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
8 8 6 0 SCOP 81464 Cytochrome c oxidase subunit II-like, transmembrane region
8 8 3 0 SCOP 81891 Poly A polymerase C-terminal region-like
8 8 2 1 SCOP 49998 Amine oxidase catalytic domain
8 8 3 1 SCOP 47741 CO dehydrogenase ISP C-domain like
8 8 3 0 SCOP 110942 HSP90 C-terminal domain
8 8 5 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
8 8 8 0 SCOP 159042 Plus3-like
8 8 4 0 SCOP 55277 GYF domain
8 8 4 1 SCOP 54585 Cdc48 domain 2-like
7 7 3 1 SCOP 56808 Ribosomal protein L1
7 7 5 0 SCOP 54843 Ribosomal protein L22
7 7 1 1 SCOP 50193 Ribosomal protein L14
7 7 3 1 SCOP 52080 Ribosomal proteins L15p and L18e
7 7 5 0 SCOP 110324 Ribosomal L27 protein-like
7 7 2 1 SCOP 50324 Inorganic pyrophosphatase
7 7 3 0 SCOP 46561 Ribosomal protein L29 (L29p)
7 7 1 0 SCOP 144122 Tim10-like
7 7 4 1 SCOP 48613 Heme oxygenase-like
7 7 4 0 SCOP 54897 Protease propeptides/inhibitors
7 7 2 0 SCOP 51306 LexA/Signal peptidase
7 7 2 0 SCOP 47072 Cysteine alpha-hairpin motif
7 7 2 1 SCOP 55159 eIF1-like
7 5 4 1 SCOP 53800 Chelatase
7 7 3 1 SCOP 81648 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
7 7 1 0 SCOP 88946 Sigma2 domain of RNA polymerase sigma factors
7 7 3 1 SCOP 50692 ADC-like
7 7 2 0 SCOP 110857 Gamma-glutamyl cyclotransferase-like
7 7 3 1 SCOP 48173 Cryptochrome/photolyase FAD-binding domain
7 7 3 1 SCOP 52425 Cryptochrome/photolyase, N-terminal domain
7 7 3 1 SCOP 51604 Enolase C-terminal domain-like
7 6 5 0 SCOP 47781 RuvA domain 2-like
7 7 2 1 SCOP 54626 Chalcone isomerase
7 7 5 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
7 7 3 1 SCOP 89124 Nop domain
7 7 4 0 SCOP 101898 NHL repeat
7 4 3 1 SCOP 56014 Nitrite and sulphite reductase 4Fe-4S domain-like
7 7 3 1 SCOP 54826 Enolase N-terminal domain-like
7 7 2 1 SCOP 54665 CO dehydrogenase molybdoprotein N-domain-like
7 7 2 1 SCOP 55447 CO dehydrogenase flavoprotein C-terminal domain-like
7 7 5 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
7 7 4 0 SCOP 101576 Supernatant protein factor (SPF), C-terminal domain
7 7 3 1 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
7 7 5 1 SCOP 48425 Sec7 domain
7 6 4 0 SCOP 144074 E2F-DP heterodimerization region
7 7 3 0 SCOP 54368 Glutamine synthetase, N-terminal domain
7 7 4 0 SCOP 140111 Endosomal sorting complex assembly domain
7 7 4 0 SCOP 109715 DEK C-terminal domain
6 6 2 1 SCOP 53167 Purine and uridine phosphorylases
6 6 4 1 SCOP 52166 Ribosomal protein L4
6 6 3 0 SCOP 46946 S13-like H2TH domain
6 6 2 1 SCOP 75620 Release factor
6 6 5 1 SCOP 82649 SufE/NifU
6 6 2 1 SCOP 52161 Ribosomal protein L13
6 6 3 0 SCOP 55129 Ribosomal protein L30p/L7e
6 4 4 2 SCOP 51726 UROD/MetE-like
6 6 3 2 SCOP 46626 Cytochrome c
6 6 3 0 SCOP 144000 Oxysterol-binding protein-like
6 6 4 1 SCOP 47819 HRDC-like
6 6 2 0 SCOP 47694 Cytochrome c oxidase subunit h
6 6 3 0 SCOP 55257 RBP11-like subunits of RNA polymerase
6 6 5 0 SCOP 58113 Apolipoprotein A-I
6 6 1 1 SCOP 55770 Profilin (actin-binding protein)
6 6 1 1 SCOP 81442 Cytochrome c oxidase subunit I-like
6 6 3 1 SCOP 81342 Transmembrane di-heme cytochromes
6 6 2 0 SCOP 102712 JAB1/MPN domain
6 4 2 1 SCOP 54909 Dimeric alpha+beta barrel
6 6 2 0 SCOP 47413 lambda repressor-like DNA-binding domains
6 6 4 0 SCOP 55154 CYTH-like phosphatases
6 6 3 1 SCOP 50993 Peptidase/esterase 'gauge' domain
6 6 5 0 SCOP 69322 Tricorn protease domain 2
6 6 1 1 SCOP 56925 OMPA-like
6 6 4 0 SCOP 160443 SMR domain-like
6 6 5 1 SCOP 51971 Nucleotide-binding domain
6 6 3 0 SCOP 47090 PGBD-like
6 6 5 2 SCOP 53623 MurD-like peptide ligases, catalytic domain
6 4 4 1 SCOP 56042 PurM C-terminal domain-like
6 4 4 1 SCOP 55326 PurM N-terminal domain-like
6 3 2 1 SCOP 55124 Nitrite/Sulfite reductase N-terminal domain-like
6 6 5 1 SCOP 49348 Clathrin adaptor appendage domain
6 6 4 0 SCOP 82708 R3H domain
6 6 3 0 SCOP 57196 EGF/Laminin
6 6 4 0 SCOP 47895 Transducin (alpha subunit), insertion domain
6 6 4 0 SCOP 158639 ENT-like
6 6 2 0 SCOP 111388 Pollen allergen ole e 6
6 6 1 0 SCOP 54529 Mitochondrial glycoprotein MAM33-like
6 6 2 0 SCOP 57277 Granulin repeat
6 5 2 1 SCOP 109920 Hypothetical protein At3g22680
6 6 5 0 SCOP 75553 Smc hinge domain
6 6 2 1 SCOP 81822 RuBisCo LSMT C-terminal, substrate-binding domain
6 6 2 0 SCOP 55003 PAP/Archaeal CCA-adding enzyme, C-terminal domain
5 5 3 2 SCOP 53697 SIS domain
5 5 2 0 SCOP 160369 Ribosomal protein L10-like
5 5 3 1 SCOP 55068 Peptide methionine sulfoxide reductase
5 5 2 2 SCOP 55821 YrdC/RibB
5 5 2 0 SCOP 89360 HesB-like domain
5 5 1 1 SCOP 56770 HydA/Nqo6-like
5 5 1 1 SCOP 56276 S-adenosylmethionine decarboxylase
5 5 3 0 SCOP 101908 Putative isomerase YbhE
5 5 4 0 SCOP 82657 BolA-like
5 5 2 1 SCOP 48256 Citrate synthase
5 5 2 1 SCOP 57798 Casein kinase II beta subunit
5 3 3 1 SCOP 69645 Arp2/3 complex subunits
5 5 2 0 SCOP 50044 SH3-domain
5 5 1 2 SCOP 55909 Pentein
5 3 3 2 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
5 5 3 1 SCOP 52016 LeuD/IlvD-like
5 5 3 1 SCOP 64167 SurE-like
5 4 3 1 SCOP 51338 Composite domain of metallo-dependent hydrolases
5 5 3 0 SCOP 57802 Rubredoxin-like
5 5 4 1 SCOP 55186 ThrRS/AlaRS common domain
5 5 3 1 SCOP 46548 alpha-helical ferredoxin
5 5 1 0 SCOP 55287 RPB5-like RNA polymerase subunit
5 5 1 0 SCOP 160374 RplX-like
5 5 5 0 SCOP 53092 Creatinase/prolidase N-terminal domain
5 5 4 0 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
5 5 3 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
5 5 4 1 SCOP 142921 WGR domain-like
5 5 3 1 SCOP 50621 Alanine racemase C-terminal domain-like
5 5 3 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
5 5 3 1 SCOP 48225 Seven-hairpin glycosidases
5 5 4 0 SCOP 52075 Outer arm dynein light chain 1
5 5 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
5 5 2 0 SCOP 75689 Zinc-binding domain of translation initiation factor 2 beta
5 5 2 0 SCOP 100966 Translation initiation factor 2 beta, aIF2beta, N-terminal domain
5 5 5 0 SCOP 55271 DNA repair protein MutS, domain I
5 5 1 1 SCOP 118359 Expressed protein At2g23090/F21P24.15
5 5 3 0 SCOP 63570 PABC (PABP) domain
5 2 2 0 SCOP 49303 beta-Galactosidase/glucuronidase domain
5 5 2 0 SCOP 110004 Glycolipid transfer protein, GLTP
5 5 2 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
5 5 3 1 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
5 5 3 1 SCOP 82215 C-terminal autoproteolytic domain of nucleoporin nup98
5 5 1 0 SCOP 53036 Eukaryotic RPB5 N-terminal domain
5 5 4 0 SCOP 143503 PUG domain-like
5 5 3 0 SCOP 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
5 5 2 0 SCOP 160219 AMPKBI-like
5 5 3 1 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
5 5 4 1 SCOP 47587 Domain of poly(ADP-ribose) polymerase
4 4 2 1 SCOP 54999 Ribosomal protein S10
4 4 2 1 SCOP 56047 Ribosomal protein S8
4 4 2 1 SCOP 103491 Preprotein translocase SecY subunit
4 4 3 0 SCOP 64182 DHH phosphoesterases
4 2 2 0 SCOP 56214 4'-phosphopantetheinyl transferase
4 4 4 0 SCOP 143800 L28p-like
4 4 4 1 SCOP 52980 Restriction endonuclease-like
4 4 3 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
4 4 2 1 SCOP 51351 Triosephosphate isomerase (TIM)
4 4 2 1 SCOP 51730 FAD-linked oxidoreductase
4 4 3 1 SCOP 50715 Ribosomal protein L25-like
4 3 2 1 SCOP 55298 YjgF-like
4 4 3 0 SCOP 54995 Ribosomal protein S6
4 4 3 1 SCOP 53328 Formyltransferase
4 4 3 1 SCOP 56322 ADC synthase
4 4 1 0 SCOP 52499 Isochorismatase-like hydrolases
4 4 4 0 SCOP 47027 Acyl-CoA binding protein
4 4 3 1 SCOP 55144 LigT-like
4 4 2 1 SCOP 56019 The spindle assembly checkpoint protein mad2
4 4 3 1 SCOP 49329 Cu,Zn superoxide dismutase-like
4 4 1 1 SCOP 111126 Ligand-binding domain in the NO signalling and Golgi transport
4 4 2 1 SCOP 53056 beta-carbonic anhydrase, cab
4 4 1 1 SCOP 55418 eIF4e-like
4 4 2 1 SCOP 101960 Stabilizer of iron transporter SufD
4 4 1 1 SCOP 46458 Globin-like
4 4 1 1 SCOP 55239 RuBisCO, small subunit
4 4 3 0 SCOP 141571 Pentapeptide repeat-like
4 4 3 1 SCOP 54447 ssDNA-binding transcriptional regulator domain
4 4 3 2 SCOP 54913 GlnB-like
4 4 3 1 SCOP 101112 Oxygen-evolving enhancer protein 3,
4 3 2 1 SCOP 53218 Molybdenum cofactor biosynthesis proteins
4 4 2 1 SCOP 53732 Aconitase iron-sulfur domain
4 4 3 0 SCOP 50952 Soluble quinoprotein glucose dehydrogenase
4 4 4 1 SCOP 103025 Folate-binding domain
4 4 1 1 SCOP 101386 all-alpha NTP pyrophosphatases
4 4 3 0 SCOP 56726 DNA topoisomerase IV, alpha subunit
4 3 3 1 SCOP 55979 DNA clamp
4 4 3 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
4 4 3 0 SCOP 63825 YWTD domain
4 4 2 0 SCOP 81336 F1F0 ATP synthase subunit A
4 4 4 0 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
4 4 1 0 SCOP 158745 LanC-like
4 4 2 1 SCOP 52210 Succinyl-CoA synthetase domains
4 4 2 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
4 4 3 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
4 4 4 1 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
4 4 3 1 SCOP 55957 Phosphoglucomutase, C-terminal domain
4 4 3 1 SCOP 81837 BEACH domain
4 4 2 1 SCOP 56542 Substrate-binding domain of HMG-CoA reductase
4 4 2 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
4 4 4 0 SCOP 158573 GINS helical bundle-like
4 4 4 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
4 4 1 1 SCOP 55481 N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
4 4 2 1 SCOP 88798 N-terminal, heterodimerisation domain of RBP7 (RpoE)
4 4 2 0 SCOP 48340 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
4 4 2 0 SCOP 47050 VHP, Villin headpiece domain
4 2 2 1 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
4 4 2 1 SCOP 54966 RuBisCO, large subunit, small (N-terminal) domain
4 4 2 0 SCOP 54556 Chitinase insertion domain
4 4 3 0 SCOP 46942 Elongation factor TFIIS domain 2
4 4 2 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
4 4 4 0 SCOP 55711 Subdomain of clathrin and coatomer appendage domain
4 4 1 1 SCOP 63887 P-domain of calnexin/calreticulin
4 4 2 1 SCOP 55035 NAD-binding domain of HMG-CoA reductase
4 4 3 0 SCOP 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain
4 4 4 0 SCOP 53150 DNA repair protein MutS, domain II
4 4 2 0 SCOP 101238 XPC-binding domain
3 3 3 1 SCOP 53790 Tetrapyrrole methylase
3 3 2 1 SCOP 53178 Peptidyl-tRNA hydrolase-like
3 3 2 0 SCOP 46911 Ribosomal protein S18
3 3 3 0 SCOP 57840 Ribosomal protein L36
3 3 2 1 SCOP 64263 Prokaryotic ribosomal protein L17
3 3 3 2 SCOP 53597 Dihydrofolate reductase-like
3 3 2 0 SCOP 141091 L21p-like
3 3 3 1 SCOP 53748 Phosphoglycerate kinase
3 3 1 1 SCOP 51283 dUTPase-like
3 3 2 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
3 3 1 1 SCOP 142695 RibA-like
3 3 1 1 SCOP 81452 Cytochrome c oxidase subunit III-like
3 3 2 0 SCOP 48140 Ribosomal protein L19 (L19e)
3 3 1 2 SCOP 90096 Subunits of heterodimeric actin filament capping protein Capz
3 3 1 0 SCOP 51645 Malate synthase G
3 3 3 1 SCOP 48439 Protein prenylyltransferase
3 3 1 2 SCOP 52972 ITPase-like
3 3 3 0 SCOP 110849 ParB/Sulfiredoxin
3 3 2 1 SCOP 88713 Glycoside hydrolase/deacetylase
3 3 3 1 SCOP 56529 FAH
3 3 1 0 SCOP 50090 Electron transport accessory proteins
3 3 2 0 SCOP 81544 Subunit IX of photosystem I reaction centre, PsaJ
3 2 2 1 SCOP 161045 Cytochrome b559 subunits
3 3 1 0 SCOP 161055 PsbZ-like
3 3 2 1 SCOP 101546 ASF1-like
3 3 3 0 SCOP 56601 beta-lactamase/transpeptidase-like
3 3 1 1 SCOP 51998 PFL-like glycyl radical enzymes
3 3 1 0 SCOP 55331 Tautomerase/MIF
3 3 3 0 SCOP 82771 GIY-YIG endonuclease
3 3 2 0 SCOP 158615 RbcX-like
3 3 2 0 SCOP 103256 Hypothetical protein TM0160
3 3 1 0 SCOP 143456 VC0467-like
3 3 2 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
3 3 1 0 SCOP 102588 LmbE-like
3 3 3 1 SCOP 100939 SPOC domain-like
3 3 2 1 SCOP 102198 Putative cyclase
3 3 2 1 SCOP 111321 AF1104-like
3 3 2 1 SCOP 54984 eEF-1beta-like
3 3 1 1 SCOP 102462 Peptidyl-tRNA hydrolase II
3 3 1 0 SCOP 46589 tRNA-binding arm
3 3 2 1 SCOP 102645 CoaB-like
3 3 1 1 SCOP 48537 Phospholipase C/P1 nuclease
3 3 2 0 SCOP 58104 Methyl-accepting chemotaxis protein (MCP) signaling domain
3 3 3 1 SCOP 56719 Type II DNA topoisomerase
3 3 3 0 SCOP 118116 DNA mismatch repair protein MutL
3 3 3 0 SCOP 55658 L9 N-domain-like
3 3 3 0 SCOP 160059 PriA/YqbF domain
3 3 1 1 SCOP 52418 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
3 3 3 0 SCOP 141673 MOSC N-terminal domain-like
3 3 1 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
3 3 2 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
3 3 2 0 SCOP 143548 Serine metabolism enzymes domain
3 3 2 0 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
3 3 3 0 SCOP 90002 Hypothetical protein YjiA, C-terminal domain
3 3 1 0 SCOP 47648 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
3 2 2 1 SCOP 55945 TATA-box binding protein-like
3 3 2 0 SCOP 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
3 3 2 0 SCOP 55545 beta-N-acetylhexosaminidase-like domain
3 3 2 0 SCOP 102735 Trigger factor ribosome-binding domain
3 3 2 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
3 3 1 0 SCOP 55904 Ornithine decarboxylase C-terminal domain
3 3 2 1 SCOP 47446 Signal peptide-binding domain
3 3 1 1 SCOP 101152 Mob1/phocein
3 3 2 0 SCOP 47938 Functional domain of the splicing factor Prp18
3 3 1 0 SCOP 116846 MIT domain
3 3 2 0 SCOP 161065 ATP synthase D chain-like
3 3 2 0 SCOP 103107 Hypothetical protein c14orf129, hspc210
3 3 2 1 SCOP 88688 Families 57/38 glycoside transferase middle domain
3 3 2 0 SCOP 143791 DUSP-like
3 3 1 0 SCOP 57027 Plant inhibitors of proteinases and amylases
3 3 3 1 SCOP 117018 ATP-dependent DNA ligase DNA-binding domain
3 3 2 0 SCOP 69742 Glutamyl tRNA-reductase catalytic, N-terminal domain
3 3 1 0 SCOP 103243 KA1-like
3 3 2 0 SCOP 102848 NSFL1 (p97 ATPase) cofactor p47, SEP domain
3 3 1 0 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
3 3 1 0 SCOP 160527 V-type ATPase subunit E-like
3 3 1 1 SCOP 50989 Clathrin heavy-chain terminal domain
3 3 2 0 SCOP 50916 Rap30/74 interaction domains
3 3 2 0 SCOP 64586 C-terminal domain of ProRS
3 3 1 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
3 3 2 1 SCOP 49441 Cytochrome f, large domain
3 3 1 0 SCOP 81496 Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
3 3 2 0 SCOP 158230 PRP4-like
2 2 2 0 SCOP 56731 DNA primase core
2 2 2 0 SCOP 48013 NusB-like
2 2 1 1 SCOP 56420 Peptide deformylase
2 2 1 0 SCOP 82607 YbaB-like
2 2 1 0 SCOP 143034 L35p-like
2 2 1 1 SCOP 51658 Xylose isomerase-like
2 2 1 1 SCOP 55194 Ribosome recycling factor, RRF
2 2 1 1 SCOP 103263 Chorismate synthase, AroC
2 2 1 1 SCOP 51713 tRNA-guanine transglycosylase
2 2 1 1 SCOP 54285 MoaD/ThiS
2 2 1 1 SCOP 52121 Lumazine synthase
2 2 2 0 SCOP 144217 CSL zinc finger
2 2 1 0 SCOP 52042 Ribosomal protein L32e
2 1 1 0 SCOP 55469 FMN-dependent nitroreductase-like
2 2 1 0 SCOP 141678 MAL13P1.257-like
2 2 1 0 SCOP 54575 Ribosomal protein L31e
2 2 2 0 SCOP 140718 Mediator hinge subcomplex-like
2 2 1 0 SCOP 81411 Mitochondrial cytochrome c oxidase subunit VIa
2 2 1 0 SCOP 63393 RNA polymerase subunits
2 2 2 0 SCOP 55248 PCD-like
2 2 2 2 SCOP 54506 Diaminopimelate epimerase-like
2 2 1 0 SCOP 81508 Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
2 2 2 0 SCOP 48662 Ribosomal protein L39e
2 2 2 0 SCOP 53639 AraD/HMP-PK domain-like
2 2 1 0 SCOP 82282 Homocysteine S-methyltransferase
2 2 1 1 SCOP 69060 Arp2/3 complex 21 kDa subunit ARPC3
2 2 2 1 SCOP 64153 YjeF N-terminal domain-like
2 2 1 0 SCOP 69618 HemD-like
2 2 1 0 SCOP 48690 Epsilon subunit of mitochondrial F1F0-ATP synthase
2 2 1 1 SCOP 81536 Subunit III of photosystem I reaction centre, PsaF
2 2 1 0 SCOP 81540 Subunit VIII of photosystem I reaction centre, PsaI
2 2 1 1 SCOP 81568 Photosystem I reaction center subunit XI, PsaL
2 1 1 0 SCOP 49478 Cna protein B-type domain
2 2 1 1 SCOP 53795 PEP carboxykinase-like
2 2 2 0 SCOP 103642 Sec-C motif
2 1 1 0 SCOP 46955 Putative DNA-binding domain
2 2 2 1 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
2 2 2 0 SCOP 82697 PurS-like
2 2 2 1 SCOP 56524 Oxidoreductase molybdopterin-binding domain
2 2 1 0 SCOP 89550 PHP domain-like
2 2 1 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
2 2 2 0 SCOP 55200 Translation initiation factor IF3, C-terminal domain
2 2 2 0 SCOP 158997 Trm112p-like
2 2 1 1 SCOP 53213 LigB-like
2 2 2 1 SCOP 51391 Thiamin phosphate synthase
2 2 2 0 SCOP 51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
2 2 2 1 SCOP 48600 Chorismate mutase II
2 2 1 1 SCOP 110916 Peptidyl-tRNA hydrolase domain-like
2 2 2 1 SCOP 55826 YbaK/ProRS associated domain
2 2 2 1 SCOP 110069 ApaG-like
2 2 2 0 SCOP 56821 Prismane protein-like
2 2 1 0 SCOP 53182 Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
2 2 2 0 SCOP 142338 CofD-like
2 2 2 0 SCOP 50486 FMT C-terminal domain-like
2 2 2 0 SCOP 75011 3-carboxy-cis,cis-mucoante lactonizing enzyme
2 2 2 0 SCOP 69786 YggU-like
2 2 2 0 SCOP 48695 Multiheme cytochromes
2 2 2 1 SCOP 89562 RraA-like
2 2 2 1 SCOP 74784 Translin
2 2 1 1 SCOP 142535 AF0625-like
2 2 1 0 SCOP 143437 THUMP domain-like
2 2 1 0 SCOP 116820 Rps17e-like
2 1 1 0 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
2 2 1 0 SCOP 143865 CorA soluble domain-like
2 1 1 0 SCOP 69279 Phage tail proteins
2 2 1 0 SCOP 82093 Heme chaperone CcmE
2 2 1 0 SCOP 69318 Integrin alpha N-terminal domain
2 2 1 0 SCOP 50370 Ricin B-like lectins
2 1 1 0 SCOP 89372 Fucose-specific lectin
2 2 1 0 SCOP 48619 Phospholipase A2, PLA2
2 2 1 1 SCOP 82114 Riboflavin kinase-like
2 2 2 0 SCOP 69304 Tricorn protease N-terminal domain
2 2 2 0 SCOP 49344 CBD9-like
2 2 2 0 SCOP 47789 C-terminal domain of RNA polymerase alpha subunit
2 2 2 0 SCOP 49464 Carboxypeptidase regulatory domain-like
2 2 1 0 SCOP 49265 Fibronectin type III
2 2 1 1 SCOP 68923 PEP carboxykinase N-terminal domain
2 1 1 0 SCOP 53681 Aspartate/glutamate racemase
2 1 1 0 SCOP 49373 Invasin/intimin cell-adhesion fragments
2 2 1 0 SCOP 68912 Rho N-terminal domain-like
2 2 2 0 SCOP 63418 MurE/MurF N-terminal domain
2 2 2 0 SCOP 117289 Nucleoporin domain
2 2 1 0 SCOP 110921 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
2 2 1 0 SCOP 51984 MurCD N-terminal domain
2 2 2 0 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
2 2 1 0 SCOP 69075 Glutamyl tRNA-reductase dimerization domain
2 2 1 0 SCOP 101278 N-terminal domain of adenylylcyclase associated protein, CAP
2 2 1 0 SCOP 47794 Rad51 N-terminal domain-like
2 2 1 0 SCOP 82861 Mechanosensitive channel protein MscS (YggB), transmembrane region
2 2 1 0 SCOP 55116 Formiminotransferase domain of formiminotransferase-cyclodeaminase.
2 2 2 0 SCOP 55550 SH2 domain
2 2 2 0 SCOP 54752 RecA protein, C-terminal domain
2 2 1 1 SCOP 143975 IlvD/EDD N-terminal domain-like
2 2 2 0 SCOP 74924 Cap-Gly domain
2 2 1 0 SCOP 57184 Growth factor receptor domain
2 2 2 1 SCOP 69000 FAD-dependent thiol oxidase
2 2 2 0 SCOP 47396 Transcription factor IIA (TFIIA), alpha-helical domain
2 1 1 0 SCOP 55394 Bactericidal permeability-increasing protein, BPI
2 2 2 1 SCOP 109993 VPS9 domain
2 2 1 1 SCOP 69012 alpha-ketoacid dehydrogenase kinase, N-terminal domain
2 2 2 0 SCOP 47672 Transferrin receptor-like dimerisation domain
2 2 2 0 SCOP 81531 Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
2 2 2 0 SCOP 57414 Hairpin loop containing domain-like
2 2 2 0 SCOP 50911 Mannose 6-phosphate receptor domain
2 2 2 1 SCOP 101233 PWI domain
2 2 2 1 SCOP 110993 eIF-2-alpha, C-terminal domain
2 2 2 0 SCOP 47040 Kix domain of CBP (creb binding protein)
2 2 1 1 SCOP 89942 eEF1-gamma domain
2 2 2 0 SCOP 50784 Transcription factor IIA (TFIIA), beta-barrel domain
2 2 2 0 SCOP 140427 VPS28 C-terminal domain-like
2 2 1 0 SCOP 159065 Dom34/Pelota N-terminal domain-like
2 2 1 1 SCOP 69340 C-terminal domain of adenylylcyclase associated protein
2 2 1 0 SCOP 140996 Hermes dimerisation domain
2 2 2 0 SCOP 140612 EB1 dimerisation domain-like
2 2 2 0 SCOP 101420 C-terminal domain of Ku80
2 2 1 0 SCOP 103431 Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor
2 2 2 0 SCOP 101790 Aminomethyltransferase beta-barrel domain
2 2 2 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
2 2 2 1 SCOP 63433 Fumarylacetoacetate hydrolase, FAH, N-terminal domain
2 2 1 0 SCOP 101821 Aminopeptidase/glucanase lid domain
2 2 2 0 SCOP 54364 Translation initiation factor IF3, N-terminal domain
2 2 2 0 SCOP 81799 Putative methyltransferase TM0872, insert domain
2 2 1 0 SCOP 101224 HAND domain of the nucleosome remodeling ATPase ISWI
2 2 2 0 SCOP 46915 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
2 2 2 0 SCOP 109736 FGAM synthase PurL, linker domain
1 1 1 1 SCOP 52141 Uracil-DNA glycosylase-like
1 1 1 0 SCOP 142433 CinA-like
1 1 1 0 SCOP 89919 Ribosome-binding factor A, RbfA
1 1 1 0 SCOP 89447 AbrB/MazE/MraZ-like
1 1 1 0 SCOP 55831 Thymidylate synthase/dCMP hydroxymethylase
1 1 1 1 SCOP 82549 DAK1/DegV-like
1 1 1 1 SCOP 75625 YebC-like
1 1 1 0 SCOP 46992 Ribosomal protein S20
1 1 1 0 SCOP 109998 Triger factor/SurA peptide-binding domain-like
1 1 1 0 SCOP 89623 Ribose/Galactose isomerase RpiB/AlsB
1 1 1 0 SCOP 54565 Ribosomal protein S16
1 1 1 1 SCOP 69765 IpsF-like
1 1 1 0 SCOP 56935 Porins
1 1 1 1 SCOP 56796 Dehydroquinate synthase-like
1 1 1 1 SCOP 55387 Frataxin/Nqo15-like
1 1 1 0 SCOP 81321 Family A G protein-coupled receptor-like
1 1 1 0 SCOP 110296 Oligoxyloglucan reducing end-specific cellobiohydrolase
1 1 1 0 SCOP 54762 Signal recognition particle alu RNA binding heterodimer, SRP9/14
1 1 1 1 SCOP 69500 DTD-like
1 1 1 1 SCOP 102886 Coproporphyrinogen III oxidase
1 1 1 0 SCOP 142897 TFB5-like
1 1 1 0 SCOP 81524 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 111278 SSo0622-like
1 1 1 0 SCOP 159468 AtpF-like
1 1 1 0 SCOP 81514 Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 89895 FYSH domain
1 1 1 0 SCOP 69103 Arp2/3 complex 16 kDa subunit ARPC5
1 1 1 0 SCOP 118203 Vacuolar ATP synthase subunit C
1 1 1 0 SCOP 103486 V-type ATP synthase subunit C
1 1 1 0 SCOP 143870 PF0523-like
1 1 1 0 SCOP 53032 tRNA-intron endonuclease catalytic domain-like
1 1 1 0 SCOP 103111 Activator of Hsp90 ATPase, Aha1
1 1 1 1 SCOP 46924 RNA polymerase subunit RPB10
1 1 1 0 SCOP 46988 Tubulin chaperone cofactor A
1 1 1 0 SCOP 143447 AMMECR1-like
1 1 1 1 SCOP 52788 Phosphotyrosine protein phosphatases I
1 1 1 1 SCOP 63562 RPB6/omega subunit-like
1 1 1 0 SCOP 141734 HisI-like
1 1 1 1 SCOP 57662 Ferredoxin thioredoxin reductase (FTR), catalytic beta chain
1 1 1 0 SCOP 103446 PetG subunit of the cytochrome b6f complex
1 1 1 1 SCOP 64234 Photosystem I subunit PsaD
1 1 1 0 SCOP 81563 Photosystem I reaction center subunit X, PsaK
1 1 1 1 SCOP 161025 Photosystem II 10 kDa phosphoprotein PsbH
1 1 1 0 SCOP 161041 Photosystem II reaction center protein I, PsbI
1 1 1 0 SCOP 161021 Photosystem II reaction center protein J, PsbJ
1 1 1 0 SCOP 161084 MAPEG domain-like
1 1 1 0 SCOP 111038 YjbQ-like
1 1 1 1 SCOP 55040 Molybdenum cofactor biosynthesis protein C, MoaC
1 1 1 1 SCOP 51717 Dihydropteroate synthetase-like
1 1 1 0 SCOP 55718 SCP-like
1 1 1 1 SCOP 118196 YaeB-like
1 1 1 0 SCOP 103436 PetL subunit of the cytochrome b6f complex
1 1 1 0 SCOP 142754 NadA-like
1 1 1 1 SCOP 56266 DmpA/ArgJ-like
1 1 1 0 SCOP 58100 Bacterial hemolysins
1 1 1 0 SCOP 53807 "Helical backbone" metal receptor
1 1 1 1 SCOP 56349 DNA breaking-rejoining enzymes
1 1 1 0 SCOP 55083 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
1 1 1 0 SCOP 161033 Photosystem II reaction center protein M, PsbM
1 1 1 0 SCOP 101744 Rof/RNase P subunit-like
1 1 1 0 SCOP 103441 PetM subunit of the cytochrome b6f complex
1 1 1 1 SCOP 143990 YbiA-like
1 1 1 0 SCOP 54690 Molybdopterin synthase subunit MoaE
1 1 1 0 SCOP 141000 Glu-tRNAGln amidotransferase C subunit
1 1 1 0 SCOP 159501 EreA/ChaN-like
1 1 1 0 SCOP 140663 TTHA0068-like
1 1 1 1 SCOP 54111 Urease, gamma-subunit
1 1 1 1 SCOP 51278 Urease, beta-subunit
1 1 1 0 SCOP 141694 AF2212/PG0164-like
1 1 1 0 SCOP 89095 GatB/YqeY motif
1 1 1 0 SCOP 109910 YgfY-like
1 1 1 0 SCOP 49472 Transthyretin (synonym: prealbumin)
1 1 1 1 SCOP 158694 UraD-Like
1 1 1 1 SCOP 160909 ATP12-like
1 1 1 0 SCOP 56747 Prim-pol domain
1 1 1 1 SCOP 52335 Methylglyoxal synthase-like
1 1 1 1 SCOP 110581 Indigoidine synthase A-like
1 1 1 0 SCOP 111384 OmpH-like
1 1 1 1 SCOP 101473 DhaL-like
1 1 1 1 SCOP 51219 TRAP-like
1 1 1 0 SCOP 159659 Cgl1923-like
1 1 1 0 SCOP 141130 Acetamidase/Formamidase-like
1 1 1 1 SCOP 160950 YacF-like
1 1 1 0 SCOP 64076 MTH938-like
1 1 1 0 SCOP 142764 YgbK-like
1 1 1 0 SCOP 69754 Ribosome binding protein Y (YfiA homologue)
1 1 1 0 SCOP 50939 Sialidases
1 1 1 0 SCOP 103515 Autotransporter
1 1 1 0 SCOP 74653 TolA/TonB C-terminal domain
1 1 1 0 SCOP 160104 Acetoacetate decarboxylase-like
1 1 1 0 SCOP 158710 PSPTO4464-like
1 1 1 0 SCOP 109709 KorB DNA-binding domain-like
1 1 1 0 SCOP 69349 Phage fibre proteins
1 1 1 0 SCOP 160631 SMI1/KNR4-like
1 1 1 0 SCOP 46950 Double-stranded DNA-binding domain
1 1 1 0 SCOP 50346 PRC-barrel domain
1 1 1 0 SCOP 160350 Rnp2-like
1 1 1 0 SCOP 69695 SRP19
1 1 1 0 SCOP 63867 MoeA C-terminal domain-like
1 1 1 0 SCOP 48008 GntR ligand-binding domain-like
1 1 1 1 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
1 1 1 0 SCOP 158832 Tex N-terminal region-like
1 1 1 1 SCOP 69336 Alpha subunit of glutamate synthase, C-terminal domain
1 1 1 0 SCOP 53706 Formate dehydrogenase/DMSO reductase, domains 1-3
1 1 1 0 SCOP 55608 Homing endonucleases
1 1 1 0 SCOP 141255 YccV-like
1 1 1 0 SCOP 102110 (2r)-phospho-3-sulfolactate synthase ComA
1 1 1 0 SCOP 49313 Cadherin-like
1 1 1 0 SCOP 55234 Cyanase C-terminal domain
1 1 1 1 SCOP 142877 EndoU-like
1 1 1 1 SCOP 52009 Phosphohistidine domain
1 1 1 0 SCOP 49384 Carbohydrate-binding domain
1 1 1 0 SCOP 90257 Myosin rod fragments
1 1 1 0 SCOP 144206 NOB1 zinc finger-like
1 1 1 0 SCOP 82679 N-utilization substance G protein NusG, N-terminal domain
1 1 1 0 SCOP 56436 C-type lectin-like
1 1 1 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
1 1 1 0 SCOP 69055 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
1 1 1 0 SCOP 81853 Family 10 polysaccharide lyase
1 1 1 0 SCOP 56037 PheT/TilS domain
1 1 1 0 SCOP 51215 Regulatory protein AraC
1 1 1 0 SCOP 75704 Mitotic arrest deficient-like 1, Mad1
1 1 1 0 SCOP 47162 Apolipoprotein
1 1 1 0 SCOP 63999 Thiamin pyrophosphokinase, catalytic domain
1 1 1 0 SCOP 58022 XRCC4, C-terminal oligomerization domain
1 1 1 0 SCOP 142984 Nqo1 middle domain-like
1 1 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
1 1 1 1 SCOP 110111 Ctag/Cox11
1 1 1 0 SCOP 81585 PsbU/PolX domain-like
1 1 1 1 SCOP 110019 ERO1-like
1 1 1 1 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
1 1 1 1 SCOP 53920 Fe-only hydrogenase
1 1 1 1 SCOP 54810 GMP synthetase C-terminal dimerisation domain
1 1 1 1 SCOP 140869 GUN4-like
1 1 1 0 SCOP 161270 PspA lactotransferrin-binding region
1 1 1 0 SCOP 46600 C-terminal UvrC-binding domain of UvrB
1 1 1 0 SCOP 47144 HSC20 (HSCB), C-terminal oligomerisation domain
1 1 1 0 SCOP 110836 Hypothetical protein SAV1430
1 1 1 1 SCOP 63882 MoeA N-terminal region -like
1 1 1 0 SCOP 48431 Lipovitellin-phosvitin complex, superhelical domain
1 1 1 0 SCOP 141259 CarD-like
1 1 1 0 SCOP 47933 ERP29 C domain-like
1 1 1 0 SCOP 81624 N-terminal domain of MutM-like DNA repair proteins
1 1 1 0 SCOP 54782 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
1 1 1 0 SCOP 140490 Nqo1C-terminal domain-like
1 1 1 1 SCOP 141493 Allene oxide cyclase-like
1 1 1 0 SCOP 54991 Anticodon-binding domain of PheRS
1 1 1 0 SCOP 110221 AbfB domain
1 1 1 0 SCOP 116742 eIF2alpha middle domain-like
1 1 1 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
1 1 1 1 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
1 1 1 0 SCOP 54452 MHC antigen-recognition domain
1 1 1 0 SCOP 69203 Nucleoplasmin-like core domain
1 1 1 1 SCOP 89817 Mago nashi protein
1 1 1 1 SCOP 82109 MIR domain
1 1 1 1 SCOP 140984 PTPA-like
1 1 1 0 SCOP 117839 WWE domain
1 1 1 0 SCOP 48097 Regulator of G-protein signaling, RGS
1 1 1 0 SCOP 50084 Myosin S1 fragment, N-terminal domain
1 1 1 1 SCOP 140102 ISY1 domain-like
1 1 1 0 SCOP 140106 Calcyclin-binding protein-like
1 1 1 0 SCOP 143875 ERH-like
1 1 1 1 SCOP 142019 Nqo1 FMN-binding domain-like
1 1 1 0 SCOP 55261 GAD domain-like
1 1 1 0 SCOP 50809 XRCC4, N-terminal domain
1 1 1 1 SCOP 64158 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
1 1 1 0 SCOP 144292 occludin/ELL-like
1 1 1 0 SCOP 81886 Helical scaffold and wing domains of SecA
1 1 1 0 SCOP 57424 LDL receptor-like module
1 1 1 0 SCOP 81872 BRCA2 helical domain
1 1 1 0 SCOP 101931 Pym (Within the bgcn gene intron protein, WIBG), N-terminal domain
1 1 1 0 SCOP 56194 Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
1 1 1 0 SCOP 47031 Second domain of FERM
1 1 1 1 SCOP 88802 Pre-PUA domain
1 1 1 1 SCOP 56741 Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
1 1 1 0 SCOP 63862 Thiamin pyrophosphokinase, substrate-binding domain
1 1 1 0 SCOP 49758 Calpain large subunit, middle domain (domain III)
1 1 1 1 SCOP 160897 Taf5 N-terminal domain-like
1 1 1 0 SCOP 140586 Dcp2 domain-like
1 1 1 0 SCOP 55653 Ribosomal protein L9 C-domain
1 1 1 0 SCOP 144256 TSP9-like
1 1 1 0 SCOP 143517 TRCF domain-like
1 1 1 0 SCOP 81502 ISP transmembrane anchor
1 1 1 1 SCOP 81767 Pre-protein crosslinking domain of SecA
1 1 1 0 SCOP 56519 Penicillin binding protein dimerisation domain
1 1 1 0 SCOP 47802 DNA polymerase beta, N-terminal domain-like
1 1 1 0 SCOP 102741 Obg GTP-binding protein C-terminal domain
1 1 1 0 SCOP 109728 Hypothetical protein AF0491, middle domain
1 1 1 0 SCOP 160996 HI0933 insert domain-like
1 1 1 0 SCOP 57770 Methionyl-tRNA synthetase (MetRS), Zn-domain
1 1 1 0 SCOP 81878 BRCA2 tower domain

Jump to [ Top of page · Assignment statistics ]


The following superfamilies have one or more weak hits:

SCOP superfamily Troponin coil-coiled subunits
SCOP superfamily Head morphogenesis protein gp7
SCOP superfamily Dimerization motif of sir4
SCOP superfamily Mollusk pheromone
SCOP superfamily Neurotransmitter-gated ion-channel transmembrane pore
SCOP superfamily MTH1187/YkoF-like
SCOP superfamily DNA-binding protein Tfx
SCOP superfamily Inhibitor of vertebrate lysozyme, Ivy
SCOP superfamily Doublecortin (DC)
SCOP superfamily Prokaryotic lipoproteins and lipoprotein localization factors
SCOP superfamily Collagen-binding domain
SCOP superfamily Receptor-binding domain of short tail fibre protein gp12
SCOP superfamily Tumor suppressor gene product Apc
SCOP superfamily Cysteine-rich DNA binding domain, (DM domain)
SCOP superfamily MesJ substrate recognition domain-like
SCOP superfamily OsmC-like
SCOP superfamily Mechanosensitive channel protein MscS (YggB), C-terminal domain
SCOP superfamily SEA domain
SCOP superfamily Probable GTPase Der, C-terminal domain
SCOP superfamily Polo-box domain
SCOP superfamily GckA/TtuD-like
SCOP superfamily Swiveling domain of dehydratase reactivase alpha subunit
SCOP superfamily Tp47 lipoprotein, N-terminal domain
SCOP superfamily BAH domain
SCOP superfamily Viral chemokine binding protein m3
SCOP superfamily Tp47 lipoprotein, middle and C-terminal domains
SCOP superfamily Crustacean CHH/MIH/GIH neurohormone
SCOP superfamily F1F0 ATP synthase subunit B, membrane domain
SCOP superfamily Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
SCOP superfamily Mitochondrial cytochrome c oxidase subunit VIIa
SCOP superfamily Mitochondrial cytochrome c oxidase subunit IV
SCOP superfamily ABC transporter involved in vitamin B12 uptake, BtuC
SCOP superfamily Fumarate reductase respiratory complex transmembrane subunits
SCOP superfamily Gated mechanosensitive channel
SCOP superfamily C-terminal domain of mollusc hemocyanin
SCOP superfamily H-NS histone-like proteins
SCOP superfamily Rad50 coiled-coil Zn hook
SCOP superfamily YhbC-like, N-terminal domain
SCOP superfamily Hypothetical protein MTH1880
SCOP superfamily VSV matrix protein
SCOP superfamily V-region of surface antigen I/II (SA I/II, PAC)
SCOP superfamily Lamin A/C globular tail domain
SCOP superfamily Aconitase B, N-terminal domain
SCOP superfamily C-terminal domain of PLC-beta
SCOP superfamily Eea1 homodimerisation domain
SCOP superfamily Head and neck region of the ectodomain of NDV fusion glycoprotein
SCOP superfamily OMPT-like
SCOP superfamily Transcription factor NusA, N-terminal domain
SCOP superfamily Integrin beta tail domain
SCOP superfamily DNA-binding C-terminal domain of the transcription factor MotA
SCOP superfamily Type III secretory system chaperone-like
SCOP superfamily Cell wall binding repeat
SCOP superfamily Quinohemoprotein amine dehydrogenase A chain, domain 3
SCOP superfamily Integrin domains
SCOP superfamily Bcr-Abl oncoprotein oligomerization domain
SCOP superfamily Recombination endonuclease VII, C-terminal and dimerization domains
SCOP superfamily F1 ATPase inhibitor, IF1, C-terminal domain
SCOP superfamily Intermediate filament protein, coiled coil region
SCOP superfamily Phase 1 flagellin
SCOP superfamily DNA-binding domain of intron-encoded endonucleases
SCOP superfamily Hsp33 domain
SCOP superfamily YlxR-like
SCOP superfamily Precorrin-8X methylmutase CbiC/CobH
SCOP superfamily Ribonuclease domain of colicin E3
SCOP superfamily Sortase
SCOP superfamily SAND domain-like
SCOP superfamily Cytolysin/lectin
SCOP superfamily Ganglioside M2 (gm2) activator
SCOP superfamily Telomeric repeat binding factor (TRF) dimerisation domain
SCOP superfamily PTS-regulatory domain, PRD
SCOP superfamily Outer surface protein C (OspC)
SCOP superfamily Frizzled cysteine-rich domain
SCOP superfamily Colicin Ia, N-terminal domain
SCOP superfamily Clostridium neurotoxins, "coiled-coil" domain
SCOP superfamily Variant surface glycoprotein (N-terminal domain)
SCOP superfamily Influenza hemagglutinin (stalk)
SCOP superfamily Fibritin
SCOP superfamily Outer membrane lipoprotein
SCOP superfamily Multimerization domain of the phosphoprotein from sendai virus
SCOP superfamily Delta-sleep-inducing peptide immunoreactive peptide
SCOP superfamily Coiled-coil dimerization domain from cortexillin I
SCOP superfamily Fibrinogen coiled-coil and central regions
SCOP superfamily Chicken cartilage matrix protein
SCOP superfamily Triple coiled coil domain of C-type lectins
SCOP superfamily Inhibitor of apoptosis (IAP) repeat
SCOP superfamily Zn-binding domains of ADDBP
SCOP superfamily Zinc domain conserved in yeast copper-regulated transcription factors
SCOP superfamily Hypothetical protein MTH1184
SCOP superfamily Zn2/Cys6 DNA-binding domain
SCOP superfamily HIPIP (high potential iron protein)
SCOP superfamily Antifungal protein (AGAFP)
SCOP superfamily Serine protease inhibitors
SCOP superfamily Blood coagulation inhibitor (disintegrin)
SCOP superfamily Crisp domain-like
SCOP superfamily Cystine-knot cytokines
SCOP superfamily Kringle-like
SCOP superfamily Defensin-like
SCOP superfamily BPTI-like
SCOP superfamily Snake toxin-like
SCOP superfamily Leech antihemostatic proteins
SCOP superfamily Elafin-like
SCOP superfamily Bowman-Birk inhibitor, BBI
SCOP superfamily omega toxin-like
SCOP superfamily Agouti-related protein
SCOP superfamily Aerolisin/ETX pore-forming domain
SCOP superfamily Lipovitellin-phosvitin complex; beta-sheet shell regions
SCOP superfamily Outer membrane efflux proteins (OEP)
SCOP superfamily Bcl-2 inhibitors of programmed cell death
SCOP superfamily Colicin
SCOP superfamily Replication terminator protein (Tus)
SCOP superfamily Non-globular alpha+beta subunits of globular proteins
SCOP superfamily gp120 core
SCOP superfamily SRCR-like
SCOP superfamily Nitrile hydratase alpha chain
SCOP superfamily N-acetylmuramoyl-L-alanine amidase-like
SCOP superfamily 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
SCOP superfamily Phoshotransferase/anion transport protein
SCOP superfamily Cell cycle regulatory proteins
SCOP superfamily Origin of replication-binding domain, RBD-like
SCOP superfamily tRNA-intron endonuclease N-terminal domain-like
SCOP superfamily Nucleotide cyclase
SCOP superfamily Killer toxin KP6 alpha-subunit
SCOP superfamily SecB-like
SCOP superfamily GFP-like
SCOP superfamily Staphylokinase/streptokinase
SCOP superfamily Prion-like
SCOP superfamily RNase A-like
SCOP superfamily His-Me finger endonucleases
SCOP superfamily Microbial ribonucleases
SCOP superfamily Glutaminase/Asparaginase
SCOP superfamily Resolvase-like
SCOP superfamily RNA 3'-terminal phosphate cyclase, RPTC, insert domain
SCOP superfamily Methylesterase CheB, C-terminal domain
SCOP superfamily Cobalamin (vitamin B12)-dependent enzymes
SCOP superfamily Bacterial luciferase-like
SCOP superfamily An insect antifreeze protein
SCOP superfamily Insect cysteine-rich antifreeze protein
SCOP superfamily beta-Roll
SCOP superfamily Outer surface protein
SCOP superfamily Bacteriochlorophyll A protein
SCOP superfamily TolB, C-terminal domain
SCOP superfamily Tachylectin-2
SCOP superfamily Hemopexin-like domain
SCOP superfamily Oncogene products
SCOP superfamily Avidin/streptavidin
SCOP superfamily TIMP-like
SCOP superfamily DNA-binding domain of retroviral integrase
SCOP superfamily EV matrix protein
SCOP superfamily Spermadhesin, CUB domain
SCOP superfamily Virus attachment protein globular domain
SCOP superfamily PHM/PNGase F
SCOP superfamily gamma-Crystallin-like
SCOP superfamily Rab geranylgeranyltransferase alpha-subunit, insert domain
SCOP superfamily Periplasmic chaperone C-domain
SCOP superfamily alpha-Amylase inhibitor tendamistat
SCOP superfamily p53-like transcription factors
SCOP superfamily Bacterial adhesins
SCOP superfamily Actinoxanthin-like
SCOP superfamily Transglutaminase, two C-terminal domains
SCOP superfamily PKD domain
SCOP superfamily Immunoglobulin
SCOP superfamily Moesin tail domain
SCOP superfamily Tetraspanin
SCOP superfamily Serum albumin-like
SCOP superfamily Nuclear receptor ligand-binding domain
SCOP superfamily Tetracyclin repressor-like, C-terminal domain
SCOP superfamily Cytochrome c oxidase subunit E
SCOP superfamily Bacterial muramidases
SCOP superfamily Ras GEF
SCOP superfamily A virus capsid protein alpha-helical domain
SCOP superfamily Aldehyde ferredoxin oxidoreductase, C-terminal domains
SCOP superfamily TrpR-like
SCOP superfamily Influenza virus matrix protein M1
SCOP superfamily Transcription factor STAT-4 N-domain
SCOP superfamily LigA subunit of an aromatic-ring-opening dioxygenase LigAB
SCOP superfamily FliG
SCOP superfamily Bacteriocin AS-48
SCOP superfamily Apolipophorin-III
SCOP superfamily Hepatitis B viral capsid (hbcag)
SCOP superfamily Retroviral matrix proteins
SCOP superfamily lambda integrase-like, N-terminal domain
SCOP superfamily p53 tetramerization domain
SCOP superfamily STAT
SCOP superfamily Methionine synthase domain
SCOP superfamily Cloroperoxidase
SCOP superfamily Insect pheromone/odorant-binding proteins
SCOP superfamily Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
SCOP superfamily ROP protein
SCOP superfamily Retrovirus capsid dimerization domain-like
SCOP superfamily 4-helical cytokines
SCOP superfamily Bacterial GAP domain
SCOP superfamily alpha-catenin/vinculin-like
SCOP superfamily FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
SCOP superfamily TMV-like viral coat proteins
SCOP superfamily Hemerythrin-like
SCOP superfamily Aspartate receptor, ligand-binding domain
SCOP superfamily Mitochondrial import receptor subunit Tom20
SCOP superfamily Methane monooxygenase hydrolase, gamma subunit
SCOP superfamily T4 endonuclease V
SCOP superfamily TAF(II)230 TBP-binding fragment
SCOP superfamily RAP domain-like
SCOP superfamily Enzyme IIa from lactose specific PTS, IIa-lac
SCOP superfamily Spectrin repeat
SCOP superfamily DNA helicase RuvA subunit, C-terminal domain
SCOP superfamily C-terminal effector domain of the bipartite response regulators
SCOP superfamily Epsilon subunit of F1F0-ATP synthase C-terminal domain
SCOP superfamily HR1 repeat
SCOP superfamily RILP dimerisation region
SCOP superfamily T-antigen specific domain-like
SCOP superfamily E6 C-terminal domain-like
SCOP superfamily MetI-like
SCOP superfamily MgtE membrane domain-like
SCOP superfamily SNF-like
SCOP superfamily Viral glycoprotein ectodomain-like
SCOP superfamily flu NP-like
SCOP superfamily SSO1389-like
SCOP superfamily MalF N-terminal region-like
SCOP superfamily Api92-like
SCOP superfamily FlhC-like
SCOP superfamily BT0923-like
SCOP superfamily YueI-like
SCOP superfamily PA1123-like
SCOP superfamily NMB0513-like
SCOP superfamily BLRF2-like
SCOP superfamily PG1857-like
SCOP superfamily NosL/MerB-like
SCOP superfamily MTH889-like
SCOP superfamily Bacterial polysaccharide co-polymerase-like
SCOP superfamily Shew3726-like
SCOP superfamily FlaG-like
SCOP superfamily NMB0488-like
SCOP superfamily NRDP1 C-terminal domain-like
SCOP superfamily MM3350-like
SCOP superfamily PH1570-like
SCOP superfamily XkdW-like
SCOP superfamily YerB-like
SCOP superfamily TBP-interacting protein-like
SCOP superfamily AttH-like
SCOP superfamily NifT/FixU-like
SCOP superfamily HIN-2000 domain-like
SCOP superfamily BC4932-like
SCOP superfamily Mib/herc2 domain-like
SCOP superfamily PMT central region-like
SCOP superfamily MgtE N-terminal domain-like
SCOP superfamily TerB-like
SCOP superfamily RPA2825-like
SCOP superfamily YheA/YmcA-like
SCOP superfamily Jann4075-like
SCOP superfamily TAFH domain-like
SCOP superfamily FLJ32549 domain-like
SCOP superfamily BH2638-like
SCOP superfamily PG0775 C-terminal domain-like
SCOP superfamily YqcC-like
SCOP superfamily IVS-encoded protein-like
SCOP superfamily HP0062-like
SCOP superfamily TM1646-like
SCOP superfamily YqgQ-like
SCOP superfamily Sec2 N-terminal region
SCOP superfamily MPN010-like
SCOP superfamily Nop10-like SnoRNP
SCOP superfamily Vanabin-like
SCOP superfamily Heme iron utilization protein-like
SCOP superfamily FdhE-like
SCOP superfamily Peptidoglycan deacetylase N-terminal noncatalytic region
SCOP superfamily L,D-transpeptidase pre-catalytic domain-like
SCOP superfamily YojJ-like
SCOP superfamily TM1622-like
SCOP superfamily TTHA1013/TTHA0281-like
SCOP superfamily BB1717-like
SCOP superfamily YktB/PF0168-like
SCOP superfamily YjbR-like
SCOP superfamily EAL domain-like
SCOP superfamily FimD N-terminal domain-like
SCOP superfamily Extracellular hemoglobin linker subunit, receptor domain
SCOP superfamily BH3618-like
SCOP superfamily TM0957-like
SCOP superfamily Atu1913-like
SCOP superfamily Agglutinin HPA-like
SCOP superfamily RelB-like
SCOP superfamily Indolic compounds 2,3-dioxygenase-like
SCOP superfamily Duffy binding domain-like
SCOP superfamily Pseudo ankyrin repeat-like
SCOP superfamily USP8 N-terminal domain-like
SCOP superfamily Rhabdovirus nucleoprotein-like
SCOP superfamily SipA N-terminal domain-like
SCOP superfamily RUN domain-like
SCOP superfamily IpaD-like
SCOP superfamily Hyaluronidase post-catalytic domain-like
SCOP superfamily EF2947-like
SCOP superfamily MukF C-terminal domain-like
SCOP superfamily FlgN-like
SCOP superfamily HP1531-like
SCOP superfamily LemA-like
SCOP superfamily EsxAB dimer-like
SCOP superfamily MW0975(SA0943)-like
SCOP superfamily YppE-like
SCOP superfamily Coronavirus NSP7-like
SCOP superfamily MxiH-like
SCOP superfamily SPy1572-like
SCOP superfamily Synuclein
SCOP superfamily HSP33 redox switch-like
SCOP superfamily Connexin43
SCOP superfamily Proton glutamate symport protein
SCOP superfamily Viral ssDNA binding protein
SCOP superfamily YbeD/HP0495-like
SCOP superfamily CRISPR-associated protein
SCOP superfamily Flagellar hook protein flgE
SCOP superfamily DNA primase DnaG, C-terminal domain
SCOP superfamily Hypothetical protein MPN330
SCOP superfamily RNA-binding protein She2p
SCOP superfamily EspA/CesA-like
SCOP superfamily Hypothetical protein YqbG
SCOP superfamily Hook domain
SCOP superfamily XseB-like
SCOP superfamily DNA methylase specificity domain
SCOP superfamily TrkA C-terminal domain-like
SCOP superfamily Coronavirus S2 glycoprotein
SCOP superfamily YAP1 redox domain
SCOP superfamily Hormone receptor domain
SCOP superfamily VP4 membrane interaction domain
SCOP superfamily Urocanase
SCOP superfamily Recombination protein RecR
SCOP superfamily Hemolytic lectin CEL-III, C-terminal domain
SCOP superfamily Sulfolobus fructose-1,6-bisphosphatase-like
SCOP superfamily Hypothetical protein MTH677
SCOP superfamily Glycerate kinase I
SCOP superfamily Coronavirus RNA-binding domain
SCOP superfamily BTV NS2-like ssRNA-binding domain
SCOP superfamily Peptidylarginine deiminase Pad4, middle domain
SCOP superfamily I/LWEQ domain
SCOP superfamily NblA-like
SCOP superfamily DinB/YfiT-like putative metalloenzymes
SCOP superfamily CAPPD, an extracellular domain of amyloid beta A4 protein
SCOP superfamily Cag-Z
SCOP superfamily Phenylalanine zipper
SCOP superfamily PhoU-like
SCOP superfamily G protein-binding domain
SCOP superfamily TSP type-3 repeat
SCOP superfamily CCHHC domain
SCOP superfamily Hypothetical protein Ta0289 C-terminal domain
SCOP superfamily Plexin repeat
SCOP superfamily Bubble protein
SCOP superfamily Respiratory nitrate reductase 1 gamma chain
SCOP superfamily Oligosaccharyltransferase subunit ost4p
SCOP superfamily Antivirulence factor
SCOP superfamily Suppressor of Fused, N-terminal domain
SCOP superfamily TT1751-like
SCOP superfamily Roadblock/LC7 domain
SCOP superfamily Sensory domain-like
SCOP superfamily Nucleocapsid protein dimerization domain
SCOP superfamily Hypothetical protein TT1725
SCOP superfamily Hypothetical protein Ta1206
SCOP superfamily Cell division protein ZapA-like
SCOP superfamily NIF3 (NGG1p interacting factor 3)-like
SCOP superfamily AXH domain
SCOP superfamily Surface presentation of antigens (SPOA)
SCOP superfamily Hypothetical protein YgiW
SCOP superfamily SspB-like
SCOP superfamily Superantigen (mitogen) Ypm
SCOP superfamily Dextranase, N-terminal domain
SCOP superfamily Anti-sigma factor FlgM
SCOP superfamily Stathmin
SCOP superfamily Eukaryotic initiation factor 4f subunit eIF4g, eIF4e-binding domain
SCOP superfamily Hypothetical protein ST1625
SCOP superfamily P40 nucleoprotein
SCOP superfamily Hsp90 co-chaperone CDC37
SCOP superfamily Methenyltetrahydrofolate cyclohydrolase-like
SCOP superfamily KaiA/RbsU domain
SCOP superfamily Dimerisation domain of CENP-B
SCOP superfamily Nonstructural protein ns2, Nep, M1-binding domain
SCOP superfamily Typo IV secretion system protein TraC
SCOP superfamily Chemosensory protein Csp2
SCOP superfamily IP3 receptor type 1 binding core, domain 2
SCOP superfamily Kazal-type serine protease inhibitors

Jump to [ Top of page · Assignment statistics ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.