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  Home > Genomes > Superfamily assignments for Helobdella robusta


Helobdella robusta superfamily assignments

Taxonomy
Taxonomy browser entry

Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Protostomia; Lophotrochozoa; Annelida; Clitellata; Hirudinea; Rhynchobdellida; Glossiphoniidae; Helobdella; Helobdella robusta

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Fasta format sequences
Domain assignments

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Assignment statistics

Sequences: 23432 total
12165 (52 %) with assignment
375 average length
35 % amino acid coverage
Domains: 18915 total
991 unique superfamilies
874 unique families
254 average length
19.1 average superfamily size
95 % formed by duplication
Domain combinations: 1074 domain pairs
3579 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies
738 605 151 12 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
620 617 25 2 SCOP 56219 DNase I-like
600 261 97 0 SCOP 48726 Immunoglobulin
593 283 54 0 SCOP 57667 beta-beta-alpha zinc fingers
512 508 103 3 SCOP 56112 Protein kinase-like (PK-like)
407 130 94 0 SCOP 57196 EGF/Laminin
343 95 39 0 SCOP 49313 Cadherin-like
326 302 82 4 SCOP 57850 RING/U-box
322 303 37 4 SCOP 46689 Homeodomain-like
313 230 59 1 SCOP 54928 RNA-binding domain, RBD
301 76 41 7 SCOP 81296 E set domains
263 223 69 15 SCOP 48371 ARM repeat
260 252 14 1 SCOP 81321 Family A G protein-coupled receptor-like
252 236 119 9 SCOP 50729 PH domain-like
246 154 42 1 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
239 198 52 4 SCOP 49785 Galactose-binding domain-like
237 214 53 1 SCOP 50978 WD40 repeat-like
216 105 66 1 SCOP 49265 Fibronectin type III
212 191 49 4 SCOP 47473 EF-hand
212 157 35 0 SCOP 81324 Voltage-gated potassium channels
209 195 54 2 SCOP 57903 FYVE/PHD zinc finger
208 57 31 0 SCOP 57424 LDL receptor-like module
202 180 18 3 SCOP 56436 C-type lectin-like
180 169 51 1 SCOP 48403 Ankyrin repeat
174 173 25 5 SCOP 53098 Ribonuclease H-like
169 106 59 1 SCOP 50156 PDZ domain-like
167 88 58 1 SCOP 57184 Growth factor receptor domain
149 141 12 1 SCOP 103473 MFS general substrate transporter
145 112 40 2 SCOP 48452 TPR-like
144 120 47 2 SCOP 52058 L domain-like
140 133 36 9 SCOP 46785 "Winged helix" DNA-binding domain
134 131 18 13 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
133 98 41 2 SCOP 49562 C2 domain (Calcium/lipid-binding domain, CaLB)
132 114 69 1 SCOP 50044 SH3-domain
130 129 36 9 SCOP 51735 NAD(P)-binding Rossmann-fold domains
127 125 25 4 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
119 117 5 1 SCOP 56496 Fibrinogen C-terminal domain-like
113 98 50 4 SCOP 54236 Ubiquitin-like
111 95 34 3 SCOP 52799 (Phosphotyrosine protein) phosphatases II
109 80 25 5 SCOP 52833 Thioredoxin-like
108 106 28 9 SCOP 54001 Cysteine proteinases
108 29 24 0 SCOP 82895 TSP-1 type 1 repeat
106 47 21 1 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
104 75 39 4 SCOP 49899 Concanavalin A-like lectins/glucanases
96 16 14 1 SCOP 46966 Spectrin repeat
94 94 12 0 SCOP 68906 SAP domain
92 92 9 11 SCOP 53474 alpha/beta-Hydrolases
92 91 25 2 SCOP 54695 POZ domain
89 67 32 3 SCOP 53300 vWA-like
85 84 9 0 SCOP 63712 Nicotinic receptor ligand binding domain-like
83 43 21 0 SCOP 49854 Spermadhesin, CUB domain
79 45 14 5 SCOP 53067 Actin-like ATPase domain
79 75 22 0 SCOP 57756 Retrovirus zinc finger-like domains
78 68 9 1 SCOP 47095 HMG-box
78 78 8 1 SCOP 90112 Neurotransmitter-gated ion-channel transmembrane pore
76 64 34 5 SCOP 50249 Nucleic acid-binding proteins
75 75 10 7 SCOP 53448 Nucleotide-diphospho-sugar transferases
73 69 30 1 SCOP 55550 SH2 domain
71 71 8 1 SCOP 47459 HLH, helix-loop-helix DNA-binding domain
70 69 18 8 SCOP 56784 HAD-like
64 59 12 1 SCOP 117281 Kelch motif
64 63 27 2 SCOP 48350 GTPase activation domain, GAP
62 62 26 1 SCOP 47576 Calponin-homology domain, CH-domain
61 61 5 2 SCOP 47113 Histone-fold
61 49 24 1 SCOP 51206 cAMP-binding domain-like
60 58 5 0 SCOP 48652 Tetraspanin
57 56 18 2 SCOP 50494 Trypsin-like serine proteases
57 11 10 0 SCOP 57535 Complement control module/SCR domain
57 55 16 0 SCOP 57414 Hairpin loop containing domain-like
56 44 23 0 SCOP 47769 SAM/Pointed domain
55 30 12 1 SCOP 47923 Ypt/Rab-GAP domain of gyp1p
54 52 30 1 SCOP 48065 DBL homology domain (DH-domain)
53 37 25 2 SCOP 63748 Tudor/PWWP/MBT
52 50 16 2 SCOP 52047 RNI-like
52 31 11 2 SCOP 47954 Cyclin-like
50 48 21 8 SCOP 51445 (Trans)glycosidases
47 47 21 3 SCOP 103657 BAR/IMD domain-like
46 45 4 1 SCOP 48264 Cytochrome P450
46 46 21 1 SCOP 46565 Chaperone J-domain
45 39 23 4 SCOP 51905 FAD/NAD(P)-binding domain
45 44 10 1 SCOP 55073 Nucleotide cyclase
44 44 12 1 SCOP 81665 Calcium ATPase, transmembrane domain M
44 24 17 0 SCOP 100895 Kazal-type serine protease inhibitors
42 41 6 6 SCOP 53383 PLP-dependent transferases
42 42 13 1 SCOP 53822 Periplasmic binding protein-like I
42 42 17 0 SCOP 81995 beta-sandwich domain of Sec23/24
41 41 11 3 SCOP 54495 UBC-like
41 32 21 1 SCOP 47370 Bromodomain
40 17 11 0 SCOP 49723 Lipase/lipooxygenase domain (PLAT/LH2 domain)
39 37 12 3 SCOP 51197 Clavaminate synthase-like
39 29 28 0 SCOP 57889 Cysteine-rich domain
38 36 20 0 SCOP 47986 DEATH domain
37 24 12 0 SCOP 90123 ABC transporter transmembrane region
37 24 8 0 SCOP 82185 Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
37 23 12 0 SCOP 57262 Leech antihemostatic proteins
36 36 14 1 SCOP 82199 SET domain
36 25 10 0 SCOP 50370 Ricin B-like lectins
36 36 16 1 SCOP 101898 NHL repeat
36 34 18 1 SCOP 47031 Second domain of FERM
35 35 10 1 SCOP 50630 Acid proteases
35 34 8 1 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
35 35 19 0 SCOP 57845 B-box zinc-binding domain
35 35 7 1 SCOP 48508 Nuclear receptor ligand-binding domain
35 35 9 1 SCOP 81653 Calcium ATPase, transduction domain A
34 32 3 1 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
34 33 6 1 SCOP 103506 Mitochondrial carrier
33 32 15 4 SCOP 56059 Glutathione synthetase ATP-binding domain-like
33 15 7 2 SCOP 55753 Actin depolymerizing proteins
33 33 18 1 SCOP 81383 F-box domain
33 30 23 0 SCOP 46934 UBA-like
32 32 10 4 SCOP 56300 Metallo-dependent phosphatases
32 22 14 2 SCOP 54768 dsRNA-binding domain-like
32 32 9 5 SCOP 49417 p53-like transcription factors
32 21 14 0 SCOP 51045 WW domain
31 29 11 2 SCOP 53850 Periplasmic binding protein-like II
31 17 14 1 SCOP 63825 YWTD domain
30 29 17 6 SCOP 54211 Ribosomal protein S5 domain 2-like
30 30 11 4 SCOP 53187 Zn-dependent exopeptidases
29 29 8 4 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
29 20 18 0 SCOP 52113 BRCT domain
27 27 10 2 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
27 24 14 0 SCOP 56487 SRCR-like
27 26 7 0 SCOP 57552 Blood coagulation inhibitor (disintegrin)
26 25 19 3 SCOP 52374 Nucleotidylyl transferase
26 23 8 1 SCOP 58038 SNARE fusion complex
26 21 10 1 SCOP 55785 PYP-like sensor domain (PAS domain)
26 26 10 3 SCOP 48464 ENTH/VHS domain
26 26 5 0 SCOP 57959 Leucine zipper domain
25 25 9 2 SCOP 52402 Adenine nucleotide alpha hydrolases-like
25 23 7 1 SCOP 56801 Acetyl-CoA synthetase-like
25 24 17 2 SCOP 50447 Translation proteins
24 21 11 1 SCOP 49764 HSP20-like chaperones
24 24 4 1 SCOP 51069 Carbonic anhydrase
24 24 5 1 SCOP 47413 lambda repressor-like DNA-binding domains
24 24 14 3 SCOP 81301 Nucleotidyltransferase
24 24 5 1 SCOP 55797 PR-1-like
24 23 15 2 SCOP 49879 SMAD/FHA domain
23 23 9 4 SCOP 64356 SNARE-like
23 23 3 1 SCOP 161070 SNF-like
23 23 10 1 SCOP 47616 GST C-terminal domain-like
23 17 10 0 SCOP 90229 CCCH zinc finger
22 22 18 2 SCOP 55681 Class II aaRS and biotin synthetases
22 22 4 2 SCOP 109604 HD-domain/PDEase-like
22 22 13 1 SCOP 64268 PX domain
22 16 8 1 SCOP 54631 CBS-domain pair
21 21 7 1 SCOP 55811 Nudix
21 21 7 3 SCOP 53254 Phosphoglycerate mutase-like
21 17 14 3 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
21 8 5 1 SCOP 63411 LuxS/MPP-like metallohydrolase
21 21 7 0 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
21 12 9 0 SCOP 64593 Intermediate filament protein, coiled coil region
20 20 4 2 SCOP 50182 Sm-like ribonucleoproteins
20 19 13 0 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
20 18 9 1 SCOP 48097 Regulator of G-protein signaling, RGS
20 18 13 2 SCOP 49599 TRAF domain-like
19 19 8 7 SCOP 51556 Metallo-dependent hydrolases
19 18 6 1 SCOP 81606 PP2C-like
19 18 10 1 SCOP 56399 ADP-ribosylation
19 19 9 1 SCOP 101447 Formin homology 2 domain (FH2 domain)
18 15 6 3 SCOP 52096 ClpP/crotonase
18 18 2 1 SCOP 47188 Hemerythrin-like
18 18 10 1 SCOP 81631 PAP/OAS1 substrate-binding domain
18 18 10 3 SCOP 54373 FAD-linked reductases, C-terminal domain
18 16 9 0 SCOP 57625 Invertebrate chitin-binding proteins
18 8 3 0 SCOP 57362 BPTI-like
18 10 8 0 SCOP 69179 Integrin domains
17 16 10 1 SCOP 50985 RCC1/BLIP-II
17 17 10 3 SCOP 56672 DNA/RNA polymerases
17 17 7 1 SCOP 50891 Cyclophilin-like
17 17 5 1 SCOP 57997 Tropomyosin
17 16 8 1 SCOP 69318 Integrin alpha N-terminal domain
17 17 8 1 SCOP 48366 Ras GEF
17 15 7 1 SCOP 101912 Sema domain
17 17 12 1 SCOP 56204 Hect, E3 ligase catalytic domain
16 16 10 2 SCOP 51695 PLC-like phosphodiesterases
16 16 3 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
16 15 12 3 SCOP 48239 Terpenoid cyclases/Protein prenyltransferases
16 16 3 1 SCOP 52266 SGNH hydrolase
16 16 1 1 SCOP 56574 Serpins
16 16 9 1 SCOP 52743 Subtilisin-like
16 15 7 0 SCOP 52200 Toll/Interleukin receptor TIR domain
16 13 5 0 SCOP 49842 TNF-like
16 16 5 1 SCOP 117892 Band 7/SPFH domain
16 15 5 1 SCOP 57501 Cystine-knot cytokines
16 4 3 1 SCOP 47220 alpha-catenin/vinculin-like
16 11 7 0 SCOP 89837 Doublecortin (DC)
16 4 4 1 SCOP 81698 FF domain
15 15 2 1 SCOP 81338 Aquaporin-like
15 13 7 1 SCOP 54534 FKBP-like
15 15 10 3 SCOP 55961 Bet v1-like
15 9 5 2 SCOP 53901 Thiolase-like
15 14 12 1 SCOP 82171 DPP6 N-terminal domain-like
15 15 6 0 SCOP 47090 PGBD-like
15 15 11 1 SCOP 57863 ArfGap/RecO-like zinc finger
15 11 9 0 SCOP 54160 Chromo domain-like
14 12 7 4 SCOP 100950 NagB/RpiA/CoA transferase-like
14 14 5 1 SCOP 52821 Rhodanese/Cell cycle control phosphatase
14 9 5 2 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
14 12 4 2 SCOP 53649 Alkaline phosphatase-like
14 8 7 0 SCOP 51126 Pectin lyase-like
14 13 9 1 SCOP 57783 Zinc beta-ribbon
14 12 6 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
14 14 5 1 SCOP 52490 Tubulin nucleotide-binding domain-like
14 11 6 2 SCOP 47203 Acyl-CoA dehydrogenase C-terminal domain-like
14 13 6 2 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
14 14 5 1 SCOP 52129 Caspase-like
14 14 7 0 SCOP 144232 HIT/MYND zinc finger-like
14 10 7 1 SCOP 74924 Cap-Gly domain
14 13 10 0 SCOP 101288 L27 domain
14 7 4 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
14 8 7 0 SCOP 75399 Plakin repeat
13 9 7 2 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
13 12 4 1 SCOP 53720 ALDH-like
13 12 5 2 SCOP 56281 Metallo-hydrolase/oxidoreductase
13 13 10 1 SCOP 63829 Calcium-dependent phosphotriesterase
13 10 4 2 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
13 13 5 0 SCOP 54897 Protease propeptides/inhibitors
13 13 8 1 SCOP 52151 FabD/lysophospholipase-like
13 10 8 0 SCOP 81901 HCP-like
13 13 6 0 SCOP 161111 Cation efflux protein transmembrane domain-like
13 13 10 3 SCOP 88697 PUA domain-like
13 13 7 0 SCOP 51011 Glycosyl hydrolase domain
13 13 4 1 SCOP 55307 Tubulin C-terminal domain-like
13 13 9 0 SCOP 74853 Lamin A/C globular tail domain
13 13 8 1 SCOP 48425 Sec7 domain
13 6 5 0 SCOP 50911 Mannose 6-phosphate receptor domain
13 12 7 1 SCOP 49758 Calpain large subunit, middle domain (domain III)
13 13 10 0 SCOP 158235 SOCS box-like
12 12 5 1 SCOP 50104 Translation proteins SH3-like domain
12 12 5 1 SCOP 55120 Pseudouridine synthase
12 12 7 2 SCOP 74650 Galactose mutarotase-like
12 12 7 1 SCOP 55856 Cytochrome b5-like heme/steroid binding domain
12 12 4 0 SCOP 144091 Rhomboid-like
12 11 11 1 SCOP 51230 Single hybrid motif
12 12 10 0 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
12 12 11 0 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
12 12 4 1 SCOP 47661 t-snare proteins
12 10 6 0 SCOP 118310 AN1-like Zinc finger
12 11 6 0 SCOP 57302 Snake toxin-like
12 12 7 0 SCOP 47391 Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
12 12 2 1 SCOP 47895 Transducin (alpha subunit), insertion domain
12 10 8 0 SCOP 57440 Kringle-like
11 9 6 2 SCOP 53271 PRTase-like
11 11 4 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
11 10 5 1 SCOP 50129 GroES-like
11 11 5 3 SCOP 56104 SAICAR synthase-like
11 11 8 0 SCOP 52954 Class II aaRS ABD-related
11 11 7 4 SCOP 52467 DHS-like NAD/FAD-binding domain
11 7 7 0 SCOP 90257 Myosin rod fragments
11 10 8 2 SCOP 52440 PreATP-grasp domain
11 11 4 2 SCOP 52029 GroEL apical domain-like
11 9 8 0 SCOP 90209 Ran binding protein zinc finger-like
11 10 5 1 SCOP 74788 Cullin repeat-like
11 11 4 1 SCOP 56854 Bcl-2 inhibitors of programmed cell death
11 11 7 1 SCOP 52087 CRAL/TRIO domain
11 6 2 0 SCOP 55394 Bactericidal permeability-increasing protein, BPI
10 8 5 2 SCOP 53613 Ribokinase-like
10 6 4 0 SCOP 81333 F1F0 ATP synthase subunit C
10 10 8 2 SCOP 52949 Macro domain-like
10 10 7 1 SCOP 88723 PIN domain-like
10 10 6 3 SCOP 54427 NTF2-like
10 10 4 5 SCOP 51182 RmlC-like cupins
10 10 5 2 SCOP 55931 Glutamine synthetase/guanido kinase
10 8 6 0 SCOP 141571 Pentapeptide repeat-like
10 10 5 2 SCOP 56645 Acyl-CoA dehydrogenase NM domain-like
10 10 3 0 SCOP 48592 GroEL equatorial domain-like
10 10 3 0 SCOP 54403 Cystatin/monellin
10 5 3 1 SCOP 54980 EF-G C-terminal domain-like
10 3 3 1 SCOP 50405 Actin-crosslinking proteins
10 10 3 3 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
10 10 5 1 SCOP 46774 ARID-like
10 9 8 1 SCOP 140741 RUN domain-like
10 8 4 1 SCOP 57933 TAZ domain
9 9 2 3 SCOP 51569 Aldolase
9 9 7 0 SCOP 111331 NAD kinase/diacylglycerol kinase-like
9 9 8 1 SCOP 55920 Creatinase/aminopeptidase
9 9 4 2 SCOP 55315 L30e-like
9 9 4 1 SCOP 56601 beta-lactamase/transpeptidase-like
9 9 4 1 SCOP 81340 Clc chloride channel
9 9 3 1 SCOP 55804 Phoshotransferase/anion transport protein
9 7 6 0 SCOP 47781 RuvA domain 2-like
9 9 2 1 SCOP 56327 LDH C-terminal domain-like
9 9 3 0 SCOP 101576 Supernatant protein factor (SPF), C-terminal domain
9 9 7 0 SCOP 49410 Alpha-macroglobulin receptor domain
9 6 5 1 SCOP 82109 MIR domain
9 8 5 0 SCOP 50784 Transcription factor IIA (TFIIA), beta-barrel domain
9 9 2 0 SCOP 54849 GroEL-intermediate domain like
8 7 5 3 SCOP 54197 HIT-like
8 4 1 1 SCOP 53784 Phosphofructokinase
8 8 5 0 SCOP 51161 Trimeric LpxA-like enzymes
8 8 7 0 SCOP 101908 Putative isomerase YbhE
8 8 1 1 SCOP 51430 NAD(P)-linked oxidoreductase
8 8 1 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
8 8 2 0 SCOP 46579 Prefoldin
8 8 4 1 SCOP 48208 Six-hairpin glycosidases
8 7 5 2 SCOP 46955 Putative DNA-binding domain
8 7 4 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
8 8 5 0 SCOP 52075 Outer arm dynein light chain 1
8 6 6 1 SCOP 158702 Sec63 N-terminal domain-like
8 3 3 1 SCOP 53738 Phosphoglucomutase, first 3 domains
8 8 6 1 SCOP 50923 Hemopexin-like domain
8 8 1 1 SCOP 48445 14-3-3 protein
8 8 5 0 SCOP 47676 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
8 7 4 1 SCOP 109905 Surp module (SWAP domain)
8 4 3 1 SCOP 109885 I/LWEQ domain
8 8 3 1 SCOP 103243 KA1-like
8 8 2 1 SCOP 63501 Frizzled cysteine-rich domain
8 8 2 1 SCOP 55003 PAP/Archaeal CCA-adding enzyme, C-terminal domain
8 4 2 1 SCOP 82615 Polo-box domain
8 8 8 1 SCOP 100909 IP3 receptor type 1 binding core, domain 2
7 7 5 2 SCOP 52317 Class I glutamine amidotransferase-like
7 7 5 2 SCOP 53137 Translational machinery components
7 5 5 0 SCOP 47060 S15/NS1 RNA-binding domain
7 7 5 1 SCOP 102114 Radical SAM enzymes
7 7 2 1 SCOP 56815 Sec1/munc18-like (SM) proteins
7 7 3 1 SCOP 144000 Oxysterol-binding protein-like
7 7 2 1 SCOP 49777 PEBP-like
7 7 5 1 SCOP 88713 Glycoside hydrolase/deacetylase
7 6 3 2 SCOP 52768 Arginase/deacetylase
7 7 4 2 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
7 7 7 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
7 7 5 0 SCOP 51338 Composite domain of metallo-dependent hydrolases
7 7 6 2 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
7 7 5 3 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
7 7 5 1 SCOP 48225 Seven-hairpin glycosidases
7 7 6 2 SCOP 63380 Riboflavin synthase domain-like
7 7 4 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
7 7 3 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
7 7 3 0 SCOP 46938 CRAL/TRIO N-terminal domain
7 6 3 1 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
7 7 4 3 SCOP 49348 Clathrin adaptor appendage domain
7 7 7 1 SCOP 54277 CAD & PB1 domains
7 7 4 0 SCOP 47396 Transcription factor IIA (TFIIA), alpha-helical domain
7 6 6 1 SCOP 116846 MIT domain
7 7 2 1 SCOP 75632 Cullin homology domain
7 7 3 0 SCOP 54368 Glutamine synthetase, N-terminal domain
7 5 5 0 SCOP 57603 FnI-like domain
7 2 2 0 SCOP 47862 Saposin
7 6 2 0 SCOP 55666 Ribonuclease PH domain 2-like
6 6 3 1 SCOP 53167 Purine and uridine phosphorylases
6 6 3 0 SCOP 57829 Zn-binding ribosomal proteins
6 6 2 2 SCOP 47240 Ferritin-like
6 6 1 2 SCOP 48557 L-aspartase-like
6 6 5 1 SCOP 54292 2Fe-2S ferredoxin-like
6 6 3 1 SCOP 56655 Carbohydrate phosphatase
6 6 4 1 SCOP 51395 FMN-linked oxidoreductases
6 6 3 2 SCOP 48576 Terpenoid synthases
6 6 1 1 SCOP 144122 Tim10-like
6 6 3 1 SCOP 47027 Acyl-CoA binding protein
6 6 4 1 SCOP 47819 HRDC-like
6 5 3 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
6 6 3 1 SCOP 143113 NAP-like
6 6 5 0 SCOP 75011 3-carboxy-cis,cis-mucoante lactonizing enzyme
6 5 3 0 SCOP 56024 Phospholipase D/nuclease
6 6 4 3 SCOP 100939 SPOC domain-like
6 5 5 2 SCOP 52777 CoA-dependent acyltransferases
6 3 3 0 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
6 4 2 1 SCOP 55979 DNA clamp
6 6 4 1 SCOP 56176 FAD-binding/transporter-associated domain-like
6 5 4 1 SCOP 51971 Nucleotide-binding domain
6 6 3 1 SCOP 55816 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
6 6 3 0 SCOP 49354 PapD-like
6 6 3 0 SCOP 90250 Troponin coil-coiled subunits
6 3 3 1 SCOP 49742 PHM/PNGase F
6 6 3 0 SCOP 111418 Hormone receptor domain
6 6 3 0 SCOP 48670 Transducin (heterotrimeric G protein), gamma chain
6 6 2 1 SCOP 47874 Annexin
6 6 2 1 SCOP 55455 SRF-like
6 6 6 0 SCOP 117839 WWE domain
6 6 4 1 SCOP 49447 Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
6 6 6 0 SCOP 143575 GAS2 domain-like
6 6 4 0 SCOP 140996 Hermes dimerisation domain
6 6 3 2 SCOP 89009 GAT-like domain
5 5 3 2 SCOP 53927 Cytidine deaminase-like
5 5 4 0 SCOP 55174 Alpha-L RNA-binding motif
5 5 3 1 SCOP 75217 alpha/beta knot
5 5 4 1 SCOP 52980 Restriction endonuclease-like
5 5 2 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
5 5 4 0 SCOP 55144 LigT-like
5 4 4 1 SCOP 56317 Carbon-nitrogen hydrolase
5 5 2 0 SCOP 55257 RBP11-like subunits of RNA polymerase
5 3 3 0 SCOP 55008 HMA, heavy metal-associated domain
5 5 4 0 SCOP 46458 Globin-like
5 4 3 0 SCOP 69065 RNase III domain-like
5 5 5 0 SCOP 55186 ThrRS/AlaRS common domain
5 1 1 0 SCOP 50199 Staphylococcal nuclease
5 5 3 0 SCOP 54654 CI-2 family of serine protease inhibitors
5 5 2 2 SCOP 48019 post-AAA+ oligomerization domain-like
5 5 5 0 SCOP 50965 Galactose oxidase, central domain
5 5 4 2 SCOP 55060 GHMP Kinase, C-terminal domain
5 4 3 1 SCOP 56042 PurM C-terminal domain-like
5 5 3 0 SCOP 57610 Thyroglobulin type-1 domain
5 4 3 1 SCOP 55326 PurM N-terminal domain-like
5 3 3 1 SCOP 55945 TATA-box binding protein-like
5 3 2 0 SCOP 101494 Stathmin
5 5 4 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
5 5 5 1 SCOP 81837 BEACH domain
5 5 5 0 SCOP 82708 R3H domain
5 5 2 1 SCOP 101152 Mob1/phocein
5 5 4 1 SCOP 56366 SMAD MH1 domain
5 5 5 1 SCOP 109993 VPS9 domain
5 5 3 1 SCOP 101690 PAZ domain
5 5 3 0 SCOP 56968 Lipovitellin-phosvitin complex; beta-sheet shell regions
5 5 4 1 SCOP 69012 alpha-ketoacid dehydrogenase kinase, N-terminal domain
5 5 4 0 SCOP 88688 Families 57/38 glycoside transferase middle domain
5 5 3 0 SCOP 47050 VHP, Villin headpiece domain
5 3 3 0 SCOP 57567 Serine protease inhibitors
5 5 2 0 SCOP 63763 SAND domain-like
5 5 2 2 SCOP 55711 Subdomain of clathrin and coatomer appendage domain
5 3 3 0 SCOP 90193 Notch domain
4 4 1 2 SCOP 52141 Uracil-DNA glycosylase-like
4 4 2 1 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
4 4 4 1 SCOP 52218 Flavoproteins
4 4 3 0 SCOP 110324 Ribosomal L27 protein-like
4 4 1 1 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
4 4 4 2 SCOP 54862 4Fe-4S ferredoxins
4 3 3 2 SCOP 48150 DNA-glycosylase
4 4 2 1 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
4 3 2 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
4 3 3 0 SCOP 110296 Oligoxyloglucan reducing end-specific cellobiohydrolase
4 4 3 2 SCOP 56634 Heme-dependent catalase-like
4 4 1 1 SCOP 52499 Isochorismatase-like hydrolases
4 4 1 1 SCOP 55909 Pentein
4 4 2 0 SCOP 81342 Transmembrane di-heme cytochromes
4 4 3 0 SCOP 101478 ADP-ribosylglycohydrolase
4 4 2 0 SCOP 52091 SpoIIaa-like
4 4 2 1 SCOP 53795 PEP carboxykinase-like
4 4 4 1 SCOP 55718 SCP-like
4 3 3 0 SCOP 48484 Lipoxigenase
4 4 4 1 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
4 4 3 0 SCOP 49503 Cupredoxins
4 4 2 0 SCOP 110857 Gamma-glutamyl cyclotransferase-like
4 4 2 1 SCOP 50800 PK beta-barrel domain-like
4 4 4 1 SCOP 103025 Folate-binding domain
4 4 4 0 SCOP 69322 Tricorn protease domain 2
4 4 1 1 SCOP 103196 Roadblock/LC7 domain
4 4 2 1 SCOP 51604 Enolase C-terminal domain-like
4 4 3 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
4 3 3 0 SCOP 158832 Tex N-terminal region-like
4 4 4 1 SCOP 51246 Rudiment single hybrid motif
4 4 3 0 SCOP 69989 C-terminal domain of PLC-beta
4 3 3 1 SCOP 159034 Mib/herc2 domain-like
4 3 3 0 SCOP 160481 BRK domain-like
4 4 2 1 SCOP 68923 PEP carboxykinase N-terminal domain
4 4 3 1 SCOP 52210 Succinyl-CoA synthetase domains
4 4 4 0 SCOP 48334 DNA repair protein MutS, domain III
4 4 4 0 SCOP 54171 DNA-binding domain
4 4 2 1 SCOP 54826 Enolase N-terminal domain-like
4 1 1 0 SCOP 49299 PKD domain
4 3 3 1 SCOP 103647 TSP type-3 repeat
4 4 1 0 SCOP 56973 Aerolisin/ETX pore-forming domain
4 4 3 1 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
4 4 3 1 SCOP 81271 TGS-like
4 4 3 1 SCOP 69000 FAD-dependent thiol oxidase
4 4 3 2 SCOP 158573 GINS helical bundle-like
4 3 2 0 SCOP 57924 Inhibitor of apoptosis (IAP) repeat
4 4 2 1 SCOP 82754 C-terminal, gelsolin-like domain of Sec23/24
4 4 3 0 SCOP 47454 A DNA-binding domain in eukaryotic transcription factors
4 3 3 1 SCOP 143791 DUSP-like
4 4 2 1 SCOP 47040 Kix domain of CBP (creb binding protein)
4 2 2 1 SCOP 47762 PAH2 domain
4 4 3 0 SCOP 140111 Endosomal sorting complex assembly domain
4 3 2 0 SCOP 54556 Chitinase insertion domain
4 4 3 1 SCOP 69340 C-terminal domain of adenylylcyclase associated protein
4 3 3 0 SCOP 103637 CCHHC domain
4 3 2 1 SCOP 140383 BSD domain-like
4 4 2 1 SCOP 81811 Helical domain of Sec23/24
4 4 2 0 SCOP 82919 Zn-finger domain of Sec23/24
4 4 4 1 SCOP 47587 Domain of poly(ADP-ribose) polymerase
3 3 3 1 SCOP 56808 Ribosomal protein L1
3 3 2 0 SCOP 46911 Ribosomal protein S18
3 2 2 1 SCOP 75304 Amidase signature (AS) enzymes
3 3 3 2 SCOP 53697 SIS domain
3 3 1 0 SCOP 54999 Ribosomal protein S10
3 3 1 1 SCOP 50193 Ribosomal protein L14
3 3 2 0 SCOP 52080 Ribosomal proteins L15p and L18e
3 3 1 2 SCOP 51658 Xylose isomerase-like
3 3 3 0 SCOP 47336 ACP-like
3 3 1 1 SCOP 53748 Phosphoglycerate kinase
3 3 2 0 SCOP 160369 Ribosomal protein L10-like
3 3 1 3 SCOP 51316 Mss4-like
3 3 3 1 SCOP 51730 FAD-linked oxidoreductase
3 2 2 1 SCOP 55205 EPT/RTPC-like
3 3 1 0 SCOP 82657 BolA-like
3 2 2 0 SCOP 54060 His-Me finger endonucleases
3 3 2 0 SCOP 55129 Ribosomal protein L30p/L7e
3 3 2 1 SCOP 48140 Ribosomal protein L19 (L19e)
3 3 3 1 SCOP 53328 Formyltransferase
3 3 2 1 SCOP 56019 The spindle assembly checkpoint protein mad2
3 3 3 0 SCOP 53639 AraD/HMP-PK domain-like
3 3 2 1 SCOP 52972 ITPase-like
3 3 1 1 SCOP 49329 Cu,Zn superoxide dismutase-like
3 2 2 1 SCOP 69645 Arp2/3 complex subunits
3 3 1 1 SCOP 111126 Ligand-binding domain in the NO signalling and Golgi transport
3 3 1 0 SCOP 47072 Cysteine alpha-hairpin motif
3 3 3 1 SCOP 55159 eIF1-like
3 3 3 0 SCOP 58113 Apolipoprotein A-I
3 3 1 1 SCOP 55418 eIF4e-like
3 3 1 1 SCOP 55770 Profilin (actin-binding protein)
3 3 1 1 SCOP 46924 RNA polymerase subunit RPB10
3 3 2 0 SCOP 161084 MAPEG domain-like
3 3 1 1 SCOP 51998 PFL-like glycyl radical enzymes
3 3 2 0 SCOP 102712 JAB1/MPN domain
3 2 2 1 SCOP 54909 Dimeric alpha+beta barrel
3 3 1 0 SCOP 111352 Ammonium transporter
3 3 1 0 SCOP 55331 Tautomerase/MIF
3 3 3 1 SCOP 50022 ISP domain
3 3 2 1 SCOP 50692 ADC-like
3 3 1 0 SCOP 143990 YbiA-like
3 2 2 2 SCOP 53218 Molybdenum cofactor biosynthesis proteins
3 3 3 0 SCOP 50242 TIMP-like
3 3 1 1 SCOP 54518 Tubby C-terminal domain-like
3 1 1 0 SCOP 82153 FAS1 domain
3 3 1 1 SCOP 50814 Lipocalins
3 3 2 1 SCOP 52309 N-(deoxy)ribosyltransferase-like
3 2 2 0 SCOP 50939 Sialidases
3 3 2 1 SCOP 56534 Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
3 3 1 1 SCOP 89124 Nop domain
3 3 3 2 SCOP 46548 alpha-helical ferredoxin
3 3 3 0 SCOP 143437 THUMP domain-like
3 3 2 1 SCOP 102462 Peptidyl-tRNA hydrolase II
3 3 3 0 SCOP 53092 Creatinase/prolidase N-terminal domain
3 3 3 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
3 3 2 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
3 3 2 0 SCOP 55103 FAD-linked oxidases, C-terminal domain
3 3 3 0 SCOP 58026 Delta-sleep-inducing peptide immunoreactive peptide
3 3 2 0 SCOP 54106 LysM domain
3 3 3 1 SCOP 142921 WGR domain-like
3 3 2 1 SCOP 52922 TK C-terminal domain-like
3 3 1 1 SCOP 142877 EndoU-like
3 3 1 1 SCOP 52935 PK C-terminal domain-like
3 1 1 1 SCOP 55973 S-adenosylmethionine synthetase
3 3 3 0 SCOP 49464 Carboxypeptidase regulatory domain-like
3 2 2 0 SCOP 161093 MgtE membrane domain-like
3 3 3 1 SCOP 140990 FtsH protease domain-like
3 3 2 0 SCOP 51101 Mannose-binding lectins
3 3 3 0 SCOP 117289 Nucleoporin domain
3 3 3 0 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
3 3 2 0 SCOP 48431 Lipovitellin-phosvitin complex, superhelical domain
3 2 2 1 SCOP 56053 Ribosomal protein L6
3 3 3 0 SCOP 55545 beta-N-acetylhexosaminidase-like domain
3 3 3 1 SCOP 55957 Phosphoglucomutase, C-terminal domain
3 3 2 1 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
3 2 2 0 SCOP 141072 CalX-like
3 3 1 1 SCOP 160696 BTG domain-like
3 3 1 1 SCOP 111347 Rap/Ran-GAP
3 3 2 1 SCOP 63570 PABC (PABP) domain
3 3 3 0 SCOP 103575 Plexin repeat
3 3 2 0 SCOP 47353 Retrovirus capsid dimerization domain-like
3 2 2 1 SCOP 110004 Glycolipid transfer protein, GLTP
3 3 1 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
3 3 3 1 SCOP 52025 PA domain
3 3 3 1 SCOP 47668 N-terminal domain of cbl (N-cbl)
3 3 2 1 SCOP 101233 PWI domain
3 1 1 0 SCOP 46585 HR1 repeat
3 3 1 0 SCOP 82927 Cysteine-rich DNA binding domain, (DM domain)
3 1 1 0 SCOP 57277 Granulin repeat
3 3 3 0 SCOP 110942 HSP90 C-terminal domain
3 3 2 1 SCOP 110993 eIF-2-alpha, C-terminal domain
3 3 2 0 SCOP 75553 Smc hinge domain
3 3 2 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
3 3 1 0 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
3 3 3 0 SCOP 46942 Elongation factor TFIIS domain 2
3 3 2 1 SCOP 48678 Moesin tail domain
3 2 2 0 SCOP 51156 Insect cysteine-rich antifreeze protein
3 3 2 1 SCOP 102031 AXH domain
3 3 3 0 SCOP 89811 Amyloid beta a4 protein copper binding domain (domain 2)
3 2 2 0 SCOP 110035 GDNF receptor-like
3 3 2 1 SCOP 63887 P-domain of calnexin/calreticulin
3 3 2 1 SCOP 54585 Cdc48 domain 2-like
3 3 3 0 SCOP 56491 A heparin-binding domain
3 3 2 1 SCOP 160219 AMPKBI-like
3 3 2 0 SCOP 109843 CAPPD, an extracellular domain of amyloid beta A4 protein
3 3 2 0 SCOP 140586 Dcp2 domain-like
3 3 1 1 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
3 3 3 0 SCOP 53150 DNA repair protein MutS, domain II
3 3 2 1 SCOP 47802 DNA polymerase beta, N-terminal domain-like
3 3 3 0 SCOP 140482 MAST3 pre-PK domain-like
3 3 2 0 SCOP 158230 PRP4-like
2 2 1 1 SCOP 47973 Ribosomal protein S7
2 2 2 2 SCOP 51366 Ribulose-phoshate binding barrel
2 2 2 1 SCOP 52166 Ribosomal protein L4
2 2 2 0 SCOP 54843 Ribosomal protein L22
2 2 1 1 SCOP 54686 Ribosomal protein L16p/L10e
2 1 1 0 SCOP 56214 4'-phosphopantetheinyl transferase
2 1 1 1 SCOP 53597 Dihydrofolate reductase-like
2 2 1 1 SCOP 75620 Release factor
2 2 1 0 SCOP 52161 Ribosomal protein L13
2 2 1 0 SCOP 89360 HesB-like domain
2 2 2 1 SCOP 51713 tRNA-guanine transglycosylase
2 2 2 1 SCOP 50715 Ribosomal protein L25-like
2 2 2 1 SCOP 52313 Ribosomal protein S2
2 2 2 1 SCOP 64005 Undecaprenyl diphosphate synthase
2 2 1 1 SCOP 55298 YjgF-like
2 2 2 2 SCOP 51419 PLP-binding barrel
2 2 2 1 SCOP 144217 CSL zinc finger
2 2 2 1 SCOP 48256 Citrate synthase
2 2 2 0 SCOP 48613 Heme oxygenase-like
2 2 1 1 SCOP 54762 Signal recognition particle alu RNA binding heterodimer, SRP9/14
2 2 1 0 SCOP 69500 DTD-like
2 2 2 0 SCOP 140718 Mediator hinge subcomplex-like
2 2 1 1 SCOP 53590 Nucleoside hydrolase
2 2 1 1 SCOP 54648 DLC
2 2 2 2 SCOP 46626 Cytochrome c
2 2 2 0 SCOP 63393 RNA polymerase subunits
2 2 2 1 SCOP 54506 Diaminopimelate epimerase-like
2 2 1 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
2 2 1 2 SCOP 90096 Subunits of heterodimeric actin filament capping protein Capz
2 2 1 1 SCOP 69103 Arp2/3 complex 16 kDa subunit ARPC5
2 2 1 0 SCOP 51306 LexA/Signal peptidase
2 2 1 1 SCOP 48439 Protein prenylyltransferase
2 1 1 1 SCOP 55781 GAF domain-like
2 2 1 1 SCOP 118203 Vacuolar ATP synthase subunit C
2 2 2 0 SCOP 161219 CHY zinc finger-like
2 2 2 1 SCOP 82282 Homocysteine S-methyltransferase
2 2 1 1 SCOP 47694 Cytochrome c oxidase subunit h
2 2 1 0 SCOP 81343 Fumarate reductase respiratory complex transmembrane subunits
2 2 1 0 SCOP 103486 V-type ATP synthase subunit C
2 2 2 0 SCOP 53032 tRNA-intron endonuclease catalytic domain-like
2 2 2 1 SCOP 56529 FAH
2 2 2 1 SCOP 64153 YjeF N-terminal domain-like
2 2 2 0 SCOP 81442 Cytochrome c oxidase subunit I-like
2 2 2 2 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
2 2 2 0 SCOP 69118 AhpD-like
2 2 2 1 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
2 2 2 1 SCOP 52016 LeuD/IlvD-like
2 2 2 1 SCOP 56349 DNA breaking-rejoining enzymes
2 2 2 0 SCOP 54736 ClpS-like
2 2 2 1 SCOP 53732 Aconitase iron-sulfur domain
2 2 2 1 SCOP 50993 Peptidase/esterase 'gauge' domain
2 2 2 1 SCOP 118215 Proton glutamate symport protein
2 2 2 0 SCOP 110069 ApaG-like
2 2 2 1 SCOP 52335 Methylglyoxal synthase-like
2 2 2 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
2 2 2 1 SCOP 52242 Cobalamin (vitamin B12)-binding domain
2 2 2 0 SCOP 50486 FMT C-terminal domain-like
2 2 2 0 SCOP 49452 Starch-binding domain-like
2 2 2 1 SCOP 47592 SWIB/MDM2 domain
2 2 2 0 SCOP 82704 AlbA-like
2 2 1 1 SCOP 74784 Translin
2 2 2 1 SCOP 50346 PRC-barrel domain
2 2 2 1 SCOP 111321 AF1104-like
2 2 2 1 SCOP 54984 eEF-1beta-like
2 2 1 1 SCOP 55287 RPB5-like RNA polymerase subunit
2 2 1 1 SCOP 56003 Molybdenum cofactor-binding domain
2 2 2 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
2 1 1 0 SCOP 55608 Homing endonucleases
2 2 2 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
2 2 2 0 SCOP 81336 F1F0 ATP synthase subunit A
2 2 2 0 SCOP 144206 NOB1 zinc finger-like
2 2 1 0 SCOP 158745 LanC-like
2 2 1 0 SCOP 160059 PriA/YqbF domain
2 2 2 0 SCOP 81464 Cytochrome c oxidase subunit II-like, transmembrane region
2 2 2 0 SCOP 141673 MOSC N-terminal domain-like
2 1 1 0 SCOP 51294 Hedgehog/intein (Hint) domain
2 2 1 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
2 2 1 0 SCOP 101967 Adhesin YadA, collagen-binding domain
2 2 1 0 SCOP 81585 PsbU/PolX domain-like
2 2 1 1 SCOP 110019 ERO1-like
2 2 1 1 SCOP 54665 CO dehydrogenase molybdoprotein N-domain-like
2 1 1 0 SCOP 54810 GMP synthetase C-terminal dimerisation domain
2 2 2 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
2 2 2 1 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
2 2 1 0 SCOP 55447 CO dehydrogenase flavoprotein C-terminal domain-like
2 2 2 0 SCOP 110836 Hypothetical protein SAV1430
2 2 1 1 SCOP 101887 Apyrase
2 2 2 0 SCOP 75689 Zinc-binding domain of translation initiation factor 2 beta
2 2 2 0 SCOP 100966 Translation initiation factor 2 beta, aIF2beta, N-terminal domain
2 2 1 1 SCOP 47741 CO dehydrogenase ISP C-domain like
2 1 1 1 SCOP 55116 Formiminotransferase domain of formiminotransferase-cyclodeaminase.
2 2 2 0 SCOP 47933 ERP29 C domain-like
2 2 1 0 SCOP 55031 Bacterial exopeptidase dimerisation domain
2 2 2 0 SCOP 48092 Transcription factor STAT-4 N-domain
2 2 2 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
2 1 1 1 SCOP 47446 Signal peptide-binding domain
2 2 2 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
2 2 2 0 SCOP 56994 Insulin-like
2 2 2 0 SCOP 50353 Cytokine
2 2 2 0 SCOP 57492 Trefoil
2 1 1 0 SCOP 63600 Telomeric repeat binding factor (TRF) dimerisation domain
2 2 2 0 SCOP 57256 Elafin-like
2 2 1 0 SCOP 47938 Functional domain of the splicing factor Prp18
2 2 1 0 SCOP 81601 Protein serine/threonine phosphatase 2C, C-terminal domain
2 2 1 1 SCOP 88798 N-terminal, heterodimerisation domain of RBP7 (RpoE)
2 2 2 1 SCOP 144074 E2F-DP heterodimerization region
2 2 1 1 SCOP 116907 Hook domain
2 2 1 0 SCOP 48340 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
2 2 2 0 SCOP 63451 LEM domain
2 2 2 0 SCOP 103107 Hypothetical protein c14orf129, hspc210
2 2 2 0 SCOP 63491 BAG domain
2 2 1 0 SCOP 90188 Somatomedin B domain
2 2 2 0 SCOP 57774 Microbial and mitochondrial ADK, insert "zinc finger" domain
2 2 2 0 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
2 2 2 0 SCOP 54511 GFP-like
2 2 2 0 SCOP 54747 Ribosomal L11/L12e N-terminal domain
2 2 1 1 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
2 2 2 1 SCOP 102848 NSFL1 (p97 ATPase) cofactor p47, SEP domain
2 2 1 0 SCOP 160527 V-type ATPase subunit E-like
2 2 1 0 SCOP 53036 Eukaryotic RPB5 N-terminal domain
2 2 2 1 SCOP 50916 Rap30/74 interaction domains
2 2 1 1 SCOP 90073 GCM domain
2 2 2 0 SCOP 118370 Vasodilator-stimulated phosphoprotein, VASP, tetramerisation domain
2 2 1 1 SCOP 110217 DNA-binding protein LAG-1 (CSL)
2 2 2 0 SCOP 143503 PUG domain-like
2 2 2 1 SCOP 56741 Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
2 2 2 0 SCOP 69687 Integrin beta tail domain
2 2 2 0 SCOP 55277 GYF domain
2 2 2 1 SCOP 158553 TAFH domain-like
2 2 2 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
2 2 1 1 SCOP 81327 Small-conductance potassium channel
2 2 2 0 SCOP 161245 Zinc hairpin stack
2 2 1 0 SCOP 140612 EB1 dimerisation domain-like
2 2 2 0 SCOP 64586 C-terminal domain of ProRS
2 2 2 0 SCOP 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
2 2 2 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
2 2 2 0 SCOP 158457 Orange domain-like
2 2 2 0 SCOP 101238 XPC-binding domain
2 2 2 1 SCOP 109880 A middle domain of Talin 1
1 1 1 1 SCOP 53790 Tetrapyrrole methylase
1 1 1 0 SCOP 89919 Ribosome-binding factor A, RbfA
1 1 1 0 SCOP 54570 Ribosomal protein S19
1 1 1 1 SCOP 55282 RL5-like
1 1 1 1 SCOP 56047 Ribosomal protein S8
1 1 1 1 SCOP 103491 Preprotein translocase SecY subunit
1 1 1 0 SCOP 57840 Ribosomal protein L36
1 1 1 0 SCOP 46946 S13-like H2TH domain
1 1 1 0 SCOP 64263 Prokaryotic ribosomal protein L17
1 1 1 0 SCOP 64182 DHH phosphoesterases
1 1 1 0 SCOP 74731 Ribosomal protein L20
1 1 1 1 SCOP 55831 Thymidylate synthase/dCMP hydroxymethylase
1 1 1 0 SCOP 141091 L21p-like
1 1 1 0 SCOP 143800 L28p-like
1 1 1 1 SCOP 82549 DAK1/DegV-like
1 1 1 1 SCOP 75625 YebC-like
1 1 1 1 SCOP 82649 SufE/NifU
1 1 1 1 SCOP 50324 Inorganic pyrophosphatase
1 1 1 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
1 1 1 1 SCOP 55068 Peptide methionine sulfoxide reductase
1 1 1 1 SCOP 51351 Triosephosphate isomerase (TIM)
1 1 1 0 SCOP 55194 Ribosome recycling factor, RRF
1 1 1 1 SCOP 55821 YrdC/RibB
1 1 1 1 SCOP 51283 dUTPase-like
1 1 1 1 SCOP 56770 HydA/Nqo6-like
1 1 1 1 SCOP 56276 S-adenosylmethionine decarboxylase
1 1 1 1 SCOP 54285 MoaD/ThiS
1 1 1 0 SCOP 102705 NIF3 (NGG1p interacting factor 3)-like
1 1 1 0 SCOP 64518 Phase 1 flagellin
1 1 1 0 SCOP 81452 Cytochrome c oxidase subunit III-like
1 1 1 0 SCOP 46561 Ribosomal protein L29 (L29p)
1 1 1 0 SCOP 54995 Ribosomal protein S6
1 1 1 1 SCOP 55387 Frataxin/Nqo15-like
1 1 1 0 SCOP 52042 Ribosomal protein L32e
1 1 1 1 SCOP 50475 FMN-binding split barrel
1 1 1 0 SCOP 141678 MAL13P1.257-like
1 1 1 0 SCOP 54575 Ribosomal protein L31e
1 1 1 1 SCOP 102886 Coproporphyrinogen III oxidase
1 1 1 1 SCOP 51726 UROD/MetE-like
1 1 1 0 SCOP 142897 TFB5-like
1 1 1 0 SCOP 103456 Preprotein translocase SecE subunit
1 1 1 1 SCOP 81524 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 1 SCOP 57798 Casein kinase II beta subunit
1 1 1 0 SCOP 111278 SSo0622-like
1 1 1 0 SCOP 81411 Mitochondrial cytochrome c oxidase subunit VIa
1 1 1 1 SCOP 81406 Mitochondrial cytochrome c oxidase subunit IV
1 1 1 0 SCOP 159468 AtpF-like
1 1 1 0 SCOP 81514 Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 1 SCOP 55248 PCD-like
1 1 1 0 SCOP 144210 Nop10-like SnoRNP
1 1 1 0 SCOP 89895 FYSH domain
1 1 1 1 SCOP 53774 Glutaminase/Asparaginase
1 1 1 0 SCOP 81508 Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 48662 Ribosomal protein L39e
1 1 1 1 SCOP 140959 Indolic compounds 2,3-dioxygenase-like
1 1 1 1 SCOP 48113 Heme-dependent peroxidases
1 1 1 1 SCOP 69060 Arp2/3 complex 21 kDa subunit ARPC3
1 1 1 0 SCOP 81427 Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
1 1 1 0 SCOP 143870 PF0523-like
1 1 1 0 SCOP 53056 beta-carbonic anhydrase, cab
1 1 1 0 SCOP 103111 Activator of Hsp90 ATPase, Aha1
1 1 1 1 SCOP 46988 Tubulin chaperone cofactor A
1 1 1 0 SCOP 69618 HemD-like
1 1 1 0 SCOP 143447 AMMECR1-like
1 1 1 0 SCOP 48690 Epsilon subunit of mitochondrial F1F0-ATP synthase
1 1 1 1 SCOP 63562 RPB6/omega subunit-like
1 1 1 1 SCOP 53800 Chelatase
1 1 1 1 SCOP 101546 ASF1-like
1 1 1 0 SCOP 49478 Cna protein B-type domain
1 1 1 0 SCOP 111038 YjbQ-like
1 1 1 1 SCOP 55040 Molybdenum cofactor biosynthesis protein C, MoaC
1 1 1 1 SCOP 143243 Nqo5-like
1 1 1 0 SCOP 51717 Dihydropteroate synthetase-like
1 1 1 0 SCOP 118196 YaeB-like
1 1 1 0 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
1 1 1 0 SCOP 82771 GIY-YIG endonuclease
1 1 1 0 SCOP 82697 PurS-like
1 1 1 1 SCOP 56524 Oxidoreductase molybdopterin-binding domain
1 1 1 0 SCOP 101744 Rof/RNase P subunit-like
1 1 1 0 SCOP 89550 PHP domain-like
1 1 1 1 SCOP 55166 Hedgehog/DD-peptidase
1 1 1 1 SCOP 89733 L-sulfolactate dehydrogenase-like
1 1 1 1 SCOP 55154 CYTH-like phosphatases
1 1 1 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
1 1 1 0 SCOP 54690 Molybdopterin synthase subunit MoaE
1 1 1 1 SCOP 54913 GlnB-like
1 1 1 0 SCOP 141000 Glu-tRNAGln amidotransferase C subunit
1 1 1 1 SCOP 56762 HydB/Nqo4-like
1 1 1 1 SCOP 103365 Hypothetical protein PH1602
1 1 1 0 SCOP 55200 Translation initiation factor IF3, C-terminal domain
1 1 1 0 SCOP 143081 BB1717-like
1 1 1 1 SCOP 54975 Acylphosphatase/BLUF domain-like
1 1 1 0 SCOP 158997 Trm112p-like
1 1 1 1 SCOP 82544 GckA/TtuD-like
1 1 1 1 SCOP 140804 YidB-like
1 1 1 1 SCOP 89028 Cobalamin adenosyltransferase-like
1 1 1 0 SCOP 51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
1 1 1 0 SCOP 109910 YgfY-like
1 1 1 0 SCOP 49472 Transthyretin (synonym: prealbumin)
1 1 1 1 SCOP 110916 Peptidyl-tRNA hydrolase domain-like
1 1 1 0 SCOP 102588 LmbE-like
1 1 1 1 SCOP 89796 CoA-transferase family III (CaiB/BaiF)
1 1 1 0 SCOP 160909 ATP12-like
1 1 1 0 SCOP 56747 Prim-pol domain
1 1 1 0 SCOP 48295 TrpR-like
1 1 1 0 SCOP 140931 Fic-like
1 1 1 0 SCOP 101262 Methenyltetrahydrofolate cyclohydrolase-like
1 1 1 1 SCOP 56821 Prismane protein-like
1 1 1 0 SCOP 57802 Rubredoxin-like
1 1 1 0 SCOP 55021 ACT-like
1 1 1 0 SCOP 117457 FumA C-terminal domain-like
1 1 1 1 SCOP 56507 Methionine synthase activation domain-like
1 1 1 0 SCOP 53182 Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
1 1 1 1 SCOP 51703 Cobalamin (vitamin B12)-dependent enzymes
1 1 1 0 SCOP 101473 DhaL-like
1 1 1 1 SCOP 111326 Urocanase
1 1 1 0 SCOP 159659 Cgl1923-like
1 1 1 0 SCOP 64076 MTH938-like
1 1 1 0 SCOP 81593 Nucleotidyltransferase substrate binding subunit/domain
1 1 1 1 SCOP 110395 CutC-like
1 1 1 1 SCOP 56726 DNA topoisomerase IV, alpha subunit
1 1 1 0 SCOP 160631 SMI1/KNR4-like
1 1 1 0 SCOP 102546 RbsD-like
1 1 1 1 SCOP 46950 Double-stranded DNA-binding domain
1 1 1 0 SCOP 69819 MTH1598-like
1 1 1 0 SCOP 116820 Rps17e-like
1 1 1 0 SCOP 160374 RplX-like
1 1 1 1 SCOP 69695 SRP19
1 1 1 0 SCOP 63867 MoeA C-terminal domain-like
1 1 1 1 SCOP 55895 Ribonuclease Rh-like
1 1 1 1 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
1 1 1 0 SCOP 46589 tRNA-binding arm
1 1 1 0 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
1 1 1 1 SCOP 69336 Alpha subunit of glutamate synthase, C-terminal domain
1 1 1 0 SCOP 53706 Formate dehydrogenase/DMSO reductase, domains 1-3
1 1 1 0 SCOP 50960 TolB, C-terminal domain
1 1 1 0 SCOP 48619 Phospholipase A2, PLA2
1 1 1 0 SCOP 58042 Outer membrane lipoprotein
1 1 1 1 SCOP 82114 Riboflavin kinase-like
1 1 1 0 SCOP 141255 YccV-like
1 1 1 1 SCOP 102645 CoaB-like
1 1 1 0 SCOP 58104 Methyl-accepting chemotaxis protein (MCP) signaling domain
1 1 1 0 SCOP 54821 Ribosomal protein S3 C-terminal domain
1 1 1 1 SCOP 56719 Type II DNA topoisomerase
1 1 1 0 SCOP 49468 VHL
1 1 1 0 SCOP 118116 DNA mismatch repair protein MutL
1 1 1 0 SCOP 49384 Carbohydrate-binding domain
1 1 1 1 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
1 1 1 0 SCOP 55658 L9 N-domain-like
1 1 1 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
1 1 1 0 SCOP 56037 PheT/TilS domain
1 1 1 0 SCOP 48056 Di-copper centre-containing domain
1 1 1 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
1 1 1 1 SCOP 63999 Thiamin pyrophosphokinase, catalytic domain
1 1 1 0 SCOP 58022 XRCC4, C-terminal oligomerization domain
1 1 1 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
1 1 1 1 SCOP 50621 Alanine racemase C-terminal domain-like
1 1 1 0 SCOP 110111 Ctag/Cox11
1 1 1 1 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
1 1 1 0 SCOP 49363 Purple acid phosphatase, N-terminal domain
1 1 1 1 SCOP 53623 MurD-like peptide ligases, catalytic domain
1 1 1 1 SCOP 81891 Poly A polymerase C-terminal region-like
1 1 1 0 SCOP 53920 Fe-only hydrogenase
1 1 1 0 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
1 1 1 0 SCOP 52279 Beta-D-glucan exohydrolase, C-terminal domain
1 1 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
1 1 1 0 SCOP 90002 Hypothetical protein YjiA, C-terminal domain
1 1 1 0 SCOP 47144 HSC20 (HSCB), C-terminal oligomerisation domain
1 1 1 1 SCOP 63882 MoeA N-terminal region -like
1 1 1 1 SCOP 55637 Cell cycle regulatory proteins
1 1 1 1 SCOP 101278 N-terminal domain of adenylylcyclase associated protein, CAP
1 1 1 0 SCOP 140860 Pseudo ankyrin repeat-like
1 1 1 0 SCOP 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
1 1 1 0 SCOP 54782 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
1 1 1 0 SCOP 140490 Nqo1C-terminal domain-like
1 1 1 0 SCOP 144284 Sec2 N-terminal region
1 1 1 1 SCOP 56542 Substrate-binding domain of HMG-CoA reductase
1 1 1 0 SCOP 54991 Anticodon-binding domain of PheRS
1 1 1 0 SCOP 55271 DNA repair protein MutS, domain I
1 1 1 0 SCOP 110221 AbfB domain
1 1 1 1 SCOP 116742 eIF2alpha middle domain-like
1 1 1 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
1 1 1 0 SCOP 46596 Eukaryotic DNA topoisomerase I, dispensable insert domain
1 1 1 0 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
1 1 1 0 SCOP 111357 Mitochondrial ATP synthase coupling factor 6
1 1 1 0 SCOP 81790 Myosin phosphatase inhibitor 17kDa protein, CPI-17
1 1 1 1 SCOP 89817 Mago nashi protein
1 1 1 1 SCOP 47798 Barrier-to-autointegration factor, BAF
1 1 1 0 SCOP 81415 Mitochondrial cytochrome c oxidase subunit VIc
1 1 1 0 SCOP 118359 Expressed protein At2g23090/F21P24.15
1 1 1 0 SCOP 57288 Midkine
1 1 1 0 SCOP 50723 Core binding factor beta, CBF
1 1 1 0 SCOP 81419 Mitochondrial cytochrome c oxidase subunit VIIa
1 1 1 0 SCOP 49303 beta-Galactosidase/glucuronidase domain
1 1 1 1 SCOP 140984 PTPA-like
1 1 1 1 SCOP 75001 Dipeptidyl peptidase I (cathepsin C), exclusion domain
1 1 1 1 SCOP 55481 N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
1 1 1 1 SCOP 143724 PHP14-like
1 1 1 0 SCOP 50084 Myosin S1 fragment, N-terminal domain
1 1 1 1 SCOP 63707 Ganglioside M2 (gm2) activator
1 1 1 0 SCOP 111006 Dystroglycan, domain 2
1 1 1 0 SCOP 161065 ATP synthase D chain-like
1 1 1 0 SCOP 81730 beta-catenin-interacting protein ICAT
1 1 1 1 SCOP 140102 ISY1 domain-like
1 1 1 1 SCOP 47672 Transferrin receptor-like dimerisation domain
1 1 1 0 SCOP 81531 Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 140106 Calcyclin-binding protein-like
1 1 1 0 SCOP 140864 TROVE domain-like
1 1 1 1 SCOP 47216 Proteasome activator
1 1 1 1 SCOP 143875 ERH-like
1 1 1 0 SCOP 64602 F1 ATPase inhibitor, IF1, C-terminal domain
1 1 1 0 SCOP 140361 MIT domain-like
1 1 1 1 SCOP 48479 Cytochrome c oxidase subunit E
1 1 1 1 SCOP 142019 Nqo1 FMN-binding domain-like
1 1 1 0 SCOP 57586 TNF receptor-like
1 1 1 0 SCOP 55261 GAD domain-like
1 1 1 1 SCOP 109925 Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain
1 1 1 1 SCOP 54529 Mitochondrial glycoprotein MAM33-like
1 1 1 0 SCOP 49606 Neurophysin II
1 1 1 0 SCOP 161060 ATP synthase B chain-like
1 1 1 1 SCOP 89942 eEF1-gamma domain
1 1 1 1 SCOP 143885 RGC domain-like
1 1 1 0 SCOP 47912 Wiscott-Aldrich syndrome protein, WASP, C-terminal domain
1 1 1 1 SCOP 82215 C-terminal autoproteolytic domain of nucleoporin nup98
1 1 1 0 SCOP 109715 DEK C-terminal domain
1 1 1 1 SCOP 47157 Mitochondrial import receptor subunit Tom20
1 1 1 1 SCOP 50989 Clathrin heavy-chain terminal domain
1 1 1 0 SCOP 81822 RuBisCo LSMT C-terminal, substrate-binding domain
1 1 1 1 SCOP 101391 Hsp90 co-chaperone CDC37
1 1 1 1 SCOP 47212 FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
1 1 1 1 SCOP 81382 Skp1 dimerisation domain-like
1 1 1 0 SCOP 140427 VPS28 C-terminal domain-like
1 1 1 0 SCOP 69099 Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain
1 1 1 0 SCOP 81872 BRCA2 helical domain
1 1 1 0 SCOP 159065 Dom34/Pelota N-terminal domain-like
1 1 1 0 SCOP 89000 post-HMGL domain-like
1 1 1 1 SCOP 159042 Plus3-like
1 1 1 1 SCOP 88802 Pre-PUA domain
1 1 1 0 SCOP 47655 STAT
1 1 1 0 SCOP 68993 FAT domain of focal adhesion kinase
1 1 1 1 SCOP 63862 Thiamin pyrophosphokinase, substrate-binding domain
1 1 1 0 SCOP 102860 mRNA decapping enzyme DcpS N-terminal domain
1 1 1 0 SCOP 101420 C-terminal domain of Ku80
1 1 1 0 SCOP 160897 Taf5 N-terminal domain-like
1 1 1 0 SCOP 116878 TrmE connector domain
1 1 1 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 160651 FLJ32549 C-terminal domain-like
1 1 1 1 SCOP 55035 NAD-binding domain of HMG-CoA reductase
1 1 1 0 SCOP 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain
1 1 1 0 SCOP 101790 Aminomethyltransferase beta-barrel domain
1 1 1 0 SCOP 81496 Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
1 1 1 0 SCOP 81502 ISP transmembrane anchor
1 1 1 0 SCOP 111479 Fzo-like conserved region
1 1 1 1 SCOP 63433 Fumarylacetoacetate hydrolase, FAH, N-terminal domain
1 1 1 1 SCOP 47644 Methionine synthase domain
1 1 1 0 SCOP 101821 Aminopeptidase/glucanase lid domain
1 1 1 0 SCOP 81799 Putative methyltransferase TM0872, insert domain
1 1 1 1 SCOP 101224 HAND domain of the nucleosome remodeling ATPase ISWI
1 1 1 1 SCOP 160088 NRDP1 C-terminal domain-like
1 1 1 0 SCOP 109732 HBS1-like domain
1 1 1 0 SCOP 47055 TAF(II)230 TBP-binding fragment
1 1 1 0 SCOP 109728 Hypothetical protein AF0491, middle domain
1 1 1 0 SCOP 46915 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
1 1 1 0 SCOP 109736 FGAM synthase PurL, linker domain
1 1 1 0 SCOP 140914 PriB N-terminal domain-like
1 1 1 0 SCOP 57770 Methionyl-tRNA synthetase (MetRS), Zn-domain
1 1 1 0 SCOP 52913 RNA 3'-terminal phosphate cyclase, RPTC, insert domain
1 1 1 0 SCOP 140125 Rabenosyn-5 Rab-binding domain-like
1 1 1 0 SCOP 47719 p53 tetramerization domain
1 1 1 0 SCOP 90234 Zinc finger domain of DNA polymerase-alpha
1 1 1 0 SCOP 101283 GRIP domain
1 1 1 0 SCOP 103652 G protein-binding domain
1 1 1 1 SCOP 158548 FLJ32549 domain-like

Jump to [ Top of page · Assignment statistics ]


The following superfamilies have one or more weak hits:

SCOP superfamily Dimerization motif of sir4
SCOP superfamily Hypothetical protein Yml108w
SCOP superfamily YajQ-like
SCOP superfamily Inhibitor of vertebrate lysozyme, Ivy
SCOP superfamily Prokaryotic lipoproteins and lipoprotein localization factors
SCOP superfamily Fucose-specific lectin
SCOP superfamily Gametocyte protein Pfg27
SCOP superfamily N-terminal, cytoplasmic domain of anti-sigmaE factor RseA
SCOP superfamily Sigma2 domain of RNA polymerase sigma factors
SCOP superfamily Sigma3 and sigma4 domains of RNA polymerase sigma factors
SCOP superfamily Positive stranded ssRNA viruses
SCOP superfamily Apolipoprotein A-II
SCOP superfamily Tumor suppressor gene product Apc
SCOP superfamily Apical membrane antigen 1
SCOP superfamily MesJ substrate recognition domain-like
SCOP superfamily N-utilization substance G protein NusG, N-terminal domain
SCOP superfamily SEA domain
SCOP superfamily BAH domain
SCOP superfamily Calcium-mediated lectin
SCOP superfamily Tp47 lipoprotein, middle and C-terminal domains
SCOP superfamily N-terminal domain of bifunctional PutA protein
SCOP superfamily Helical scaffold and wing domains of SecA
SCOP superfamily BRCA2 tower domain
SCOP superfamily Family 10 polysaccharide lyase
SCOP superfamily Crustacean CHH/MIH/GIH neurohormone
SCOP superfamily Pre-protein crosslinking domain of SecA
SCOP superfamily Group V grass pollen allergen
SCOP superfamily F1F0 ATP synthase subunit B, membrane domain
SCOP superfamily Subunit VIII of photosystem I reaction centre, PsaI
SCOP superfamily ABC transporter involved in vitamin B12 uptake, BtuC
SCOP superfamily Gated mechanosensitive channel
SCOP superfamily H-NS histone-like proteins
SCOP superfamily Rad50 coiled-coil Zn hook
SCOP superfamily Chemotaxis phosphatase CheZ
SCOP superfamily Mitotic arrest deficient-like 1, Mad1
SCOP superfamily DsrEFH-like
SCOP superfamily Arabinanase/levansucrase/invertase
SCOP superfamily V-region of surface antigen I/II (SA I/II, PAC)
SCOP superfamily Eea1 homodimerisation domain
SCOP superfamily Head and neck region of the ectodomain of NDV fusion glycoprotein
SCOP superfamily Membrane penetration protein mu1
SCOP superfamily NSP3 homodimer
SCOP superfamily LCCL domain
SCOP superfamily Ribosome binding protein Y (YfiA homologue)
SCOP superfamily Transcription factor NusA, N-terminal domain
SCOP superfamily DNA-binding C-terminal domain of the transcription factor MotA
SCOP superfamily Type III secretory system chaperone-like
SCOP superfamily Cell wall binding repeat
SCOP superfamily Phage fibre proteins
SCOP superfamily Tricorn protease N-terminal domain
SCOP superfamily Phage tail proteins
SCOP superfamily Nucleoplasmin-like core domain
SCOP superfamily Nuclear receptor coactivator interlocking domain
SCOP superfamily Glutamyl tRNA-reductase dimerization domain
SCOP superfamily Anti-sigma factor AsiA
SCOP superfamily RecG, N-terminal domain
SCOP superfamily Rho N-terminal domain-like
SCOP superfamily Outer capsid protein sigma 3
SCOP superfamily CNF1/YfiH-like putative cysteine hydrolases
SCOP superfamily 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
SCOP superfamily Ribonuclease domain of colicin E3
SCOP superfamily Sortase
SCOP superfamily PTS-regulatory domain, PRD
SCOP superfamily Outer surface protein C (OspC)
SCOP superfamily Oligomerization domain of hepatitis delta antigen
SCOP superfamily Bacterial hemolysins
SCOP superfamily Colicin Ia, N-terminal domain
SCOP superfamily Clostridium neurotoxins, "coiled-coil" domain
SCOP superfamily Variant surface glycoprotein (N-terminal domain)
SCOP superfamily Virus ectodomain
SCOP superfamily Influenza hemagglutinin (stalk)
SCOP superfamily N-terminal coiled coil domain from apc
SCOP superfamily Fibritin
SCOP superfamily Multimerization domain of the phosphoprotein from sendai virus
SCOP superfamily Rotavirus nonstructural proteins
SCOP superfamily Coiled-coil dimerization domain from cortexillin I
SCOP superfamily Fibrinogen coiled-coil and central regions
SCOP superfamily Assembly domain of cartilage oligomeric matrix protein
SCOP superfamily Chicken cartilage matrix protein
SCOP superfamily Trimerization domain of TRAF
SCOP superfamily Zinc domain conserved in yeast copper-regulated transcription factors
SCOP superfamily Ferredoxin thioredoxin reductase (FTR), catalytic beta chain
SCOP superfamily HIPIP (high potential iron protein)
SCOP superfamily Carboxypeptidase inhibitor
SCOP superfamily Antifungal protein (AGAFP)
SCOP superfamily Heparin-binding domain from vascular endothelial growth factor
SCOP superfamily TB module/8-cys domain
SCOP superfamily Methylamine dehydrogenase, L chain
SCOP superfamily Crambin-like
SCOP superfamily Colipase-like
SCOP superfamily Scorpion toxin-like
SCOP superfamily Anthrax protective antigen
SCOP superfamily Perfringolysin
SCOP superfamily Outer membrane efflux proteins (OEP)
SCOP superfamily Porins
SCOP superfamily OMPA-like
SCOP superfamily delta-Endotoxin (insectocide), N-terminal domain
SCOP superfamily Colicin
SCOP superfamily Replication terminator protein (Tus)
SCOP superfamily gp120 core
SCOP superfamily N-acetylmuramoyl-L-alanine amidase-like
SCOP superfamily tRNA-intron endonuclease N-terminal domain-like
SCOP superfamily RuBisCO, small subunit
SCOP superfamily Pepsin inhibitor-3
SCOP superfamily Probable bacterial effector-binding domain
SCOP superfamily 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
SCOP superfamily Translational regulator protein regA
SCOP superfamily TRADD, N-terminal domain
SCOP superfamily RuBisCO, large subunit, small (N-terminal) domain
SCOP superfamily Chalcone isomerase
SCOP superfamily Colicin E3 immunity protein
SCOP superfamily Pili subunits
SCOP superfamily ssDNA-binding transcriptional regulator domain
SCOP superfamily Amine oxidase N-terminal region
SCOP superfamily Translation initiation factor IF3, N-terminal domain
SCOP superfamily Superantigen toxins, C-terminal domain
SCOP superfamily Interleukin 8-like chemokines
SCOP superfamily Prion-like
SCOP superfamily RNase A-like
SCOP superfamily Microbial ribonucleases
SCOP superfamily "Helical backbone" metal receptor
SCOP superfamily Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
SCOP superfamily B12-dependent dehydatase associated subunit
SCOP superfamily Phosphotyrosine protein phosphatases I
SCOP superfamily Cryptochrome/photolyase, N-terminal domain
SCOP superfamily CheY-like
SCOP superfamily Glycosyl hydrolases family 6, cellulases
SCOP superfamily Thiamin phosphate synthase
SCOP superfamily E2 regulatory, transactivation domain
SCOP superfamily Cyanovirin-N
SCOP superfamily Tlp20, baculovirus telokin-like protein
SCOP superfamily An insect antifreeze protein
SCOP superfamily beta-Roll
SCOP superfamily delta-Endotoxin (insectocide), middle domain
SCOP superfamily Nitrous oxide reductase, N-terminal domain
SCOP superfamily Thermostable phytase (3-phytase)
SCOP superfamily beta-Barrel protease inhibitors
SCOP superfamily Herpes virus serine proteinase, assemblin
SCOP superfamily Barwin-like endoglucanases
SCOP superfamily STI-like
SCOP superfamily Agglutinin
SCOP superfamily Electron transport accessory proteins
SCOP superfamily EV matrix protein
SCOP superfamily Amine oxidase catalytic domain
SCOP superfamily Baculovirus p35 protein
SCOP superfamily Soluble secreted chemokine inhibitor, VCCI
SCOP superfamily Osmotin, thaumatin-like protein
SCOP superfamily Virus attachment protein globular domain
SCOP superfamily Group II dsDNA viruses VP
SCOP superfamily Periplasmic chaperone C-domain
SCOP superfamily Cytochrome f, large domain
SCOP superfamily Diphtheria toxin, C-terminal domain
SCOP superfamily Invasin/intimin cell-adhesion fragments
SCOP superfamily CBD9-like
SCOP superfamily Actinoxanthin-like
SCOP superfamily Multiheme cytochromes
SCOP superfamily Fungal elicitin
SCOP superfamily Peridinin-chlorophyll protein
SCOP superfamily Chorismate mutase II
SCOP superfamily Serum albumin-like
SCOP superfamily gene 59 helicase assembly protein
SCOP superfamily Bacterial muramidases
SCOP superfamily A virus capsid protein alpha-helical domain
SCOP superfamily Aldehyde ferredoxin oxidoreductase, C-terminal domains
SCOP superfamily Cryptochrome/photolyase FAD-binding domain
SCOP superfamily Methyl-coenzyme M reductase alpha and beta chain C-terminal domain
SCOP superfamily Scaffolding protein gpD of bacteriophage procapsid
SCOP superfamily Guanido kinase N-terminal domain
SCOP superfamily FliG
SCOP superfamily NusB-like
SCOP superfamily Apolipophorin-III
SCOP superfamily Hepatitis B viral capsid (hbcag)
SCOP superfamily Retroviral matrix proteins
SCOP superfamily lambda integrase-like, N-terminal domain
SCOP superfamily Rad51 N-terminal domain-like
SCOP superfamily C-terminal domain of RNA polymerase alpha subunit
SCOP superfamily IHF-like DNA-binding proteins
SCOP superfamily Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
SCOP superfamily Cloroperoxidase
SCOP superfamily Insect pheromone/odorant-binding proteins
SCOP superfamily ROP protein
SCOP superfamily Colicin E immunity proteins
SCOP superfamily 4-helical cytokines
SCOP superfamily Histidine-containing phosphotransfer domain, HPT domain
SCOP superfamily TMV-like viral coat proteins
SCOP superfamily Cytochromes
SCOP superfamily Apolipoprotein
SCOP superfamily Diol dehydratase, gamma subunit
SCOP superfamily RAP domain-like
SCOP superfamily Bacterial immunoglobulin/albumin-binding domains
SCOP superfamily N-terminal Zn binding domain of HIV integrase
SCOP superfamily C-terminal effector domain of the bipartite response regulators
SCOP superfamily Epsilon subunit of F1F0-ATP synthase C-terminal domain
SCOP superfamily PspA lactotransferrin-binding region
SCOP superfamily Gam-like
SCOP superfamily RILP dimerisation region
SCOP superfamily YfgJ-like
SCOP superfamily MetI-like
SCOP superfamily flu NP-like
SCOP superfamily MalF N-terminal region-like
SCOP superfamily Api92-like
SCOP superfamily PSTPO5379-like
SCOP superfamily Jann2411-like
SCOP superfamily Rv2827c C-terminal domain-like
SCOP superfamily Lp2179-like
SCOP superfamily gpW/gp25-like
SCOP superfamily MbtH-like
SCOP superfamily NMB0513-like
SCOP superfamily BLRF2-like
SCOP superfamily PG1857-like
SCOP superfamily YdfO-like
SCOP superfamily Bacterial polysaccharide co-polymerase-like
SCOP superfamily NMB0488-like
SCOP superfamily MM3350-like
SCOP superfamily CdCA1 repeat-like
SCOP superfamily Dhaf3308-like
SCOP superfamily CobE/GbiG C-terminal domain-like
SCOP superfamily EreA/ChaN-like
SCOP superfamily NEAT domain-like
SCOP superfamily Lipase chaperone-like
SCOP superfamily PMT central region-like
SCOP superfamily AGR C 984p-like
SCOP superfamily MgtE N-terminal domain-like
SCOP superfamily HP0242-like
SCOP superfamily MG296-like
SCOP superfamily PSPTO4464-like
SCOP superfamily UraD-Like
SCOP superfamily MtlR-like
SCOP superfamily ENT-like
SCOP superfamily YheA/YmcA-like
SCOP superfamily AF1862-like
SCOP superfamily BH3980-like
SCOP superfamily PG0775 C-terminal domain-like
SCOP superfamily Ta0600-like
SCOP superfamily Bacillus cereus metalloprotein-like
SCOP superfamily HP0062-like
SCOP superfamily TM1646-like
SCOP superfamily YvfG-like
SCOP superfamily YnzC-like
SCOP superfamily occludin/ELL-like
SCOP superfamily MPN010-like
SCOP superfamily TSP9-like
SCOP superfamily Viral leader polypeptide zinc finger
SCOP superfamily Thermophilic metalloprotease-like
SCOP superfamily Peptidoglycan deacetylase N-terminal noncatalytic region
SCOP superfamily L,D-transpeptidase pre-catalytic domain-like
SCOP superfamily IlvD/EDD N-terminal domain-like
SCOP superfamily CorA soluble domain-like
SCOP superfamily XisI-like
SCOP superfamily SARS receptor-binding domain-like
SCOP superfamily TRCF domain-like
SCOP superfamily TM1622-like
SCOP superfamily ImmE5-like
SCOP superfamily VC0467-like
SCOP superfamily Transposase IS200-like
SCOP superfamily CcmK-like
SCOP superfamily DOPA-like
SCOP superfamily L35p-like
SCOP superfamily Kinetochore globular domain
SCOP superfamily Ns1 effector domain-like
SCOP superfamily Nqo1 middle domain-like
SCOP superfamily YktB/PF0168-like
SCOP superfamily CAC2185-like
SCOP superfamily AF0625-like
SCOP superfamily Bacteriophage trimeric proteins domain
SCOP superfamily Extracellular hemoglobin linker subunit, receptor domain
SCOP superfamily TM0957-like
SCOP superfamily GatD N-terminal domain-like
SCOP superfamily CarD-like
SCOP superfamily Duffy binding domain-like
SCOP superfamily IpaD-like
SCOP superfamily Hyaluronidase post-catalytic domain-like
SCOP superfamily YozE-like
SCOP superfamily Type III secretion system domain
SCOP superfamily HIV integrase-binding domain
SCOP superfamily MukF C-terminal domain-like
SCOP superfamily BAS1536-like
SCOP superfamily LemA-like
SCOP superfamily EsxAB dimer-like
SCOP superfamily MW0975(SA0943)-like
SCOP superfamily YppE-like
SCOP superfamily WRKY DNA-binding domain
SCOP superfamily Connexin43
SCOP superfamily RalF, C-terminal domain
SCOP superfamily AF0104/ALDC/Ptd012-like
SCOP superfamily Flagellar hook protein flgE
SCOP superfamily LEA14-like
SCOP superfamily ATP-dependent DNA ligase DNA-binding domain
SCOP superfamily Hypothetical protein MPN330
SCOP superfamily RNA-binding protein She2p
SCOP superfamily EspA/CesA-like
SCOP superfamily Avirulence protein AvrPto
SCOP superfamily XseB-like
SCOP superfamily DNA methylase specificity domain
SCOP superfamily Coronavirus S2 glycoprotein
SCOP superfamily Geminin coiled-coil domain
SCOP superfamily OmpH-like
SCOP superfamily QueA-like
SCOP superfamily Recombination protein RecR
SCOP superfamily Bacillus phage protein
SCOP superfamily 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
SCOP superfamily TTHA0583/YokD-like
SCOP superfamily Hypothetical protein MG354
SCOP superfamily Triger factor/SurA peptide-binding domain-like
SCOP superfamily DinB/YfiT-like putative metalloenzymes
SCOP superfamily Cag-Z
SCOP superfamily Hypothetical protein D-63
SCOP superfamily Bacteriocin immunity protein-like
SCOP superfamily Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain
SCOP superfamily Nickel-containing superoxide dismutase, NiSOD
SCOP superfamily PhoU-like
SCOP superfamily Alpha-hemoglobin stabilizing protein AHSP
SCOP superfamily KRAB domain (Kruppel-associated box)
SCOP superfamily Hypothetical protein Ta0289 C-terminal domain
SCOP superfamily SBT domain
SCOP superfamily Respiratory nitrate reductase 1 gamma chain
SCOP superfamily NinB
SCOP superfamily Suppressor of Fused, N-terminal domain
SCOP superfamily Sensory domain-like
SCOP superfamily Tombusvirus P19 core protein, VP19
SCOP superfamily General secretion pathway protein M, EpsM
SCOP superfamily Hypothetical protein TT1725
SCOP superfamily MCP/YpsA-like
SCOP superfamily DNA polymerase III chi subunit
SCOP superfamily F420-dependent methylenetetrahydromethanopterin dehydrogenase (MTD)
SCOP superfamily Trimeric adhesin
SCOP superfamily DNA-binding pseudobarrel domain
SCOP superfamily GyrA/ParC C-terminal domain-like
SCOP superfamily Hypothetical protein YgiW
SCOP superfamily Dextranase, N-terminal domain
SCOP superfamily P40 nucleoprotein
SCOP superfamily all-alpha NTP pyrophosphatases
SCOP superfamily YcfC-like
SCOP superfamily Invasion protein A (SipA) , C-terminal actin binding domain
SCOP superfamily Plant invertase/pectin methylesterase inhibitor
SCOP superfamily Flagellar export chaperone FliS
SCOP superfamily Staphylocoagulase
SCOP superfamily Typo IV secretion system protein TraC
SCOP superfamily Chemosensory protein Csp2
SCOP superfamily Plant proteinase inhibitors

Jump to [ Top of page · Assignment statistics ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.