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  Home > Genomes > Family assignments for Thermincola potens JR


Thermincola potens JR family assignments

Taxonomy
Taxonomy browser entry

Bacteria; Terrabacteria group; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola; Thermincola potens; Thermincola potens JR

Downloads
Fasta format sequences
Domain assignments

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Assignment statistics

Sequences: 2949 total
1972 (67 %) with assignment
305 average length
62 % amino acid coverage
Domains: 2934 total
667 unique superfamilies
465 unique families
285 average length
4.4 average superfamily size
77 % formed by duplication
Domain combinations: 444 domain pairs
983 unique architectures

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Family assignments

Domains

Proteins

SCOP link

Families
50 48 SCOP 52686 ABC transporter ATPase domain-like
20 18 SCOP 81269 Extended AAA-ATPase domain
17 17 SCOP 53851 Phosphate binding protein-like
14 13 SCOP 52592 G proteins
13 7 SCOP 81268 Tandem AAA-ATPase domain
11 11 SCOP 52173 CheY-related
11 11 SCOP 53707 Formate dehydrogenase/DMSO reductase, domains 1-3
11 11 SCOP 58105 Methyl-accepting chemotaxis protein (MCP) signaling domain
10 10 SCOP 55682 Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
9 9 SCOP 52670 RecA protein-like (ATPase-domain)
9 9 SCOP 56802 Acetyl-CoA synthetase-like
9 9 SCOP 117984 GGDEF domain
8 8 SCOP 52375 Class I aminoacyl-tRNA synthetases (RS), catalytic domain
8 8 SCOP 52652 Nitrogenase iron protein-like
8 4 SCOP 53068 Actin/HSP70
7 7 SCOP 53417 GABA-aminotransferase-like
6 6 SCOP 50282 Cold shock DNA-binding domain-like
6 6 SCOP 51751 Tyrosine-dependent oxidoreductases
6 6 SCOP 52318 Class I glutamine amidotransferases (GAT)
6 4 SCOP 52441 BC N-terminal domain-like
6 6 SCOP 53384 AAT-like
6 4 SCOP 56067 BC ATP-binding domain-like
6 6 SCOP 56602 beta-Lactamase/D-ala carboxypeptidase
5 5 SCOP 52541 Nucleotide and nucleoside kinases
5 5 SCOP 53272 Phosphoribosyltransferases (PRTases)
5 5 SCOP 53402 Cystathionine synthase-like
5 5 SCOP 53687 Tryptophan synthase beta subunit-like PLP-dependent enzymes
5 5 SCOP 56771 Nickel-iron hydrogenase, small subunit
5 3 SCOP 82867 Multidrug efflux transporter AcrB transmembrane domain
4 4 SCOP 48311 Aldehyde ferredoxin oxidoreductase, C-terminal domains
4 4 SCOP 50448 Elongation factors
4 4 SCOP 51570 Class I aldolase
4 4 SCOP 51883 Aminoacid dehydrogenase-like, C-terminal domain
4 2 SCOP 53080 Acetokinase-like
4 4 SCOP 53624 MurCDEF
4 4 SCOP 53816 Nitrogenase iron-molybdenum protein
4 3 SCOP 54815 Prokaryotic type KH domain (KH-domain type II)
4 4 SCOP 55327 PurM N-terminal domain-like
4 4 SCOP 56229 Aldehyde ferredoxin oxidoreductase, N-terminal domain
4 4 SCOP 56763 Nickel-iron hydrogenase, large subunit
4 4 SCOP 64514 Carbon monoxide dehydrogenase
4 4 SCOP 110734 Glycosyl transferases group 1
4 4 SCOP 142721 PyrH-like
4 4 SCOP 161099 MetI-like
3 3 SCOP 48711 Di-heme elbow motif
3 1 SCOP 49550 Multidomain cupredoxins
3 3 SCOP 50678 ValRS/IleRS/LeuRS editing domain
3 3 SCOP 51381 Tryptophan biosynthesis enzymes
3 3 SCOP 51396 FMN-linked oxidoreductases
3 3 SCOP 51599 Class I DAHP synthetase
3 3 SCOP 51723 Methyltetrahydrofolate-utiluzing methyltransferases
3 3 SCOP 51800 Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
3 3 SCOP 52403 N-type ATP pyrophosphatases
3 3 SCOP 52744 Subtilases
3 3 SCOP 54212 Translational machinery components
3 2 SCOP 54229 Ribonuclease PH domain 1-like
3 3 SCOP 54884 Ferredoxin domains from multidomain proteins
3 3 SCOP 54914 Prokaryotic signal transducing protein
3 3 SCOP 55209 Enolpyruvate transferase, EPT
3 3 SCOP 55348 GAPDH-like
3 3 SCOP 55921 Creatinase/aminopeptidase
3 1 SCOP 55974 S-adenosylmethionine synthetase
3 3 SCOP 56043 PurM C-terminal domain-like
3 3 SCOP 56236 Class II glutamine amidotransferases
3 3 SCOP 64089 BadF/BadG/BcrA/BcrD-like
3 3 SCOP 69892 Iron-containing alcohol dehydrogenase
3 3 SCOP 75459 Pseudouridine synthase RsuA/RluD
3 3 SCOP 88854 Protein kinases, catalytic subunit
3 3 SCOP 102517 N-acetylmuramoyl-L-alanine amidase-like
3 3 SCOP 102575 NOL1/NOP2/sun
3 3 SCOP 141524 L,D-transpeptidase catalytic domain-like
3 3 SCOP 142020 Nqo1 FMN-binding domain-like
3 3 SCOP 143415 CcmK-like
2 2 SCOP 47324 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
2 2 SCOP 47730 Prokaryotic DNA-bending protein
2 2 SCOP 47918 C-terminal domain of alpha and beta subunits of F1 ATP synthase
2 2 SCOP 48109 Carbamoyl phosphate synthetase, large subunit connection domain
2 2 SCOP 48558 L-aspartase/fumarase
2 2 SCOP 48577 Isoprenyl diphosphate synthases
2 2 SCOP 50342 CheW-like
2 2 SCOP 50466 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
2 2 SCOP 50495 Prokaryotic proteases
2 2 SCOP 50616 N-terminal domain of alpha and beta subunits of F1 ATP synthase
2 2 SCOP 50696 Formate dehydrogenase/DMSO reductase, C-terminal domain
2 2 SCOP 51367 Histidine biosynthesis enzymes
2 2 SCOP 51392 Thiamin phosphate synthase
2 2 SCOP 51420 Alanine racemase-like, N-terminal domain
2 2 SCOP 51830 Formate/glycerate dehydrogenases, NAD-domain
2 2 SCOP 52017 LeuD-like
2 2 SCOP 52397 Adenylyltransferase
2 2 SCOP 52419 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
2 2 SCOP 52508 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
2 2 SCOP 52734 Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
2 2 SCOP 52739 Methylesterase CheB, C-terminal domain
2 2 SCOP 52769 Arginase-like amidino hydrolases
2 2 SCOP 53099 Ribonuclease H
2 2 SCOP 53138 Ribosomal protein L18 and S11
2 2 SCOP 53168 Purine and uridine phosphorylases
2 2 SCOP 53329 Formyltransferase
2 2 SCOP 53620 Thiamin biosynthesis kinases
2 2 SCOP 53660 Dimeric isocitrate & isopropylmalate dehydrogenases
2 2 SCOP 53672 Aspartate/ornithine carbamoyltransferase
2 2 SCOP 53733 Aconitase iron-sulfur domain
2 2 SCOP 53785 Phosphofructokinase
2 2 SCOP 53791 Tetrapyrrole methylase
2 1 SCOP 53902 Thiolase-related
2 2 SCOP 54632 CBS-domain pair
2 1 SCOP 54981 EF-G/eEF-2 domains III and V
2 2 SCOP 55368 Dihydrodipicolinate reductase-like
2 2 SCOP 55879 DNA gyrase/MutL, N-terminal domain
2 2 SCOP 55884 Histidine kinase
2 2 SCOP 55932 Glutamine synthetase catalytic domain
2 1 SCOP 56054 Ribosomal protein L6
2 2 SCOP 56323 ADC synthase
2 2 SCOP 56350 Lambda integrase-like, catalytic core
2 2 SCOP 56753 D-aminoacid aminotransferase-like PLP-dependent enzymes
2 2 SCOP 63883 MoeA N-terminal region -like
2 2 SCOP 64006 Undecaprenyl diphosphate synthase
2 2 SCOP 69066 RNase III catalytic domain-like
2 2 SCOP 69557 Spermidine synthase
2 2 SCOP 75218 SpoU-like RNA 2'-O ribose methyltransferase
2 2 SCOP 75621 Release factor
2 2 SCOP 81605 PP2C-like
2 1 SCOP 82440 ATPase domain of dehydratase reactivase alpha subunit
2 2 SCOP 82550 DegV-like
2 2 SCOP 89572 Biotin dependent carboxylase carboxyltransferase domain
2 2 SCOP 89800 Deoxycytidylate deaminase-like
2 2 SCOP 90046 Arginine decarboxylase
2 2 SCOP 100921 Heat shock protein 70kD (HSP70), peptide-binding domain
2 2 SCOP 102189 AmyC N-terminal domain-like
2 2 SCOP 111039 YjbQ-like
2 2 SCOP 111284 Putative modulator of DNA gyrase, PmbA/TldD
2 2 SCOP 111353 Ammonium transporter
2 2 SCOP 140991 FtsH protease domain-like
2 2 SCOP 143598 YojJ-like
2 2 SCOP 144028 Nqo4-like
2 2 SCOP 159832 PBP transglycosylase domain-like
1 1 SCOP 46566 Chaperone J-domain
1 1 SCOP 46903 Spo0A
1 1 SCOP 46907 Ribosomal protein L11, C-terminal domain
1 1 SCOP 46947 Ribosomal protein S13
1 1 SCOP 46978 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
1 1 SCOP 47064 Ribosomal protein S15
1 1 SCOP 47149 Diol dehydratase, gamma subunit
1 1 SCOP 47241 Ferritin
1 1 SCOP 47447 Signal peptide-binding domain
1 1 SCOP 47786 NAD+-dependent DNA ligase, domain 3
1 1 SCOP 47790 C-terminal domain of RNA polymerase alpha subunit
1 1 SCOP 47974 Ribosomal protein S7
1 1 SCOP 48025 N-terminal domain of DnaB helicase
1 1 SCOP 48030 FliG
1 1 SCOP 48151 Endonuclease III
1 1 SCOP 48184 Acetohydroxy acid isomeroreductase (ketol-acid reductoisomerase, KARI)
1 1 SCOP 48197 Glycerol-3-phosphate dehydrogenase
1 1 SCOP 48257 Citrate synthase
1 1 SCOP 48335 DNA repair protein MutS, domain III
1 1 SCOP 48593 GroEL chaperone, ATPase domain
1 1 SCOP 49368 Superoxide reductase-like
1 1 SCOP 50114 C-terminal domain of ribosomal protein L2
1 1 SCOP 50130 GroES
1 1 SCOP 50194 Ribosomal protein L14
1 1 SCOP 50277 Myf domain
1 1 SCOP 50461 Ribosomal protein L3
1 1 SCOP 50482 NADH:FMN oxidoreductase-like
1 1 SCOP 50693 Pyruvoyl dependent aspartate decarboxylase, ADC
1 1 SCOP 51171 GlmU C-terminal domain-like
1 1 SCOP 51220 Trp RNA-binding attenuation protein (TRAP)
1 1 SCOP 51231 Biotinyl/lipoyl-carrier proteins and domains
1 1 SCOP 51247 BC C-terminal domain-like
1 1 SCOP 51279 Urease, beta-subunit
1 1 SCOP 51284 dUTPase-like
1 1 SCOP 51339 alpha-Subunit of urease
1 1 SCOP 51352 Triosephosphate isomerase (TIM)
1 1 SCOP 51372 D-ribulose-5-phosphate 3-epimerase
1 1 SCOP 51375 Decarboxylase
1 1 SCOP 51413 Inosine monophosphate dehydrogenase (IMPDH)
1 1 SCOP 51560 alpha-subunit of urease, catalytic domain
1 1 SCOP 51591 Class II FBP aldolase
1 1 SCOP 51594 5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase)
1 1 SCOP 51605 Enolase
1 1 SCOP 51609 D-glucarate dehydratase-like
1 1 SCOP 51622 Pyruvate kinase
1 1 SCOP 51629 Pyruvate phosphate dikinase, C-terminal domain
1 1 SCOP 51638 HpcH/HpaI aldolase
1 1 SCOP 51659 Endonuclease IV
1 1 SCOP 51691 NadC C-terminal domain-like
1 1 SCOP 51710 Diol dehydratase, alpha subunit
1 1 SCOP 51714 tRNA-guanine transglycosylase
1 1 SCOP 51718 Dihydropteroate synthetase
1 1 SCOP 51848 LDH N-terminal domain-like
1 1 SCOP 51868 6-phosphogluconate dehydrogenase-like, N-terminal domain
1 1 SCOP 51934 Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
1 1 SCOP 52005 Class III anaerobic ribonucleotide reductase NRDD subunit
1 1 SCOP 52010 Pyruvate phosphate dikinase, central domain
1 1 SCOP 52022 Carbamoyl phosphate synthetase, small subunit N-terminal domain
1 1 SCOP 52030 GroEL-like chaperone, apical domain
1 1 SCOP 52081 Ribosomal proteins L15p and L18e
1 1 SCOP 52097 Clp protease, ClpP subunit
1 1 SCOP 52100 Tail specific protease, catalytic domain
1 1 SCOP 52122 Lumazine synthase
1 1 SCOP 52147 Mug-like
1 1 SCOP 52152 FabD-like
1 1 SCOP 52162 Ribosomal protein L13
1 1 SCOP 52167 Ribosomal protein L4
1 1 SCOP 52235 Quinone reductase
1 1 SCOP 52256 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
1 1 SCOP 52300 S-adenosylhomocystein hydrolase
1 1 SCOP 52305 Type II 3-dehydroquinate dehydratase
1 1 SCOP 52314 Ribosomal protein S2
1 1 SCOP 52475 Pyruvate oxidase and decarboxylase, middle domain
1 1 SCOP 52491 Tubulin, GTPase domain
1 1 SCOP 52773 Histone deacetylase, HDAC
1 1 SCOP 52944 ATP synthase (F1-ATPase), gamma subunit
1 1 SCOP 52955 Anticodon-binding domain of Class II aaRS
1 1 SCOP 52969 Diol dehydratase, beta subunit
1 1 SCOP 52973 ITPase (Ham1)
1 1 SCOP 52976 Maf-like
1 1 SCOP 53045 5' to 3' exonuclease catalytic domain
1 1 SCOP 53057 beta-carbonic anhydrase, cab
1 1 SCOP 53134 RuvC resolvase
1 1 SCOP 53179 Peptidyl-tRNA hydrolase-like
1 1 SCOP 53204 Bacterial dinuclear zinc exopeptidases
1 1 SCOP 53219 MogA-like
1 1 SCOP 53240 Malic enzyme N-domain
1 1 SCOP 53245 MurCDEF C-terminal domain
1 1 SCOP 53296 Phosphoribosylpyrophosphate synthetase-like
1 1 SCOP 53461 UDP-glucose pyrophosphorylase
1 1 SCOP 53464 glucose-1-phosphate thymidylyltransferase
1 1 SCOP 53614 Ribokinase-like
1 1 SCOP 53629 Folylpolyglutamate synthetase
1 1 SCOP 53682 Aspartate/glutamate racemase
1 1 SCOP 53698 double-SIS domain
1 1 SCOP 53721 ALDH-like
1 1 SCOP 53749 Phosphoglycerate kinase
1 1 SCOP 53760 Peptidoglycan biosynthesis glycosyltransferase MurG
1 1 SCOP 53763 UDP-N-acetylglucosamine 2-epimerase
1 1 SCOP 53766 Oligosaccharide phosphorylase
1 1 SCOP 53823 L-arabinose binding protein-like
1 1 SCOP 53914 Chalcone synthase-like
1 1 SCOP 53921 Fe-only hydrogenase
1 1 SCOP 53928 Cytidine deaminase
1 1 SCOP 54112 Urease, gamma-subunit
1 1 SCOP 54198 HIT (HINT, histidine triad) family of protein kinase-interacting proteins
1 1 SCOP 54224 DNA gyrase/MutL, second domain
1 1 SCOP 54232 GHMP Kinase, N-terminal domain
1 1 SCOP 54365 Translation initiation factor IF3, N-terminal domain
1 1 SCOP 54535 FKBP immunophilin/proline isomerase
1 1 SCOP 54571 Ribosomal protein S19
1 1 SCOP 54638 4HBT-like
1 1 SCOP 54714 Elongation factor Ts (EF-Ts), dimerisation domain
1 1 SCOP 54748 Ribosomal L11/L12e N-terminal domain
1 1 SCOP 54811 GMP synthetase C-terminal dimerisation domain
1 1 SCOP 54822 Ribosomal protein S3 C-terminal domain
1 1 SCOP 54827 Enolase N-terminal domain-like
1 1 SCOP 54844 Ribosomal protein L22
1 1 SCOP 54920 Nucleoside diphosphate kinase, NDK
1 1 SCOP 55000 Ribosomal protein S10
1 1 SCOP 55041 Molybdenum cofactor biosynthesis protein C, MoaC
1 1 SCOP 55084 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
1 1 SCOP 55121 Pseudouridine synthase I TruA
1 1 SCOP 55178 Ribosomal protein S4
1 1 SCOP 55187 Threonyl-tRNA synthetase (ThrRS), second 'additional' domain
1 1 SCOP 55195 Ribosome recycling factor, RRF
1 1 SCOP 55201 Translation initiation factor IF3, C-terminal domain
1 1 SCOP 55262 GAD domain
1 1 SCOP 55272 DNA repair protein MutS, domain I
1 1 SCOP 55283 Ribosomal protein L5
1 1 SCOP 55304 Chorismate mutase
1 1 SCOP 55308 Tubulin, C-terminal domain
1 1 SCOP 55621 GTP cyclohydrolase I
1 1 SCOP 55628 DHN aldolase/epimerase
1 1 SCOP 55667 Ribonuclease PH domain 2-like
1 1 SCOP 55707 Biotin holoenzyme synthetase
1 1 SCOP 55822 YrdC-like
1 1 SCOP 55935 Guanido kinase catalytic domain
1 1 SCOP 56038 B3/B4 domain of PheRS, PheT
1 1 SCOP 56048 Ribosomal protein S8
1 1 SCOP 56060 ATP-binding domain of peptide synthetases
1 1 SCOP 56085 Pyruvate phosphate dikinase, N-terminal domain
1 1 SCOP 56096 Adenylation domain of NAD+-dependent DNA ligase
1 1 SCOP 56105 SAICAR synthase
1 1 SCOP 56184 Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain
1 1 SCOP 56251 Proteasome subunits
1 1 SCOP 56328 Lactate & malate dehydrogenases, C-terminal domain
1 1 SCOP 56421 Peptide deformylase
1 1 SCOP 56426 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
1 1 SCOP 56554 Insert subdomain of RNA polymerase alpha subunit
1 1 SCOP 56673 DNA polymerase I
1 1 SCOP 56713 Prokaryotic type I DNA topoisomerase
1 1 SCOP 56720 Type II DNA topoisomerase
1 1 SCOP 56732 DNA primase DnaG catalytic core
1 1 SCOP 56797 Dehydroquinate synthase, DHQS
1 1 SCOP 56809 Ribosomal protein L1
1 1 SCOP 56822 Hybrid cluster protein (prismane protein)
1 1 SCOP 57792 DNA primase zinc finger
1 1 SCOP 63412 MPP-like
1 1 SCOP 63588 Glycosyltransferase family 36 C-terminal domain
1 1 SCOP 63733 Glycosyltransferase family 36 N-terminal domain
1 1 SCOP 63801 ATP sulfurylase N-terminal domain
1 1 SCOP 63944 Potassium channel NAD-binding domain
1 1 SCOP 63966 Precorrin-8X methylmutase CbiC/CobH
1 1 SCOP 63971 Inosicase
1 1 SCOP 63976 Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC)
1 1 SCOP 63979 ATP sulfurylase catalytic domain
1 1 SCOP 64095 Germination protease
1 1 SCOP 64103 MoeA central domain-like
1 1 SCOP 64154 YjeF N-terminal domain-like
1 1 SCOP 64159 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
1 1 SCOP 64162 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, catalytic domain
1 1 SCOP 64168 SurE-like
1 1 SCOP 64183 Manganese-dependent inorganic pyrophosphatase (family II)
1 1 SCOP 64198 AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC
1 1 SCOP 64264 Prokaryotic ribosomal protein L17
1 1 SCOP 64372 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB
1 1 SCOP 64398 Hsp33 domain
1 1 SCOP 64485 RNA-polymerase beta
1 1 SCOP 64490 RNA-polymerase beta-prime
1 1 SCOP 64519 Phase 1 flagellin
1 1 SCOP 68901 Cytidylytransferase
1 1 SCOP 69026 Hypothetical protein MTH865
1 1 SCOP 69501 DTD-like
1 1 SCOP 69602 L-histidinol dehydrogenase HisD
1 1 SCOP 69706 Transcription factor NusA, N-terminal domain
1 1 SCOP 69746 Pseudouridine synthase II TruB
1 1 SCOP 69766 IpsF-like
1 1 SCOP 69865 Argininosuccinate synthetase, C-terminal domain
1 1 SCOP 74732 Ribosomal protein L20
1 1 SCOP 74983 Small protein B (SmpB)
1 1 SCOP 75073 Hydantoinase (dihydropyrimidinase), catalytic domain
1 1 SCOP 75079 Renal dipeptidase
1 1 SCOP 75264 Glucose-inhibited division protein B (GidB)
1 1 SCOP 75292 YjeF C-terminal domain-like
1 1 SCOP 75297 N-acetyl-l-glutamate kinase
1 1 SCOP 75305 Amidase signature (AS) enzymes
1 1 SCOP 75323 Exonuclease RecJ
1 1 SCOP 75472 YhbY-like
1 1 SCOP 75513 IclR ligand-binding domain-like
1 1 SCOP 75554 Smc hinge domain
1 1 SCOP 75626 YebC-like
1 1 SCOP 81656 Meta-cation ATPase, catalytic domain P
1 1 SCOP 81768 Pre-protein crosslinking domain of SecA
1 1 SCOP 81887 Helical scaffold and wing domains of SecA
1 1 SCOP 82052 Obg GTP-binding protein N-terminal domain
1 1 SCOP 82075 Kid/PemK
1 1 SCOP 82258 SAH/MTA deaminase-like
1 1 SCOP 82261 N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain
1 1 SCOP 82267 TatD Mg-dependent DNase-like
1 1 SCOP 82318 Swiveling domain of dehydratase reactivase alpha subunit
1 1 SCOP 82336 Shikimate dehydrogenase-like
1 1 SCOP 82359 PP-loop ATPase
1 1 SCOP 82371 YbeA-like
1 1 SCOP 82388 Predicted hydrolases Cof
1 1 SCOP 82475 MraW-like putative methyltransferases
1 1 SCOP 82540 Trehalose-6-phosphate synthase, OtsA
1 1 SCOP 82583 G domain-linked domain
1 1 SCOP 82661 Poly A polymerase head domain-like
1 1 SCOP 82680 N-utilization substance G protein NusG, N-terminal domain
1 1 SCOP 82852 Acetyl-CoA synthase
1 1 SCOP 88682 Alanine racemase
1 1 SCOP 88683 Eukaryotic ODC-like
1 1 SCOP 88724 Pyruvate oxidase and decarboxylase Pyr module
1 1 SCOP 88749 Pyruvate oxidase and decarboxylase PP module
1 1 SCOP 88760 TK-like PP module
1 1 SCOP 88784 rRNA adenine dimethylase-like
1 1 SCOP 88947 Sigma2 domain of RNA polymerase sigma factors
1 1 SCOP 89032 Cobalamin adenosyltransferase
1 1 SCOP 89096 GatB/YqeY domain
1 1 SCOP 89489 Isoaspartyl dipeptidase, catalytic domain
1 1 SCOP 89494 HMGL-like
1 1 SCOP 89503 Ketopantoate hydroxymethyltransferase PanB
1 1 SCOP 89551 PHP domain
1 1 SCOP 89559 NodB-like polysaccharide deacetylase
1 1 SCOP 89624 Ribose/Galactose isomerase RpiB/AlsB
1 1 SCOP 89629 tRNA(m1G37)-methyltransferase TrmD
1 1 SCOP 89632 YggJ C-terminal domain-like
1 1 SCOP 89729 Patatin
1 1 SCOP 89743 N5-glutamine methyltransferase, HemK
1 1 SCOP 89958 MTH1187-like
1 1 SCOP 90087 GlpX-like bacterial fructose-1,6-bisphosphatase
1 1 SCOP 100888 Lesion bypass DNA polymerase (Y-family), catalytic domain
1 1 SCOP 101340 HD domain
1 1 SCOP 101354 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 SCOP 101479 ADP-ribosylglycohydrolase
1 1 SCOP 101802 Surface presentation of antigens (SPOA)
1 1 SCOP 101822 Aminopeptidase/glucanase lid domain
1 1 SCOP 101899 NHL repeat
1 1 SCOP 101905 GyrA/ParC C-terminal domain-like
1 1 SCOP 102111 (2r)-phospho-3-sulfolactate synthase ComA
1 1 SCOP 102115 Biotin synthase
1 1 SCOP 102485 Putative Holliday junction resolvase RuvX
1 1 SCOP 102589 LmbE-like
1 1 SCOP 102646 CoaB-like
1 1 SCOP 102660 PlsX-like
1 1 SCOP 102663 Phosphotransacetylase
1 1 SCOP 102706 NIF3 (NGG1p interacting factor 3)-like
1 1 SCOP 102766 Imidazole glycerol phosphate dehydratase
1 1 SCOP 102769 ATP-dependent protease Lon (La), catalytic domain
1 1 SCOP 102928 NifU/IscU domain
1 1 SCOP 102945 RelA/SpoT domain
1 1 SCOP 103040 CheC-like
1 1 SCOP 103264 Chorismate synthase, AroC
1 1 SCOP 109710 KorB DNA-binding domain-like
1 1 SCOP 109725 Conserved carboxylase domain
1 1 SCOP 109756 PhoU-like
1 1 SCOP 110309 Serine acetyltransferase
1 1 SCOP 110368 NeuB-like
1 1 SCOP 110388 MoCo biosynthesis proteins
1 1 SCOP 110513 IF2B-like
1 1 SCOP 110520 Methenyltetrahydrofolate synthetase
1 1 SCOP 110616 MTH1675-like
1 1 SCOP 110636 ROK
1 1 SCOP 111219 ArgJ-like
1 1 SCOP 111222 Bacterial S-adenosylmethionine decarboxylase
1 1 SCOP 111238 YfiH-like
1 1 SCOP 111305 Recombination protein RecR
1 1 SCOP 111322 AF1104-like
1 1 SCOP 111332 NAD kinase-like
1 1 SCOP 111338 QueA-like
1 1 SCOP 111343 CbiD-like
1 1 SCOP 116993 MazG-like
1 1 SCOP 117144 Flagellar hook protein flgE
1 1 SCOP 117458 FumA C-terminal domain-like
1 1 SCOP 117783 YbjQ-like
1 1 SCOP 117888 Ribosomal protein L16p
1 1 SCOP 140292 CodY HTH domain
1 1 SCOP 140479 LemA-like
1 1 SCOP 141092 Ribosomal protein L21p
1 1 SCOP 141131 Acetamidase/Formamidase-like
1 1 SCOP 141245 Ribosomal protein L19
1 1 SCOP 141368 UbiD middle domain-like
1 1 SCOP 141458 BH3618-like
1 1 SCOP 141723 LON domain-like
1 1 SCOP 141735 HisI-like
1 1 SCOP 141755 PdxS-like
1 1 SCOP 141942 Thi4-like
1 1 SCOP 142077 HTS-like
1 1 SCOP 142339 CofD-like
1 1 SCOP 142434 CinA-like
1 1 SCOP 142696 RibA-like
1 1 SCOP 142701 RibD C-terminal domain-like
1 1 SCOP 142735 DeoB catalytic domain-like
1 1 SCOP 142755 NadA-like
1 1 SCOP 142824 ComB-like
1 1 SCOP 143244 Nqo5-like
1 1 SCOP 143448 AMMECR1-like
1 1 SCOP 143745 GlcG-like
1 1 SCOP 143812 GatB/GatE catalytic domain-like
1 1 SCOP 143857 DeoB insert domain-like
1 1 SCOP 143976 lvD/EDD N-terminal domain-like
1 1 SCOP 144031 Nq06-like
1 1 SCOP 158600 MgsA/YrvN C-terminal domain-like
1 1 SCOP 159112 RNB domain-like
1 1 SCOP 159436 HI0933 N-terminal domain-like
1 1 SCOP 159444 SP0239-like
1 1 SCOP 159545 SorC sugar-binding domain-like
1 1 SCOP 159717 TTHA0179-like
1 1 SCOP 159720 mannose-1-phosphate guanylyl transferase
1 1 SCOP 159775 YerB-like
1 1 SCOP 160252 Iojap/YbeB-like
1 1 SCOP 160370 Ribosomal protein L10-like
1 1 SCOP 160538 SpoVG-like
1 1 SCOP 160566 DVU1097-like
1 1 SCOP 160883 CheD-like
1 1 SCOP 161094 MgtE membrane domain-like
1 1 SCOP 161112 Cation efflux protein transmembrane domain-like

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The following families have one or more weak hits:

SCOP family HI0933 insert domain-like
SCOP family SPO2555-like
SCOP family EscU C-terminal domain-like
SCOP family V-type ATPase subunit E
SCOP family Smr domain
SCOP family NIL domain-like
SCOP family GSPII protein E N-terminal domain-like
SCOP family Cation efflux protein cytoplasmic domain-like
SCOP family FlaG-like
SCOP family FdhD/NarQ
SCOP family CbiG N-terminal domain-like
SCOP family CobE/GbiG C-terminal domain-like
SCOP family DRTGG domain
SCOP family Imidazolonepropionase-like
SCOP family EutQ-like
SCOP family Guanosine diphospho-D-mannose pyrophosphorylase/mannose-6-phosphate isomerase linker domain
SCOP family PglD-like
SCOP family MLTA-like
SCOP family AlaX-M N-terminal domain-like
SCOP family EutN/CcmL-like
SCOP family HupF/HypC-like
SCOP family Trm112p-like
SCOP family MgtE N-terminal domain-like
SCOP family YheA-like
SCOP family DnaD domain
SCOP family HAMP domain
SCOP family IVS-encoded protein-like
SCOP family TM1646-like
SCOP family YznC-like
SCOP family Ribosomal protein L33p
SCOP family Ribosomal protein L32p
SCOP family Rhomboid-like
SCOP family Magnesium transport protein CorA, transmembrane region
SCOP family FdhE-like
SCOP family Type I restriction modification DNA specificity domain
SCOP family UbiD C-terminal domain-like
SCOP family YhfI-like
SCOP family CorA soluble domain-like
SCOP family Ribosomal protein L31p
SCOP family Ribosomal protein L28
SCOP family FwdE-like
SCOP family SerA intervening domain-like
SCOP family TRCF domain
SCOP family TTP0101/SSO1404-like
SCOP family BT0572-like
SCOP family Aspartokinase allosteric domain-like
SCOP family SP0238-like
SCOP family IlvH-like
SCOP family Acyl-ACP thioesterase-like
SCOP family YefM-like
SCOP family Ribosomal protein L35p
SCOP family Nqo1 middle domain-like
SCOP family YhhF-like
SCOP family N-6 DNA Methylase-like
SCOP family CoaX-like
SCOP family NQO2-like
SCOP family IlvD/EDD C-terminal domain-like
SCOP family EAL domain
SCOP family PP1699/LP2961-like
SCOP family RimM N-terminal domain-like
SCOP family RimM C-terminal domain-like
SCOP family CarD-like
SCOP family Glu-tRNAGln amidotransferase C subunit
SCOP family TTHA0727-like
SCOP family Fic-like
SCOP family HisE-like (PRA-PH)
SCOP family TyrA dimerization domain-like
SCOP family GatB/GatE C-terminal domain-like
SCOP family BAS1536-like
SCOP family Nqo1C-terminal domain-like
SCOP family HxlR-like
SCOP family FtsK C-terminal domain-like
SCOP family HSP33 redox switch-like
SCOP family RecO C-terminal domain-like
SCOP family TM1457-like
SCOP family YcfA-like
SCOP family CAC2371-like
SCOP family WrbA-like
SCOP family CsrA-like
SCOP family ProC C-terminal domain-like
SCOP family modified HD domain
SCOP family TrmE connector domain
SCOP family XseB-like
SCOP family PadR-like
SCOP family ScpB/YpuH-like
SCOP family TrkA C-terminal domain-like
SCOP family HlyD-like secretion proteins
SCOP family YfcE-like
SCOP family H-NOX domain
SCOP family HrcA C-terminal domain-like
SCOP family Hut operon positive regulatory protein HutP
SCOP family 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
SCOP family FabZ-like
SCOP family 3-demethylubiquinone-9 3-methyltransferase
SCOP family Gamma-glutamyl cyclotransferase-like
SCOP family ParB-like nuclease domain
SCOP family CbiX-like
SCOP family YeaZ-like
SCOP family Ppx/GppA phosphatase
SCOP family Trehalose-phosphatase
SCOP family Ribosomal L27 protein
SCOP family TF C-terminus
SCOP family YlxM/p13-like
SCOP family Heat-inducible transcription repressor HrcA, N-terminal domain
SCOP family DnaK suppressor protein DksA, alpha-hairpin domain
SCOP family Sec-C motif
SCOP family ClpX chaperone zinc binding domain
SCOP family Preprotein translocase SecY subunit
SCOP family Multidrug resistance efflux transporter EmrE
SCOP family Hypothetical protein TM0207
SCOP family Predicted metal-dependent hydrolase
SCOP family OmpA-like
SCOP family Aminomethyltransferase folate-binding domain
SCOP family Hypothetical protein TT1725
SCOP family Catalytic subunit of bi-partite nucleotidyltransferase
SCOP family Cell division protein ZapA-like
SCOP family Obg GTP-binding protein C-terminal domain
SCOP family Trigger factor ribosome-binding domain
SCOP family JAB1/MPN domain
SCOP family (Uracil-5-)-methyltransferase
SCOP family Ribosomal protein L11 methyltransferase PrmA
SCOP family Creatininase
SCOP family Transcriptional repressor Rex, C-terminal domain
SCOP family Oxygen-independent coproporphyrinogen III oxidase HemN
SCOP family Hypothetical protein MraZ
SCOP family Peptidoglycan hydrolase LytM
SCOP family Stabilizer of iron transporter SufD
SCOP family Hypothetical protein YwiB
SCOP family MOSC (MOCO sulphurase C-terminal) domain
SCOP family MTH1895
SCOP family TRAM domain
SCOP family Glucodextranase, domain C
SCOP family Anti-sigma factor FlgM
SCOP family DhaL-like
SCOP family Flagellar export chaperone FliS
SCOP family AmyC C-terminal domain-like
SCOP family FUR-like
SCOP family Penicillinase repressor
SCOP family Transcriptional repressor Rex, N-terminal domain
SCOP family Manganese catalase (T-catalase)
SCOP family Heat shock protein 70kD (HSP70), C-terminal subdomain
SCOP family FIS-like
SCOP family Lesion bypass DNA polymerase (Y-family), little finger domain
SCOP family Myosin rod fragments
SCOP family 2'-5' RNA ligase LigT
SCOP family YajQ-like
SCOP family DUF190/COG1993
SCOP family Ribosome-binding factor A, RbfA
SCOP family PaaI/YdiI-like
SCOP family Dodecin-like
SCOP family TAP-like
SCOP family YggJ N-terminal domain-like
SCOP family Kis/PemI addiction antidote
SCOP family HesB-like domain
SCOP family Collagen-binding domain
SCOP family HEPN domain
SCOP family LysR-like transcriptional regulators
SCOP family SirA-like
SCOP family PFOR Pyr module
SCOP family TK-like Pyr module
SCOP family Sigma4 domain
SCOP family Sigma3 domain
SCOP family Mechanosensitive channel protein MscS (YggB), transmembrane region
SCOP family MesJ substrate recognition domain-like
SCOP family Replication modulator SeqA, C-terminal DNA-binding domain
SCOP family Phosphoesterase-related
SCOP family GIY-YIG endonuclease
SCOP family Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
SCOP family Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
SCOP family Mechanosensitive channel protein MscS (YggB), C-terminal domain
SCOP family YbaB-like
SCOP family Precorrin-6Y methyltransferase (CbiT)
SCOP family Dehydratase-reactivating factor beta subunit
SCOP family ATP-dependent riboflavin kinase-like
SCOP family Heme chaperone CcmE
SCOP family Mechanosensitive channel protein MscS (YggB), middle domain
SCOP family N-utilization substance G protein NusG, C-terminal domain
SCOP family Double Clp-N motif
SCOP family Poly A polymerase C-terminal region-like
SCOP family Bacterial glucoamylase C-terminal domain-like
SCOP family Putative methyltransferase TM0872, insert domain
SCOP family Family 1 bi-partite nucleotidyltransferase subunit
SCOP family Chromosomal replication initiation factor DnaA C-terminal domain IV
SCOP family Calcium ATPase, transmembrane domain M
SCOP family Calcium ATPase, transduction domain A
SCOP family C-terminal, Zn-finger domain of MutM-like DNA repair proteins
SCOP family Middle domain of MutM-like DNA repair proteins
SCOP family N-terminal domain of MutM-like DNA repair proteins
SCOP family F1F0 ATP synthase subunit B, membrane domain
SCOP family F1F0 ATP synthase subunit A
SCOP family F1F0 ATP synthase subunit C
SCOP family Voltage-gated potassium channels
SCOP family DNA polymerase beta-like
SCOP family TGS domain
SCOP family Formate dehydrogenase N, cytochrome (gamma) subunit
SCOP family Siroheme synthase middle domains-like
SCOP family Hypothetical protein TM0269
SCOP family RNA 2'-O ribose methyltransferase substrate binding domain
SCOP family Tyrosyl-tRNA synthetase (TyrRS), C-terminal domain
SCOP family YhbC-like, N-terminal domain
SCOP family YjeE-like
SCOP family beta-Phosphoglucomutase-like
SCOP family Siroheme synthase N-terminal domain-like
SCOP family YhbC-like, C-terminal domain
SCOP family Pleiotropic translational regulator Hfq
SCOP family C-terminal fragment of elongation factor SelB
SCOP family CoA transferase alpha subunit-like
SCOP family Thymidylate synthase-complementing protein Thy1
SCOP family YggU-like
SCOP family Ribosome binding protein Y (YfiA homologue)
SCOP family Glutamyl tRNA-reductase catalytic, N-terminal domain
SCOP family Urease metallochaperone UreE, C-terminal domain
SCOP family Lrp/AsnC-like transcriptional regulator C-terminal domain
SCOP family HemD-like
SCOP family Molybdenum cofactor biosynthesis protein MoeB
SCOP family Alpha subunit of glutamate synthase, C-terminal domain
SCOP family Urease metallochaperone UreE, N-terminal domain
SCOP family RecG "wedge" domain
SCOP family PBP5 C-terminal domain-like
SCOP family Glutamyl tRNA-reductase dimerization domain
SCOP family 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
SCOP family Lrp/AsnC-like transcriptional regulator N-terminal domain
SCOP family Carbamilase
SCOP family DNA double-strand break repair nuclease
SCOP family Holo-(acyl carrier protein) synthase ACPS
SCOP family APH phosphotransferases
SCOP family YlxR-like
SCOP family Thiamin pyrophosphokinase, catalytic domain
SCOP family MoeA C-terminal domain-like
SCOP family Thiamin pyrophosphokinase, substrate-binding domain
SCOP family Cell-division inhibitor MinC, C-terminal domain
SCOP family YWTD domain
SCOP family Riboflavin synthase
SCOP family Chemotaxis protein CheA P1 domain
SCOP family TS-N domain
SCOP family MurE/MurF N-terminal domain
SCOP family Ferredoxin reductase FAD-binding domain-like
SCOP family MarR-like transcriptional regulators
SCOP family Coiled-coil domain of nucleotide exchange factor GrpE
SCOP family Tropomyosin
SCOP family DnaJ/Hsp40 cysteine-rich domain
SCOP family Ribosomal protein L36
SCOP family Desulforedoxin
SCOP family Rubredoxin
SCOP family Casein kinase II beta subunit
SCOP family Ribosomal protein S14
SCOP family Outer membrane efflux proteins (OEP)
SCOP family Colicin
SCOP family Penicillin binding protein dimerisation domain
SCOP family Glyoxalase II (hydroxyacylglutathione hydrolase)
SCOP family Penicillin V acylase
SCOP family Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
SCOP family FAD-linked oxidases, N-terminal domain
SCOP family ATP-dependent DNA ligase catalytic domain
SCOP family Nitrite and sulphite reductase 4Fe-4S domain-like
SCOP family DNA polymerase III, beta subunit
SCOP family Phosphoglucomutase, C-terminal domain
SCOP family Ornithine decarboxylase C-terminal domain
SCOP family Sporulation response regulatory protein Spo0B
SCOP family YbaK/ProRS associated domain
SCOP family MutT-like
SCOP family PR-1-like
SCOP family Heme-binding PAS domain
SCOP family GAF domain
SCOP family N-acetyl transferase, NAT
SCOP family Ribosomal protein L9 N-domain
SCOP family Ribosomal protein L9 C-domain
SCOP family NADH oxidase/flavin reductase
SCOP family FAD/NAD-linked reductases, dimerisation (C-terminal) domain
SCOP family Copper amine oxidase, domain N
SCOP family Homoserine dehydrogenase-like
SCOP family L30e/L7ae ribosomal proteins
SCOP family YjgF/L-PSP
SCOP family RNA polymerase alpha subunit dimerisation domain
SCOP family C-terminal domain of arginine repressor
SCOP family Cell division protein MinE topological specificity domain
SCOP family Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
SCOP family Ribosomal protein L30p/L7e
SCOP family Homoserine kinase
SCOP family CheY-binding domain of CheA
SCOP family Probable ACP-binding domain of malonyl-CoA ACP transacylase
SCOP family Bacterial exopeptidase dimerisation domain
SCOP family Phenylalanine metabolism regulatory domain
SCOP family HMA, heavy metal-associated domain
SCOP family Ribosomal protein S6
SCOP family Anticodon-binding domain of PheRS
SCOP family Acylphosphatase-like
SCOP family Canonical RBD
SCOP family Subtilase propeptides/inhibitors
SCOP family Single 4Fe-4S cluster ferredoxin
SCOP family GroEL-like chaperone, intermediate domain
SCOP family Eukaryotic type KH-domain (KH-domain type I)
SCOP family Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
SCOP family Ribosomal S5 protein, N-terminal domain
SCOP family Double-stranded RNA-binding domain (dsRBD)
SCOP family RecA protein, C-terminal domain
SCOP family AbrB N-terminal domain-like
SCOP family Ribosomal protein L7/12, C-terminal domain
SCOP family Pyrimidine nucleoside phosphorylase C-terminal domain
SCOP family NadC N-terminal domain-like
SCOP family Ribosomal protein S16
SCOP family GreA transcript cleavage factor, C-terminal domain
SCOP family Pilin
SCOP family Diaminopimelate epimerase
SCOP family Glutamine synthetase, N-terminal domain
SCOP family 2Fe-2S ferredoxin domains from multidomain proteins
SCOP family 2Fe-2S ferredoxin-related
SCOP family RNase P protein
SCOP family L23p
SCOP family Penicillin-binding protein 2x (pbp-2x), c-terminal domain
SCOP family LysM domain
SCOP family Bacterial muramidase, catalytic domain
SCOP family Phosphoglucomutase, first 3 domains
SCOP family Arylsulfatase
SCOP family AraD-like aldolase/epimerase
SCOP family Molybdenum cofactor biosynthesis protein MobA
SCOP family Chemotaxis receptor methyltransferase CheR, C-terminal domain
SCOP family COMT-like
SCOP family Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
SCOP family Integrin A (or I) domain
SCOP family Cofactor-dependent phosphoglycerate mutase
SCOP family Folylpolyglutamate synthetase, C-terminal domain
SCOP family Tetrahydrofolate dehydrogenase/cyclohydrolase
SCOP family LigB-like
SCOP family Hydrogenase maturating endopeptidase HybD
SCOP family DNA repair protein MutS, domain II
SCOP family MTH1175-like
SCOP family DnaQ-like 3'-5' exonuclease
SCOP family Creatinase/prolidase N-terminal domain
SCOP family Pyruvate kinase, C-terminal domain
SCOP family Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain
SCOP family Thioredoxin-like 2Fe-2S ferredoxin
SCOP family Thioltransferase
SCOP family Multidomain sulfurtransferase (rhodanese)
SCOP family Low-molecular-weight phosphotyrosine protein phosphatases
SCOP family Adenosine-5'phosphosulfate kinase (APS kinase)
SCOP family Shikimate kinase (AroK)
SCOP family D-Alanine ligase N-terminal domain
SCOP family Universal stress protein-like
SCOP family UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
SCOP family Dihydroorotate dehydrogenase B, PyrK subunit
SCOP family Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain
SCOP family Formate/glycerate dehydrogenases, substrate-binding domain
SCOP family Cobalamin (vitamin B12)-binding domain
SCOP family Initiation factor IF2/eIF5b, domain 3
SCOP family DNA ligase
SCOP family Anti-sigma factor antagonist SpoIIaa
SCOP family Group II chaperonin (CCT, TRIC), apical domain
SCOP family MurCD N-terminal domain
SCOP family N-terminal domain of adrenodoxin reductase-like
SCOP family FAD/NAD-linked reductases, N-terminal and central domains
SCOP family Methylenetetrahydrofolate reductase
SCOP family Uroporphyrinogen decarboxylase, UROD
SCOP family Type II chitinase
SCOP family Aldo-keto reductases (NADP)
SCOP family "Hypothetical" protein ybl036c
SCOP family Epsilon subunit of F1F0-ATP synthase N-terminal domain
SCOP family Type 1 signal peptidase
SCOP family LexA-related
SCOP family AFP III-like domain
SCOP family cAMP-binding domain
SCOP family CO-sensing protein CooA, N-terminal domain
SCOP family Head domain of nucleotide exchange factor GrpE
SCOP family Pyruvate kinase beta-barrel domain
SCOP family Ribosomal protein L25-like
SCOP family Post formyltransferase domain
SCOP family PNP-oxidase like
SCOP family ABC-transporter additional domain
SCOP family DNA ligase/mRNA capping enzyme postcatalytic domain
SCOP family Single strand DNA-binding domain, SSB
SCOP family DNA helicase RuvA subunit, N-terminal domain
SCOP family Anticodon-binding domain
SCOP family Staphylococcal nuclease
SCOP family eIF5a N-terminal domain-like
SCOP family Ribosomal proteins L24p and L21e
SCOP family SH3-domain
SCOP family FeoA-like
SCOP family Biotin repressor (BirA)
SCOP family FHA domain
SCOP family HSP20
SCOP family HSP40/DnaJ peptide-binding domain
SCOP family Invasin/intimin cell-adhesion fragments
SCOP family Purple acid phosphatase, N-terminal domain
SCOP family Fibronectin type III
SCOP family Group II chaperonin (CCT, TRIC), ATPase domain
SCOP family Tetracyclin repressor-like, C-terminal domain
SCOP family Tetratricopeptide repeat (TPR)
SCOP family Ribosomal protein L7/12, oligomerisation (N-terminal) domain
SCOP family Terpene synthases
SCOP family N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
SCOP family UDP-glucose/GDP-mannose dehydrogenase dimerisation domain
SCOP family HCDH C-domain-like
SCOP family C-terminal domain of glutamyl-tRNA synthetase (GluRS)
SCOP family Antitermination factor NusB
SCOP family GntR ligand-binding domain-like
SCOP family Iron-dependent repressor protein, dimerization domain
SCOP family N-terminal domain of the delta subunit of the F1F0-ATP synthase
SCOP family 5' to 3' exonuclease, C-terminal subdomain
SCOP family DNA polymerase beta, N-terminal domain-like
SCOP family DNA helicase RuvA subunit, middle domain
SCOP family Chemotaxis receptor methyltransferase CheR, N-terminal domain
SCOP family Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
SCOP family Methionine synthase domain
SCOP family Homodimeric domain of signal transducing histidine kinase
SCOP family Domain of the SRP/SRP receptor G-proteins
SCOP family Acyl-carrier protein (ACP)
SCOP family Hemerythrin-like
SCOP family Peptidoglycan binding domain, PGBD
SCOP family Ribosomal protein S20
SCOP family DNA-binding N-terminal domain of transcription activators
SCOP family Domains B1 and B5 of PheRS-beta, PheT
SCOP family DNA helicase RuvA subunit, C-terminal domain
SCOP family Ribosomal protein S18
SCOP family GerE-like (LuxR/UhpA family of transcriptional regulators)
SCOP family PhoB-like
SCOP family Iron-dependent repressor protein
SCOP family Helicase DNA-binding domain
SCOP family N-terminal domain of molybdate-dependent transcriptional regulator ModE
SCOP family GntR-like transcriptional regulators
SCOP family ArsR-like transcriptional regulators
SCOP family CAP C-terminal domain-like
SCOP family Arginine repressor (ArgR), N-terminal DNA-binding domain
SCOP family Methylated DNA-protein cysteine methyltransferase, C-terminal domain
SCOP family Tetracyclin repressor-like, N-terminal domain
SCOP family Epsilon subunit of F1F0-ATP synthase C-terminal domain
SCOP family C-terminal UvrC-binding domain of UvrB
SCOP family Phenylalanyl-tRNA synthetase (PheRS)
SCOP family Seryl-tRNA synthetase (SerRS)
SCOP family Ribosomal protein L29 (L29p)
SCOP family GreA transcript cleavage protein, N-terminal domain
SCOP family Dihydropyrimidine dehydrogenase, N-terminal domain

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.