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  Home > Genomes > Superfamily assignments for Aspergillus niger ATCC 1015


Aspergillus niger ATCC 1015 superfamily assignments

Taxonomy
Taxonomy browser entry

Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus niger; Aspergillus niger ATCC 1015

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Fasta format sequences
Domain assignments

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Assignment statistics

Sequences: 8592 total
5367 (62 %) with assignment
487 average length
44 % amino acid coverage
Domains: 7734 total
737 unique superfamilies
521 unique families
342 average length
10.5 average superfamily size
90 % formed by duplication
Domain combinations: 521 domain pairs
1709 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies
458 437 61 8 SCOP 51735 NAD(P)-binding Rossmann-fold domains
420 403 10 0 SCOP 103473 MFS general substrate transporter
399 310 100 10 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
258 254 24 9 SCOP 53474 alpha/beta-Hydrolases
213 213 7 0 SCOP 57701 Zn2/Cys6 DNA-binding domain
212 187 29 3 SCOP 51905 FAD/NAD(P)-binding domain
160 159 24 2 SCOP 56112 Protein kinase-like (PK-like)
143 143 26 7 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
135 135 9 1 SCOP 48264 Cytochrome P450
109 93 38 10 SCOP 48371 ARM repeat
109 101 36 1 SCOP 50978 WD40 repeat-like
109 27 24 1 SCOP 52777 CoA-dependent acyltransferases
97 59 30 1 SCOP 48452 TPR-like
94 62 43 0 SCOP 47336 ACP-like
93 93 12 1 SCOP 50129 GroES-like
88 66 30 1 SCOP 56801 Acetyl-CoA synthetase-like
83 74 25 1 SCOP 48403 Ankyrin repeat
82 82 29 8 SCOP 51445 (Trans)glycosidases
77 77 14 2 SCOP 54373 FAD-linked reductases, C-terminal domain
68 68 9 3 SCOP 51197 Clavaminate synthase-like
62 34 13 4 SCOP 53067 Actin-like ATPase domain
58 44 20 1 SCOP 54928 RNA-binding domain, RBD
56 54 16 3 SCOP 52833 Thioredoxin-like
56 53 22 1 SCOP 46785 "Winged helix" DNA-binding domain
53 49 23 1 SCOP 57850 RING/U-box
53 42 14 0 SCOP 57667 beta-beta-alpha zinc fingers
52 48 31 1 SCOP 52151 FabD/lysophospholipase-like
52 42 27 1 SCOP 53901 Thiolase-like
51 51 5 4 SCOP 53383 PLP-dependent transferases
50 50 20 0 SCOP 81383 F-box domain
46 30 23 4 SCOP 50249 Nucleic acid-binding proteins
46 46 13 3 SCOP 56784 HAD-like
43 41 12 2 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
43 43 6 2 SCOP 56176 FAD-binding/transporter-associated domain-like
42 23 7 0 SCOP 90123 ABC transporter transmembrane region
41 14 6 1 SCOP 49503 Cupredoxins
40 40 11 9 SCOP 51556 Metallo-dependent hydrolases
36 36 8 4 SCOP 48208 Six-hairpin glycosidases
35 35 7 2 SCOP 53448 Nucleotide-diphospho-sugar transferases
35 33 10 1 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
34 34 10 5 SCOP 54001 Cysteine proteinases
31 30 9 1 SCOP 53167 Purine and uridine phosphorylases
31 29 5 3 SCOP 51126 Pectin lyase-like
30 30 4 8 SCOP 51182 RmlC-like cupins
30 30 16 0 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
29 22 9 1 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
29 28 11 1 SCOP 52047 RNI-like
28 28 4 1 SCOP 51395 FMN-linked oxidoreductases
28 27 19 1 SCOP 50729 PH domain-like
27 27 6 3 SCOP 54427 NTF2-like
27 22 11 4 SCOP 49785 Galactose-binding domain-like
27 27 20 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
26 24 7 3 SCOP 56281 Metallo-hydrolase/oxidoreductase
26 26 3 1 SCOP 51430 NAD(P)-linked oxidoreductase
25 25 8 3 SCOP 56300 Metallo-dependent phosphatases
25 21 10 1 SCOP 46689 Homeodomain-like
25 25 5 1 SCOP 103506 Mitochondrial carrier
25 24 15 1 SCOP 63380 Riboflavin synthase domain-like
24 14 8 6 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
23 23 4 2 SCOP 53720 ALDH-like
23 23 8 2 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
23 23 7 2 SCOP 49899 Concanavalin A-like lectins/glucanases
23 23 7 1 SCOP 47616 GST C-terminal domain-like
22 22 6 2 SCOP 53254 Phosphoglycerate mutase-like
22 18 12 0 SCOP 57903 FYVE/PHD zinc finger
22 11 4 1 SCOP 47923 Ypt/Rab-GAP domain of gyp1p
21 21 9 1 SCOP 54495 UBC-like
21 19 13 1 SCOP 47473 EF-hand
21 12 10 0 SCOP 52113 BRCT domain
20 19 10 2 SCOP 53098 Ribonuclease H-like
20 20 7 3 SCOP 53187 Zn-dependent exopeptidases
20 20 4 0 SCOP 54909 Dimeric alpha+beta barrel
20 20 18 1 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
19 19 2 1 SCOP 48576 Terpenoid synthases
19 18 10 0 SCOP 50044 SH3-domain
19 19 6 2 SCOP 51011 Glycosyl hydrolase domain
19 7 7 0 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
18 16 13 2 SCOP 56059 Glutathione synthetase ATP-binding domain-like
18 18 7 4 SCOP 51569 Aldolase
18 18 11 3 SCOP 52317 Class I glutamine amidotransferase-like
18 18 15 2 SCOP 55681 Class II aaRS and biotin synthetases
18 17 12 0 SCOP 54236 Ubiquitin-like
18 14 6 1 SCOP 51338 Composite domain of metallo-dependent hydrolases
18 5 5 1 SCOP 63411 LuxS/MPP-like metallohydrolase
18 18 8 1 SCOP 82199 SET domain
18 17 6 0 SCOP 81653 Calcium ATPase, transduction domain A
17 9 8 0 SCOP 54106 LysM domain
17 17 6 0 SCOP 81665 Calcium ATPase, transmembrane domain M
16 16 4 1 SCOP 75304 Amidase signature (AS) enzymes
16 15 11 3 SCOP 52374 Nucleotidylyl transferase
16 16 7 3 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
16 13 6 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
15 11 7 1 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
15 15 13 4 SCOP 54211 Ribosomal protein S5 domain 2-like
15 15 5 2 SCOP 50475 FMN-binding split barrel
15 14 12 2 SCOP 50447 Translation proteins
15 14 9 0 SCOP 82171 DPP6 N-terminal domain-like
15 15 2 2 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
15 9 6 1 SCOP 47954 Cyclin-like
14 14 6 1 SCOP 55811 Nudix
14 11 4 3 SCOP 52096 ClpP/crotonase
14 13 3 1 SCOP 55298 YjgF-like
14 13 5 1 SCOP 47113 Histone-fold
14 14 4 2 SCOP 53649 Alkaline phosphatase-like
14 14 10 0 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
14 14 8 0 SCOP 46565 Chaperone J-domain
14 14 3 1 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
14 8 8 0 SCOP 49562 C2 domain (Calcium/lipid-binding domain, CaLB)
14 14 2 0 SCOP 57959 Leucine zipper domain
13 13 8 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
13 8 5 2 SCOP 48239 Terpenoid cyclases/Protein prenyltransferases
13 13 7 0 SCOP 55856 Cytochrome b5-like heme/steroid binding domain
13 10 8 1 SCOP 52058 L domain-like
13 13 12 0 SCOP 52172 CheY-like
13 13 4 1 SCOP 49482 Aromatic compound dioxygenase
12 12 6 1 SCOP 51695 PLC-like phosphodiesterases
12 12 10 2 SCOP 52402 Adenine nucleotide alpha hydrolases-like
12 12 2 1 SCOP 51316 Mss4-like
12 12 6 3 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
12 12 5 1 SCOP 50182 Sm-like ribonucleoproteins
12 12 4 1 SCOP 52499 Isochorismatase-like hydrolases
12 11 5 2 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
12 12 6 4 SCOP 52467 DHS-like NAD/FAD-binding domain
12 7 3 1 SCOP 89796 CoA-transferase family III (CaiB/BaiF)
12 7 7 0 SCOP 55785 PYP-like sensor domain (PAS domain)
12 12 11 0 SCOP 47384 Homodimeric domain of signal transducing histidine kinase
12 10 9 1 SCOP 52440 PreATP-grasp domain
12 12 5 0 SCOP 52279 Beta-D-glucan exohydrolase, C-terminal domain
12 12 2 0 SCOP 55031 Bacterial exopeptidase dimerisation domain
11 11 2 3 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
11 10 7 3 SCOP 52799 (Phosphotyrosine protein) phosphatases II
11 8 3 2 SCOP 54506 Diaminopimelate epimerase-like
11 11 3 1 SCOP 56529 FAH
10 10 4 0 SCOP 63829 Calcium-dependent phosphotriesterase
10 10 7 2 SCOP 64356 SNARE-like
10 10 8 3 SCOP 56672 DNA/RNA polymerases
10 10 8 0 SCOP 81296 E set domains
10 9 6 1 SCOP 50891 Cyclophilin-like
10 10 3 1 SCOP 52266 SGNH hydrolase
10 9 5 0 SCOP 54695 POZ domain
10 5 5 1 SCOP 56024 Phospholipase D/nuclease
10 9 4 2 SCOP 47203 Acyl-CoA dehydrogenase C-terminal domain-like
10 10 7 2 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
10 10 9 2 SCOP 48350 GTPase activation domain, GAP
9 9 8 0 SCOP 103657 BAR/IMD domain-like
9 9 9 1 SCOP 52218 Flavoproteins
9 7 5 0 SCOP 52821 Rhodanese/Cell cycle control phosphatase
9 9 2 2 SCOP 109604 HD-domain/PDEase-like
9 9 2 1 SCOP 56317 Carbon-nitrogen hydrolase
9 9 4 2 SCOP 88713 Glycoside hydrolase/deacetylase
9 3 3 0 SCOP 55008 HMA, heavy metal-associated domain
9 9 2 0 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
9 9 5 1 SCOP 56601 beta-lactamase/transpeptidase-like
9 9 3 1 SCOP 52016 LeuD/IlvD-like
9 6 5 0 SCOP 81901 HCP-like
9 9 8 1 SCOP 53300 vWA-like
9 9 4 2 SCOP 56645 Acyl-CoA dehydrogenase NM domain-like
9 9 3 1 SCOP 75005 Arabinanase/levansucrase/invertase
9 9 4 1 SCOP 52743 Subtilisin-like
9 6 6 0 SCOP 90229 CCCH zinc finger
9 7 7 1 SCOP 47370 Bromodomain
8 7 5 2 SCOP 54197 HIT-like
8 8 6 1 SCOP 55920 Creatinase/aminopeptidase
8 6 6 2 SCOP 100950 NagB/RpiA/CoA transferase-like
8 8 4 0 SCOP 51161 Trimeric LpxA-like enzymes
8 6 4 2 SCOP 55753 Actin depolymerizing proteins
8 8 4 1 SCOP 50630 Acid proteases
8 8 4 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
8 8 5 2 SCOP 74650 Galactose mutarotase-like
8 6 5 1 SCOP 54631 CBS-domain pair
8 3 2 0 SCOP 81324 Voltage-gated potassium channels
8 8 6 2 SCOP 81301 Nucleotidyltransferase
8 5 4 0 SCOP 69065 RNase III domain-like
8 8 4 2 SCOP 48019 post-AAA+ oligomerization domain-like
8 8 5 0 SCOP 144083 Magnesium transport protein CorA, transmembrane region
8 8 8 0 SCOP 46934 UBA-like
7 7 3 1 SCOP 51658 Xylose isomerase-like
7 7 2 0 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
7 6 4 0 SCOP 47095 HMG-box
7 7 5 1 SCOP 88723 PIN domain-like
7 6 5 1 SCOP 55781 GAF domain-like
7 7 4 0 SCOP 55961 Bet v1-like
7 7 5 0 SCOP 52954 Class II aaRS ABD-related
7 7 3 0 SCOP 69118 AhpD-like
7 3 3 1 SCOP 51206 cAMP-binding domain-like
7 7 5 1 SCOP 56219 DNase I-like
7 5 4 0 SCOP 82153 FAS1 domain
7 7 7 1 SCOP 88697 PUA domain-like
7 7 5 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
7 5 5 0 SCOP 51045 WW domain
7 7 4 1 SCOP 54556 Chitinase insertion domain
6 6 3 2 SCOP 55120 Pseudouridine synthase
6 6 3 2 SCOP 56796 Dehydroquinate synthase-like
6 6 2 1 SCOP 56634 Heme-dependent catalase-like
6 6 5 0 SCOP 57997 Tropomyosin
6 6 2 0 SCOP 49777 PEBP-like
6 6 6 1 SCOP 64268 PX domain
6 6 5 0 SCOP 50022 ISP domain
6 4 4 0 SCOP 55021 ACT-like
6 4 4 0 SCOP 89562 RraA-like
6 6 2 0 SCOP 102198 Putative cyclase
6 2 2 0 SCOP 50199 Staphylococcal nuclease
6 6 4 0 SCOP 143865 CorA soluble domain-like
6 3 3 0 SCOP 54980 EF-G C-terminal domain-like
6 5 5 0 SCOP 117281 Kelch motif
6 5 3 0 SCOP 50965 Galactose oxidase, central domain
6 6 6 1 SCOP 54768 dsRNA-binding domain-like
6 4 4 0 SCOP 54160 Chromo domain-like
6 4 3 1 SCOP 158702 Sec63 N-terminal domain-like
6 2 2 0 SCOP 81698 FF domain
5 5 3 2 SCOP 53613 Ribokinase-like
5 5 4 1 SCOP 81606 PP2C-like
5 5 3 2 SCOP 51366 Ribulose-phoshate binding barrel
5 5 4 1 SCOP 50104 Translation proteins SH3-like domain
5 5 2 1 SCOP 51730 FAD-linked oxidoreductase
5 5 2 2 SCOP 48557 L-aspartase-like
5 5 4 0 SCOP 54292 2Fe-2S ferredoxin-like
5 5 2 1 SCOP 56655 Carbohydrate phosphatase
5 5 4 0 SCOP 55315 L30e-like
5 5 3 0 SCOP 81321 Family A G protein-coupled receptor-like
5 5 2 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
5 5 3 2 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
5 5 2 0 SCOP 54897 Protease propeptides/inhibitors
5 5 3 2 SCOP 52768 Arginase/deacetylase
5 3 2 1 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
5 5 4 2 SCOP 55931 Glutamine synthetase/guanido kinase
5 5 4 0 SCOP 57783 Zinc beta-ribbon
5 5 5 0 SCOP 51230 Single hybrid motif
5 5 3 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
5 5 1 1 SCOP 53732 Aconitase iron-sulfur domain
5 5 4 1 SCOP 49879 SMAD/FHA domain
5 5 5 0 SCOP 69322 Tricorn protease domain 2
5 5 2 1 SCOP 51604 Enolase C-terminal domain-like
5 5 4 2 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
5 5 5 1 SCOP 51246 Rudiment single hybrid motif
5 5 4 1 SCOP 52922 TK C-terminal domain-like
5 5 5 0 SCOP 48334 DNA repair protein MutS, domain III
5 5 2 1 SCOP 54826 Enolase N-terminal domain-like
5 5 4 0 SCOP 47459 HLH, helix-loop-helix DNA-binding domain
5 5 4 1 SCOP 48366 Ras GEF
5 5 5 0 SCOP 48464 ENTH/VHS domain
5 3 2 0 SCOP 49303 beta-Galactosidase/glucuronidase domain
5 5 5 0 SCOP 57016 Plant lectins/antimicrobial peptides
5 3 2 0 SCOP 54416 Amine oxidase N-terminal region
4 4 2 1 SCOP 53271 PRTase-like
4 4 3 2 SCOP 53927 Cytidine deaminase-like
4 4 2 0 SCOP 111331 NAD kinase/diacylglycerol kinase-like
4 3 3 0 SCOP 56214 4'-phosphopantetheinyl transferase
4 4 4 1 SCOP 47240 Ferritin-like
4 4 2 1 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
4 4 3 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
4 4 3 0 SCOP 55821 YrdC/RibB
4 4 4 1 SCOP 48150 DNA-glycosylase
4 4 4 1 SCOP 102114 Radical SAM enzymes
4 4 3 1 SCOP 51419 PLP-binding barrel
4 4 3 0 SCOP 49764 HSP20-like chaperones
4 4 3 1 SCOP 50985 RCC1/BLIP-II
4 4 3 0 SCOP 58038 SNARE fusion complex
4 4 3 1 SCOP 56104 SAICAR synthase-like
4 4 2 1 SCOP 48256 Citrate synthase
4 4 1 1 SCOP 51726 UROD/MetE-like
4 4 4 1 SCOP 54534 FKBP-like
4 4 3 1 SCOP 48113 Heme-dependent peroxidases
4 4 4 1 SCOP 56399 ADP-ribosylation
4 4 4 1 SCOP 47576 Calponin-homology domain, CH-domain
4 4 2 0 SCOP 144091 Rhomboid-like
4 4 2 1 SCOP 51679 Bacterial luciferase-like
4 4 3 1 SCOP 56524 Oxidoreductase molybdopterin-binding domain
4 4 3 0 SCOP 64167 SurE-like
4 4 3 0 SCOP 110857 Gamma-glutamyl cyclotransferase-like
4 4 2 0 SCOP 161111 Cation efflux protein transmembrane domain-like
4 4 4 1 SCOP 50800 PK beta-barrel domain-like
4 4 1 1 SCOP 53213 LigB-like
4 4 2 1 SCOP 53933 Microbial ribonucleases
4 4 3 0 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
4 4 2 0 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
4 4 1 0 SCOP 48592 GroEL equatorial domain-like
4 4 3 0 SCOP 55103 FAD-linked oxidases, C-terminal domain
4 4 3 1 SCOP 49344 CBD9-like
4 1 1 0 SCOP 49313 Cadherin-like
4 4 3 1 SCOP 81995 beta-sandwich domain of Sec23/24
4 4 3 0 SCOP 51971 Nucleotide-binding domain
4 4 2 0 SCOP 48056 Di-copper centre-containing domain
4 4 2 1 SCOP 53623 MurD-like peptide ligases, catalytic domain
4 4 3 1 SCOP 48225 Seven-hairpin glycosidases
4 4 1 0 SCOP 52029 GroEL apical domain-like
4 4 3 1 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
4 4 3 0 SCOP 117289 Nucleoporin domain
4 4 2 0 SCOP 144232 HIT/MYND zinc finger-like
4 4 3 0 SCOP 46938 CRAL/TRIO N-terminal domain
4 4 2 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
4 4 2 1 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
4 4 1 1 SCOP 56542 Substrate-binding domain of HMG-CoA reductase
4 4 3 1 SCOP 52087 CRAL/TRIO domain
4 4 4 0 SCOP 158573 GINS helical bundle-like
4 4 4 0 SCOP 47769 SAM/Pointed domain
4 4 2 1 SCOP 56204 Hect, E3 ligase catalytic domain
4 3 2 0 SCOP 101690 PAZ domain
4 4 3 1 SCOP 48425 Sec7 domain
4 2 1 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
4 4 3 0 SCOP 75553 Smc hinge domain
4 4 1 0 SCOP 54849 GroEL-intermediate domain like
4 4 1 1 SCOP 55035 NAD-binding domain of HMG-CoA reductase
4 4 1 0 SCOP 117100 Beta-galactosidase LacA, domain 3
3 3 2 0 SCOP 57829 Zn-binding ribosomal proteins
3 3 3 2 SCOP 53697 SIS domain
3 3 3 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
3 3 2 0 SCOP 53597 Dihydrofolate reductase-like
3 3 3 1 SCOP 52980 Restriction endonuclease-like
3 3 3 1 SCOP 53850 Periplasmic binding protein-like II
3 3 3 1 SCOP 53633 Carbamate kinase-like
3 3 1 0 SCOP 102705 NIF3 (NGG1p interacting factor 3)-like
3 3 2 0 SCOP 52949 Macro domain-like
3 3 1 0 SCOP 144122 Tim10-like
3 3 1 1 SCOP 56815 Sec1/munc18-like (SM) proteins
3 3 2 0 SCOP 46579 Prefoldin
3 3 2 1 SCOP 56322 ADC synthase
3 3 2 1 SCOP 144000 Oxysterol-binding protein-like
3 3 1 0 SCOP 51306 LexA/Signal peptidase
3 3 2 0 SCOP 53639 AraD/HMP-PK domain-like
3 3 3 1 SCOP 111126 Ligand-binding domain in the NO signalling and Golgi transport
3 3 2 0 SCOP 47072 Cysteine alpha-hairpin motif
3 3 3 0 SCOP 53032 tRNA-intron endonuclease catalytic domain-like
3 3 1 1 SCOP 103378 2-methylcitrate dehydratase PrpD
3 3 3 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
3 3 3 1 SCOP 52335 Methylglyoxal synthase-like
3 3 2 1 SCOP 75011 3-carboxy-cis,cis-mucoante lactonizing enzyme
3 3 3 0 SCOP 160104 Acetoacetate decarboxylase-like
3 3 2 2 SCOP 49452 Starch-binding domain-like
3 3 3 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
3 1 1 0 SCOP 50156 PDZ domain-like
3 3 3 0 SCOP 47661 t-snare proteins
3 3 2 0 SCOP 52129 Caspase-like
3 3 3 0 SCOP 49265 Fibronectin type III
3 3 3 1 SCOP 55816 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
3 2 2 1 SCOP 52210 Succinyl-CoA synthetase domains
3 3 3 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
3 2 2 1 SCOP 56042 PurM C-terminal domain-like
3 3 2 0 SCOP 57863 ArfGap/RecO-like zinc finger
3 3 3 1 SCOP 54616 DNA-binding domain of Mlu1-box binding protein MBP1
3 2 2 1 SCOP 55326 PurM N-terminal domain-like
3 3 3 1 SCOP 81631 PAP/OAS1 substrate-binding domain
3 3 2 0 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
3 3 2 1 SCOP 49998 Amine oxidase catalytic domain
3 3 2 0 SCOP 48065 DBL homology domain (DH-domain)
3 3 3 0 SCOP 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
3 3 2 0 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
3 3 2 0 SCOP 63748 Tudor/PWWP/MBT
3 3 1 1 SCOP 143975 IlvD/EDD N-terminal domain-like
3 3 2 0 SCOP 74924 Cap-Gly domain
3 3 3 0 SCOP 49348 Clathrin adaptor appendage domain
3 3 3 0 SCOP 55271 DNA repair protein MutS, domain I
3 3 2 1 SCOP 81271 TGS-like
3 3 2 1 SCOP 101152 Mob1/phocein
3 3 1 0 SCOP 49417 p53-like transcription factors
3 3 1 0 SCOP 55455 SRF-like
3 3 3 0 SCOP 48097 Regulator of G-protein signaling, RGS
3 2 2 1 SCOP 109905 Surp module (SWAP domain)
3 3 2 1 SCOP 82754 C-terminal, gelsolin-like domain of Sec23/24
3 3 3 1 SCOP 49447 Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
3 3 2 1 SCOP 52025 PA domain
3 3 3 1 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
3 3 3 0 SCOP 140111 Endosomal sorting complex assembly domain
3 3 2 0 SCOP 47802 DNA polymerase beta, N-terminal domain-like
2 2 2 1 SCOP 81338 Aquaporin-like
2 2 1 1 SCOP 50193 Ribosomal protein L14
2 2 1 1 SCOP 56047 Ribosomal protein S8
2 1 1 1 SCOP 53784 Phosphofructokinase
2 2 2 0 SCOP 110324 Ribosomal L27 protein-like
2 2 1 1 SCOP 75620 Release factor
2 2 2 0 SCOP 55174 Alpha-L RNA-binding motif
2 2 2 0 SCOP 75217 alpha/beta knot
2 2 2 1 SCOP 51283 dUTPase-like
2 2 1 0 SCOP 89360 HesB-like domain
2 2 2 1 SCOP 51713 tRNA-guanine transglycosylase
2 2 2 1 SCOP 50715 Ribosomal protein L25-like
2 1 1 0 SCOP 64005 Undecaprenyl diphosphate synthase
2 1 1 1 SCOP 142695 RibA-like
2 2 2 1 SCOP 55205 EPT/RTPC-like
2 2 1 0 SCOP 82657 BolA-like
2 2 2 1 SCOP 55469 FMN-dependent nitroreductase-like
2 1 1 0 SCOP 110296 Oligoxyloglucan reducing end-specific cellobiohydrolase
2 2 2 1 SCOP 53590 Nucleoside hydrolase
2 2 2 1 SCOP 53328 Formyltransferase
2 2 2 1 SCOP 53774 Glutaminase/Asparaginase
2 2 2 1 SCOP 48439 Protein prenylyltransferase
2 2 2 2 SCOP 52972 ITPase-like
2 2 2 1 SCOP 49329 Cu,Zn superoxide dismutase-like
2 2 2 0 SCOP 81343 Fumarate reductase respiratory complex transmembrane subunits
2 2 1 1 SCOP 53056 beta-carbonic anhydrase, cab
2 2 2 1 SCOP 55257 RBP11-like subunits of RNA polymerase
2 2 2 1 SCOP 64153 YjeF N-terminal domain-like
2 2 2 0 SCOP 55159 eIF1-like
2 2 2 0 SCOP 55418 eIF4e-like
2 2 1 0 SCOP 161084 MAPEG domain-like
2 2 2 1 SCOP 102405 MCP/YpsA-like
2 1 1 0 SCOP 50494 Trypsin-like serine proteases
2 2 2 1 SCOP 111352 Ammonium transporter
2 2 1 0 SCOP 46767 Methylated DNA-protein cysteine methyltransferase, C-terminal domain
2 2 1 0 SCOP 81340 Clc chloride channel
2 2 1 0 SCOP 109854 DinB/YfiT-like putative metalloenzymes
2 2 2 1 SCOP 48173 Cryptochrome/photolyase FAD-binding domain
2 2 2 0 SCOP 52425 Cryptochrome/photolyase, N-terminal domain
2 2 2 0 SCOP 51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
2 2 2 0 SCOP 89095 GatB/YqeY motif
2 2 2 1 SCOP 103025 Folate-binding domain
2 2 1 0 SCOP 50814 Lipocalins
2 2 2 0 SCOP 47781 RuvA domain 2-like
2 2 1 0 SCOP 50939 Sialidases
2 2 2 2 SCOP 100939 SPOC domain-like
2 2 1 0 SCOP 111321 AF1104-like
2 2 2 0 SCOP 55186 ThrRS/AlaRS common domain
2 2 2 1 SCOP 52490 Tubulin nucleotide-binding domain-like
2 2 2 0 SCOP 53092 Creatinase/prolidase N-terminal domain
2 2 1 1 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
2 2 1 1 SCOP 56003 Molybdenum cofactor-binding domain
2 2 2 0 SCOP 46589 tRNA-binding arm
2 1 1 1 SCOP 55979 DNA clamp
2 2 1 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
2 2 2 0 SCOP 160443 SMR domain-like
2 2 1 0 SCOP 160991 CV3147-like
2 2 2 0 SCOP 63825 YWTD domain
2 2 1 0 SCOP 48230 Chondroitin AC/alginate lyase
2 2 2 0 SCOP 118116 DNA mismatch repair protein MutL
2 2 2 0 SCOP 160059 PriA/YqbF domain
2 2 1 0 SCOP 56436 C-type lectin-like
2 2 2 0 SCOP 57884 Ada DNA repair protein, N-terminal domain (N-Ada 10)
2 1 1 0 SCOP 141086 Agglutinin HPA-like
2 1 1 0 SCOP 46966 Spectrin repeat
2 2 1 0 SCOP 143968 UbiD C-terminal domain-like
2 2 1 0 SCOP 81585 PsbU/PolX domain-like
2 2 1 1 SCOP 54665 CO dehydrogenase molybdoprotein N-domain-like
2 2 2 0 SCOP 68906 SAP domain
2 2 2 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
2 2 1 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
2 2 1 0 SCOP 55447 CO dehydrogenase flavoprotein C-terminal domain-like
2 2 2 0 SCOP 90002 Hypothetical protein YjiA, C-terminal domain
2 2 1 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
2 2 1 1 SCOP 56327 LDH C-terminal domain-like
2 1 1 0 SCOP 56053 Ribosomal protein L6
2 2 1 1 SCOP 47741 CO dehydrogenase ISP C-domain like
2 2 2 0 SCOP 117892 Band 7/SPFH domain
2 1 1 0 SCOP 118310 AN1-like Zinc finger
2 2 2 0 SCOP 55545 beta-N-acetylhexosaminidase-like domain
2 1 1 0 SCOP 82693 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
2 2 2 0 SCOP 144284 Sec2 N-terminal region
2 2 2 0 SCOP 82708 R3H domain
2 2 2 2 SCOP 74788 Cullin repeat-like
2 2 2 0 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
2 2 2 0 SCOP 46774 ARID-like
2 2 2 0 SCOP 47396 Transcription factor IIA (TFIIA), alpha-helical domain
2 2 2 1 SCOP 109993 VPS9 domain
2 2 2 0 SCOP 57889 Cysteine-rich domain
2 1 1 0 SCOP 57924 Inhibitor of apoptosis (IAP) repeat
2 2 1 1 SCOP 140984 PTPA-like
2 2 2 0 SCOP 116846 MIT domain
2 2 1 0 SCOP 47672 Transferrin receptor-like dimerisation domain
2 2 2 0 SCOP 57756 Retrovirus zinc finger-like domains
2 2 2 0 SCOP 50911 Mannose 6-phosphate receptor domain
2 2 2 1 SCOP 101233 PWI domain
2 2 1 1 SCOP 117018 ATP-dependent DNA ligase DNA-binding domain
2 2 1 0 SCOP 47571 Cloroperoxidase
2 2 1 0 SCOP 55666 Ribonuclease PH domain 2-like
2 2 1 0 SCOP 103243 KA1-like
2 2 2 0 SCOP 143885 RGC domain-like
2 2 2 0 SCOP 50784 Transcription factor IIA (TFIIA), beta-barrel domain
2 1 1 1 SCOP 50886 D-aminopeptidase, middle and C-terminal domains
2 2 1 0 SCOP 69848 LCCL domain
2 1 1 0 SCOP 82615 Polo-box domain
2 1 1 0 SCOP 49758 Calpain large subunit, middle domain (domain III)
2 2 2 0 SCOP 89009 GAT-like domain
2 2 1 0 SCOP 81811 Helical domain of Sec23/24
2 2 1 0 SCOP 63433 Fumarylacetoacetate hydrolase, FAH, N-terminal domain
2 2 1 0 SCOP 101821 Aminopeptidase/glucanase lid domain
2 2 1 1 SCOP 82919 Zn-finger domain of Sec23/24
2 2 2 0 SCOP 53150 DNA repair protein MutS, domain II
2 2 2 0 SCOP 158230 PRP4-like
1 1 1 1 SCOP 53790 Tetrapyrrole methylase
1 1 1 0 SCOP 46911 Ribosomal protein S18
1 1 1 1 SCOP 52141 Uracil-DNA glycosylase-like
1 1 1 1 SCOP 52166 Ribosomal protein L4
1 1 1 0 SCOP 54570 Ribosomal protein S19
1 1 1 0 SCOP 54843 Ribosomal protein L22
1 1 1 0 SCOP 54686 Ribosomal protein L16p/L10e
1 1 1 0 SCOP 53137 Translational machinery components
1 1 1 0 SCOP 52080 Ribosomal proteins L15p and L18e
1 1 1 1 SCOP 103491 Preprotein translocase SecY subunit
1 1 1 0 SCOP 46946 S13-like H2TH domain
1 1 1 1 SCOP 64263 Prokaryotic ribosomal protein L17
1 1 1 0 SCOP 64182 DHH phosphoesterases
1 1 1 1 SCOP 55831 Thymidylate synthase/dCMP hydroxymethylase
1 1 1 0 SCOP 141091 L21p-like
1 1 1 0 SCOP 143800 L28p-like
1 1 1 1 SCOP 75625 YebC-like
1 1 1 0 SCOP 160369 Ribosomal protein L10-like
1 1 1 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
1 1 1 0 SCOP 81333 F1F0 ATP synthase subunit C
1 1 1 1 SCOP 55068 Peptide methionine sulfoxide reductase
1 1 1 0 SCOP 52161 Ribosomal protein L13
1 1 1 0 SCOP 47060 S15/NS1 RNA-binding domain
1 1 1 1 SCOP 51351 Triosephosphate isomerase (TIM)
1 1 1 0 SCOP 55194 Ribosome recycling factor, RRF
1 1 1 0 SCOP 54565 Ribosomal protein S16
1 1 1 1 SCOP 103263 Chorismate synthase, AroC
1 1 1 0 SCOP 54862 4Fe-4S ferredoxins
1 1 1 1 SCOP 111337 QueA-like
1 1 1 1 SCOP 56770 HydA/Nqo6-like
1 1 1 1 SCOP 52313 Ribosomal protein S2
1 1 1 0 SCOP 54285 MoaD/ThiS
1 1 1 0 SCOP 56935 Porins
1 1 1 1 SCOP 52304 Type II 3-dehydroquinate dehydratase
1 1 1 0 SCOP 54060 His-Me finger endonucleases
1 1 1 0 SCOP 50685 Barwin-like endoglucanases
1 1 1 0 SCOP 55129 Ribosomal protein L30p/L7e
1 1 1 1 SCOP 55387 Frataxin/Nqo15-like
1 1 1 0 SCOP 56988 Anthrax protective antigen
1 1 1 1 SCOP 89957 MTH1187/YkoF-like
1 1 1 1 SCOP 144217 CSL zinc finger
1 1 1 0 SCOP 143744 GlcG-like
1 1 1 0 SCOP 48613 Heme oxygenase-like
1 1 1 0 SCOP 141678 MAL13P1.257-like
1 1 1 0 SCOP 54762 Signal recognition particle alu RNA binding heterodimer, SRP9/14
1 1 1 0 SCOP 142897 TFB5-like
1 1 1 1 SCOP 140718 Mediator hinge subcomplex-like
1 1 1 1 SCOP 57798 Casein kinase II beta subunit
1 1 1 0 SCOP 159468 AtpF-like
1 1 1 0 SCOP 47027 Acyl-CoA binding protein
1 1 1 0 SCOP 63393 RNA polymerase subunits
1 1 1 0 SCOP 55144 LigT-like
1 1 1 0 SCOP 55248 PCD-like
1 1 1 0 SCOP 144210 Nop10-like SnoRNP
1 1 1 0 SCOP 89895 FYSH domain
1 1 1 0 SCOP 56019 The spindle assembly checkpoint protein mad2
1 1 1 0 SCOP 51645 Malate synthase G
1 1 1 0 SCOP 47819 HRDC-like
1 1 1 0 SCOP 81508 Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 1 SCOP 140959 Indolic compounds 2,3-dioxygenase-like
1 1 1 1 SCOP 118203 Vacuolar ATP synthase subunit C
1 1 1 0 SCOP 161219 CHY zinc finger-like
1 1 1 0 SCOP 47694 Cytochrome c oxidase subunit h
1 1 1 0 SCOP 103486 V-type ATP synthase subunit C
1 1 1 0 SCOP 143870 PF0523-like
1 1 1 1 SCOP 143113 NAP-like
1 1 1 1 SCOP 46924 RNA polymerase subunit RPB10
1 1 1 0 SCOP 69618 HemD-like
1 1 1 0 SCOP 143447 AMMECR1-like
1 1 1 0 SCOP 48690 Epsilon subunit of mitochondrial F1F0-ATP synthase
1 1 1 1 SCOP 63562 RPB6/omega subunit-like
1 1 1 1 SCOP 101546 ASF1-like
1 1 1 0 SCOP 111038 YjbQ-like
1 1 1 1 SCOP 51069 Carbonic anhydrase
1 1 1 1 SCOP 55040 Molybdenum cofactor biosynthesis protein C, MoaC
1 1 1 1 SCOP 51717 Dihydropteroate synthetase-like
1 1 1 0 SCOP 55073 Nucleotide cyclase
1 1 1 0 SCOP 51998 PFL-like glycyl radical enzymes
1 1 1 0 SCOP 141571 Pentapeptide repeat-like
1 1 1 0 SCOP 55718 SCP-like
1 1 1 0 SCOP 102712 JAB1/MPN domain
1 1 1 0 SCOP 46955 Putative DNA-binding domain
1 1 1 0 SCOP 55724 Mog1p/PsbP-like
1 1 1 1 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
1 1 1 0 SCOP 55331 Tautomerase/MIF
1 1 1 0 SCOP 47413 lambda repressor-like DNA-binding domains
1 1 1 1 SCOP 56266 DmpA/ArgJ-like
1 1 1 0 SCOP 58100 Bacterial hemolysins
1 1 1 0 SCOP 82771 GIY-YIG endonuclease
1 1 1 0 SCOP 82697 PurS-like
1 1 1 0 SCOP 56349 DNA breaking-rejoining enzymes
1 1 1 1 SCOP 55083 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
1 1 1 0 SCOP 101744 Rof/RNase P subunit-like
1 1 1 0 SCOP 54447 ssDNA-binding transcriptional regulator domain
1 1 1 0 SCOP 89550 PHP domain-like
1 1 1 0 SCOP 50692 ADC-like
1 1 1 1 SCOP 89733 L-sulfolactate dehydrogenase-like
1 1 1 0 SCOP 55154 CYTH-like phosphatases
1 1 1 0 SCOP 54690 Molybdopterin synthase subunit MoaE
1 1 1 0 SCOP 54913 GlnB-like
1 1 1 0 SCOP 143410 DOPA-like
1 1 1 0 SCOP 159501 EreA/ChaN-like
1 1 1 0 SCOP 53955 Lysozyme-like
1 1 1 1 SCOP 117856 AF0104/ALDC/Ptd012-like
1 1 1 0 SCOP 54518 Tubby C-terminal domain-like
1 1 1 0 SCOP 69047 Hypothetical protein YjbJ
1 1 1 0 SCOP 54111 Urease, gamma-subunit
1 1 1 1 SCOP 51278 Urease, beta-subunit
1 1 1 0 SCOP 55200 Translation initiation factor IF3, C-terminal domain
1 1 1 0 SCOP 143081 BB1717-like
1 1 1 0 SCOP 159245 AttH-like
1 1 1 0 SCOP 50952 Soluble quinoprotein glucose dehydrogenase
1 1 1 1 SCOP 51391 Thiamin phosphate synthase
1 1 1 1 SCOP 48600 Chorismate mutase II
1 1 1 0 SCOP 109910 YgfY-like
1 1 1 0 SCOP 158694 UraD-Like
1 1 1 0 SCOP 110916 Peptidyl-tRNA hydrolase domain-like
1 1 1 0 SCOP 102588 LmbE-like
1 1 1 0 SCOP 56747 Prim-pol domain
1 1 1 1 SCOP 110581 Indigoidine synthase A-like
1 1 1 0 SCOP 140931 Fic-like
1 1 1 0 SCOP 53323 Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
1 1 1 0 SCOP 142338 CofD-like
1 1 1 0 SCOP 51219 TRAP-like
1 1 1 0 SCOP 141130 Acetamidase/Formamidase-like
1 1 1 0 SCOP 69786 YggU-like
1 1 1 0 SCOP 103196 Roadblock/LC7 domain
1 1 1 0 SCOP 64076 MTH938-like
1 1 1 0 SCOP 142764 YgbK-like
1 1 1 0 SCOP 54626 Chalcone isomerase
1 1 1 0 SCOP 47592 SWIB/MDM2 domain
1 1 1 0 SCOP 56726 DNA topoisomerase IV, alpha subunit
1 1 1 0 SCOP 74784 Translin
1 1 1 1 SCOP 89124 Nop domain
1 1 1 0 SCOP 160350 Rnp2-like
1 1 1 0 SCOP 143437 THUMP domain-like
1 1 1 0 SCOP 160374 RplX-like
1 1 1 0 SCOP 69695 SRP19
1 1 1 1 SCOP 55895 Ribonuclease Rh-like
1 1 1 0 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
1 1 1 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
1 1 1 0 SCOP 53706 Formate dehydrogenase/DMSO reductase, domains 1-3
1 1 1 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
1 1 1 1 SCOP 56512 Nitric oxide (NO) synthase oxygenase domain
1 1 1 0 SCOP 50370 Ricin B-like lectins
1 1 1 1 SCOP 82114 Riboflavin kinase-like
1 1 1 0 SCOP 69304 Tricorn protease N-terminal domain
1 1 1 0 SCOP 141255 YccV-like
1 1 1 0 SCOP 50405 Actin-crosslinking proteins
1 1 1 1 SCOP 102645 CoaB-like
1 1 1 0 SCOP 82185 Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
1 1 1 1 SCOP 48537 Phospholipase C/P1 nuclease
1 1 1 0 SCOP 58104 Methyl-accepting chemotaxis protein (MCP) signaling domain
1 1 1 0 SCOP 142921 WGR domain-like
1 1 1 1 SCOP 56719 Type II DNA topoisomerase
1 1 1 0 SCOP 144206 NOB1 zinc finger-like
1 1 1 0 SCOP 158745 LanC-like
1 1 1 0 SCOP 158472 HAMP domain-like
1 1 1 0 SCOP 56037 PheT/TilS domain
1 1 1 0 SCOP 63999 Thiamin pyrophosphokinase, catalytic domain
1 1 1 0 SCOP 58022 XRCC4, C-terminal oligomerization domain
1 1 1 1 SCOP 55307 Tubulin C-terminal domain-like
1 1 1 0 SCOP 141673 MOSC N-terminal domain-like
1 1 1 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
1 1 1 0 SCOP 142984 Nqo1 middle domain-like
1 1 1 1 SCOP 110111 Ctag/Cox11
1 1 1 0 SCOP 74853 Lamin A/C globular tail domain
1 1 1 1 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
1 1 1 0 SCOP 49363 Purple acid phosphatase, N-terminal domain
1 1 1 1 SCOP 51989 Glycosyl hydrolases family 6, cellulases
1 1 1 0 SCOP 52075 Outer arm dynein light chain 1
1 1 1 0 SCOP 55060 GHMP Kinase, C-terminal domain
1 1 1 0 SCOP 81891 Poly A polymerase C-terminal region-like
1 1 1 1 SCOP 53920 Fe-only hydrogenase
1 1 1 1 SCOP 54810 GMP synthetase C-terminal dimerisation domain
1 1 1 0 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
1 1 1 0 SCOP 51322 Cyanovirin-N
1 1 1 0 SCOP 90209 Ran binding protein zinc finger-like
1 1 1 0 SCOP 51101 Mannose-binding lectins
1 1 1 0 SCOP 47144 HSC20 (HSCB), C-terminal oligomerisation domain
1 1 1 0 SCOP 55945 TATA-box binding protein-like
1 1 1 1 SCOP 55637 Cell cycle regulatory proteins
1 1 1 1 SCOP 101278 N-terminal domain of adenylylcyclase associated protein, CAP
1 1 1 0 SCOP 140860 Pseudo ankyrin repeat-like
1 1 1 0 SCOP 81624 N-terminal domain of MutM-like DNA repair proteins
1 1 1 0 SCOP 54782 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
1 1 1 0 SCOP 140490 Nqo1C-terminal domain-like
1 1 1 0 SCOP 82714 Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
1 1 1 0 SCOP 101576 Supernatant protein factor (SPF), C-terminal domain
1 1 1 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
1 1 1 0 SCOP 57625 Invertebrate chitin-binding proteins
1 1 1 0 SCOP 54991 Anticodon-binding domain of PheRS
1 1 1 0 SCOP 141986 LD-carboxypeptidase A C-terminal domain-like
1 1 1 0 SCOP 48201 Uteroglobin-like
1 1 1 1 SCOP 89817 Mago nashi protein
1 1 1 0 SCOP 54277 CAD & PB1 domains
1 1 1 0 SCOP 48670 Transducin (heterotrimeric G protein), gamma chain
1 1 1 0 SCOP 48445 14-3-3 protein
1 1 1 1 SCOP 69000 FAD-dependent thiol oxidase
1 1 1 1 SCOP 47874 Annexin
1 1 1 0 SCOP 118359 Expressed protein At2g23090/F21P24.15
1 1 1 0 SCOP 111347 Rap/Ran-GAP
1 1 1 0 SCOP 82109 MIR domain
1 1 1 0 SCOP 47676 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
1 1 1 0 SCOP 63570 PABC (PABP) domain
1 1 1 1 SCOP 101447 Formin homology 2 domain (FH2 domain)
1 1 1 0 SCOP 47938 Functional domain of the splicing factor Prp18
1 1 1 0 SCOP 49599 TRAF domain-like
1 1 1 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
1 1 1 0 SCOP 69012 alpha-ketoacid dehydrogenase kinase, N-terminal domain
1 1 1 0 SCOP 88798 N-terminal, heterodimerisation domain of RBP7 (RpoE)
1 1 1 0 SCOP 140102 ISY1 domain-like
1 1 1 0 SCOP 103107 Hypothetical protein c14orf129, hspc210
1 1 1 1 SCOP 75632 Cullin homology domain
1 1 1 0 SCOP 63491 BAG domain
1 1 1 1 SCOP 142019 Nqo1 FMN-binding domain-like
1 1 1 0 SCOP 54368 Glutamine synthetase, N-terminal domain
1 1 1 1 SCOP 109885 I/LWEQ domain
1 1 1 0 SCOP 143791 DUSP-like
1 1 1 0 SCOP 109925 Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain
1 1 1 0 SCOP 46585 HR1 repeat
1 1 1 0 SCOP 54529 Mitochondrial glycoprotein MAM33-like
1 1 1 1 SCOP 89942 eEF1-gamma domain
1 1 1 0 SCOP 57180 Cellulose-binding domain
1 1 1 0 SCOP 75615 Siroheme synthase middle domains-like
1 1 1 0 SCOP 102848 NSFL1 (p97 ATPase) cofactor p47, SEP domain
1 1 1 0 SCOP 101489 Eukaryotic initiation factor 4f subunit eIF4g, eIF4e-binding domain
1 1 1 0 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
1 1 1 0 SCOP 82215 C-terminal autoproteolytic domain of nucleoporin nup98
1 1 1 0 SCOP 81822 RuBisCo LSMT C-terminal, substrate-binding domain
1 1 1 0 SCOP 57424 LDL receptor-like module
1 1 1 0 SCOP 46942 Elongation factor TFIIS domain 2
1 1 1 1 SCOP 140427 VPS28 C-terminal domain-like
1 1 1 0 SCOP 159065 Dom34/Pelota N-terminal domain-like
1 1 1 1 SCOP 69340 C-terminal domain of adenylylcyclase associated protein
1 1 1 0 SCOP 143575 GAS2 domain-like
1 1 1 0 SCOP 159042 Plus3-like
1 1 1 1 SCOP 88802 Pre-PUA domain
1 1 1 0 SCOP 63862 Thiamin pyrophosphokinase, substrate-binding domain
1 1 1 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
1 1 1 0 SCOP 55711 Subdomain of clathrin and coatomer appendage domain
1 1 1 0 SCOP 55003 PAP/Archaeal CCA-adding enzyme, C-terminal domain
1 1 1 0 SCOP 102860 mRNA decapping enzyme DcpS N-terminal domain
1 1 1 0 SCOP 101420 C-terminal domain of Ku80
1 1 1 0 SCOP 160897 Taf5 N-terminal domain-like
1 1 1 0 SCOP 140383 BSD domain-like
1 1 1 0 SCOP 54585 Cdc48 domain 2-like
1 1 1 0 SCOP 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
1 1 1 1 SCOP 140586 Dcp2 domain-like
1 1 1 1 SCOP 101790 Aminomethyltransferase beta-barrel domain
1 1 1 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 1 1 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
1 1 1 0 SCOP 160467 PH0987 N-terminal domain-like
1 1 1 0 SCOP 101224 HAND domain of the nucleosome remodeling ATPase ISWI
1 1 1 0 SCOP 109728 Hypothetical protein AF0491, middle domain
1 1 1 0 SCOP 109736 FGAM synthase PurL, linker domain
1 1 1 1 SCOP 47587 Domain of poly(ADP-ribose) polymerase
1 1 1 0 SCOP 57770 Methionyl-tRNA synthetase (MetRS), Zn-domain
1 1 1 0 SCOP 140125 Rabenosyn-5 Rab-binding domain-like
1 1 1 0 SCOP 143026 Kinetochore globular domain

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The following superfamilies have one or more weak hits:

SCOP superfamily Myosin rod fragments
SCOP superfamily Troponin coil-coiled subunits
SCOP superfamily Neurotransmitter-gated ion-channel transmembrane pore
SCOP superfamily Inhibitor of vertebrate lysozyme, Ivy
SCOP superfamily Prokaryotic lipoproteins and lipoprotein localization factors
SCOP superfamily Cobalamin adenosyltransferase-like
SCOP superfamily Sigma2 domain of RNA polymerase sigma factors
SCOP superfamily Cysteine-rich DNA binding domain, (DM domain)
SCOP superfamily TSP-1 type 1 repeat
SCOP superfamily OsmC-like
SCOP superfamily AlbA-like
SCOP superfamily SEA domain
SCOP superfamily GckA/TtuD-like
SCOP superfamily BAH domain
SCOP superfamily BRCA2 helical domain
SCOP superfamily Bacterial aa3 type cytochrome c oxidase subunit IV
SCOP superfamily Cytochrome c oxidase subunit III-like
SCOP superfamily Cytochrome c oxidase subunit I-like
SCOP superfamily Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
SCOP superfamily Adenylylcyclase toxin (the edema factor)
SCOP superfamily Rad50 coiled-coil Zn hook
SCOP superfamily Mitotic arrest deficient-like 1, Mad1
SCOP superfamily Plakin repeat
SCOP superfamily Variable surface antigen VlsE
SCOP superfamily C-terminal domain of PLC-beta
SCOP superfamily Colicin E3 receptor domain
SCOP superfamily gp5 N-terminal domain-like
SCOP superfamily Anti-sigma factor AsiA
SCOP superfamily FAT domain of focal adhesion kinase
SCOP superfamily PEP carboxykinase N-terminal domain
SCOP superfamily Cellulose docking domain, dockering
SCOP superfamily Phase 1 flagellin
SCOP superfamily Chorismate lyase-like
SCOP superfamily Pyridoxine 5'-phosphate synthase
SCOP superfamily P-domain of calnexin/calreticulin
SCOP superfamily Ribonuclease domain of colicin E3
SCOP superfamily Apolipoprotein A-I
SCOP superfamily Variant surface glycoprotein (N-terminal domain)
SCOP superfamily Outer membrane lipoprotein
SCOP superfamily TAZ domain
SCOP superfamily Rubredoxin-like
SCOP superfamily Serine protease inhibitors
SCOP superfamily Trefoil
SCOP superfamily Hairpin loop containing domain-like
SCOP superfamily EGF/Laminin
SCOP superfamily Growth factor receptor domain
SCOP superfamily Aerolisin/ETX pore-forming domain
SCOP superfamily Lipovitellin-phosvitin complex; beta-sheet shell regions
SCOP superfamily Outer membrane efflux proteins (OEP)
SCOP superfamily Upper collar protein gp10 (connector protein)
SCOP superfamily Fibrinogen C-terminal domain-like
SCOP superfamily Methenyltetrahydromethanopterin cyclohydrolase
SCOP superfamily Regulatory factor Nef
SCOP superfamily Ribosomal protein L9 C-domain
SCOP superfamily Hedgehog/DD-peptidase
SCOP superfamily YcfA/nrd intein domain
SCOP superfamily Pili subunits
SCOP superfamily Translation initiation factor IF3, N-terminal domain
SCOP superfamily Periplasmic binding protein-like I
SCOP superfamily "Helical backbone" metal receptor
SCOP superfamily Molybdenum cofactor biosynthesis proteins
SCOP superfamily Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
SCOP superfamily Phosphotyrosine protein phosphatases I
SCOP superfamily Methylesterase CheB, C-terminal domain
SCOP superfamily Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
SCOP superfamily SpoIIaa-like
SCOP superfamily Peptidase/esterase 'gauge' domain
SCOP superfamily TolB, C-terminal domain
SCOP superfamily PRC-barrel domain
SCOP superfamily N-terminal domains of the minor coat protein g3p
SCOP superfamily Electron transport accessory proteins
SCOP superfamily Myosin S1 fragment, N-terminal domain
SCOP superfamily Osmotin, thaumatin-like protein
SCOP superfamily Spermadhesin, CUB domain
SCOP superfamily Virus attachment protein globular domain
SCOP superfamily ENV polyprotein, receptor-binding domain
SCOP superfamily Group II dsDNA viruses VP
SCOP superfamily gamma-Crystallin-like
SCOP superfamily Rab geranylgeranyltransferase alpha-subunit, insert domain
SCOP superfamily PKD domain
SCOP superfamily Multiheme cytochromes
SCOP superfamily Moesin tail domain
SCOP superfamily Tetraspanin
SCOP superfamily Nuclear receptor ligand-binding domain
SCOP superfamily Bacterial muramidases
SCOP superfamily LigA subunit of an aromatic-ring-opening dioxygenase LigAB
SCOP superfamily C-terminal domain of alpha and beta subunits of F1 ATP synthase
SCOP superfamily Wiscott-Aldrich syndrome protein, WASP, C-terminal domain
SCOP superfamily Saposin
SCOP superfamily Apolipophorin-III
SCOP superfamily Hepatitis B viral capsid (hbcag)
SCOP superfamily Retroviral matrix proteins
SCOP superfamily Chemotaxis receptor methyltransferase CheR, N-terminal domain
SCOP superfamily STAT
SCOP superfamily ROP protein
SCOP superfamily Bacterial GAP domain
SCOP superfamily Apolipoprotein
SCOP superfamily Methane monooxygenase hydrolase, gamma subunit
SCOP superfamily Kix domain of CBP (creb binding protein)
SCOP superfamily Tubulin chaperone cofactor A
SCOP superfamily Enzyme IIa from lactose specific PTS, IIa-lac
SCOP superfamily Double-stranded DNA-binding domain
SCOP superfamily Cytochrome c
SCOP superfamily alpha-helical ferredoxin
SCOP superfamily Globin-like
SCOP superfamily PspA lactotransferrin-binding region
SCOP superfamily E6 C-terminal domain-like
SCOP superfamily YfgJ-like
SCOP superfamily MetI-like
SCOP superfamily Photosystem II antenna protein-like
SCOP superfamily SNF-like
SCOP superfamily Photosystem II 10 kDa phosphoprotein PsbH
SCOP superfamily MalF N-terminal region-like
SCOP superfamily gpW/gp25-like
SCOP superfamily YehR-like
SCOP superfamily BB2672-like
SCOP superfamily BLRF2-like
SCOP superfamily YdhG-like
SCOP superfamily YopX-like
SCOP superfamily Lipase chaperone-like
SCOP superfamily MG296-like
SCOP superfamily TerB-like
SCOP superfamily ENT-like
SCOP superfamily YheA/YmcA-like
SCOP superfamily Vanabin-like
SCOP superfamily Peptidoglycan deacetylase N-terminal noncatalytic region
SCOP superfamily Nqo5-like
SCOP superfamily EndoU-like
SCOP superfamily ComB-like
SCOP superfamily PTSIIA/GutA-like
SCOP superfamily Allene oxide cyclase-like
SCOP superfamily Glu-tRNAGln amidotransferase C subunit
SCOP superfamily Duffy binding domain-like
SCOP superfamily PA2201 C-terminal domain-like
SCOP superfamily MukF C-terminal domain-like
SCOP superfamily EsxAB dimer-like
SCOP superfamily MW0975(SA0943)-like
SCOP superfamily MIT domain-like
SCOP superfamily Proton glutamate symport protein
SCOP superfamily Viral ssDNA binding protein
SCOP superfamily WWE domain
SCOP superfamily Flagellar hook protein flgE
SCOP superfamily Hypothetical protein PA1324
SCOP superfamily LEA14-like
SCOP superfamily DNA-binding domain of EIN3-like
SCOP superfamily Coronavirus S2 glycoprotein
SCOP superfamily OmpH-like
SCOP superfamily Urocanase
SCOP superfamily Her-1
SCOP superfamily Triger factor/SurA peptide-binding domain-like
SCOP superfamily PhoU-like
SCOP superfamily KorB DNA-binding domain-like
SCOP superfamily DnaK suppressor protein DksA, alpha-hairpin domain
SCOP superfamily Sec-C motif
SCOP superfamily Plexin repeat
SCOP superfamily Autotransporter
SCOP superfamily Virulence-associated V antigen
SCOP superfamily Sensory domain-like
SCOP superfamily Putative isomerase YbhE
SCOP superfamily NHL repeat
SCOP superfamily ADP-ribosylglycohydrolase
SCOP superfamily Hypothetical protein MTH393
SCOP superfamily YutG-like
SCOP superfamily XPC-binding domain
SCOP superfamily Typo IV secretion system protein TraC
SCOP superfamily IP3 receptor type 1 binding core, domain 2

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.