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  Home > Genomes > Superfamily assignments for Linum usitatissimum v200


Linum usitatissimum v200 superfamily assignments

Taxonomy
Taxonomy browser entry

Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum; Linum usitatissimum

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Fasta format sequences
Domain assignments

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Assignment statistics

Sequences: 43484 total
26434 (61 %) with assignment
399 average length
44 % amino acid coverage
Domains: 37684 total
955 unique superfamilies
797 unique families
289 average length
39.5 average superfamily size
97 % formed by duplication
Domain combinations: 1279 domain pairs
4378 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies
1972 1690 340 11 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
1853 1830 199 4 SCOP 56112 Protein kinase-like (PK-like)
1052 805 160 2 SCOP 52058 L domain-like
786 732 112 3 SCOP 57850 RING/U-box
724 607 127 10 SCOP 48371 ARM repeat
722 701 74 8 SCOP 51735 NAD(P)-binding Rossmann-fold domains
665 610 56 2 SCOP 46689 Homeodomain-like
645 506 83 2 SCOP 48452 TPR-like
614 435 75 1 SCOP 54928 RNA-binding domain, RBD
596 583 46 8 SCOP 53474 alpha/beta-Hydrolases
491 487 77 0 SCOP 81383 F-box domain
486 417 35 17 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
476 450 84 1 SCOP 50978 WD40 repeat-like
472 463 22 1 SCOP 48264 Cytochrome P450
431 422 68 8 SCOP 51445 (Trans)glycosidases
426 358 102 0 SCOP 52047 RNI-like
425 397 22 1 SCOP 103473 MFS general substrate transporter
414 360 51 4 SCOP 52833 Thioredoxin-like
398 393 15 4 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
362 192 24 2 SCOP 49503 Cupredoxins
325 302 45 1 SCOP 47473 EF-hand
295 260 17 1 SCOP 54171 DNA-binding domain
293 208 70 5 SCOP 50249 Nucleic acid-binding proteins
288 276 69 4 SCOP 46785 "Winged helix" DNA-binding domain
284 242 42 5 SCOP 51905 FAD/NAD(P)-binding domain
284 279 23 2 SCOP 51197 Clavaminate synthase-like
268 266 51 8 SCOP 56784 HAD-like
262 252 22 3 SCOP 51126 Pectin lyase-like
255 135 31 4 SCOP 53067 Actin-like ATPase domain
252 177 17 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
224 222 30 3 SCOP 49899 Concanavalin A-like lectins/glucanases
224 162 27 1 SCOP 101936 DNA-binding pseudobarrel domain
220 162 39 1 SCOP 49562 C2 domain (Calcium/lipid-binding domain, CaLB)
216 167 25 0 SCOP 57667 beta-beta-alpha zinc fingers
212 208 22 5 SCOP 53448 Nucleotide-diphospho-sugar transferases
208 207 40 1 SCOP 46565 Chaperone J-domain
204 177 30 2 SCOP 55961 Bet v1-like
201 201 14 0 SCOP 47459 HLH, helix-loop-helix DNA-binding domain
194 193 9 1 SCOP 101941 NAC domain
193 189 28 9 SCOP 54001 Cysteine proteinases
190 161 60 1 SCOP 57903 FYVE/PHD zinc finger
187 179 44 1 SCOP 48403 Ankyrin repeat
177 177 9 1 SCOP 47699 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
170 115 34 3 SCOP 49785 Galactose-binding domain-like
163 159 18 5 SCOP 53383 PLP-dependent transferases
162 150 56 4 SCOP 54236 Ubiquitin-like
162 160 15 1 SCOP 101148 Plant invertase/pectin methylesterase inhibitor
161 156 14 1 SCOP 50630 Acid proteases
159 158 46 0 SCOP 52200 Toll/Interleukin receptor TIR domain
157 155 26 4 SCOP 53098 Ribonuclease H-like
156 154 10 1 SCOP 48113 Heme-dependent peroxidases
153 80 32 0 SCOP 90229 CCCH zinc finger
147 89 20 0 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
144 82 10 2 SCOP 53901 Thiolase-like
143 139 8 7 SCOP 51182 RmlC-like cupins
143 137 20 1 SCOP 52743 Subtilisin-like
141 140 15 1 SCOP 81606 PP2C-like
140 108 12 1 SCOP 118290 WRKY DNA-binding domain
139 137 8 2 SCOP 50685 Barwin-like endoglucanases
139 122 27 0 SCOP 81901 HCP-like
137 79 14 1 SCOP 47954 Cyclin-like
135 81 21 1 SCOP 90123 ABC transporter transmembrane region
134 132 11 2 SCOP 47113 Histone-fold
132 62 30 1 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
130 121 48 8 SCOP 54211 Ribosomal protein S5 domain 2-like
126 122 30 1 SCOP 54695 POZ domain
125 115 20 0 SCOP 51110 alpha-D-mannose-specific plant lectins
124 123 5 1 SCOP 52266 SGNH hydrolase
121 121 3 0 SCOP 55455 SRF-like
119 118 14 4 SCOP 56300 Metallo-dependent phosphatases
118 115 12 1 SCOP 103506 Mitochondrial carrier
115 94 21 0 SCOP 55008 HMA, heavy metal-associated domain
115 115 14 0 SCOP 54277 CAD & PB1 domains
109 108 28 3 SCOP 52402 Adenine nucleotide alpha hydrolases-like
104 85 13 1 SCOP 50129 GroES-like
101 101 6 0 SCOP 57959 Leucine zipper domain
98 60 24 0 SCOP 55021 ACT-like
97 63 15 6 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
97 69 11 3 SCOP 48239 Terpenoid cyclases/Protein prenyltransferases
95 94 26 1 SCOP 81665 Calcium ATPase, transmembrane domain M
94 94 33 3 SCOP 50729 PH domain-like
93 92 10 3 SCOP 48576 Terpenoid synthases
93 92 16 1 SCOP 47616 GST C-terminal domain-like
92 88 31 3 SCOP 81296 E set domains
87 75 16 4 SCOP 52096 ClpP/crotonase
86 85 10 1 SCOP 56801 Acetyl-CoA synthetase-like
85 85 15 1 SCOP 54495 UBC-like
85 84 23 2 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
83 78 17 1 SCOP 52172 CheY-like
82 82 7 2 SCOP 48208 Six-hairpin glycosidases
80 73 21 0 SCOP 58038 SNARE fusion complex
80 66 21 0 SCOP 57756 Retrovirus zinc finger-like domains
80 78 22 1 SCOP 81653 Calcium ATPase, transduction domain A
79 79 20 2 SCOP 82199 SET domain
78 58 18 0 SCOP 54631 CBS-domain pair
78 70 19 0 SCOP 117281 Kelch motif
78 40 11 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
77 75 26 3 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
77 76 10 2 SCOP 56176 FAD-binding/transporter-associated domain-like
76 67 31 0 SCOP 46934 UBA-like
75 71 27 4 SCOP 52374 Nucleotidylyl transferase
75 75 14 1 SCOP 48464 ENTH/VHS domain
73 64 22 0 SCOP 81324 Voltage-gated potassium channels
72 69 31 2 SCOP 50447 Translation proteins
71 71 19 4 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
71 70 12 3 SCOP 49764 HSP20-like chaperones
70 70 14 1 SCOP 52087 CRAL/TRIO domain
69 69 9 1 SCOP 50182 Sm-like ribonucleoproteins
69 56 10 0 SCOP 82153 FAS1 domain
68 68 5 1 SCOP 81338 Aquaporin-like
68 68 22 4 SCOP 74650 Galactose mutarotase-like
67 54 17 0 SCOP 50985 RCC1/BLIP-II
67 66 18 2 SCOP 64356 SNARE-like
67 67 5 1 SCOP 103511 Chlorophyll a-b binding protein
66 54 15 1 SCOP 54534 FKBP-like
65 65 7 0 SCOP 49590 PHL pollen allergen
63 62 15 2 SCOP 56219 DNase I-like
63 63 8 1 SCOP 74788 Cullin repeat-like
62 43 10 3 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
62 21 9 1 SCOP 63411 LuxS/MPP-like metallohydrolase
62 62 13 4 SCOP 54373 FAD-linked reductases, C-terminal domain
62 61 14 1 SCOP 52025 PA domain
61 61 27 1 SCOP 53300 vWA-like
60 60 30 2 SCOP 55681 Class II aaRS and biotin synthetases
60 55 14 1 SCOP 51206 cAMP-binding domain-like
60 59 14 1 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
60 32 8 1 SCOP 47923 Ypt/Rab-GAP domain of gyp1p
59 59 15 1 SCOP 54427 NTF2-like
59 31 18 0 SCOP 90209 Ran binding protein zinc finger-like
57 45 15 0 SCOP 47095 HMG-box
57 52 25 3 SCOP 52799 (Phosphotyrosine protein) phosphatases II
57 55 30 0 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
57 57 25 2 SCOP 88697 PUA domain-like
56 56 10 1 SCOP 50891 Cyclophilin-like
56 55 20 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
55 51 25 4 SCOP 56059 Glutathione synthetase ATP-binding domain-like
55 44 11 2 SCOP 51695 PLC-like phosphodiesterases
55 28 9 0 SCOP 75471 YhbY-like
55 37 20 0 SCOP 52113 BRCT domain
54 27 10 1 SCOP 56024 Phospholipase D/nuclease
54 54 10 0 SCOP 46938 CRAL/TRIO N-terminal domain
54 50 17 1 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
53 51 12 2 SCOP 53720 ALDH-like
53 26 8 2 SCOP 55753 Actin depolymerizing proteins
53 52 20 3 SCOP 81301 Nucleotidyltransferase
52 31 15 1 SCOP 55785 PYP-like sensor domain (PAS domain)
52 52 17 1 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
52 36 20 0 SCOP 54768 dsRNA-binding domain-like
51 50 12 1 SCOP 50104 Translation proteins SH3-like domain
51 51 19 1 SCOP 101447 Formin homology 2 domain (FH2 domain)
50 50 6 1 SCOP 55811 Nudix
50 45 17 3 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
50 50 14 0 SCOP 50965 Galactose oxidase, central domain
50 43 17 1 SCOP 49599 TRAF domain-like
49 48 13 4 SCOP 53187 Zn-dependent exopeptidases
49 48 7 2 SCOP 54518 Tubby C-terminal domain-like
49 46 15 3 SCOP 63380 Riboflavin synthase domain-like
47 45 7 1 SCOP 51430 NAD(P)-linked oxidoreductase
46 45 13 2 SCOP 55315 L30e-like
46 46 17 0 SCOP 51011 Glycosyl hydrolase domain
46 45 11 4 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
46 46 13 0 SCOP 63748 Tudor/PWWP/MBT
46 46 2 1 SCOP 141562 At5g01610-like
45 38 15 2 SCOP 52317 Class I glutamine amidotransferase-like
45 43 9 1 SCOP 49870 Osmotin, thaumatin-like protein
45 45 10 2 SCOP 52029 GroEL apical domain-like
44 43 10 5 SCOP 51569 Aldolase
44 40 5 1 SCOP 53955 Lysozyme-like
43 43 7 3 SCOP 53613 Ribokinase-like
43 28 12 0 SCOP 82185 Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
43 41 7 1 SCOP 49363 Purple acid phosphatase, N-terminal domain
43 43 11 0 SCOP 47370 Bromodomain
42 37 11 0 SCOP 57997 Tropomyosin
42 41 12 1 SCOP 48592 GroEL equatorial domain-like
42 42 8 1 SCOP 47661 t-snare proteins
41 33 13 2 SCOP 53271 PRTase-like
41 41 9 7 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
41 39 8 2 SCOP 53254 Phosphoglycerate mutase-like
40 38 8 3 SCOP 52821 Rhodanese/Cell cycle control phosphatase
40 37 10 2 SCOP 56281 Metallo-hydrolase/oxidoreductase
40 38 6 1 SCOP 51395 FMN-linked oxidoreductases
40 39 10 0 SCOP 54849 GroEL-intermediate domain like
40 40 10 0 SCOP 89009 GAT-like domain
39 39 7 1 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
39 38 10 4 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
39 39 12 1 SCOP 53850 Periplasmic binding protein-like II
39 21 14 1 SCOP 54980 EF-G C-terminal domain-like
38 38 8 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
38 34 10 0 SCOP 54106 LysM domain
38 14 8 1 SCOP 53738 Phosphoglucomutase, first 3 domains
38 29 11 1 SCOP 50382 Agglutinin
37 33 9 1 SCOP 52777 CoA-dependent acyltransferases
36 34 10 3 SCOP 55120 Pseudouridine synthase
36 35 15 2 SCOP 56104 SAICAR synthase-like
36 36 3 0 SCOP 117856 AF0104/ALDC/Ptd012-like
36 25 13 0 SCOP 50156 PDZ domain-like
36 36 7 2 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
36 27 13 0 SCOP 51045 WW domain
35 35 9 2 SCOP 53137 Translational machinery components
35 31 8 3 SCOP 51161 Trimeric LpxA-like enzymes
35 34 6 1 SCOP 117070 LEA14-like
34 34 7 1 SCOP 54292 2Fe-2S ferredoxin-like
34 34 6 1 SCOP 140990 FtsH protease domain-like
34 24 10 0 SCOP 54160 Chromo domain-like
33 32 12 3 SCOP 56672 DNA/RNA polymerases
33 33 7 1 SCOP 55856 Cytochrome b5-like heme/steroid binding domain
33 33 10 0 SCOP 144091 Rhomboid-like
33 28 6 2 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
33 30 12 1 SCOP 51230 Single hybrid motif
33 33 10 1 SCOP 50022 ISP domain
33 33 8 1 SCOP 49879 SMAD/FHA domain
33 33 16 0 SCOP 49452 Starch-binding domain-like
33 32 8 1 SCOP 103612 SBT domain
32 30 9 5 SCOP 51366 Ribulose-phoshate binding barrel
32 27 10 1 SCOP 50494 Trypsin-like serine proteases
32 32 6 1 SCOP 52490 Tubulin nucleotide-binding domain-like
32 32 10 0 SCOP 47384 Homodimeric domain of signal transducing histidine kinase
32 32 6 0 SCOP 57863 ArfGap/RecO-like zinc finger
32 32 6 1 SCOP 52279 Beta-D-glucan exohydrolase, C-terminal domain
32 31 8 1 SCOP 81631 PAP/OAS1 substrate-binding domain
31 31 9 0 SCOP 111331 NAD kinase/diacylglycerol kinase-like
31 31 4 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
31 29 11 2 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
31 30 15 0 SCOP 82171 DPP6 N-terminal domain-like
29 21 8 2 SCOP 55781 GAF domain-like
29 29 8 1 SCOP 49723 Lipase/lipooxygenase domain (PLAT/LH2 domain)
29 6 4 0 SCOP 81698 FF domain
28 25 5 2 SCOP 100950 NagB/RpiA/CoA transferase-like
28 28 8 1 SCOP 56399 ADP-ribosylation
28 27 3 1 SCOP 55307 Tubulin C-terminal domain-like
28 14 7 0 SCOP 47762 PAH2 domain
27 26 13 6 SCOP 51556 Metallo-dependent hydrolases
27 26 7 3 SCOP 48150 DNA-glycosylase
27 27 7 1 SCOP 47576 Calponin-homology domain, CH-domain
27 27 14 1 SCOP 52954 Class II aaRS ABD-related
27 23 12 1 SCOP 47592 SWIB/MDM2 domain
26 23 6 0 SCOP 63829 Calcium-dependent phosphotriesterase
26 26 3 1 SCOP 55724 Mog1p/PsbP-like
26 26 5 1 SCOP 48484 Lipoxigenase
26 24 6 1 SCOP 75005 Arabinanase/levansucrase/invertase
26 26 14 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
26 25 7 2 SCOP 52922 TK C-terminal domain-like
26 23 8 0 SCOP 57016 Plant lectins/antimicrobial peptides
26 14 5 1 SCOP 54416 Amine oxidase N-terminal region
25 24 13 1 SCOP 55920 Creatinase/aminopeptidase
25 23 4 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
25 24 3 1 SCOP 56655 Carbohydrate phosphatase
25 25 12 2 SCOP 109604 HD-domain/PDEase-like
25 25 3 1 SCOP 55797 PR-1-like
25 24 9 4 SCOP 52467 DHS-like NAD/FAD-binding domain
25 17 11 0 SCOP 69065 RNase III domain-like
25 25 10 0 SCOP 81923 Double Clp-N motif
25 21 12 1 SCOP 52440 PreATP-grasp domain
25 25 2 1 SCOP 48445 14-3-3 protein
25 24 10 1 SCOP 101690 PAZ domain
24 23 6 1 SCOP 75304 Amidase signature (AS) enzymes
24 8 1 1 SCOP 55973 S-adenosylmethionine synthetase
23 23 6 0 SCOP 57829 Zn-binding ribosomal proteins
23 23 8 0 SCOP 103657 BAR/IMD domain-like
23 23 7 3 SCOP 102114 Radical SAM enzymes
23 23 6 0 SCOP 53649 Alkaline phosphatase-like
23 19 6 2 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
23 23 2 1 SCOP 111352 Ammonium transporter
23 23 5 0 SCOP 50800 PK beta-barrel domain-like
23 19 6 0 SCOP 118310 AN1-like Zinc finger
23 19 9 0 SCOP 55666 Ribonuclease PH domain 2-like
22 20 7 2 SCOP 53927 Cytidine deaminase-like
22 22 7 2 SCOP 52218 Flavoproteins
22 21 11 1 SCOP 75217 alpha/beta knot
22 22 5 0 SCOP 53822 Periplasmic binding protein-like I
22 22 8 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
22 13 5 2 SCOP 47203 Acyl-CoA dehydrogenase C-terminal domain-like
22 22 6 1 SCOP 55060 GHMP Kinase, C-terminal domain
22 22 3 1 SCOP 55031 Bacterial exopeptidase dimerisation domain
22 16 7 0 SCOP 109905 Surp module (SWAP domain)
21 21 4 1 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
21 21 8 0 SCOP 161111 Cation efflux protein transmembrane domain-like
21 20 3 1 SCOP 56574 Serpins
21 21 5 1 SCOP 55103 FAD-linked oxidases, C-terminal domain
21 21 13 0 SCOP 81995 beta-sandwich domain of Sec23/24
21 21 5 1 SCOP 56327 LDH C-terminal domain-like
21 21 4 0 SCOP 117892 Band 7/SPFH domain
21 21 2 1 SCOP 47874 Annexin
21 21 3 0 SCOP 50386 STI-like
20 20 7 2 SCOP 52151 FabD/lysophospholipase-like
20 19 7 2 SCOP 55931 Glutamine synthetase/guanido kinase
20 20 4 1 SCOP 102405 MCP/YpsA-like
20 19 9 0 SCOP 57783 Zinc beta-ribbon
20 16 8 1 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
20 20 6 0 SCOP 48019 post-AAA+ oligomerization domain-like
20 20 7 0 SCOP 49354 PapD-like
19 19 3 2 SCOP 47240 Ferritin-like
19 18 9 2 SCOP 53633 Carbamate kinase-like
19 19 9 1 SCOP 88723 PIN domain-like
19 19 2 0 SCOP 52091 SpoIIaa-like
19 14 10 0 SCOP 57889 Cysteine-rich domain
18 16 6 2 SCOP 54197 HIT-like
18 9 1 0 SCOP 81333 F1F0 ATP synthase subunit C
18 18 2 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
18 18 5 0 SCOP 46579 Prefoldin
18 18 5 0 SCOP 51306 LexA/Signal peptidase
18 18 5 0 SCOP 47676 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
18 18 6 0 SCOP 47769 SAM/Pointed domain
18 18 4 1 SCOP 81382 Skp1 dimerisation domain-like
17 17 6 1 SCOP 52080 Ribosomal proteins L15p and L18e
17 16 4 1 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
17 16 6 1 SCOP 50475 FMN-binding split barrel
17 15 7 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
17 17 3 1 SCOP 49777 PEBP-like
17 17 5 2 SCOP 52768 Arginase/deacetylase
17 17 6 1 SCOP 52016 LeuD/IlvD-like
17 14 10 0 SCOP 47781 RuvA domain 2-like
17 17 2 0 SCOP 52935 PK C-terminal domain-like
17 17 3 1 SCOP 52210 Succinyl-CoA synthetase domains
17 16 5 1 SCOP 49998 Amine oxidase catalytic domain
17 16 7 1 SCOP 49348 Clathrin adaptor appendage domain
17 17 8 1 SCOP 49447 Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
16 16 5 0 SCOP 47336 ACP-like
16 16 5 1 SCOP 56317 Carbon-nitrogen hydrolase
16 16 11 1 SCOP 47819 HRDC-like
16 16 3 1 SCOP 51069 Carbonic anhydrase
16 16 4 0 SCOP 55136 Probable bacterial effector-binding domain
16 16 9 0 SCOP 48334 DNA repair protein MutS, domain III
16 16 10 0 SCOP 144232 HIT/MYND zinc finger-like
16 16 5 0 SCOP 63491 BAG domain
16 12 3 1 SCOP 47862 Saposin
15 15 9 0 SCOP 55174 Alpha-L RNA-binding motif
15 15 4 2 SCOP 48557 L-aspartase-like
15 15 9 1 SCOP 54862 4Fe-4S ferredoxins
15 14 3 1 SCOP 56815 Sec1/munc18-like (SM) proteins
15 15 3 1 SCOP 54648 DLC
15 15 4 1 SCOP 143113 NAP-like
15 15 4 0 SCOP 64268 PX domain
15 15 4 1 SCOP 82704 AlbA-like
15 10 4 1 SCOP 56014 Nitrite and sulphite reductase 4Fe-4S domain-like
15 15 3 0 SCOP 47090 PGBD-like
15 12 9 1 SCOP 158702 Sec63 N-terminal domain-like
15 15 8 0 SCOP 46774 ARID-like
15 15 3 0 SCOP 54529 Mitochondrial glycoprotein MAM33-like
15 15 8 0 SCOP 55277 GYF domain
15 13 3 0 SCOP 140383 BSD domain-like
14 14 6 1 SCOP 56808 Ribosomal protein L1
14 14 5 0 SCOP 46946 S13-like H2TH domain
14 14 2 1 SCOP 47226 Histidine-containing phosphotransfer domain, HPT domain
14 14 6 1 SCOP 81340 Clc chloride channel
14 14 2 0 SCOP 54736 ClpS-like
14 8 5 0 SCOP 88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors
14 13 5 2 SCOP 51604 Enolase C-terminal domain-like
14 14 5 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
14 14 8 1 SCOP 51246 Rudiment single hybrid motif
14 14 6 0 SCOP 101898 NHL repeat
14 13 5 1 SCOP 54826 Enolase N-terminal domain-like
14 8 5 1 SCOP 56053 Ribosomal protein L6
14 14 6 1 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
14 14 5 0 SCOP 48350 GTPase activation domain, GAP
14 14 8 1 SCOP 56204 Hect, E3 ligase catalytic domain
14 14 5 0 SCOP 110004 Glycolipid transfer protein, GLTP
14 14 9 1 SCOP 48425 Sec7 domain
14 14 4 0 SCOP 110942 HSP90 C-terminal domain
14 14 6 0 SCOP 55711 Subdomain of clathrin and coatomer appendage domain
13 13 3 1 SCOP 53784 Phosphofructokinase
13 13 7 1 SCOP 52949 Macro domain-like
13 13 6 0 SCOP 50044 SH3-domain
13 11 8 1 SCOP 88713 Glycoside hydrolase/deacetylase
13 12 6 1 SCOP 50993 Peptidase/esterase 'gauge' domain
13 13 5 2 SCOP 56645 Acyl-CoA dehydrogenase NM domain-like
13 12 3 1 SCOP 55895 Ribonuclease Rh-like
13 13 4 1 SCOP 48056 Di-copper centre-containing domain
13 11 9 0 SCOP 68906 SAP domain
13 13 4 0 SCOP 144083 Magnesium transport protein CorA, transmembrane region
13 13 8 1 SCOP 82754 C-terminal, gelsolin-like domain of Sec23/24
13 10 5 0 SCOP 57933 TAZ domain
13 13 7 1 SCOP 81811 Helical domain of Sec23/24
13 13 7 0 SCOP 82919 Zn-finger domain of Sec23/24
12 12 2 1 SCOP 50193 Ribosomal protein L14
12 8 3 2 SCOP 51726 UROD/MetE-like
12 12 2 1 SCOP 144000 Oxysterol-binding protein-like
12 12 3 0 SCOP 102712 JAB1/MPN domain
12 9 4 1 SCOP 54909 Dimeric alpha+beta barrel
12 12 5 1 SCOP 52425 Cryptochrome/photolyase, N-terminal domain
12 10 8 1 SCOP 51338 Composite domain of metallo-dependent hydrolases
12 10 5 0 SCOP 50814 Lipocalins
12 12 3 1 SCOP 54626 Chalcone isomerase
12 12 5 1 SCOP 89124 Nop domain
12 12 2 1 SCOP 54654 CI-2 family of serine protease inhibitors
12 10 4 0 SCOP 54403 Cystatin/monellin
12 12 4 0 SCOP 160443 SMR domain-like
12 12 8 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
12 12 6 1 SCOP 81271 TGS-like
12 6 5 0 SCOP 49303 beta-Galactosidase/glucuronidase domain
12 12 3 1 SCOP 75632 Cullin homology domain
11 11 3 2 SCOP 53697 SIS domain
11 11 4 2 SCOP 55821 YrdC/RibB
11 11 3 0 SCOP 46561 Ribosomal protein L29 (L29p)
11 11 4 1 SCOP 48613 Heme oxygenase-like
11 8 6 1 SCOP 53590 Nucleoside hydrolase
11 11 8 0 SCOP 47027 Acyl-CoA binding protein
11 6 4 2 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
11 10 5 1 SCOP 54447 ssDNA-binding transcriptional regulator domain
11 11 3 1 SCOP 50692 ADC-like
11 11 5 1 SCOP 101112 Oxygen-evolving enhancer protein 3,
11 11 4 1 SCOP 53732 Aconitase iron-sulfur domain
11 11 5 1 SCOP 48173 Cryptochrome/photolyase FAD-binding domain
11 3 3 0 SCOP 50199 Staphylococcal nuclease
11 11 4 1 SCOP 48225 Seven-hairpin glycosidases
11 8 4 1 SCOP 56042 PurM C-terminal domain-like
11 8 4 1 SCOP 55326 PurM N-terminal domain-like
11 11 5 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
11 11 4 0 SCOP 101576 Supernatant protein factor (SPF), C-terminal domain
11 11 5 1 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
11 11 5 0 SCOP 82708 R3H domain
11 11 6 0 SCOP 63570 PABC (PABP) domain
11 11 4 0 SCOP 158639 ENT-like
11 11 4 0 SCOP 54368 Glutamine synthetase, N-terminal domain
11 11 4 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
10 10 4 0 SCOP 54570 Ribosomal protein S19
10 9 4 1 SCOP 75620 Release factor
10 10 2 1 SCOP 50324 Inorganic pyrophosphatase
10 10 5 1 SCOP 52980 Restriction endonuclease-like
10 10 3 0 SCOP 160369 Ribosomal protein L10-like
10 10 3 1 SCOP 52161 Ribosomal protein L13
10 10 4 0 SCOP 47060 S15/NS1 RNA-binding domain
10 10 2 2 SCOP 51316 Mss4-like
10 10 3 0 SCOP 55129 Ribosomal protein L30p/L7e
10 10 3 0 SCOP 47072 Cysteine alpha-hairpin motif
10 10 1 1 SCOP 55770 Profilin (actin-binding protein)
10 10 4 0 SCOP 57802 Rubredoxin-like
10 9 3 1 SCOP 102198 Putative cyclase
10 10 8 1 SCOP 55186 ThrRS/AlaRS common domain
10 10 3 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
10 9 4 0 SCOP 50405 Actin-crosslinking proteins
10 7 3 1 SCOP 55945 TATA-box binding protein-like
10 5 2 1 SCOP 55124 Nitrite/Sulfite reductase N-terminal domain-like
10 10 5 0 SCOP 158573 GINS helical bundle-like
10 10 4 0 SCOP 144074 E2F-DP heterodimerization region
10 10 7 1 SCOP 88688 Families 57/38 glycoside transferase middle domain
10 8 3 0 SCOP 143791 DUSP-like
10 10 3 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
10 10 3 1 SCOP 81822 RuBisCo LSMT C-terminal, substrate-binding domain
10 10 3 0 SCOP 54556 Chitinase insertion domain
10 10 4 0 SCOP 46942 Elongation factor TFIIS domain 2
10 10 2 1 SCOP 54585 Cdc48 domain 2-like
9 9 2 0 SCOP 54686 Ribosomal protein L16p/L10e
9 9 3 1 SCOP 55282 RL5-like
9 9 4 1 SCOP 103491 Preprotein translocase SecY subunit
9 9 4 1 SCOP 50715 Ribosomal protein L25-like
9 9 6 2 SCOP 51419 PLP-binding barrel
9 9 2 0 SCOP 144122 Tim10-like
9 9 5 0 SCOP 54897 Protease propeptides/inhibitors
9 9 3 1 SCOP 111126 Ligand-binding domain in the NO signalling and Golgi transport
9 9 3 1 SCOP 53056 beta-carbonic anhydrase, cab
9 9 3 1 SCOP 55159 eIF1-like
9 8 5 0 SCOP 58113 Apolipoprotein A-I
9 9 1 1 SCOP 55418 eIF4e-like
9 8 4 1 SCOP 53800 Chelatase
9 8 5 0 SCOP 88946 Sigma2 domain of RNA polymerase sigma factors
9 9 3 0 SCOP 55154 CYTH-like phosphatases
9 8 6 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
9 7 4 1 SCOP 55979 DNA clamp
9 9 2 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
9 9 5 1 SCOP 55957 Phosphoglucomutase, C-terminal domain
9 9 3 1 SCOP 118359 Expressed protein At2g23090/F21P24.15
9 9 3 0 SCOP 48340 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
9 9 4 0 SCOP 140111 Endosomal sorting complex assembly domain
9 9 4 0 SCOP 50916 Rap30/74 interaction domains
9 9 7 0 SCOP 159042 Plus3-like
9 9 6 0 SCOP 161245 Zinc hairpin stack
9 9 2 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
9 9 4 0 SCOP 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
8 8 3 1 SCOP 47973 Ribosomal protein S7
8 8 2 1 SCOP 54999 Ribosomal protein S10
8 8 4 1 SCOP 52166 Ribosomal protein L4
8 8 1 1 SCOP 56047 Ribosomal protein S8
8 4 2 0 SCOP 56214 4'-phosphopantetheinyl transferase
8 8 4 1 SCOP 53597 Dihydrofolate reductase-like
8 8 4 0 SCOP 110324 Ribosomal L27 protein-like
8 8 3 0 SCOP 143800 L28p-like
8 8 4 1 SCOP 82649 SufE/NifU
8 8 3 1 SCOP 51730 FAD-linked oxidoreductase
8 8 3 1 SCOP 56276 S-adenosylmethionine decarboxylase
8 8 3 1 SCOP 142695 RibA-like
8 8 3 0 SCOP 52042 Ribosomal protein L32e
8 8 4 2 SCOP 46626 Cytochrome c
8 8 3 1 SCOP 56322 ADC synthase
8 8 2 1 SCOP 55144 LigT-like
8 8 3 1 SCOP 56019 The spindle assembly checkpoint protein mad2
8 8 5 1 SCOP 48439 Protein prenylyltransferase
8 8 4 1 SCOP 49329 Cu,Zn superoxide dismutase-like
8 6 6 1 SCOP 69645 Arp2/3 complex subunits
8 8 3 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
8 8 5 0 SCOP 161219 CHY zinc finger-like
8 8 5 0 SCOP 55257 RBP11-like subunits of RNA polymerase
8 8 4 1 SCOP 56524 Oxidoreductase molybdopterin-binding domain
8 8 7 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
8 8 3 1 SCOP 46548 alpha-helical ferredoxin
8 8 5 0 SCOP 53092 Creatinase/prolidase N-terminal domain
8 4 4 1 SCOP 51101 Mannose-binding lectins
8 8 5 0 SCOP 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
8 8 7 0 SCOP 55550 SH2 domain
8 8 3 0 SCOP 47895 Transducin (alpha subunit), insertion domain
8 8 2 1 SCOP 55481 N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
8 8 2 0 SCOP 57095 Scorpion toxin-like
8 4 3 1 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
8 8 6 0 SCOP 75553 Smc hinge domain
8 8 3 0 SCOP 55003 PAP/Archaeal CCA-adding enzyme, C-terminal domain
8 8 2 1 SCOP 63887 P-domain of calnexin/calreticulin
8 8 3 0 SCOP 160219 AMPKBI-like
7 7 3 1 SCOP 53790 Tetrapyrrole methylase
7 6 3 1 SCOP 53178 Peptidyl-tRNA hydrolase-like
7 7 4 1 SCOP 55068 Peptide methionine sulfoxide reductase
7 6 3 0 SCOP 89360 HesB-like domain
7 7 4 1 SCOP 64005 Undecaprenyl diphosphate synthase
7 7 3 0 SCOP 82657 BolA-like
7 6 2 0 SCOP 48140 Ribosomal protein L19 (L19e)
7 7 3 1 SCOP 48256 Citrate synthase
7 7 2 0 SCOP 47694 Cytochrome c oxidase subunit h
7 7 4 0 SCOP 141571 Pentapeptide repeat-like
7 7 2 0 SCOP 55331 Tautomerase/MIF
7 7 3 0 SCOP 47413 lambda repressor-like DNA-binding domains
7 7 4 0 SCOP 110857 Gamma-glutamyl cyclotransferase-like
7 7 2 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
7 6 3 1 SCOP 56726 DNA topoisomerase IV, alpha subunit
7 7 3 0 SCOP 46589 tRNA-binding arm
7 7 3 0 SCOP 50370 Ricin B-like lectins
7 6 5 1 SCOP 56719 Type II DNA topoisomerase
7 7 2 0 SCOP 49384 Carbohydrate-binding domain
7 7 5 1 SCOP 50621 Alanine racemase C-terminal domain-like
7 7 3 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
7 7 6 1 SCOP 53623 MurD-like peptide ligases, catalytic domain
7 7 3 0 SCOP 52075 Outer arm dynein light chain 1
7 7 4 0 SCOP 100966 Translation initiation factor 2 beta, aIF2beta, N-terminal domain
7 7 4 0 SCOP 55271 DNA repair protein MutS, domain I
7 7 2 0 SCOP 57277 Granulin repeat
7 7 3 0 SCOP 109715 DEK C-terminal domain
7 7 3 0 SCOP 143503 PUG domain-like
7 7 2 0 SCOP 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain
6 5 4 0 SCOP 53167 Purine and uridine phosphorylases
6 6 4 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
6 6 3 1 SCOP 51351 Triosephosphate isomerase (TIM)
6 6 3 1 SCOP 52313 Ribosomal protein S2
6 6 6 0 SCOP 101908 Putative isomerase YbhE
6 4 2 1 SCOP 55298 YjgF-like
6 6 4 0 SCOP 54995 Ribosomal protein S6
6 6 2 0 SCOP 54575 Ribosomal protein L31e
6 6 4 1 SCOP 53328 Formyltransferase
6 6 2 1 SCOP 57798 Casein kinase II beta subunit
6 6 3 2 SCOP 52972 ITPase-like
6 6 2 1 SCOP 82282 Homocysteine S-methyltransferase
6 6 1 1 SCOP 55239 RuBisCO, small subunit
6 6 2 0 SCOP 158615 RbcX-like
6 6 3 0 SCOP 143456 VC0467-like
6 6 4 1 SCOP 103025 Folate-binding domain
6 6 3 0 SCOP 101386 all-alpha NTP pyrophosphatases
6 6 6 0 SCOP 69322 Tricorn protease domain 2
6 4 3 0 SCOP 50346 PRC-barrel domain
6 6 2 0 SCOP 55287 RPB5-like RNA polymerase subunit
6 6 2 0 SCOP 116820 Rps17e-like
6 6 3 0 SCOP 160374 RplX-like
6 6 2 1 SCOP 56003 Molybdenum cofactor-binding domain
6 6 5 0 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
6 6 3 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
6 5 3 1 SCOP 48537 Phospholipase C/P1 nuclease
6 6 2 0 SCOP 55658 L9 N-domain-like
6 6 2 0 SCOP 158745 LanC-like
6 6 3 0 SCOP 160059 PriA/YqbF domain
6 6 2 1 SCOP 54665 CO dehydrogenase molybdoprotein N-domain-like
6 6 4 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
6 6 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
6 6 3 0 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
6 6 2 0 SCOP 55447 CO dehydrogenase flavoprotein C-terminal domain-like
6 6 3 0 SCOP 75689 Zinc-binding domain of translation initiation factor 2 beta
6 6 2 1 SCOP 47741 CO dehydrogenase ISP C-domain like
6 6 4 0 SCOP 55545 beta-N-acetylhexosaminidase-like domain
6 6 6 1 SCOP 81837 BEACH domain
6 6 2 0 SCOP 57845 B-box zinc-binding domain
6 6 4 0 SCOP 47396 Transcription factor IIA (TFIIA), alpha-helical domain
6 6 5 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
6 6 1 1 SCOP 88798 N-terminal, heterodimerisation domain of RBP7 (RpoE)
6 6 3 0 SCOP 47050 VHP, Villin headpiece domain
6 6 2 1 SCOP 101233 PWI domain
6 6 2 1 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
6 6 2 0 SCOP 53036 Eukaryotic RPB5 N-terminal domain
5 5 3 0 SCOP 54843 Ribosomal protein L22
5 5 2 1 SCOP 64263 Prokaryotic ribosomal protein L17
5 5 3 1 SCOP 51713 tRNA-guanine transglycosylase
5 5 4 1 SCOP 52121 Lumazine synthase
5 5 2 1 SCOP 56634 Heme-dependent catalase-like
5 5 2 1 SCOP 101960 Stabilizer of iron transporter SufD
5 3 2 0 SCOP 56601 beta-lactamase/transpeptidase-like
5 5 2 1 SCOP 53795 PEP carboxykinase-like
5 4 4 1 SCOP 53218 Molybdenum cofactor biosynthesis proteins
5 5 2 0 SCOP 158997 Trm112p-like
5 5 4 1 SCOP 48600 Chorismate mutase II
5 5 2 1 SCOP 52335 Methylglyoxal synthase-like
5 4 4 1 SCOP 111321 AF1104-like
5 5 3 1 SCOP 54984 eEF-1beta-like
5 5 3 1 SCOP 102462 Peptidyl-tRNA hydrolase II
5 5 4 0 SCOP 158832 Tex N-terminal region-like
5 5 2 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
5 3 2 0 SCOP 69318 Integrin alpha N-terminal domain
5 5 2 0 SCOP 48619 Phospholipase A2, PLA2
5 5 5 0 SCOP 63825 YWTD domain
5 5 4 1 SCOP 142921 WGR domain-like
5 5 2 0 SCOP 118116 DNA mismatch repair protein MutL
5 5 4 0 SCOP 52129 Caspase-like
5 5 1 0 SCOP 49265 Fibronectin type III
5 5 3 0 SCOP 81891 Poly A polymerase C-terminal region-like
5 5 3 0 SCOP 143548 Serine metabolism enzymes domain
5 5 3 0 SCOP 56973 Aerolisin/ETX pore-forming domain
5 4 3 0 SCOP 102735 Trigger factor ribosome-binding domain
5 5 3 1 SCOP 143975 IlvD/EDD N-terminal domain-like
5 5 2 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
5 4 3 0 SCOP 47446 Signal peptide-binding domain
5 5 1 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
5 5 4 0 SCOP 57414 Hairpin loop containing domain-like
5 5 2 0 SCOP 50911 Mannose 6-phosphate receptor domain
5 5 2 1 SCOP 89942 eEF1-gamma domain
5 5 4 0 SCOP 103243 KA1-like
5 5 3 0 SCOP 160527 V-type ATPase subunit E-like
5 5 3 0 SCOP 50784 Transcription factor IIA (TFIIA), beta-barrel domain
5 4 3 1 SCOP 81886 Helical scaffold and wing domains of SecA
5 5 3 1 SCOP 56741 Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
5 5 3 1 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
5 5 1 0 SCOP 81502 ISP transmembrane anchor
5 5 4 1 SCOP 47587 Domain of poly(ADP-ribose) polymerase
5 5 4 0 SCOP 101238 XPC-binding domain
4 4 3 0 SCOP 56731 DNA primase core
4 4 1 1 SCOP 56420 Peptide deformylase
4 4 1 0 SCOP 143034 L35p-like
4 4 2 1 SCOP 74731 Ribosomal protein L20
4 4 2 0 SCOP 141091 L21p-like
4 4 2 1 SCOP 53748 Phosphoglycerate kinase
4 4 1 1 SCOP 55194 Ribosome recycling factor, RRF
4 4 1 0 SCOP 54565 Ribosomal protein S16
4 4 1 1 SCOP 56770 HydA/Nqo6-like
4 4 3 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
4 4 1 1 SCOP 54285 MoaD/ThiS
4 4 2 1 SCOP 55205 EPT/RTPC-like
4 4 2 0 SCOP 140718 Mediator hinge subcomplex-like
4 4 1 0 SCOP 52499 Isochorismatase-like hydrolases
4 4 2 0 SCOP 63393 RNA polymerase subunits
4 4 1 0 SCOP 81514 Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
4 4 1 2 SCOP 90096 Subunits of heterodimeric actin filament capping protein Capz
4 4 3 0 SCOP 69103 Arp2/3 complex 16 kDa subunit ARPC5
4 4 2 0 SCOP 103486 V-type ATP synthase subunit C
4 4 4 1 SCOP 56529 FAH
4 4 2 0 SCOP 103111 Activator of Hsp90 ATPase, Aha1
4 4 2 1 SCOP 46924 RNA polymerase subunit RPB10
4 4 1 0 SCOP 143447 AMMECR1-like
4 4 1 2 SCOP 55909 Pentein
4 4 1 1 SCOP 46458 Globin-like
4 4 1 0 SCOP 50090 Electron transport accessory proteins
4 4 1 0 SCOP 161084 MAPEG domain-like
4 2 2 0 SCOP 46955 Putative DNA-binding domain
4 4 2 0 SCOP 82697 PurS-like
4 4 2 1 SCOP 56349 DNA breaking-rejoining enzymes
4 4 1 0 SCOP 103256 Hypothetical protein TM0160
4 4 2 1 SCOP 64167 SurE-like
4 4 1 1 SCOP 143990 YbiA-like
4 4 1 1 SCOP 56762 HydB/Nqo4-like
4 4 2 0 SCOP 55200 Translation initiation factor IF3, C-terminal domain
4 4 3 1 SCOP 51391 Thiamin phosphate synthase
4 4 1 0 SCOP 51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
4 4 2 1 SCOP 55826 YbaK/ProRS associated domain
4 4 3 0 SCOP 56747 Prim-pol domain
4 4 3 0 SCOP 56821 Prismane protein-like
4 4 2 0 SCOP 53182 Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
4 4 2 1 SCOP 50486 FMT C-terminal domain-like
4 4 3 0 SCOP 75011 3-carboxy-cis,cis-mucoante lactonizing enzyme
4 4 2 0 SCOP 69786 YggU-like
4 4 4 1 SCOP 100939 SPOC domain-like
4 4 1 1 SCOP 89562 RraA-like
4 4 2 0 SCOP 143437 THUMP domain-like
4 4 3 1 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
4 4 1 0 SCOP 143865 CorA soluble domain-like
4 4 3 1 SCOP 69336 Alpha subunit of glutamate synthase, C-terminal domain
4 2 2 0 SCOP 89372 Fucose-specific lectin
4 4 3 0 SCOP 55608 Homing endonucleases
4 4 1 0 SCOP 54821 Ribosomal protein S3 C-terminal domain
4 4 1 1 SCOP 68923 PEP carboxykinase N-terminal domain
4 2 1 0 SCOP 53681 Aspartate/glutamate racemase
4 4 3 1 SCOP 52418 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
4 4 3 0 SCOP 47162 Apolipoprotein
4 4 2 0 SCOP 141673 MOSC N-terminal domain-like
4 4 2 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
4 4 2 0 SCOP 90002 Hypothetical protein YjiA, C-terminal domain
4 4 2 0 SCOP 117289 Nucleoporin domain
4 4 2 0 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
4 4 3 1 SCOP 55637 Cell cycle regulatory proteins
4 4 3 0 SCOP 101278 N-terminal domain of adenylylcyclase associated protein, CAP
4 4 2 0 SCOP 47794 Rad51 N-terminal domain-like
4 4 1 0 SCOP 55116 Formiminotransferase domain of formiminotransferase-cyclodeaminase.
4 4 1 0 SCOP 47933 ERP29 C domain-like
4 4 2 0 SCOP 54752 RecA protein, C-terminal domain
4 4 3 0 SCOP 74924 Cap-Gly domain
4 4 2 0 SCOP 57184 Growth factor receptor domain
4 4 1 1 SCOP 101152 Mob1/phocein
4 4 2 0 SCOP 100895 Kazal-type serine protease inhibitors
4 2 1 0 SCOP 55394 Bactericidal permeability-increasing protein, BPI
4 4 2 0 SCOP 116846 MIT domain
4 4 1 0 SCOP 161065 ATP synthase D chain-like
4 4 2 0 SCOP 47672 Transferrin receptor-like dimerisation domain
4 4 2 0 SCOP 103107 Hypothetical protein c14orf129, hspc210
4 4 2 1 SCOP 64158 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
4 4 2 1 SCOP 109920 Hypothetical protein At3g22680
4 4 3 1 SCOP 117018 ATP-dependent DNA ligase DNA-binding domain
4 4 2 0 SCOP 102848 NSFL1 (p97 ATPase) cofactor p47, SEP domain
4 4 2 1 SCOP 82215 C-terminal autoproteolytic domain of nucleoporin nup98
4 4 2 1 SCOP 50989 Clathrin heavy-chain terminal domain
4 4 3 1 SCOP 69340 C-terminal domain of adenylylcyclase associated protein
4 4 2 0 SCOP 140612 EB1 dimerisation domain-like
4 2 1 0 SCOP 160897 Taf5 N-terminal domain-like
4 4 1 0 SCOP 55653 Ribosomal protein L9 C-domain
4 4 1 0 SCOP 144256 TSP9-like
4 4 1 1 SCOP 116768 DNA-binding domain of EIN3-like
4 4 3 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
4 4 2 0 SCOP 81496 Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
4 4 2 1 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
4 4 2 0 SCOP 53150 DNA repair protein MutS, domain II
4 4 3 1 SCOP 81767 Pre-protein crosslinking domain of SecA
4 4 4 0 SCOP 46915 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
4 4 2 0 SCOP 109736 FGAM synthase PurL, linker domain
4 4 2 0 SCOP 158230 PRP4-like
3 3 3 0 SCOP 48013 NusB-like
3 3 2 0 SCOP 110296 Oligoxyloglucan reducing end-specific cellobiohydrolase
3 3 1 0 SCOP 142897 TFB5-like
3 3 1 0 SCOP 103456 Preprotein translocase SecE subunit
3 3 2 2 SCOP 54506 Diaminopimelate epimerase-like
3 3 2 0 SCOP 144210 Nop10-like SnoRNP
3 3 2 1 SCOP 69060 Arp2/3 complex 21 kDa subunit ARPC3
3 3 1 1 SCOP 161077 Photosystem II antenna protein-like
3 3 1 1 SCOP 51998 PFL-like glycyl radical enzymes
3 3 1 1 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
3 3 2 1 SCOP 56266 DmpA/ArgJ-like
3 3 2 0 SCOP 89550 PHP domain-like
3 3 2 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
3 3 2 1 SCOP 54913 GlnB-like
3 3 1 0 SCOP 159501 EreA/ChaN-like
3 3 2 0 SCOP 50952 Soluble quinoprotein glucose dehydrogenase
3 2 2 1 SCOP 158694 UraD-Like
3 2 2 0 SCOP 110916 Peptidyl-tRNA hydrolase domain-like
3 3 2 1 SCOP 160909 ATP12-like
3 3 3 1 SCOP 110069 ApaG-like
3 3 2 0 SCOP 141130 Acetamidase/Formamidase-like
3 3 1 0 SCOP 64076 MTH938-like
3 3 3 0 SCOP 142764 YgbK-like
3 3 1 0 SCOP 48695 Multiheme cytochromes
3 3 2 1 SCOP 74784 Translin
3 2 2 0 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
3 3 1 1 SCOP 82114 Riboflavin kinase-like
3 1 1 0 SCOP 69304 Tricorn protease N-terminal domain
3 3 2 0 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
3 3 2 0 SCOP 51971 Nucleotide-binding domain
3 3 1 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
3 3 1 0 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
3 3 2 0 SCOP 116742 eIF2alpha middle domain-like
3 3 2 1 SCOP 69000 FAD-dependent thiol oxidase
3 3 2 1 SCOP 140102 ISY1 domain-like
3 3 2 1 SCOP 110993 eIF-2-alpha, C-terminal domain
3 3 1 0 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
3 3 2 0 SCOP 140427 VPS28 C-terminal domain-like
3 3 2 0 SCOP 64586 C-terminal domain of ProRS
3 3 1 0 SCOP 101821 Aminopeptidase/glucanase lid domain
3 3 1 0 SCOP 54364 Translation initiation factor IF3, N-terminal domain
3 2 2 0 SCOP 101224 HAND domain of the nucleosome remodeling ATPase ISWI
3 3 2 0 SCOP 57770 Methionyl-tRNA synthetase (MetRS), Zn-domain
3 3 3 0 SCOP 81878 BRCA2 tower domain
2 2 2 0 SCOP 46911 Ribosomal protein S18
2 2 1 1 SCOP 52141 Uracil-DNA glycosylase-like
2 2 2 0 SCOP 89919 Ribosome-binding factor A, RbfA
2 2 1 0 SCOP 57840 Ribosomal protein L36
2 2 1 0 SCOP 64182 DHH phosphoesterases
2 2 2 1 SCOP 55831 Thymidylate synthase/dCMP hydroxymethylase
2 2 1 1 SCOP 51658 Xylose isomerase-like
2 2 1 1 SCOP 82549 DAK1/DegV-like
2 2 2 1 SCOP 75625 YebC-like
2 2 1 0 SCOP 46992 Ribosomal protein S20
2 2 2 1 SCOP 69765 IpsF-like
2 2 1 1 SCOP 103263 Chorismate synthase, AroC
2 2 1 1 SCOP 51283 dUTPase-like
2 2 1 1 SCOP 56796 Dehydroquinate synthase-like
2 2 1 1 SCOP 55387 Frataxin/Nqo15-like
2 2 1 0 SCOP 144217 CSL zinc finger
2 1 1 0 SCOP 55469 FMN-dependent nitroreductase-like
2 2 1 0 SCOP 81321 Family A G protein-coupled receptor-like
2 2 2 0 SCOP 141678 MAL13P1.257-like
2 2 2 0 SCOP 54762 Signal recognition particle alu RNA binding heterodimer, SRP9/14
2 2 1 1 SCOP 69500 DTD-like
2 2 2 1 SCOP 102886 Coproporphyrinogen III oxidase
2 2 1 0 SCOP 81524 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
2 2 2 0 SCOP 111278 SSo0622-like
2 2 1 0 SCOP 81411 Mitochondrial cytochrome c oxidase subunit VIa
2 2 1 0 SCOP 55248 PCD-like
2 2 1 0 SCOP 89895 FYSH domain
2 2 1 0 SCOP 51645 Malate synthase G
2 2 2 0 SCOP 53639 AraD/HMP-PK domain-like
2 2 1 0 SCOP 140959 Indolic compounds 2,3-dioxygenase-like
2 2 1 1 SCOP 118203 Vacuolar ATP synthase subunit C
2 2 1 0 SCOP 110849 ParB/Sulfiredoxin
2 2 1 0 SCOP 143870 PF0523-like
2 2 1 0 SCOP 53032 tRNA-intron endonuclease catalytic domain-like
2 2 1 1 SCOP 64153 YjeF N-terminal domain-like
2 2 1 0 SCOP 46988 Tubulin chaperone cofactor A
2 2 1 0 SCOP 69618 HemD-like
2 2 2 0 SCOP 48690 Epsilon subunit of mitochondrial F1F0-ATP synthase
2 2 2 1 SCOP 52788 Phosphotyrosine protein phosphatases I
2 2 1 1 SCOP 63562 RPB6/omega subunit-like
2 2 1 1 SCOP 81442 Cytochrome c oxidase subunit I-like
2 2 2 0 SCOP 141734 HisI-like
2 2 1 1 SCOP 57662 Ferredoxin thioredoxin reductase (FTR), catalytic beta chain
2 2 1 1 SCOP 64234 Photosystem I subunit PsaD
2 2 1 1 SCOP 81536 Subunit III of photosystem I reaction centre, PsaF
2 2 1 0 SCOP 81563 Photosystem I reaction center subunit X, PsaK
2 2 2 1 SCOP 81568 Photosystem I reaction center subunit XI, PsaL
2 2 1 1 SCOP 101546 ASF1-like
2 2 1 0 SCOP 111038 YjbQ-like
2 2 1 1 SCOP 55040 Molybdenum cofactor biosynthesis protein C, MoaC
2 2 1 0 SCOP 144020 FdhE-like
2 2 1 1 SCOP 51717 Dihydropteroate synthetase-like
2 2 2 0 SCOP 55718 SCP-like
2 2 2 1 SCOP 118196 YaeB-like
2 2 1 0 SCOP 142754 NadA-like
2 2 1 0 SCOP 82771 GIY-YIG endonuclease
2 2 1 0 SCOP 53807 "Helical backbone" metal receptor
2 2 1 0 SCOP 55083 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
2 2 2 0 SCOP 54690 Molybdopterin synthase subunit MoaE
2 2 1 0 SCOP 141000 Glu-tRNAGln amidotransferase C subunit
2 2 2 1 SCOP 54111 Urease, gamma-subunit
2 2 2 1 SCOP 51278 Urease, beta-subunit
2 2 1 1 SCOP 143081 BB1717-like
2 2 1 0 SCOP 54975 Acylphosphatase/BLUF domain-like
2 2 1 0 SCOP 89095 GatB/YqeY motif
2 2 1 0 SCOP 109910 YgfY-like
2 2 2 0 SCOP 49472 Transthyretin (synonym: prealbumin)
2 2 1 1 SCOP 110581 Indigoidine synthase A-like
2 2 2 0 SCOP 142338 CofD-like
2 2 1 1 SCOP 101473 DhaL-like
2 2 2 1 SCOP 51219 TRAP-like
2 2 1 1 SCOP 56925 OMPA-like
2 2 1 0 SCOP 69754 Ribosome binding protein Y (YfiA homologue)
2 2 1 0 SCOP 50939 Sialidases
2 2 1 0 SCOP 158710 PSPTO4464-like
2 2 2 0 SCOP 46950 Double-stranded DNA-binding domain
2 2 1 0 SCOP 160350 Rnp2-like
2 2 2 1 SCOP 69695 SRP19
2 2 2 0 SCOP 63867 MoeA C-terminal domain-like
2 2 1 0 SCOP 53706 Formate dehydrogenase/DMSO reductase, domains 1-3
2 2 2 0 SCOP 82093 Heme chaperone CcmE
2 2 2 0 SCOP 141255 YccV-like
2 2 1 1 SCOP 102645 CoaB-like
2 2 2 0 SCOP 102110 (2r)-phospho-3-sulfolactate synthase ComA
2 2 1 0 SCOP 55234 Cyanase C-terminal domain
2 2 1 1 SCOP 142877 EndoU-like
2 2 1 1 SCOP 52009 Phosphohistidine domain
2 2 1 0 SCOP 49464 Carboxypeptidase regulatory domain-like
2 2 1 0 SCOP 90257 Myosin rod fragments
2 2 1 0 SCOP 144206 NOB1 zinc finger-like
2 2 1 0 SCOP 82679 N-utilization substance G protein NusG, N-terminal domain
2 2 1 0 SCOP 56436 C-type lectin-like
2 2 1 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
2 2 1 0 SCOP 69055 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
2 2 1 0 SCOP 63999 Thiamin pyrophosphokinase, catalytic domain
2 2 1 0 SCOP 58022 XRCC4, C-terminal oligomerization domain
2 2 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
2 2 1 0 SCOP 81585 PsbU/PolX domain-like
2 2 1 1 SCOP 110019 ERO1-like
2 2 1 1 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
2 2 1 1 SCOP 53920 Fe-only hydrogenase
2 2 1 1 SCOP 54810 GMP synthetase C-terminal dimerisation domain
2 2 2 1 SCOP 101904 GyrA/ParC C-terminal domain-like
2 2 1 1 SCOP 140869 GUN4-like
2 2 2 0 SCOP 47648 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
2 2 2 0 SCOP 110836 Hypothetical protein SAV1430
2 2 2 0 SCOP 69075 Glutamyl tRNA-reductase dimerization domain
2 2 1 0 SCOP 141259 CarD-like
2 2 1 0 SCOP 82861 Mechanosensitive channel protein MscS (YggB), transmembrane region
2 2 1 0 SCOP 75420 YhbC-like, N-terminal domain
2 2 1 0 SCOP 54782 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
2 2 2 0 SCOP 140490 Nqo1C-terminal domain-like
2 2 1 1 SCOP 141493 Allene oxide cyclase-like
2 2 1 1 SCOP 56542 Substrate-binding domain of HMG-CoA reductase
2 2 1 0 SCOP 54991 Anticodon-binding domain of PheRS
2 2 2 0 SCOP 110221 AbfB domain
2 2 1 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
2 2 1 1 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
2 2 2 0 SCOP 54452 MHC antigen-recognition domain
2 2 2 0 SCOP 69203 Nucleoplasmin-like core domain
2 2 1 1 SCOP 89817 Mago nashi protein
2 2 1 1 SCOP 82109 MIR domain
2 2 1 0 SCOP 47938 Functional domain of the splicing factor Prp18
2 2 1 1 SCOP 109993 VPS9 domain
2 2 1 1 SCOP 140984 PTPA-like
2 2 1 0 SCOP 48097 Regulator of G-protein signaling, RGS
2 2 1 1 SCOP 69012 alpha-ketoacid dehydrogenase kinase, N-terminal domain
2 2 2 0 SCOP 140106 Calcyclin-binding protein-like
2 2 2 1 SCOP 142019 Nqo1 FMN-binding domain-like
2 2 1 0 SCOP 55261 GAD domain-like
2 2 2 0 SCOP 69742 Glutamyl tRNA-reductase catalytic, N-terminal domain
2 2 1 0 SCOP 47040 Kix domain of CBP (creb binding protein)
2 2 1 1 SCOP 47212 FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
2 2 1 0 SCOP 159065 Dom34/Pelota N-terminal domain-like
2 2 2 0 SCOP 47031 Second domain of FERM
2 2 1 1 SCOP 88802 Pre-PUA domain
2 2 1 0 SCOP 69848 LCCL domain
2 2 1 0 SCOP 63862 Thiamin pyrophosphokinase, substrate-binding domain
2 2 1 0 SCOP 49758 Calpain large subunit, middle domain (domain III)
2 2 2 0 SCOP 101420 C-terminal domain of Ku80
2 2 1 0 SCOP 140586 Dcp2 domain-like
2 2 1 1 SCOP 55035 NAD-binding domain of HMG-CoA reductase
2 2 1 0 SCOP 101790 Aminomethyltransferase beta-barrel domain
2 2 1 0 SCOP 143517 TRCF domain-like
2 2 2 1 SCOP 63433 Fumarylacetoacetate hydrolase, FAH, N-terminal domain
2 2 1 0 SCOP 47802 DNA polymerase beta, N-terminal domain-like
2 2 2 0 SCOP 81799 Putative methyltransferase TM0872, insert domain
2 2 1 0 SCOP 102741 Obg GTP-binding protein C-terminal domain
2 2 1 0 SCOP 109728 Hypothetical protein AF0491, middle domain
2 2 1 0 SCOP 160996 HI0933 insert domain-like
1 1 1 0 SCOP 82607 YbaB-like
1 1 1 0 SCOP 109998 Triger factor/SurA peptide-binding domain-like
1 1 1 0 SCOP 117991 YbeD/HP0495-like
1 1 1 0 SCOP 81508 Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 48662 Ribosomal protein L39e
1 1 1 1 SCOP 81483 Bacterial photosystem II reaction centre, L and M subunits
1 1 1 0 SCOP 103642 Sec-C motif
1 1 1 0 SCOP 58100 Bacterial hemolysins
1 1 1 0 SCOP 101744 Rof/RNase P subunit-like
1 1 1 0 SCOP 103441 PetM subunit of the cytochrome b6f complex
1 1 1 0 SCOP 140663 TTHA0068-like
1 1 1 1 SCOP 53213 LigB-like
1 1 1 0 SCOP 102588 LmbE-like
1 1 1 0 SCOP 160104 Acetoacetate decarboxylase-like
1 1 1 1 SCOP 142535 AF0625-like
1 1 1 0 SCOP 160355 Bacterial polysaccharide co-polymerase-like
1 1 1 0 SCOP 49373 Invasin/intimin cell-adhesion fragments
1 1 1 0 SCOP 56037 PheT/TilS domain
1 1 1 0 SCOP 75704 Mitotic arrest deficient-like 1, Mad1
1 1 1 0 SCOP 142984 Nqo1 middle domain-like
1 1 1 1 SCOP 110111 Ctag/Cox11
1 1 1 0 SCOP 117074 Hypothetical protein PA1324
1 1 1 0 SCOP 68912 Rho N-terminal domain-like
1 1 1 0 SCOP 46600 C-terminal UvrC-binding domain of UvrB
1 1 1 0 SCOP 47144 HSC20 (HSCB), C-terminal oligomerisation domain
1 1 1 0 SCOP 63418 MurE/MurF N-terminal domain
1 1 1 0 SCOP 110921 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
1 1 1 1 SCOP 63882 MoeA N-terminal region -like
1 1 1 0 SCOP 140860 Pseudo ankyrin repeat-like
1 1 1 0 SCOP 81624 N-terminal domain of MutM-like DNA repair proteins
1 1 1 0 SCOP 55904 Ornithine decarboxylase C-terminal domain
1 1 1 0 SCOP 57196 EGF/Laminin
1 1 1 0 SCOP 81531 Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 57774 Microbial and mitochondrial ADK, insert "zinc finger" domain
1 1 1 0 SCOP 88645 ssDNA viruses
1 1 1 1 SCOP 54966 RuBisCO, large subunit, small (N-terminal) domain
1 1 1 0 SCOP 144292 occludin/ELL-like
1 1 1 0 SCOP 101931 Pym (Within the bgcn gene intron protein, WIBG), N-terminal domain

Jump to [ Top of page · Assignment statistics ]


The following superfamilies have one or more weak hits:

SCOP superfamily Troponin coil-coiled subunits
SCOP superfamily Zinc finger domain of DNA polymerase-alpha
SCOP superfamily DPY module
SCOP superfamily Neurotransmitter-gated ion-channel transmembrane pore
SCOP superfamily Hypothetical protein VC0424
SCOP superfamily DNA-binding protein Tfx
SCOP superfamily CoA-transferase family III (CaiB/BaiF)
SCOP superfamily L-sulfolactate dehydrogenase-like
SCOP superfamily Adsorption protein p2
SCOP superfamily Collagen-binding domain
SCOP superfamily Gametocyte protein Pfg27
SCOP superfamily Antibiotic binding domain of TipA-like multidrug resistance regulators
SCOP superfamily post-HMGL domain-like
SCOP superfamily Group I dsDNA viruses
SCOP superfamily Positive stranded ssRNA viruses
SCOP superfamily Tumor suppressor gene product Apc
SCOP superfamily Cysteine-rich DNA binding domain, (DM domain)
SCOP superfamily L-A virus major coat protein
SCOP superfamily MesJ substrate recognition domain-like
SCOP superfamily Mechanosensitive channel protein MscS (YggB), C-terminal domain
SCOP superfamily Probable GTPase Der, C-terminal domain
SCOP superfamily BAH domain
SCOP superfamily N-terminal domain of bifunctional PutA protein
SCOP superfamily Family 10 polysaccharide lyase
SCOP superfamily Myosin phosphatase inhibitor 17kDa protein, CPI-17
SCOP superfamily Crustacean CHH/MIH/GIH neurohormone
SCOP superfamily Plasmid maintenance system epsilon/zeta, antidote epsilon subunit
SCOP superfamily F1F0 ATP synthase subunit B, membrane domain
SCOP superfamily Photosystem I subunits PsaA/PsaB
SCOP superfamily Subunit PsaX of photosystem I reaction centre
SCOP superfamily Cytochrome c oxidase subunit III-like
SCOP superfamily Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
SCOP superfamily Mitochondrial cytochrome c oxidase subunit VIIa
SCOP superfamily ABC transporter involved in vitamin B12 uptake, BtuC
SCOP superfamily Fumarate reductase respiratory complex transmembrane subunits
SCOP superfamily Transmembrane di-heme cytochromes
SCOP superfamily Gated mechanosensitive channel
SCOP superfamily Small-conductance potassium channel
SCOP superfamily Rad50 coiled-coil Zn hook
SCOP superfamily Chemotaxis phosphatase CheZ
SCOP superfamily Siroheme synthase middle domains-like
SCOP superfamily Archaeal IMP cyclohydrolase PurO
SCOP superfamily VSV matrix protein
SCOP superfamily DsrEFH-like
SCOP superfamily Major surface antigen p30, SAG1
SCOP superfamily TolA/TonB C-terminal domain
SCOP superfamily C-terminal domain of PLC-beta
SCOP superfamily Eea1 homodimerisation domain
SCOP superfamily OMPT-like
SCOP superfamily MTH1598-like
SCOP superfamily DsrC, the gamma subunit of dissimilatory sulfite reductase
SCOP superfamily Transcription factor NusA, N-terminal domain
SCOP superfamily Type III secretory system chaperone-like
SCOP superfamily Cell wall binding repeat
SCOP superfamily Phage fibre proteins
SCOP superfamily Phage tail proteins
SCOP superfamily Integrin domains
SCOP superfamily Anti-sigma factor AsiA
SCOP superfamily Hypothetical protein YjbJ
SCOP superfamily Bcr-Abl oncoprotein oligomerization domain
SCOP superfamily RecG, N-terminal domain
SCOP superfamily FAT domain of focal adhesion kinase
SCOP superfamily F1 ATPase inhibitor, IF1, C-terminal domain
SCOP superfamily Intermediate filament protein, coiled coil region
SCOP superfamily Phase 1 flagellin
SCOP superfamily YopH tyrosine phosphatase N-terminal domain
SCOP superfamily Cell-division protein ZipA, C-terminal domain
SCOP superfamily Chorismate lyase-like
SCOP superfamily Ribonuclease domain of colicin E3
SCOP superfamily Sortase
SCOP superfamily SAND domain-like
SCOP superfamily Outer surface protein C (OspC)
SCOP superfamily Frizzled cysteine-rich domain
SCOP superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain
SCOP superfamily Variant surface glycoprotein (N-terminal domain)
SCOP superfamily Virus ectodomain
SCOP superfamily Influenza hemagglutinin (stalk)
SCOP superfamily N-terminal coiled coil domain from apc
SCOP superfamily Outer membrane lipoprotein
SCOP superfamily Delta-sleep-inducing peptide immunoreactive peptide
SCOP superfamily Coiled-coil dimerization domain from cortexillin I
SCOP superfamily Fibrinogen coiled-coil and central regions
SCOP superfamily Chicken cartilage matrix protein
SCOP superfamily Inhibitor of apoptosis (IAP) repeat
SCOP superfamily Zn-binding domains of ADDBP
SCOP superfamily Metallothionein
SCOP superfamily Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
SCOP superfamily Hypothetical protein MTH1184
SCOP superfamily Zn2/Cys6 DNA-binding domain
SCOP superfamily Invertebrate chitin-binding proteins
SCOP superfamily Type X cellulose binding domain, CBDX
SCOP superfamily FnI-like domain
SCOP superfamily TNF receptor-like
SCOP superfamily TB module/8-cys domain
SCOP superfamily Cystine-knot cytokines
SCOP superfamily Trefoil
SCOP superfamily Kringle-like
SCOP superfamily LDL receptor-like module
SCOP superfamily Snake toxin-like
SCOP superfamily Amb V allergen
SCOP superfamily Bowman-Birk inhibitor, BBI
SCOP superfamily Cellulose-binding domain
SCOP superfamily omega toxin-like
SCOP superfamily Neurotoxin B-IV
SCOP superfamily Anthrax protective antigen
SCOP superfamily Viral glycoprotein, central and dimerisation domains
SCOP superfamily Outer membrane efflux proteins (OEP)
SCOP superfamily Porins
SCOP superfamily Bcl-2 inhibitors of programmed cell death
SCOP superfamily delta-Endotoxin (insectocide), N-terminal domain
SCOP superfamily Diphtheria toxin, middle domain
SCOP superfamily Colicin
SCOP superfamily Reovirus inner layer core protein p3
SCOP superfamily Major capsid protein gp5
SCOP superfamily Penicillin binding protein dimerisation domain
SCOP superfamily gp120 core
SCOP superfamily Fibrinogen C-terminal domain-like
SCOP superfamily A heparin-binding domain
SCOP superfamily SRCR-like
SCOP superfamily Ribosome inactivating proteins (RIP)
SCOP superfamily SMAD MH1 domain
SCOP superfamily Pyruvoyl-dependent histidine and arginine decarboxylases
SCOP superfamily Phoshotransferase/anion transport protein
SCOP superfamily CytB endotoxin-like
SCOP superfamily RNA bacteriophage capsid protein
SCOP superfamily tRNA-intron endonuclease N-terminal domain-like
SCOP superfamily C-terminal domain of arginine repressor
SCOP superfamily Nucleotide cyclase
SCOP superfamily Allophycocyanin linker chain (domain)
SCOP superfamily Pili subunits
SCOP superfamily Interleukin 8-like chemokines
SCOP superfamily His-Me finger endonucleases
SCOP superfamily Microbial ribonucleases
SCOP superfamily PTS system fructose IIA component-like
SCOP superfamily Methylesterase CheB, C-terminal domain
SCOP superfamily PTS IIb component
SCOP superfamily Glycosyl hydrolases family 6, cellulases
SCOP superfamily Cobalamin (vitamin B12)-dependent enzymes
SCOP superfamily Bacterial luciferase-like
SCOP superfamily RuBisCo, C-terminal domain
SCOP superfamily Cyanovirin-N
SCOP superfamily Hedgehog/intein (Hint) domain
SCOP superfamily An insect antifreeze protein
SCOP superfamily beta-Roll
SCOP superfamily delta-Endotoxin (insectocide), middle domain
SCOP superfamily Bacteriochlorophyll A protein
SCOP superfamily TolB, C-terminal domain
SCOP superfamily Hemopexin-like domain
SCOP superfamily Avidin/streptavidin
SCOP superfamily XRCC4, N-terminal domain
SCOP superfamily Cytokine
SCOP superfamily Myosin S1 fragment, N-terminal domain
SCOP superfamily Spermadhesin, CUB domain
SCOP superfamily Virus attachment protein globular domain
SCOP superfamily Group II dsDNA viruses VP
SCOP superfamily PHM/PNGase F
SCOP superfamily gamma-Crystallin-like
SCOP superfamily Neurophysin II
SCOP superfamily Rab geranylgeranyltransferase alpha-subunit, insert domain
SCOP superfamily Aromatic compound dioxygenase
SCOP superfamily Cna protein B-type domain
SCOP superfamily VHL
SCOP superfamily Superoxide reductase-like
SCOP superfamily CBD9-like
SCOP superfamily Immunoglobulin
SCOP superfamily Moesin tail domain
SCOP superfamily Fe-only hydrogenase smaller subunit
SCOP superfamily Transducin (heterotrimeric G protein), gamma chain
SCOP superfamily Methanol dehydrogenase subunit
SCOP superfamily Tetraspanin
SCOP superfamily Serum albumin-like
SCOP superfamily Nuclear receptor ligand-binding domain
SCOP superfamily Cytochrome c oxidase subunit E
SCOP superfamily Bacterial muramidases
SCOP superfamily Lipovitellin-phosvitin complex, superhelical domain
SCOP superfamily Ras GEF
SCOP superfamily Chondroitin AC/alginate lyase
SCOP superfamily Transcription factor STAT-4 N-domain
SCOP superfamily Methyl-coenzyme M reductase alpha and beta chain C-terminal domain
SCOP superfamily Hemocyanin, N-terminal domain
SCOP superfamily FliG
SCOP superfamily DEATH domain
SCOP superfamily Wiscott-Aldrich syndrome protein, WASP, C-terminal domain
SCOP superfamily Bacteriocin AS-48
SCOP superfamily Apolipophorin-III
SCOP superfamily Retroviral matrix proteins
SCOP superfamily Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
SCOP superfamily C-terminal domain of RNA polymerase alpha subunit
SCOP superfamily Domain of early E2A DNA-binding protein, ADDBP
SCOP superfamily p53 tetramerization domain
SCOP superfamily Anaphylotoxins (complement system)
SCOP superfamily C-terminal domain of B transposition protein
SCOP superfamily STAT
SCOP superfamily Methionine synthase domain
SCOP superfamily Insect pheromone/odorant-binding proteins
SCOP superfamily Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
SCOP superfamily ROP protein
SCOP superfamily 4-helical cytokines
SCOP superfamily Bacterial GAP domain
SCOP superfamily alpha-catenin/vinculin-like
SCOP superfamily Proteasome activator
SCOP superfamily TMV-like viral coat proteins
SCOP superfamily Cytochromes
SCOP superfamily Aspartate receptor, ligand-binding domain
SCOP superfamily Methane monooxygenase hydrolase, gamma subunit
SCOP superfamily Diol dehydratase, gamma subunit
SCOP superfamily Fertilization protein
SCOP superfamily T4 endonuclease V
SCOP superfamily Bacterial immunoglobulin/albumin-binding domains
SCOP superfamily Smac/diablo
SCOP superfamily Enzyme IIa from lactose specific PTS, IIa-lac
SCOP superfamily Spectrin repeat
SCOP superfamily Epsilon subunit of F1F0-ATP synthase C-terminal domain
SCOP superfamily HR1 repeat
SCOP superfamily DNA polymerase III theta subunit-like
SCOP superfamily PspA lactotransferrin-binding region
SCOP superfamily RILP dimerisation region
SCOP superfamily T-antigen specific domain-like
SCOP superfamily YfgJ-like
SCOP superfamily MetI-like
SCOP superfamily MgtE membrane domain-like
SCOP superfamily SNF-like
SCOP superfamily PsbZ-like
SCOP superfamily Cytochrome b559 subunits
SCOP superfamily CV3147-like
SCOP superfamily MalF N-terminal region-like
SCOP superfamily PH0156-like
SCOP superfamily VPA0735-like
SCOP superfamily Jann2411-like
SCOP superfamily gpW/gp25-like
SCOP superfamily BTG domain-like
SCOP superfamily SMI1/KNR4-like
SCOP superfamily BLRF2-like
SCOP superfamily FlaG-like
SCOP superfamily NRDP1 C-terminal domain-like
SCOP superfamily YgaC/TfoX-N like
SCOP superfamily YdgH-like
SCOP superfamily Cgl1923-like
SCOP superfamily SO1590-like
SCOP superfamily HIN-2000 domain-like
SCOP superfamily EutN/CcmL-like
SCOP superfamily YopX-like
SCOP superfamily WSSV envelope protein-like
SCOP superfamily Smr-associated domain-like
SCOP superfamily NEAT domain-like
SCOP superfamily Lipase chaperone-like
SCOP superfamily PMT central region-like
SCOP superfamily MgtE N-terminal domain-like
SCOP superfamily SMc04008-like
SCOP superfamily HP0242-like
SCOP superfamily TerB-like
SCOP superfamily Sama2622-like
SCOP superfamily RPA2825-like
SCOP superfamily TAFH domain-like
SCOP superfamily FLJ32549 domain-like
SCOP superfamily PG0775 C-terminal domain-like
SCOP superfamily DsbB-like
SCOP superfamily Ta0600-like
SCOP superfamily SO2669-like
SCOP superfamily HP0062-like
SCOP superfamily Sec2 N-terminal region
SCOP superfamily MPN010-like
SCOP superfamily Vanabin-like
SCOP superfamily ImpE-like
SCOP superfamily Peptidoglycan deacetylase N-terminal noncatalytic region
SCOP superfamily CofE-like
SCOP superfamily XisI-like
SCOP superfamily Phage tail protein-like
SCOP superfamily YeeU-like
SCOP superfamily ApbE-like
SCOP superfamily SARS receptor-binding domain-like
SCOP superfamily FwdE-like
SCOP superfamily Prenyltransferase-like
SCOP superfamily TM1622-like
SCOP superfamily Transposase IS200-like
SCOP superfamily DOPA-like
SCOP superfamily Nqo5-like
SCOP superfamily TTHA1013/TTHA0281-like
SCOP superfamily PhtA domain-like
SCOP superfamily CAC2185-like
SCOP superfamily CinA-like
SCOP superfamily LD-carboxypeptidase A C-terminal domain-like
SCOP superfamily EAL domain-like
SCOP superfamily MFPT repeat-like
SCOP superfamily FimD N-terminal domain-like
SCOP superfamily PilZ domain-like
SCOP superfamily Agglutinin HPA-like
SCOP superfamily ICP-like
SCOP superfamily Hermes dimerisation domain
SCOP superfamily Duffy binding domain-like
SCOP superfamily PriB N-terminal domain-like
SCOP superfamily TROVE domain-like
SCOP superfamily USP8 N-terminal domain-like
SCOP superfamily RUN domain-like
SCOP superfamily AF0941-like
SCOP superfamily IpaD-like
SCOP superfamily Hyaluronidase post-catalytic domain-like
SCOP superfamily MukF C-terminal domain-like
SCOP superfamily LemA-like
SCOP superfamily PE/PPE dimer-like
SCOP superfamily EsxAB dimer-like
SCOP superfamily MW0975(SA0943)-like
SCOP superfamily YppE-like
SCOP superfamily Rabenosyn-5 Rab-binding domain-like
SCOP superfamily SPy1572-like
SCOP superfamily Variant surface glycoprotein MITAT 1.2, VSG 221, C-terminal domain
SCOP superfamily Connexin43
SCOP superfamily Proton glutamate symport protein
SCOP superfamily Viral ssDNA binding protein
SCOP superfamily YehU-like
SCOP superfamily WWE domain
SCOP superfamily GTF2I-like repeat
SCOP superfamily Hypothetical protein MPN330
SCOP superfamily RNA-binding protein She2p
SCOP superfamily XseB-like
SCOP superfamily DNA methylase specificity domain
SCOP superfamily TrkA C-terminal domain-like
SCOP superfamily Fzo-like conserved region
SCOP superfamily Coronavirus S2 glycoprotein
SCOP superfamily Geminin coiled-coil domain
SCOP superfamily YAP1 redox domain
SCOP superfamily Pollen allergen ole e 6
SCOP superfamily OmpH-like
SCOP superfamily Rap/Ran-GAP
SCOP superfamily CbiD-like
SCOP superfamily Recombination protein RecR
SCOP superfamily Hypothetical protein PF0899
SCOP superfamily TTHA0583/YokD-like
SCOP superfamily Coronavirus RNA-binding domain
SCOP superfamily DR1885-like metal-binding protein
SCOP superfamily GDNF receptor-like
SCOP superfamily Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain
SCOP superfamily I/LWEQ domain
SCOP superfamily A middle domain of Talin 1
SCOP superfamily CAPPD, an extracellular domain of amyloid beta A4 protein
SCOP superfamily Bacteriocin immunity protein-like
SCOP superfamily Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain
SCOP superfamily PhoU-like
SCOP superfamily HBS1-like domain
SCOP superfamily KorB DNA-binding domain-like
SCOP superfamily DnaK suppressor protein DksA, alpha-hairpin domain
SCOP superfamily G protein-binding domain
SCOP superfamily TSP type-3 repeat
SCOP superfamily Plexin repeat
SCOP superfamily Autotransporter
SCOP superfamily Respiratory nitrate reductase 1 gamma chain
SCOP superfamily Oligosaccharyltransferase subunit ost4p
SCOP superfamily Major capsid protein VP5
SCOP superfamily Antivirulence factor
SCOP superfamily 2-methylcitrate dehydratase PrpD
SCOP superfamily Roadblock/LC7 domain
SCOP superfamily Sensory domain-like
SCOP superfamily CheC-like
SCOP superfamily Hypothetical protein YwqG
SCOP superfamily Chromosomal protein MC1
SCOP superfamily Colicin D/E5 nuclease domain
SCOP superfamily Bacterial fluorinating enzyme, N-terminal domain
SCOP superfamily Creatininase
SCOP superfamily Adhesin YadA, collagen-binding domain
SCOP superfamily Sema domain
SCOP superfamily Replicase NSP9
SCOP superfamily Hypothetical protein YgiW
SCOP superfamily Hydrophobin II, HfbII
SCOP superfamily Smp-1-like
SCOP superfamily Stathmin
SCOP superfamily Hypothetical protein ST1625
SCOP superfamily P40 nucleoprotein
SCOP superfamily Hypothetical protein MTH393
SCOP superfamily YgfB-like
SCOP superfamily GRIP domain
SCOP superfamily Flavivirus capsid protein C
SCOP superfamily Docking domain A of the erythromycin polyketide synthase (DEBS)
SCOP superfamily Flagellar export chaperone FliS
SCOP superfamily Staphylocoagulase
SCOP superfamily Typo IV secretion system protein TraC
SCOP superfamily IP3 receptor type 1 binding core, domain 2

Jump to [ Top of page · Assignment statistics ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.