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  Home > Genomes > Superfamily assignments for Bigelowiella natans CCMP2755 22


Bigelowiella natans CCMP2755 22 superfamily assignments

Taxonomy
Taxonomy browser entry

Eukaryota; Rhizaria; Cercozoa; Chlorarachniophyceae; Bigelowiella; Bigelowiella natans; Bigelowiella natans CCMP2755

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Fasta format sequences
Domain assignments

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Assignment statistics

Sequences: 21706 total
11374 (52 %) with assignment
442 average length
32 % amino acid coverage
Domains: 15466 total
960 unique superfamilies
635 unique families
269 average length
16.1 average superfamily size
94 % formed by duplication
Domain combinations: 1031 domain pairs
3466 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies
1191 1008 204 14 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
498 491 76 3 SCOP 56112 Protein kinase-like (PK-like)
399 364 117 1 SCOP 47473 EF-hand
393 378 61 1 SCOP 48403 Ankyrin repeat
283 280 29 12 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
278 235 57 11 SCOP 48371 ARM repeat
265 212 63 2 SCOP 48452 TPR-like
261 240 50 1 SCOP 50978 WD40 repeat-like
247 243 25 10 SCOP 53474 alpha/beta-Hydrolases
234 233 46 9 SCOP 51735 NAD(P)-binding Rossmann-fold domains
226 191 63 2 SCOP 57850 RING/U-box
212 153 54 1 SCOP 54928 RNA-binding domain, RBD
198 179 100 1 SCOP 50729 PH domain-like
192 112 26 0 SCOP 57667 beta-beta-alpha zinc fingers
187 176 28 4 SCOP 52833 Thioredoxin-like
178 173 20 4 SCOP 51197 Clavaminate synthase-like
173 154 13 0 SCOP 103473 MFS general substrate transporter
145 140 49 6 SCOP 54001 Cysteine proteinases
137 121 34 4 SCOP 51905 FAD/NAD(P)-binding domain
133 110 40 3 SCOP 54236 Ubiquitin-like
130 99 50 2 SCOP 49899 Concanavalin A-like lectins/glucanases
123 101 51 5 SCOP 50249 Nucleic acid-binding proteins
110 67 22 1 SCOP 81901 HCP-like
105 72 29 0 SCOP 81324 Voltage-gated potassium channels
104 103 24 5 SCOP 56784 HAD-like
100 80 44 0 SCOP 49562 C2 domain (Calcium/lipid-binding domain, CaLB)
97 55 15 6 SCOP 53067 Actin-like ATPase domain
95 82 19 1 SCOP 52058 L domain-like
87 84 12 3 SCOP 53448 Nucleotide-diphospho-sugar transferases
87 80 35 0 SCOP 46785 "Winged helix" DNA-binding domain
86 81 22 0 SCOP 52047 RNI-like
85 82 19 2 SCOP 52799 (Phosphotyrosine protein) phosphatases II
82 82 15 4 SCOP 56300 Metallo-dependent phosphatases
82 79 7 1 SCOP 103506 Mitochondrial carrier
82 81 25 0 SCOP 46565 Chaperone J-domain
77 77 21 7 SCOP 51445 (Trans)glycosidases
77 75 22 0 SCOP 82199 SET domain
77 66 35 0 SCOP 51045 WW domain
76 36 26 3 SCOP 81296 E set domains
76 71 33 0 SCOP 50156 PDZ domain-like
75 74 17 4 SCOP 53098 Ribonuclease H-like
74 53 22 0 SCOP 50985 RCC1/BLIP-II
72 41 36 0 SCOP 51206 cAMP-binding domain-like
69 65 40 0 SCOP 57903 FYVE/PHD zinc finger
69 44 20 1 SCOP 47923 Ypt/Rab-GAP domain of gyp1p
67 67 12 2 SCOP 56672 DNA/RNA polymerases
67 60 42 0 SCOP 46934 UBA-like
66 60 12 5 SCOP 53383 PLP-dependent transferases
64 58 11 2 SCOP 56219 DNase I-like
63 55 22 0 SCOP 46689 Homeodomain-like
63 54 11 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
62 59 13 2 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
61 61 32 0 SCOP 47769 SAM/Pointed domain
60 52 16 1 SCOP 117281 Kelch motif
59 57 12 0 SCOP 101898 NHL repeat
55 53 12 1 SCOP 53254 Phosphoglycerate mutase-like
55 53 16 0 SCOP 49764 HSP20-like chaperones
55 50 22 0 SCOP 49879 SMAD/FHA domain
50 46 23 1 SCOP 49785 Galactose-binding domain-like
50 37 26 0 SCOP 90209 Ran binding protein zinc finger-like
50 44 30 0 SCOP 54160 Chromo domain-like
49 47 9 0 SCOP 47616 GST C-terminal domain-like
48 45 11 1 SCOP 54534 FKBP-like
47 44 21 5 SCOP 56059 Glutathione synthetase ATP-binding domain-like
47 47 12 1 SCOP 50891 Cyclophilin-like
47 26 17 1 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
46 43 23 2 SCOP 52374 Nucleotidylyl transferase
46 46 10 2 SCOP 54495 UBC-like
46 39 11 0 SCOP 47095 HMG-box
46 45 8 1 SCOP 51430 NAD(P)-linked oxidoreductase
45 44 16 2 SCOP 53300 vWA-like
45 19 12 1 SCOP 63411 LuxS/MPP-like metallohydrolase
45 31 8 1 SCOP 47954 Cyclin-like
44 41 20 0 SCOP 48065 DBL homology domain (DH-domain)
44 44 22 0 SCOP 48097 Regulator of G-protein signaling, RGS
43 33 12 0 SCOP 51126 Pectin lyase-like
42 40 28 7 SCOP 54211 Ribosomal protein S5 domain 2-like
42 40 27 2 SCOP 50447 Translation proteins
42 16 12 0 SCOP 57184 Growth factor receptor domain
41 41 11 3 SCOP 55120 Pseudouridine synthase
41 34 10 1 SCOP 54427 NTF2-like
40 36 19 0 SCOP 64268 PX domain
39 39 8 1 SCOP 81606 PP2C-like
39 38 22 2 SCOP 55681 Class II aaRS and biotin synthetases
38 37 9 1 SCOP 47113 Histone-fold
38 33 13 1 SCOP 56801 Acetyl-CoA synthetase-like
38 34 18 0 SCOP 50044 SH3-domain
38 27 16 0 SCOP 90123 ABC transporter transmembrane region
37 37 13 1 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
36 32 22 0 SCOP 63748 Tudor/PWWP/MBT
35 34 13 2 SCOP 52402 Adenine nucleotide alpha hydrolases-like
35 33 9 1 SCOP 52821 Rhodanese/Cell cycle control phosphatase
35 35 10 0 SCOP 63829 Calcium-dependent phosphotriesterase
35 28 8 0 SCOP 54909 Dimeric alpha+beta barrel
35 35 4 0 SCOP 47895 Transducin (alpha subunit), insertion domain
34 34 7 0 SCOP 55811 Nudix
34 25 20 0 SCOP 52113 BRCT domain
33 33 19 0 SCOP 48350 GTPase activation domain, GAP
33 32 14 0 SCOP 52087 CRAL/TRIO domain
33 33 7 1 SCOP 56204 Hect, E3 ligase catalytic domain
32 31 10 2 SCOP 53187 Zn-dependent exopeptidases
32 31 8 0 SCOP 58038 SNARE fusion complex
32 15 7 1 SCOP 55753 Actin depolymerizing proteins
31 30 12 2 SCOP 52317 Class I glutamine amidotransferase-like
31 30 14 0 SCOP 50965 Galactose oxidase, central domain
31 30 19 0 SCOP 68906 SAP domain
30 29 12 1 SCOP 55961 Bet v1-like
30 30 19 0 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
30 30 10 0 SCOP 81383 F-box domain
29 20 11 5 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
29 28 6 1 SCOP 50630 Acid proteases
29 28 17 3 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
29 29 12 1 SCOP 81665 Calcium ATPase, transmembrane domain M
28 25 9 3 SCOP 51182 RmlC-like cupins
27 26 9 6 SCOP 51569 Aldolase
27 20 9 1 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
27 23 9 3 SCOP 52096 ClpP/crotonase
27 27 7 4 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
27 26 7 2 SCOP 56104 SAICAR synthase-like
27 25 14 1 SCOP 47576 Calponin-homology domain, CH-domain
27 21 18 1 SCOP 54631 CBS-domain pair
27 23 14 0 SCOP 63825 YWTD domain
27 20 12 0 SCOP 90229 CCCH zinc finger
27 21 20 0 SCOP 117839 WWE domain
27 27 12 0 SCOP 81653 Calcium ATPase, transduction domain A
26 24 12 0 SCOP 103657 BAR/IMD domain-like
26 26 13 3 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
26 24 8 1 SCOP 50129 GroES-like
26 26 14 0 SCOP 54695 POZ domain
26 25 9 1 SCOP 101447 Formin homology 2 domain (FH2 domain)
26 26 8 0 SCOP 57701 Zn2/Cys6 DNA-binding domain
25 18 8 1 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
25 25 8 0 SCOP 55856 Cytochrome b5-like heme/steroid binding domain
25 25 15 1 SCOP 56399 ADP-ribosylation
25 25 10 1 SCOP 54373 FAD-linked reductases, C-terminal domain
24 24 8 1 SCOP 75217 alpha/beta knot
24 24 3 1 SCOP 103511 Chlorophyll a-b binding protein
24 22 9 3 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
24 15 11 0 SCOP 82185 Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
24 21 11 0 SCOP 47370 Bromodomain
23 12 7 1 SCOP 54980 EF-G C-terminal domain-like
22 22 7 3 SCOP 56281 Metallo-hydrolase/oxidoreductase
22 22 5 2 SCOP 64356 SNARE-like
21 21 6 1 SCOP 102114 Radical SAM enzymes
21 21 6 1 SCOP 50182 Sm-like ribonucleoproteins
21 21 14 0 SCOP 81301 Nucleotidyltransferase
21 21 7 5 SCOP 52467 DHS-like NAD/FAD-binding domain
21 7 7 1 SCOP 56436 C-type lectin-like
21 14 8 0 SCOP 54171 DNA-binding domain
20 20 7 7 SCOP 51556 Metallo-dependent hydrolases
20 18 11 1 SCOP 53850 Periplasmic binding protein-like II
20 20 6 1 SCOP 48264 Cytochrome P450
20 16 10 1 SCOP 75005 Arabinanase/levansucrase/invertase
20 12 5 0 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
20 19 11 4 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
19 18 7 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
19 19 6 3 SCOP 109604 HD-domain/PDEase-like
19 19 4 1 SCOP 53649 Alkaline phosphatase-like
19 16 7 2 SCOP 52768 Arginase/deacetylase
19 19 11 2 SCOP 88697 PUA domain-like
19 19 7 1 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
18 18 5 4 SCOP 48208 Six-hairpin glycosidases
18 10 5 1 SCOP 53901 Thiolase-like
18 18 7 0 SCOP 57863 ArfGap/RecO-like zinc finger
18 12 10 0 SCOP 57196 EGF/Laminin
17 16 8 1 SCOP 50104 Translation proteins SH3-like domain
17 17 5 0 SCOP 144091 Rhomboid-like
17 16 11 1 SCOP 50494 Trypsin-like serine proteases
17 17 12 1 SCOP 51230 Single hybrid motif
17 9 6 0 SCOP 55785 PYP-like sensor domain (PAS domain)
17 15 11 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
17 16 13 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
17 17 9 0 SCOP 144232 HIT/MYND zinc finger-like
16 15 7 4 SCOP 53613 Ribokinase-like
16 15 11 0 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
16 16 5 1 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
16 16 3 1 SCOP 47240 Ferritin-like
16 15 7 2 SCOP 53720 ALDH-like
16 16 7 5 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
16 16 5 1 SCOP 51395 FMN-linked oxidoreductases
16 16 8 2 SCOP 52743 Subtilisin-like
16 14 8 0 SCOP 49265 Fibronectin type III
16 15 9 1 SCOP 63380 Riboflavin synthase domain-like
16 16 6 0 SCOP 46938 CRAL/TRIO N-terminal domain
16 8 5 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
15 10 8 0 SCOP 51161 Trimeric LpxA-like enzymes
15 15 7 1 SCOP 54292 2Fe-2S ferredoxin-like
15 13 8 1 SCOP 55781 GAF domain-like
15 15 9 1 SCOP 52954 Class II aaRS ABD-related
15 13 5 2 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
15 14 9 0 SCOP 56176 FAD-binding/transporter-associated domain-like
15 15 6 0 SCOP 52075 Outer arm dynein light chain 1
15 15 4 2 SCOP 52029 GroEL apical domain-like
15 14 9 0 SCOP 143503 PUG domain-like
14 14 3 1 SCOP 56655 Carbohydrate phosphatase
14 14 6 1 SCOP 50475 FMN-binding split barrel
14 14 5 1 SCOP 52151 FabD/lysophospholipase-like
14 10 8 0 SCOP 55073 Nucleotide cyclase
14 14 4 1 SCOP 52490 Tubulin nucleotide-binding domain-like
14 14 3 1 SCOP 48592 GroEL equatorial domain-like
14 14 4 1 SCOP 55307 Tubulin C-terminal domain-like
14 14 7 0 SCOP 54277 CAD & PB1 domains
14 11 8 0 SCOP 56487 SRCR-like
14 14 5 0 SCOP 81822 RuBisCo LSMT C-terminal, substrate-binding domain
14 7 6 0 SCOP 82895 TSP-1 type 1 repeat
13 13 6 2 SCOP 53271 PRTase-like
13 11 5 1 SCOP 81338 Aquaporin-like
13 13 4 2 SCOP 53927 Cytidine deaminase-like
13 12 6 2 SCOP 52218 Flavoproteins
13 12 7 5 SCOP 100950 NagB/RpiA/CoA transferase-like
13 13 6 2 SCOP 48150 DNA-glycosylase
13 13 8 1 SCOP 88723 PIN domain-like
13 12 10 2 SCOP 74650 Galactose mutarotase-like
13 9 9 0 SCOP 55021 ACT-like
13 13 8 1 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
13 8 8 0 SCOP 50370 Ricin B-like lectins
13 13 5 0 SCOP 47661 t-snare proteins
13 11 10 1 SCOP 52440 PreATP-grasp domain
13 13 6 0 SCOP 90002 Hypothetical protein YjiA, C-terminal domain
13 13 6 1 SCOP 74788 Cullin repeat-like
13 13 5 1 SCOP 109993 VPS9 domain
13 13 3 0 SCOP 54849 GroEL-intermediate domain like
12 12 10 1 SCOP 55920 Creatinase/aminopeptidase
12 11 6 0 SCOP 52949 Macro domain-like
12 9 7 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
12 12 3 0 SCOP 52266 SGNH hydrolase
12 12 4 1 SCOP 56601 beta-lactamase/transpeptidase-like
12 7 5 1 SCOP 52777 CoA-dependent acyltransferases
12 12 4 1 SCOP 47203 Acyl-CoA dehydrogenase C-terminal domain-like
12 12 10 1 SCOP 81631 PAP/OAS1 substrate-binding domain
12 12 6 1 SCOP 48464 ENTH/VHS domain
12 12 9 0 SCOP 49599 TRAF domain-like
11 11 7 1 SCOP 52980 Restriction endonuclease-like
11 11 2 1 SCOP 55068 Peptide methionine sulfoxide reductase
11 10 3 2 SCOP 48576 Terpenoid synthases
11 11 4 2 SCOP 55315 L30e-like
11 11 7 1 SCOP 50022 ISP domain
11 11 5 0 SCOP 54975 Acylphosphatase/BLUF domain-like
11 11 3 1 SCOP 56645 Acyl-CoA dehydrogenase NM domain-like
11 4 3 1 SCOP 53738 Phosphoglucomutase, first 3 domains
10 10 6 5 SCOP 51366 Ribulose-phoshate binding barrel
10 10 2 1 SCOP 51316 Mss4-like
10 9 2 2 SCOP 48113 Heme-dependent peroxidases
10 10 6 1 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
10 9 7 0 SCOP 52172 CheY-like
10 10 3 0 SCOP 161084 MAPEG domain-like
10 10 3 1 SCOP 55724 Mog1p/PsbP-like
10 10 2 1 SCOP 111352 Ammonium transporter
10 9 7 0 SCOP 161111 Cation efflux protein transmembrane domain-like
10 10 5 1 SCOP 48173 Cryptochrome/photolyase FAD-binding domain
10 10 5 1 SCOP 52425 Cryptochrome/photolyase, N-terminal domain
10 10 6 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
10 10 5 2 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
10 7 6 0 SCOP 49354 PapD-like
10 10 2 0 SCOP 117892 Band 7/SPFH domain
10 9 3 0 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
10 8 5 0 SCOP 55666 Ribonuclease PH domain 2-like
10 7 4 0 SCOP 55277 GYF domain
9 6 5 0 SCOP 47336 ACP-like
9 9 6 0 SCOP 55174 Alpha-L RNA-binding motif
9 8 5 1 SCOP 50324 Inorganic pyrophosphatase
9 9 3 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
9 9 3 0 SCOP 46579 Prefoldin
9 9 4 2 SCOP 55931 Glutamine synthetase/guanido kinase
9 6 4 1 SCOP 54447 ssDNA-binding transcriptional regulator domain
9 8 5 0 SCOP 110857 Gamma-glutamyl cyclotransferase-like
9 9 7 1 SCOP 81340 Clc chloride channel
9 9 5 1 SCOP 50800 PK beta-barrel domain-like
9 9 5 2 SCOP 52922 TK C-terminal domain-like
9 9 4 0 SCOP 51011 Glycosyl hydrolase domain
9 9 3 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
9 9 5 0 SCOP 90112 Neurotransmitter-gated ion-channel transmembrane pore
9 8 7 0 SCOP 118310 AN1-like Zinc finger
9 9 7 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
9 9 6 0 SCOP 101576 Supernatant protein factor (SPF), C-terminal domain
9 8 3 1 SCOP 48445 14-3-3 protein
9 9 3 0 SCOP 46774 ARID-like
9 9 5 0 SCOP 47676 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
9 9 8 0 SCOP 52025 PA domain
9 9 6 0 SCOP 57756 Retrovirus zinc finger-like domains
8 8 3 0 SCOP 57829 Zn-binding ribosomal proteins
8 7 4 1 SCOP 54197 HIT-like
8 8 1 1 SCOP 54648 DLC
8 7 5 2 SCOP 48239 Terpenoid cyclases/Protein prenyltransferases
8 8 4 1 SCOP 51069 Carbonic anhydrase
8 7 5 0 SCOP 57783 Zinc beta-ribbon
8 8 5 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
8 8 3 0 SCOP 50814 Lipocalins
8 8 6 1 SCOP 51604 Enolase C-terminal domain-like
8 5 5 1 SCOP 56024 Phospholipase D/nuclease
8 8 5 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
8 8 4 0 SCOP 52935 PK C-terminal domain-like
8 8 4 1 SCOP 140990 FtsH protease domain-like
8 8 4 1 SCOP 48225 Seven-hairpin glycosidases
8 7 4 1 SCOP 55060 GHMP Kinase, C-terminal domain
8 8 4 1 SCOP 81271 TGS-like
8 8 3 1 SCOP 101152 Mob1/phocein
8 8 7 0 SCOP 63570 PABC (PABP) domain
8 8 1 0 SCOP 57959 Leucine zipper domain
8 7 4 0 SCOP 140383 BSD domain-like
7 7 5 0 SCOP 51695 PLC-like phosphodiesterases
7 7 3 1 SCOP 53748 Phosphoglycerate kinase
7 6 5 1 SCOP 55205 EPT/RTPC-like
7 7 5 2 SCOP 51419 PLP-binding barrel
7 7 6 0 SCOP 81321 Family A G protein-coupled receptor-like
7 7 5 1 SCOP 52499 Isochorismatase-like hydrolases
7 7 4 1 SCOP 56317 Carbon-nitrogen hydrolase
7 7 2 0 SCOP 51306 LexA/Signal peptidase
7 7 4 0 SCOP 46458 Globin-like
7 6 4 3 SCOP 51998 PFL-like glycyl radical enzymes
7 6 6 1 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
7 7 6 0 SCOP 69322 Tricorn protease domain 2
7 7 6 0 SCOP 82171 DPP6 N-terminal domain-like
7 7 2 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
7 3 3 0 SCOP 50199 Staphylococcal nuclease
7 7 7 1 SCOP 51246 Rudiment single hybrid motif
7 6 5 0 SCOP 69318 Integrin alpha N-terminal domain
7 7 7 0 SCOP 81995 beta-sandwich domain of Sec23/24
7 7 4 0 SCOP 52129 Caspase-like
7 7 3 0 SCOP 49363 Purple acid phosphatase, N-terminal domain
7 7 2 0 SCOP 52279 Beta-D-glucan exohydrolase, C-terminal domain
7 7 4 0 SCOP 48366 Ras GEF
7 5 5 1 SCOP 158702 Sec63 N-terminal domain-like
7 6 5 1 SCOP 81837 BEACH domain
7 7 7 0 SCOP 74924 Cap-Gly domain
7 7 5 1 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
7 6 4 0 SCOP 109905 Surp module (SWAP domain)
7 7 2 1 SCOP 49447 Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
7 7 4 1 SCOP 75632 Cullin homology domain
7 7 5 0 SCOP 50911 Mannose 6-phosphate receptor domain
7 7 7 0 SCOP 143791 DUSP-like
6 6 3 2 SCOP 52141 Uracil-DNA glycosylase-like
6 6 3 2 SCOP 53137 Translational machinery components
6 6 5 2 SCOP 53633 Carbamate kinase-like
6 6 5 1 SCOP 51730 FAD-linked oxidoreductase
6 5 3 1 SCOP 50715 Ribosomal protein L25-like
6 6 2 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
6 6 5 2 SCOP 56796 Dehydroquinate synthase-like
6 3 3 0 SCOP 56988 Anthrax protective antigen
6 5 4 1 SCOP 51726 UROD/MetE-like
6 6 1 1 SCOP 56815 Sec1/munc18-like (SM) proteins
6 6 1 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
6 6 3 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
6 6 4 0 SCOP 57997 Tropomyosin
6 2 2 0 SCOP 49329 Cu,Zn superoxide dismutase-like
6 6 4 0 SCOP 49777 PEBP-like
6 6 5 1 SCOP 88713 Glycoside hydrolase/deacetylase
6 6 4 1 SCOP 56529 FAH
6 5 5 1 SCOP 143113 NAP-like
6 6 4 0 SCOP 55008 HMA, heavy metal-associated domain
6 6 4 0 SCOP 103111 Activator of Hsp90 ATPase, Aha1
6 6 2 0 SCOP 101478 ADP-ribosylglycohydrolase
6 6 2 0 SCOP 52091 SpoIIaa-like
6 6 3 0 SCOP 53822 Periplasmic binding protein-like I
6 6 5 0 SCOP 55136 Probable bacterial effector-binding domain
6 6 6 1 SCOP 55186 ThrRS/AlaRS common domain
6 5 3 1 SCOP 55979 DNA clamp
6 4 3 0 SCOP 50405 Actin-crosslinking proteins
6 4 4 1 SCOP 56014 Nitrite and sulphite reductase 4Fe-4S domain-like
6 6 2 1 SCOP 48019 post-AAA+ oligomerization domain-like
6 6 4 1 SCOP 54826 Enolase N-terminal domain-like
6 6 4 1 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
6 5 4 1 SCOP 55945 TATA-box binding protein-like
6 6 2 0 SCOP 55031 Bacterial exopeptidase dimerisation domain
6 6 4 1 SCOP 47446 Signal peptide-binding domain
6 6 4 0 SCOP 82708 R3H domain
6 6 3 1 SCOP 69000 FAD-dependent thiol oxidase
6 5 3 0 SCOP 55394 Bactericidal permeability-increasing protein, BPI
6 6 5 0 SCOP 47391 Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
6 6 4 0 SCOP 57552 Blood coagulation inhibitor (disintegrin)
6 6 3 1 SCOP 81382 Skp1 dimerisation domain-like
5 5 3 1 SCOP 53167 Purine and uridine phosphorylases
5 5 3 1 SCOP 56808 Ribosomal protein L1
5 5 3 1 SCOP 53697 SIS domain
5 5 4 0 SCOP 111331 NAD kinase/diacylglycerol kinase-like
5 5 4 0 SCOP 46946 S13-like H2TH domain
5 5 2 1 SCOP 53784 Phosphofructokinase
5 5 3 3 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
5 3 2 0 SCOP 81333 F1F0 ATP synthase subunit C
5 5 3 1 SCOP 51351 Triosephosphate isomerase (TIM)
5 5 3 2 SCOP 55821 YrdC/RibB
5 5 5 1 SCOP 54862 4Fe-4S ferredoxins
5 5 3 0 SCOP 55469 FMN-dependent nitroreductase-like
5 5 3 1 SCOP 53590 Nucleoside hydrolase
5 5 3 0 SCOP 89895 FYSH domain
5 5 2 0 SCOP 54897 Protease propeptides/inhibitors
5 5 4 1 SCOP 52016 LeuD/IlvD-like
5 3 3 0 SCOP 49503 Cupredoxins
5 5 3 0 SCOP 143456 VC0467-like
5 5 3 0 SCOP 51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
5 4 3 1 SCOP 51338 Composite domain of metallo-dependent hydrolases
5 5 5 1 SCOP 103025 Folate-binding domain
5 5 5 0 SCOP 142921 WGR domain-like
5 5 5 1 SCOP 56719 Type II DNA topoisomerase
5 5 3 0 SCOP 51294 Hedgehog/intein (Hint) domain
5 4 4 0 SCOP 51101 Mannose-binding lectins
5 5 5 0 SCOP 117289 Nucleoporin domain
5 5 2 0 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
5 5 4 0 SCOP 100966 Translation initiation factor 2 beta, aIF2beta, N-terminal domain
5 5 3 1 SCOP 54768 dsRNA-binding domain-like
5 5 1 0 SCOP 47459 HLH, helix-loop-helix DNA-binding domain
5 5 5 1 SCOP 49348 Clathrin adaptor appendage domain
5 3 3 0 SCOP 49854 Spermadhesin, CUB domain
5 5 3 0 SCOP 69012 alpha-ketoacid dehydrogenase kinase, N-terminal domain
5 5 4 1 SCOP 48425 Sec7 domain
5 5 5 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
4 4 2 1 SCOP 53790 Tetrapyrrole methylase
4 4 1 1 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
4 4 3 1 SCOP 52080 Ribosomal proteins L15p and L18e
4 4 4 0 SCOP 110324 Ribosomal L27 protein-like
4 4 2 1 SCOP 75620 Release factor
4 4 2 0 SCOP 47060 S15/NS1 RNA-binding domain
4 4 1 1 SCOP 48557 L-aspartase-like
4 3 3 1 SCOP 51283 dUTPase-like
4 4 1 0 SCOP 89360 HesB-like domain
4 4 2 1 SCOP 51713 tRNA-guanine transglycosylase
4 4 3 0 SCOP 55298 YjgF-like
4 4 2 0 SCOP 82657 BolA-like
4 4 2 0 SCOP 144122 Tim10-like
4 4 2 1 SCOP 48256 Citrate synthase
4 4 3 0 SCOP 48613 Heme oxygenase-like
4 4 3 0 SCOP 110296 Oligoxyloglucan reducing end-specific cellobiohydrolase
4 4 3 1 SCOP 102886 Coproporphyrinogen III oxidase
4 4 4 0 SCOP 47027 Acyl-CoA binding protein
4 3 3 2 SCOP 54506 Diaminopimelate epimerase-like
4 4 2 1 SCOP 56019 The spindle assembly checkpoint protein mad2
4 4 4 0 SCOP 47819 HRDC-like
4 4 2 2 SCOP 52972 ITPase-like
4 4 3 1 SCOP 82282 Homocysteine S-methyltransferase
4 4 2 0 SCOP 55257 RBP11-like subunits of RNA polymerase
4 4 4 0 SCOP 55159 eIF1-like
4 4 3 1 SCOP 55418 eIF4e-like
4 4 2 0 SCOP 55770 Profilin (actin-binding protein)
4 3 2 0 SCOP 111038 YjbQ-like
4 4 3 0 SCOP 69118 AhpD-like
4 4 3 1 SCOP 102405 MCP/YpsA-like
4 4 2 0 SCOP 141571 Pentapeptide repeat-like
4 3 3 1 SCOP 56524 Oxidoreductase molybdopterin-binding domain
4 4 4 0 SCOP 143990 YbiA-like
4 4 3 1 SCOP 53732 Aconitase iron-sulfur domain
4 3 3 0 SCOP 69065 RNase III domain-like
4 4 2 0 SCOP 57802 Rubredoxin-like
4 4 1 0 SCOP 103196 Roadblock/LC7 domain
4 4 4 0 SCOP 47781 RuvA domain 2-like
4 4 3 0 SCOP 49452 Starch-binding domain-like
4 4 2 0 SCOP 54626 Chalcone isomerase
4 4 4 0 SCOP 47592 SWIB/MDM2 domain
4 3 3 0 SCOP 56574 Serpins
4 4 3 1 SCOP 89124 Nop domain
4 4 2 0 SCOP 111321 AF1104-like
4 4 4 1 SCOP 53092 Creatinase/prolidase N-terminal domain
4 4 4 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
4 3 3 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
4 4 2 0 SCOP 81923 Double Clp-N motif
4 4 2 0 SCOP 49344 CBD9-like
4 2 2 1 SCOP 55973 S-adenosylmethionine synthetase
4 4 4 2 SCOP 51971 Nucleotide-binding domain
4 4 4 1 SCOP 52210 Succinyl-CoA synthetase domains
4 4 4 1 SCOP 50621 Alanine racemase C-terminal domain-like
4 3 3 1 SCOP 56042 PurM C-terminal domain-like
4 3 3 1 SCOP 55326 PurM N-terminal domain-like
4 2 2 1 SCOP 56053 Ribosomal protein L6
4 4 4 0 SCOP 47741 CO dehydrogenase ISP C-domain like
4 3 3 0 SCOP 55124 Nitrite/Sulfite reductase N-terminal domain-like
4 4 3 1 SCOP 55957 Phosphoglucomutase, C-terminal domain
4 4 3 0 SCOP 63712 Nicotinic receptor ligand binding domain-like
4 4 3 0 SCOP 158573 GINS helical bundle-like
4 4 3 0 SCOP 140741 RUN domain-like
4 2 2 0 SCOP 49303 beta-Galactosidase/glucuronidase domain
4 4 3 0 SCOP 48340 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
4 4 4 0 SCOP 57414 Hairpin loop containing domain-like
4 4 1 0 SCOP 54368 Glutamine synthetase, N-terminal domain
4 4 3 0 SCOP 47862 Saposin
4 4 3 0 SCOP 102848 NSFL1 (p97 ATPase) cofactor p47, SEP domain
4 1 1 0 SCOP 81698 FF domain
4 4 3 0 SCOP 109715 DEK C-terminal domain
4 4 3 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
4 4 2 0 SCOP 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
4 4 4 1 SCOP 81811 Helical domain of Sec23/24
4 4 4 0 SCOP 82919 Zn-finger domain of Sec23/24
3 3 2 1 SCOP 75304 Amidase signature (AS) enzymes
3 3 2 0 SCOP 82607 YbaB-like
3 3 2 1 SCOP 52166 Ribosomal protein L4
3 3 2 0 SCOP 54843 Ribosomal protein L22
3 3 3 1 SCOP 53597 Dihydrofolate reductase-like
3 3 2 0 SCOP 143800 L28p-like
3 2 2 1 SCOP 75625 YebC-like
3 3 2 0 SCOP 160369 Ribosomal protein L10-like
3 3 2 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
3 3 3 1 SCOP 52161 Ribosomal protein L13
3 3 3 2 SCOP 46626 Cytochrome c
3 3 1 1 SCOP 56322 ADC synthase
3 3 2 1 SCOP 57798 Casein kinase II beta subunit
3 3 2 1 SCOP 48439 Protein prenylyltransferase
3 3 2 1 SCOP 53639 AraD/HMP-PK domain-like
3 3 2 1 SCOP 140959 Indolic compounds 2,3-dioxygenase-like
3 2 2 1 SCOP 69645 Arp2/3 complex subunits
3 3 1 1 SCOP 111126 Ligand-binding domain in the NO signalling and Golgi transport
3 3 3 1 SCOP 64153 YjeF N-terminal domain-like
3 2 2 1 SCOP 55909 Pentein
3 2 2 0 SCOP 52788 Phosphotyrosine protein phosphatases I
3 3 2 1 SCOP 53800 Chelatase
3 3 3 0 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
3 3 3 0 SCOP 109770 Nickel-containing superoxide dismutase, NiSOD
3 3 2 0 SCOP 102712 JAB1/MPN domain
3 3 2 1 SCOP 118196 YaeB-like
3 3 2 0 SCOP 47413 lambda repressor-like DNA-binding domains
3 3 3 0 SCOP 82771 GIY-YIG endonuclease
3 3 2 0 SCOP 55797 PR-1-like
3 3 1 0 SCOP 101112 Oxygen-evolving enhancer protein 3,
3 3 3 1 SCOP 53218 Molybdenum cofactor biosynthesis proteins
3 3 3 0 SCOP 54736 ClpS-like
3 3 3 1 SCOP 50993 Peptidase/esterase 'gauge' domain
3 3 3 1 SCOP 48600 Chorismate mutase II
3 3 3 0 SCOP 55826 YbaK/ProRS associated domain
3 3 3 0 SCOP 101386 all-alpha NTP pyrophosphatases
3 3 2 1 SCOP 52335 Methylglyoxal synthase-like
3 3 2 0 SCOP 160631 SMI1/KNR4-like
3 3 2 1 SCOP 74784 Translin
3 3 3 2 SCOP 46548 alpha-helical ferredoxin
3 3 1 1 SCOP 102462 Peptidyl-tRNA hydrolase II
3 3 3 1 SCOP 56003 Molybdenum cofactor-binding domain
3 3 3 0 SCOP 46589 tRNA-binding arm
3 3 3 0 SCOP 52200 Toll/Interleukin receptor TIR domain
3 3 2 0 SCOP 55103 FAD-linked oxidases, C-terminal domain
3 3 2 0 SCOP 89372 Fucose-specific lectin
3 3 2 1 SCOP 46906 Ribosomal protein L11, C-terminal domain
3 3 3 0 SCOP 160443 SMR domain-like
3 3 3 0 SCOP 47384 Homodimeric domain of signal transducing histidine kinase
3 3 3 0 SCOP 49468 VHL
3 3 3 0 SCOP 55658 L9 N-domain-like
3 3 1 0 SCOP 158745 LanC-like
3 3 2 0 SCOP 160059 PriA/YqbF domain
3 3 3 0 SCOP 55816 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
3 3 3 0 SCOP 48334 DNA repair protein MutS, domain III
3 3 2 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
3 3 3 1 SCOP 53623 MurD-like peptide ligases, catalytic domain
3 3 3 1 SCOP 49870 Osmotin, thaumatin-like protein
3 3 3 0 SCOP 54665 CO dehydrogenase molybdoprotein N-domain-like
3 3 2 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
3 3 3 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
3 3 3 0 SCOP 55447 CO dehydrogenase flavoprotein C-terminal domain-like
3 3 2 1 SCOP 56327 LDH C-terminal domain-like
3 3 1 1 SCOP 55637 Cell cycle regulatory proteins
3 3 3 0 SCOP 82861 Mechanosensitive channel protein MscS (YggB), transmembrane region
3 2 2 0 SCOP 55550 SH2 domain
3 3 2 0 SCOP 55545 beta-N-acetylhexosaminidase-like domain
3 3 3 0 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
3 3 3 0 SCOP 55271 DNA repair protein MutS, domain I
3 3 3 0 SCOP 141072 CalX-like
3 3 2 0 SCOP 118359 Expressed protein At2g23090/F21P24.15
3 3 2 0 SCOP 55455 SRF-like
3 3 3 0 SCOP 116846 MIT domain
3 3 3 0 SCOP 75001 Dipeptidyl peptidase I (cathepsin C), exclusion domain
3 3 1 1 SCOP 55481 N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
3 3 3 1 SCOP 82754 C-terminal, gelsolin-like domain of Sec23/24
3 3 1 0 SCOP 144074 E2F-DP heterodimerization region
3 3 3 0 SCOP 88688 Families 57/38 glycoside transferase middle domain
3 3 3 0 SCOP 55261 GAD domain-like
3 2 2 1 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
3 3 2 0 SCOP 110942 HSP90 C-terminal domain
3 3 2 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
3 3 3 1 SCOP 117018 ATP-dependent DNA ligase DNA-binding domain
3 3 2 0 SCOP 75553 Smc hinge domain
3 3 2 0 SCOP 140111 Endosomal sorting complex assembly domain
3 3 3 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
3 3 1 0 SCOP 82215 C-terminal autoproteolytic domain of nucleoporin nup98
3 3 3 0 SCOP 46942 Elongation factor TFIIS domain 2
3 3 2 0 SCOP 69340 C-terminal domain of adenylylcyclase associated protein
3 3 3 0 SCOP 47031 Second domain of FERM
3 3 3 0 SCOP 49758 Calpain large subunit, middle domain (domain III)
3 3 3 0 SCOP 64586 C-terminal domain of ProRS
3 3 3 0 SCOP 47802 DNA polymerase beta, N-terminal domain-like
3 3 2 0 SCOP 109728 Hypothetical protein AF0491, middle domain
2 2 2 1 SCOP 56420 Peptide deformylase
2 2 1 0 SCOP 89919 Ribosome-binding factor A, RbfA
2 2 2 0 SCOP 54999 Ribosomal protein S10
2 2 1 0 SCOP 54570 Ribosomal protein S19
2 2 1 1 SCOP 56047 Ribosomal protein S8
2 2 2 1 SCOP 64263 Prokaryotic ribosomal protein L17
2 2 1 1 SCOP 64182 DHH phosphoesterases
2 1 1 0 SCOP 56214 4'-phosphopantetheinyl transferase
2 2 2 1 SCOP 55831 Thymidylate synthase/dCMP hydroxymethylase
2 2 1 0 SCOP 141091 L21p-like
2 2 2 1 SCOP 82649 SufE/NifU
2 2 1 0 SCOP 109998 Triger factor/SurA peptide-binding domain-like
2 2 1 1 SCOP 55194 Ribosome recycling factor, RRF
2 2 2 0 SCOP 54565 Ribosomal protein S16
2 2 2 0 SCOP 51261 Duplicated hybrid motif
2 2 2 1 SCOP 103263 Chorismate synthase, AroC
2 2 2 1 SCOP 64005 Undecaprenyl diphosphate synthase
2 2 2 0 SCOP 101908 Putative isomerase YbhE
2 2 2 0 SCOP 54060 His-Me finger endonucleases
2 2 2 0 SCOP 46561 Ribosomal protein L29 (L29p)
2 2 2 0 SCOP 54995 Ribosomal protein S6
2 2 2 0 SCOP 55387 Frataxin/Nqo15-like
2 2 2 0 SCOP 54575 Ribosomal protein L31e
2 2 2 1 SCOP 69500 DTD-like
2 2 2 1 SCOP 53328 Formyltransferase
2 2 2 0 SCOP 55144 LigT-like
2 2 2 0 SCOP 55248 PCD-like
2 2 1 1 SCOP 53774 Glutaminase/Asparaginase
2 2 2 2 SCOP 90096 Subunits of heterodimeric actin filament capping protein Capz
2 2 1 0 SCOP 48662 Ribosomal protein L39e
2 1 1 1 SCOP 118203 Vacuolar ATP synthase subunit C
2 2 2 0 SCOP 47072 Cysteine alpha-hairpin motif
2 2 1 0 SCOP 53032 tRNA-intron endonuclease catalytic domain-like
2 1 1 0 SCOP 103378 2-methylcitrate dehydratase PrpD
2 2 1 1 SCOP 64234 Photosystem I subunit PsaD
2 2 1 0 SCOP 50090 Electron transport accessory proteins
2 2 1 1 SCOP 55239 RuBisCO, small subunit
2 2 2 1 SCOP 101546 ASF1-like
2 1 1 0 SCOP 55040 Molybdenum cofactor biosynthesis protein C, MoaC
2 2 2 1 SCOP 51717 Dihydropteroate synthetase-like
2 2 2 0 SCOP 103642 Sec-C motif
2 1 1 0 SCOP 46955 Putative DNA-binding domain
2 2 1 0 SCOP 48484 Lipoxigenase
2 2 2 1 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
2 2 1 0 SCOP 53807 "Helical backbone" metal receptor
2 2 2 1 SCOP 56349 DNA breaking-rejoining enzymes
2 2 2 0 SCOP 89733 L-sulfolactate dehydrogenase-like
2 2 2 0 SCOP 158682 TerB-like
2 2 2 0 SCOP 55154 CYTH-like phosphatases
2 2 2 1 SCOP 54913 GlnB-like
2 2 2 0 SCOP 53955 Lysozyme-like
2 2 2 1 SCOP 117856 AF0104/ALDC/Ptd012-like
2 1 1 1 SCOP 54518 Tubby C-terminal domain-like
2 2 1 0 SCOP 55200 Translation initiation factor IF3, C-terminal domain
2 2 1 0 SCOP 158997 Trm112p-like
2 2 2 0 SCOP 51391 Thiamin phosphate synthase
2 2 2 0 SCOP 89028 Cobalamin adenosyltransferase-like
2 2 2 0 SCOP 110916 Peptidyl-tRNA hydrolase domain-like
2 2 2 1 SCOP 89796 CoA-transferase family III (CaiB/BaiF)
2 2 2 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
2 2 2 1 SCOP 52242 Cobalamin (vitamin B12)-binding domain
2 2 2 0 SCOP 75011 3-carboxy-cis,cis-mucoante lactonizing enzyme
2 1 1 1 SCOP 110395 CutC-like
2 2 1 0 SCOP 50974 Nitrous oxide reductase, N-terminal domain
2 2 1 0 SCOP 160104 Acetoacetate decarboxylase-like
2 2 2 1 SCOP 100939 SPOC domain-like
2 2 1 1 SCOP 56726 DNA topoisomerase IV, alpha subunit
2 2 2 0 SCOP 102198 Putative cyclase
2 2 2 0 SCOP 82704 AlbA-like
2 2 2 0 SCOP 50346 PRC-barrel domain
2 2 2 0 SCOP 143437 THUMP domain-like
2 2 2 0 SCOP 110455 Toprim domain
2 1 1 0 SCOP 55895 Ribonuclease Rh-like
2 2 2 0 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
2 2 2 0 SCOP 158832 Tex N-terminal region-like
2 2 2 0 SCOP 69304 Tricorn protease N-terminal domain
2 2 1 1 SCOP 52009 Phosphohistidine domain
2 1 1 0 SCOP 53681 Aspartate/glutamate racemase
2 2 2 0 SCOP 48056 Di-copper centre-containing domain
2 2 1 0 SCOP 47162 Apolipoprotein
2 2 2 0 SCOP 141673 MOSC N-terminal domain-like
2 2 1 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
2 2 2 0 SCOP 51110 alpha-D-mannose-specific plant lectins
2 2 2 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
2 2 2 1 SCOP 110019 ERO1-like
2 2 1 1 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
2 2 2 0 SCOP 53920 Fe-only hydrogenase
2 1 1 0 SCOP 54810 GMP synthetase C-terminal dimerisation domain
2 2 2 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
2 2 2 0 SCOP 144083 Magnesium transport protein CorA, transmembrane region
2 2 2 0 SCOP 110836 Hypothetical protein SAV1430
2 2 1 0 SCOP 75689 Zinc-binding domain of translation initiation factor 2 beta
2 2 2 0 SCOP 140860 Pseudo ankyrin repeat-like
2 2 2 0 SCOP 56973 Aerolisin/ETX pore-forming domain
2 2 1 0 SCOP 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
2 1 1 0 SCOP 55116 Formiminotransferase domain of formiminotransferase-cyclodeaminase.
2 2 2 0 SCOP 81624 N-terminal domain of MutM-like DNA repair proteins
2 2 1 0 SCOP 54782 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
2 2 1 0 SCOP 102735 Trigger factor ribosome-binding domain
2 2 2 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
2 2 2 0 SCOP 49742 PHM/PNGase F
2 2 1 0 SCOP 54991 Anticodon-binding domain of PheRS
2 2 1 0 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
2 2 1 0 SCOP 47938 Functional domain of the splicing factor Prp18
2 2 2 0 SCOP 57889 Cysteine-rich domain
2 2 2 0 SCOP 57440 Kringle-like
2 2 2 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
2 2 1 0 SCOP 88798 N-terminal, heterodimerisation domain of RBP7 (RpoE)
2 2 2 1 SCOP 47216 Proteasome activator
2 2 2 0 SCOP 47050 VHP, Villin headpiece domain
2 2 2 1 SCOP 101233 PWI domain
2 2 1 0 SCOP 54529 Mitochondrial glycoprotein MAM33-like
2 1 1 0 SCOP 49749 Group II dsDNA viruses VP
2 2 2 1 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
2 2 2 1 SCOP 110993 eIF-2-alpha, C-terminal domain
2 2 2 0 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
2 2 1 0 SCOP 50784 Transcription factor IIA (TFIIA), beta-barrel domain
2 2 1 1 SCOP 50989 Clathrin heavy-chain terminal domain
2 2 1 1 SCOP 101391 Hsp90 co-chaperone CDC37
2 2 2 1 SCOP 47212 FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
2 2 2 0 SCOP 57424 LDL receptor-like module
2 2 1 0 SCOP 48034 Guanido kinase N-terminal domain
2 2 2 1 SCOP 56741 Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
2 2 2 0 SCOP 55711 Subdomain of clathrin and coatomer appendage domain
2 2 2 0 SCOP 55003 PAP/Archaeal CCA-adding enzyme, C-terminal domain
2 1 1 0 SCOP 82615 Polo-box domain
2 2 1 0 SCOP 140612 EB1 dimerisation domain-like
2 2 2 1 SCOP 54585 Cdc48 domain 2-like
2 2 1 0 SCOP 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain
2 2 2 0 SCOP 101790 Aminomethyltransferase beta-barrel domain
2 2 1 0 SCOP 89009 GAT-like domain
2 2 2 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
2 2 1 1 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
2 2 1 0 SCOP 54364 Translation initiation factor IF3, N-terminal domain
2 2 2 0 SCOP 46915 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
2 2 2 0 SCOP 47587 Domain of poly(ADP-ribose) polymerase
1 1 1 0 SCOP 56731 DNA primase core
1 1 1 1 SCOP 47973 Ribosomal protein S7
1 1 1 0 SCOP 46911 Ribosomal protein S18
1 1 1 0 SCOP 142433 CinA-like
1 1 1 1 SCOP 54686 Ribosomal protein L16p/L10e
1 1 1 1 SCOP 50193 Ribosomal protein L14
1 1 1 1 SCOP 55282 RL5-like
1 1 1 1 SCOP 103491 Preprotein translocase SecY subunit
1 1 1 0 SCOP 57840 Ribosomal protein L36
1 1 1 0 SCOP 143034 L35p-like
1 1 1 0 SCOP 74731 Ribosomal protein L20
1 1 1 0 SCOP 82549 DAK1/DegV-like
1 1 1 0 SCOP 46992 Ribosomal protein S20
1 1 1 0 SCOP 89623 Ribose/Galactose isomerase RpiB/AlsB
1 1 1 1 SCOP 69765 IpsF-like
1 1 1 1 SCOP 111337 QueA-like
1 1 1 1 SCOP 56770 HydA/Nqo6-like
1 1 1 1 SCOP 56276 S-adenosylmethionine decarboxylase
1 1 1 1 SCOP 52313 Ribosomal protein S2
1 1 1 0 SCOP 54285 MoaD/ThiS
1 1 1 1 SCOP 142695 RibA-like
1 1 1 0 SCOP 64518 Phase 1 flagellin
1 1 1 0 SCOP 56935 Porins
1 1 1 1 SCOP 52121 Lumazine synthase
1 1 1 0 SCOP 117991 YbeD/HP0495-like
1 1 1 0 SCOP 55129 Ribosomal protein L30p/L7e
1 1 1 0 SCOP 75169 DsrEFH-like
1 1 1 0 SCOP 48140 Ribosomal protein L19 (L19e)
1 1 1 0 SCOP 144217 CSL zinc finger
1 1 1 0 SCOP 52042 Ribosomal protein L32e
1 1 1 0 SCOP 141678 MAL13P1.257-like
1 1 1 0 SCOP 47226 Histidine-containing phosphotransfer domain, HPT domain
1 1 1 0 SCOP 103456 Preprotein translocase SecE subunit
1 1 1 0 SCOP 140718 Mediator hinge subcomplex-like
1 1 1 0 SCOP 81524 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 111278 SSo0622-like
1 1 1 0 SCOP 81411 Mitochondrial cytochrome c oxidase subunit VIa
1 1 1 0 SCOP 81406 Mitochondrial cytochrome c oxidase subunit IV
1 1 1 0 SCOP 159468 AtpF-like
1 1 1 0 SCOP 63393 RNA polymerase subunits
1 1 1 0 SCOP 81514 Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 144000 Oxysterol-binding protein-like
1 1 1 0 SCOP 144210 Nop10-like SnoRNP
1 1 1 0 SCOP 69103 Arp2/3 complex 16 kDa subunit ARPC5
1 1 1 1 SCOP 51645 Malate synthase G
1 1 1 0 SCOP 81508 Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 161219 CHY zinc finger-like
1 1 1 0 SCOP 110849 ParB/Sulfiredoxin
1 1 1 0 SCOP 47694 Cytochrome c oxidase subunit h
1 1 1 0 SCOP 81343 Fumarate reductase respiratory complex transmembrane subunits
1 1 1 1 SCOP 69060 Arp2/3 complex 21 kDa subunit ARPC3
1 1 1 0 SCOP 103486 V-type ATP synthase subunit C
1 1 1 0 SCOP 143870 PF0523-like
1 1 1 0 SCOP 58113 Apolipoprotein A-I
1 1 1 0 SCOP 46924 RNA polymerase subunit RPB10
1 1 1 0 SCOP 69618 HemD-like
1 1 1 0 SCOP 143447 AMMECR1-like
1 1 1 0 SCOP 48690 Epsilon subunit of mitochondrial F1F0-ATP synthase
1 1 1 1 SCOP 63562 RPB6/omega subunit-like
1 1 1 0 SCOP 101960 Stabilizer of iron transporter SufD
1 1 1 0 SCOP 141734 HisI-like
1 1 1 0 SCOP 81342 Transmembrane di-heme cytochromes
1 1 1 1 SCOP 57662 Ferredoxin thioredoxin reductase (FTR), catalytic beta chain
1 1 1 0 SCOP 103451 PetN subunit of the cytochrome b6f complex
1 1 1 1 SCOP 81536 Subunit III of photosystem I reaction centre, PsaF
1 1 1 0 SCOP 141868 EAL domain-like
1 1 1 1 SCOP 53795 PEP carboxykinase-like
1 1 1 0 SCOP 55718 SCP-like
1 1 1 0 SCOP 160532 Ava3019-like
1 1 1 0 SCOP 47598 Ribbon-helix-helix
1 1 1 0 SCOP 55331 Tautomerase/MIF
1 1 1 0 SCOP 58100 Bacterial hemolysins
1 1 1 1 SCOP 56209 Nitrile hydratase alpha chain
1 1 1 0 SCOP 82697 PurS-like
1 1 1 0 SCOP 101744 Rof/RNase P subunit-like
1 1 1 0 SCOP 89550 PHP domain-like
1 1 1 0 SCOP 50692 ADC-like
1 1 1 0 SCOP 117782 YbjQ-like
1 1 1 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
1 1 1 0 SCOP 54690 Molybdopterin synthase subunit MoaE
1 1 1 0 SCOP 159501 EreA/ChaN-like
1 1 1 1 SCOP 103365 Hypothetical protein PH1602
1 1 1 1 SCOP 54111 Urease, gamma-subunit
1 1 1 1 SCOP 51278 Urease, beta-subunit
1 1 1 0 SCOP 143081 BB1717-like
1 1 1 1 SCOP 82544 GckA/TtuD-like
1 1 1 1 SCOP 53213 LigB-like
1 1 1 0 SCOP 109910 YgfY-like
1 1 1 0 SCOP 49472 Transthyretin (synonym: prealbumin)
1 1 1 0 SCOP 158694 UraD-Like
1 1 1 1 SCOP 118215 Proton glutamate symport protein
1 1 1 1 SCOP 160909 ATP12-like
1 1 1 0 SCOP 110069 ApaG-like
1 1 1 0 SCOP 56747 Prim-pol domain
1 1 1 1 SCOP 110581 Indigoidine synthase A-like
1 1 1 0 SCOP 117457 FumA C-terminal domain-like
1 1 1 0 SCOP 75138 HprK N-terminal domain-like
1 1 1 1 SCOP 56507 Methionine synthase activation domain-like
1 1 1 0 SCOP 53182 Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
1 1 1 1 SCOP 51703 Cobalamin (vitamin B12)-dependent enzymes
1 1 1 0 SCOP 101473 DhaL-like
1 1 1 0 SCOP 50486 FMT C-terminal domain-like
1 1 1 0 SCOP 159659 Cgl1923-like
1 1 1 0 SCOP 64076 MTH938-like
1 1 1 1 SCOP 56925 OMPA-like
1 1 1 0 SCOP 117070 LEA14-like
1 1 1 0 SCOP 75471 YhbY-like
1 1 1 0 SCOP 69754 Ribosome binding protein Y (YfiA homologue)
1 1 1 0 SCOP 50939 Sialidases
1 1 1 0 SCOP 140736 Rv1873-like
1 1 1 1 SCOP 56534 Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
1 1 1 0 SCOP 158710 PSPTO4464-like
1 1 1 0 SCOP 52038 Barstar-related
1 1 1 1 SCOP 160920 PSTPO5379-like
1 1 1 0 SCOP 46950 Double-stranded DNA-binding domain
1 1 1 0 SCOP 142535 AF0625-like
1 1 1 0 SCOP 160350 Rnp2-like
1 1 1 0 SCOP 49367 Superoxide reductase-like
1 1 1 0 SCOP 69819 MTH1598-like
1 1 1 0 SCOP 55287 RPB5-like RNA polymerase subunit
1 1 1 0 SCOP 116820 Rps17e-like
1 1 1 0 SCOP 160374 RplX-like
1 1 1 0 SCOP 69695 SRP19
1 1 1 1 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
1 1 1 0 SCOP 143865 CorA soluble domain-like
1 1 1 1 SCOP 69336 Alpha subunit of glutamate synthase, C-terminal domain
1 1 1 0 SCOP 53706 Formate dehydrogenase/DMSO reductase, domains 1-3
1 1 1 0 SCOP 48619 Phospholipase A2, PLA2
1 1 1 0 SCOP 54403 Cystatin/monellin
1 1 1 1 SCOP 82114 Riboflavin kinase-like
1 1 1 0 SCOP 141255 YccV-like
1 1 1 0 SCOP 158757 SMc04008-like
1 1 1 1 SCOP 102645 CoaB-like
1 1 1 0 SCOP 58026 Delta-sleep-inducing peptide immunoreactive peptide
1 1 1 0 SCOP 103190 Sensory domain-like
1 1 1 0 SCOP 47188 Hemerythrin-like
1 1 1 0 SCOP 54821 Ribosomal protein S3 C-terminal domain
1 1 1 1 SCOP 142877 EndoU-like
1 1 1 0 SCOP 118116 DNA mismatch repair protein MutL
1 1 1 0 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
1 1 1 0 SCOP 90257 Myosin rod fragments
1 1 1 0 SCOP 144206 NOB1 zinc finger-like
1 1 1 0 SCOP 141066 ICP-like
1 1 1 1 SCOP 68923 PEP carboxykinase N-terminal domain
1 1 1 0 SCOP 103359 Suppressor of Fused, N-terminal domain
1 1 1 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
1 1 1 0 SCOP 116726 TrkA C-terminal domain-like
1 1 1 0 SCOP 69055 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
1 1 1 0 SCOP 56037 PheT/TilS domain
1 1 1 1 SCOP 52418 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
1 1 1 0 SCOP 47090 PGBD-like
1 1 1 0 SCOP 75704 Mitotic arrest deficient-like 1, Mad1
1 1 1 1 SCOP 63999 Thiamin pyrophosphokinase, catalytic domain
1 1 1 0 SCOP 58022 XRCC4, C-terminal oligomerization domain
1 1 1 0 SCOP 142984 Nqo1 middle domain-like
1 1 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
1 1 1 1 SCOP 110111 Ctag/Cox11
1 1 1 0 SCOP 141086 Agglutinin HPA-like
1 1 1 0 SCOP 46966 Spectrin repeat
1 1 1 0 SCOP 81585 PsbU/PolX domain-like
1 1 1 0 SCOP 81891 Poly A polymerase C-terminal region-like
1 1 1 1 SCOP 101904 GyrA/ParC C-terminal domain-like
1 1 1 0 SCOP 143548 Serine metabolism enzymes domain
1 1 1 1 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
1 1 1 1 SCOP 140869 GUN4-like
1 1 1 0 SCOP 46600 C-terminal UvrC-binding domain of UvrB
1 1 1 0 SCOP 47144 HSC20 (HSCB), C-terminal oligomerisation domain
1 1 1 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
1 1 1 0 SCOP 47648 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
1 1 1 0 SCOP 110921 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
1 1 1 0 SCOP 69075 Glutamyl tRNA-reductase dimerization domain
1 1 1 0 SCOP 102875 Chromosomal protein MC1
1 1 1 0 SCOP 63882 MoeA N-terminal region -like
1 1 1 0 SCOP 56496 Fibrinogen C-terminal domain-like
1 1 1 0 SCOP 101278 N-terminal domain of adenylylcyclase associated protein, CAP
1 1 1 0 SCOP 47794 Rad51 N-terminal domain-like
1 1 1 0 SCOP 47933 ERP29 C domain-like
1 1 1 0 SCOP 140490 Nqo1C-terminal domain-like
1 1 1 1 SCOP 143975 IlvD/EDD N-terminal domain-like
1 1 1 0 SCOP 55904 Ornithine decarboxylase C-terminal domain
1 1 1 1 SCOP 56542 Substrate-binding domain of HMG-CoA reductase
1 1 1 1 SCOP 64397 Hsp33 domain
1 1 1 0 SCOP 116742 eIF2alpha middle domain-like
1 1 1 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
1 1 1 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
1 1 1 0 SCOP 160696 BTG domain-like
1 1 1 0 SCOP 48652 Tetraspanin
1 1 1 0 SCOP 50353 Cytokine
1 1 1 1 SCOP 89817 Mago nashi protein
1 1 1 0 SCOP 111347 Rap/Ran-GAP
1 1 1 0 SCOP 100895 Kazal-type serine protease inhibitors
1 1 1 1 SCOP 82109 MIR domain
1 1 1 0 SCOP 89837 Doublecortin (DC)
1 1 1 0 SCOP 57924 Inhibitor of apoptosis (IAP) repeat
1 1 1 0 SCOP 101690 PAZ domain
1 1 1 1 SCOP 140984 PTPA-like
1 1 1 0 SCOP 161065 ATP synthase D chain-like
1 1 1 0 SCOP 81730 beta-catenin-interacting protein ICAT
1 1 1 1 SCOP 140102 ISY1 domain-like
1 1 1 0 SCOP 47672 Transferrin receptor-like dimerisation domain
1 1 1 0 SCOP 81531 Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 116907 Hook domain
1 1 1 0 SCOP 143875 ERH-like
1 1 1 0 SCOP 140856 USP8 N-terminal domain-like
1 1 1 0 SCOP 63491 BAG domain
1 1 1 1 SCOP 142019 Nqo1 FMN-binding domain-like
1 1 1 0 SCOP 109925 Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain
1 1 1 0 SCOP 57774 Microbial and mitochondrial ADK, insert "zinc finger" domain
1 1 1 0 SCOP 69742 Glutamyl tRNA-reductase catalytic, N-terminal domain
1 1 1 0 SCOP 64496 DNA-binding domain of intron-encoded endonucleases
1 1 1 0 SCOP 47912 Wiscott-Aldrich syndrome protein, WASP, C-terminal domain
1 1 1 0 SCOP 160527 V-type ATPase subunit E-like
1 1 1 0 SCOP 53036 Eukaryotic RPB5 N-terminal domain
1 1 1 0 SCOP 81886 Helical scaffold and wing domains of SecA
1 1 1 0 SCOP 54556 Chitinase insertion domain
1 1 1 0 SCOP 140427 VPS28 C-terminal domain-like
1 1 1 0 SCOP 81872 BRCA2 helical domain
1 1 1 0 SCOP 101931 Pym (Within the bgcn gene intron protein, WIBG), N-terminal domain
1 1 1 0 SCOP 63501 Frizzled cysteine-rich domain
1 1 1 0 SCOP 143575 GAS2 domain-like
1 1 1 0 SCOP 89000 post-HMGL domain-like
1 1 1 0 SCOP 159042 Plus3-like
1 1 1 1 SCOP 88802 Pre-PUA domain
1 1 1 0 SCOP 69848 LCCL domain
1 1 1 0 SCOP 63862 Thiamin pyrophosphokinase, substrate-binding domain
1 1 1 0 SCOP 161245 Zinc hairpin stack
1 1 1 0 SCOP 102860 mRNA decapping enzyme DcpS N-terminal domain
1 1 1 1 SCOP 63887 P-domain of calnexin/calreticulin
1 1 1 0 SCOP 101420 C-terminal domain of Ku80
1 1 1 0 SCOP 160897 Taf5 N-terminal domain-like
1 1 1 0 SCOP 160219 AMPKBI-like
1 1 1 0 SCOP 140586 Dcp2 domain-like
1 1 1 0 SCOP 55653 Ribosomal protein L9 C-domain
1 1 1 0 SCOP 81496 Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
1 1 1 0 SCOP 81502 ISP transmembrane anchor
1 1 1 1 SCOP 74778 Aconitase B, N-terminal domain
1 1 1 0 SCOP 63433 Fumarylacetoacetate hydrolase, FAH, N-terminal domain
1 1 1 1 SCOP 47644 Methionine synthase domain
1 1 1 0 SCOP 101821 Aminopeptidase/glucanase lid domain
1 1 1 0 SCOP 53150 DNA repair protein MutS, domain II
1 1 1 1 SCOP 81767 Pre-protein crosslinking domain of SecA
1 1 1 0 SCOP 81799 Putative methyltransferase TM0872, insert domain
1 1 1 0 SCOP 102741 Obg GTP-binding protein C-terminal domain
1 1 1 0 SCOP 101224 HAND domain of the nucleosome remodeling ATPase ISWI
1 1 1 0 SCOP 109736 FGAM synthase PurL, linker domain
1 1 1 0 SCOP 160996 HI0933 insert domain-like
1 1 1 0 SCOP 101238 XPC-binding domain
1 1 1 0 SCOP 57770 Methionyl-tRNA synthetase (MetRS), Zn-domain
1 1 1 0 SCOP 52913 RNA 3'-terminal phosphate cyclase, RPTC, insert domain
1 1 1 0 SCOP 158230 PRP4-like

Jump to [ Top of page · Assignment statistics ]


The following superfamilies have one or more weak hits:

SCOP superfamily Zinc finger domain of DNA polymerase-alpha
SCOP superfamily Notch domain
SCOP superfamily Somatomedin B domain
SCOP superfamily Hypothetical protein Yml108w
SCOP superfamily eEF1-gamma domain
SCOP superfamily DNA-binding protein Tfx
SCOP superfamily AbrB/MazE/MraZ-like
SCOP superfamily Collagen-binding domain
SCOP superfamily Gametocyte protein Pfg27
SCOP superfamily Sigma2 domain of RNA polymerase sigma factors
SCOP superfamily Sigma3 and sigma4 domains of RNA polymerase sigma factors
SCOP superfamily ssDNA viruses
SCOP superfamily Positive stranded ssRNA viruses
SCOP superfamily Tumor suppressor gene product Apc
SCOP superfamily MesJ substrate recognition domain-like
SCOP superfamily OsmC-like
SCOP superfamily Mechanosensitive channel protein MscS (YggB), C-terminal domain
SCOP superfamily Probable GTPase Der, C-terminal domain
SCOP superfamily Swiveling domain of dehydratase reactivase alpha subunit
SCOP superfamily FAS1 domain
SCOP superfamily BAH domain
SCOP superfamily Antigen MPT63/MPB63 (immunoprotective extracellular protein)
SCOP superfamily BRCA2 tower domain
SCOP superfamily SopE-like GEF domain
SCOP superfamily Crustacean CHH/MIH/GIH neurohormone
SCOP superfamily a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
SCOP superfamily Nucleotidyltransferase substrate binding subunit/domain
SCOP superfamily F1F0 ATP synthase subunit B, membrane domain
SCOP superfamily Photosystem I reaction center subunit XI, PsaL
SCOP superfamily Photosystem I subunits PsaA/PsaB
SCOP superfamily Cytochrome c oxidase subunit II-like, transmembrane region
SCOP superfamily Cytochrome c oxidase subunit III-like
SCOP superfamily Cytochrome c oxidase subunit I-like
SCOP superfamily ABC transporter involved in vitamin B12 uptake, BtuC
SCOP superfamily Gated mechanosensitive channel
SCOP superfamily Small-conductance potassium channel
SCOP superfamily H-NS histone-like proteins
SCOP superfamily Rad50 coiled-coil Zn hook
SCOP superfamily Chemotaxis phosphatase CheZ
SCOP superfamily VSV matrix protein
SCOP superfamily Plakin repeat
SCOP superfamily Rotavirus NSP2 fragment, C-terminal domain
SCOP superfamily Monomethylamine methyltransferase MtmB
SCOP superfamily Lamin A/C globular tail domain
SCOP superfamily Variable surface antigen VlsE
SCOP superfamily C-terminal domain of PLC-beta
SCOP superfamily Colicin E3 receptor domain
SCOP superfamily OMPT-like
SCOP superfamily Membrane penetration protein mu1
SCOP superfamily NSP3 homodimer
SCOP superfamily Thymidylate synthase-complementing protein Thy1
SCOP superfamily Integrin beta tail domain
SCOP superfamily Anti-sigma factor AsiA
SCOP superfamily Bcr-Abl oncoprotein oligomerization domain
SCOP superfamily RecG, N-terminal domain
SCOP superfamily Recombination endonuclease VII, C-terminal and dimerization domains
SCOP superfamily Rho N-terminal domain-like
SCOP superfamily F1 ATPase inhibitor, IF1, C-terminal domain
SCOP superfamily Intermediate filament protein, coiled coil region
SCOP superfamily SirA-like
SCOP superfamily Chorismate lyase-like
SCOP superfamily SurE-like
SCOP superfamily Pyridoxine 5'-phosphate synthase
SCOP superfamily Methuselah ectodomain
SCOP superfamily SAND domain-like
SCOP superfamily Telomeric repeat binding factor (TRF) dimerisation domain
SCOP superfamily Flagellar transcriptional activator FlhD
SCOP superfamily PTS-regulatory domain, PRD
SCOP superfamily Outer surface protein C (OspC)
SCOP superfamily Type I dockerin domain
SCOP superfamily MurE/MurF N-terminal domain
SCOP superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain
SCOP superfamily Clostridium neurotoxins, "coiled-coil" domain
SCOP superfamily Variant surface glycoprotein (N-terminal domain)
SCOP superfamily Influenza hemagglutinin (stalk)
SCOP superfamily N-terminal coiled coil domain from apc
SCOP superfamily Fibritin
SCOP superfamily Outer membrane lipoprotein
SCOP superfamily Coiled-coil dimerization domain from cortexillin I
SCOP superfamily Fibrinogen coiled-coil and central regions
SCOP superfamily Chicken cartilage matrix protein
SCOP superfamily Trimerization domain of TRAF
SCOP superfamily B-box zinc-binding domain
SCOP superfamily HIPIP (high potential iron protein)
SCOP superfamily GLA-domain
SCOP superfamily Thyroglobulin type-1 domain
SCOP superfamily TNF receptor-like
SCOP superfamily TB module/8-cys domain
SCOP superfamily Serine protease inhibitors
SCOP superfamily Complement control module/SCR domain
SCOP superfamily Granulin repeat
SCOP superfamily Elafin-like
SCOP superfamily Insulin-like
SCOP superfamily Lipovitellin-phosvitin complex; beta-sheet shell regions
SCOP superfamily Outer membrane efflux proteins (OEP)
SCOP superfamily delta-Endotoxin (insectocide), N-terminal domain
SCOP superfamily Reovirus inner layer core protein p3
SCOP superfamily HydB/Nqo4-like
SCOP superfamily Non-globular alpha+beta subunits of globular proteins
SCOP superfamily Major capsid protein gp5
SCOP superfamily A heparin-binding domain
SCOP superfamily Ribosome inactivating proteins (RIP)
SCOP superfamily DmpA/ArgJ-like
SCOP superfamily CytB endotoxin-like
SCOP superfamily Hedgehog/DD-peptidase
SCOP superfamily Allophycocyanin linker chain (domain)
SCOP superfamily Amine oxidase N-terminal region
SCOP superfamily Superantigen toxins, C-terminal domain
SCOP superfamily Staphylokinase/streptokinase
SCOP superfamily LysM domain
SCOP superfamily Prion-like
SCOP superfamily RNase A-like
SCOP superfamily Microbial ribonucleases
SCOP superfamily FucI/AraA N-terminal and middle domains
SCOP superfamily Nitrogenase accessory factor-like
SCOP superfamily TolB, N-terminal domain
SCOP superfamily Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
SCOP superfamily Type II 3-dehydroquinate dehydratase
SCOP superfamily Bacterial luciferase-like
SCOP superfamily Xylose isomerase-like
SCOP superfamily An insect antifreeze protein
SCOP superfamily Insect cysteine-rich antifreeze protein
SCOP superfamily beta-Roll
SCOP superfamily Vitelline membrane outer protein-I (VMO-I)
SCOP superfamily Outer surface protein
SCOP superfamily Bacteriochlorophyll A protein
SCOP superfamily Carbohydrate binding domain
SCOP superfamily Thermostable phytase (3-phytase)
SCOP superfamily Rap30/74 interaction domains
SCOP superfamily Herpes virus serine proteinase, assemblin
SCOP superfamily TIMP-like
SCOP superfamily C-terminal domain of transcriptional repressors
SCOP superfamily Baculovirus p35 protein
SCOP superfamily TNF-like
SCOP superfamily Virus attachment protein globular domain
SCOP superfamily Viral protein domain
SCOP superfamily Cna protein B-type domain
SCOP superfamily p53-like transcription factors
SCOP superfamily Invasin/intimin cell-adhesion fragments
SCOP superfamily Cadherin-like
SCOP superfamily Transglutaminase, two C-terminal domains
SCOP superfamily PKD domain
SCOP superfamily Immunoglobulin
SCOP superfamily Multiheme cytochromes
SCOP superfamily Moesin tail domain
SCOP superfamily Fe-only hydrogenase smaller subunit
SCOP superfamily Transducin (heterotrimeric G protein), gamma chain
SCOP superfamily Methanol dehydrogenase subunit
SCOP superfamily Nuclear receptor ligand-binding domain
SCOP superfamily Tetracyclin repressor-like, C-terminal domain
SCOP superfamily Cytochrome c oxidase subunit E
SCOP superfamily Bacterial muramidases
SCOP superfamily Lipovitellin-phosvitin complex, superhelical domain
SCOP superfamily TrpR-like
SCOP superfamily Uteroglobin-like
SCOP superfamily Transcription factor STAT-4 N-domain
SCOP superfamily FliG
SCOP superfamily Bacteriocin AS-48
SCOP superfamily Apolipophorin-III
SCOP superfamily Chemotaxis receptor methyltransferase CheR, N-terminal domain
SCOP superfamily Protein HNS-dependent expression A; HdeA
SCOP superfamily IHF-like DNA-binding proteins
SCOP superfamily Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
SCOP superfamily N-terminal domain of cbl (N-cbl)
SCOP superfamily STAT
SCOP superfamily Transcription factor IIA (TFIIA), alpha-helical domain
SCOP superfamily 4-helical cytokines
SCOP superfamily TMV-like viral coat proteins
SCOP superfamily Cytochromes
SCOP superfamily Aspartate receptor, ligand-binding domain
SCOP superfamily Methane monooxygenase hydrolase, gamma subunit
SCOP superfamily Diol dehydratase, gamma subunit
SCOP superfamily RAP domain-like
SCOP superfamily Tubulin chaperone cofactor A
SCOP superfamily C-terminal effector domain of the bipartite response regulators
SCOP superfamily Epsilon subunit of F1F0-ATP synthase C-terminal domain
SCOP superfamily HR1 repeat
SCOP superfamily PspA lactotransferrin-binding region
SCOP superfamily Gam-like
SCOP superfamily RILP dimerisation region
SCOP superfamily E6 C-terminal domain-like
SCOP superfamily YfgJ-like
SCOP superfamily MetI-like
SCOP superfamily MgtE membrane domain-like
SCOP superfamily ATP synthase B chain-like
SCOP superfamily PsbZ-like
SCOP superfamily flu NP-like
SCOP superfamily CV3147-like
SCOP superfamily AF1531-like
SCOP superfamily YacF-like
SCOP superfamily Api92-like
SCOP superfamily VPA0735-like
SCOP superfamily Rv2827c C-terminal domain-like
SCOP superfamily Lp2179-like
SCOP superfamily YehR-like
SCOP superfamily BB2672-like
SCOP superfamily BRK domain-like
SCOP superfamily NMB0513-like
SCOP superfamily BLRF2-like
SCOP superfamily SP0830-like
SCOP superfamily NMB0488-like
SCOP superfamily YgaC/TfoX-N like
SCOP superfamily YdgH-like
SCOP superfamily CbiG N-terminal domain-like
SCOP superfamily PA1994-like
SCOP superfamily AttH-like
SCOP superfamily HIN-2000 domain-like
SCOP superfamily Dom34/Pelota N-terminal domain-like
SCOP superfamily Mib/herc2 domain-like
SCOP superfamily Lipase chaperone-like
SCOP superfamily MgtE N-terminal domain-like
SCOP superfamily YheA/YmcA-like
SCOP superfamily RbcX-like
SCOP superfamily AF1862-like
SCOP superfamily TAFH domain-like
SCOP superfamily DnaD domain-like
SCOP superfamily IVS-encoded protein-like
SCOP superfamily Ta0600-like
SCOP superfamily SO2669-like
SCOP superfamily occludin/ELL-like
SCOP superfamily Sec2 N-terminal region
SCOP superfamily Vanabin-like
SCOP superfamily Heme iron utilization protein-like
SCOP superfamily Thermophilic metalloprotease-like
SCOP superfamily FdhE-like
SCOP superfamily Peptidoglycan deacetylase N-terminal noncatalytic region
SCOP superfamily ORC1-binding domain
SCOP superfamily UbiD C-terminal domain-like
SCOP superfamily RGC domain-like
SCOP superfamily XisI-like
SCOP superfamily YwmB-like
SCOP superfamily GlcG-like
SCOP superfamily YeeU-like
SCOP superfamily TRCF domain-like
SCOP superfamily YgbK-like
SCOP superfamily L,D-transpeptidase catalytic domain-like
SCOP superfamily CarD-like
SCOP superfamily Atu1913-like
SCOP superfamily Topoisomerase V catalytic domain-like
SCOP superfamily Duffy binding domain-like
SCOP superfamily PriB N-terminal domain-like
SCOP superfamily TROVE domain-like
SCOP superfamily Rhabdovirus nucleoprotein-like
SCOP superfamily AF0941-like
SCOP superfamily IpaD-like
SCOP superfamily YfmB-like
SCOP superfamily Hyaluronidase post-catalytic domain-like
SCOP superfamily Type III secretion system domain
SCOP superfamily MukF C-terminal domain-like
SCOP superfamily FlgN-like
SCOP superfamily BAS1536-like
SCOP superfamily PA2201 N-terminal domain-like
SCOP superfamily EsxAB dimer-like
SCOP superfamily MW0975(SA0943)-like
SCOP superfamily YppE-like
SCOP superfamily ChaB-like
SCOP superfamily Rabenosyn-5 Rab-binding domain-like
SCOP superfamily Calcyclin-binding protein-like
SCOP superfamily Synuclein
SCOP superfamily Variant surface glycoprotein MITAT 1.2, VSG 221, C-terminal domain
SCOP superfamily Connexin43
SCOP superfamily RalF, C-terminal domain
SCOP superfamily GTF2I-like repeat
SCOP superfamily Putative glucosidase YicI, C-terminal domain
SCOP superfamily Hypothetical protein MPN330
SCOP superfamily TrmE connector domain
SCOP superfamily XseB-like
SCOP superfamily DNA-binding domain of EIN3-like
SCOP superfamily DNA methylase specificity domain
SCOP superfamily Fzo-like conserved region
SCOP superfamily Coronavirus S2 glycoprotein
SCOP superfamily Geminin coiled-coil domain
SCOP superfamily YAP1 redox domain
SCOP superfamily Hormone receptor domain
SCOP superfamily Pollen allergen ole e 6
SCOP superfamily OmpH-like
SCOP superfamily HlyD-like secretion proteins
SCOP superfamily CbiD-like
SCOP superfamily Putative modulator of DNA gyrase, PmbA/TldD
SCOP superfamily Rbstp2229 protein
SCOP superfamily TmoB-like
SCOP superfamily Glycerate kinase I
SCOP superfamily TTHA0583/YokD-like
SCOP superfamily GlpP-like
SCOP superfamily AbfB domain
SCOP superfamily BTV NS2-like ssRNA-binding domain
SCOP superfamily DR1885-like metal-binding protein
SCOP superfamily Her-1
SCOP superfamily I/LWEQ domain
SCOP superfamily DinB/YfiT-like putative metalloenzymes
SCOP superfamily Phenylalanine zipper
SCOP superfamily Hypothetical protein D-63
SCOP superfamily Bacteriocin immunity protein-like
SCOP superfamily Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain
SCOP superfamily PhoU-like
SCOP superfamily Alpha-hemoglobin stabilizing protein AHSP
SCOP superfamily DnaK suppressor protein DksA, alpha-hairpin domain
SCOP superfamily G protein-binding domain
SCOP superfamily CCHHC domain
SCOP superfamily Plexin repeat
SCOP superfamily Autotransporter
SCOP superfamily Respiratory nitrate reductase 1 gamma chain
SCOP superfamily PetM subunit of the cytochrome b6f complex
SCOP superfamily Major capsid protein VP5
SCOP superfamily Virulence-associated V antigen
SCOP superfamily KA1-like
SCOP superfamily Hypothetical protein c14orf129, hspc210
SCOP superfamily Cell division protein ZapA-like
SCOP superfamily LmbE-like
SCOP superfamily Alpha-2,3/8-sialyltransferase CstII
SCOP superfamily (2r)-phospho-3-sulfolactate synthase ComA
SCOP superfamily Trimeric adhesin
SCOP superfamily Adhesin YadA, collagen-binding domain
SCOP superfamily NAC domain
SCOP superfamily Replicase NSP9
SCOP superfamily Hypothetical protein YfhH
SCOP superfamily Anti-sigma factor FlgM
SCOP superfamily Stathmin
SCOP superfamily Hypothetical protein ST1625
SCOP superfamily Superantigen MAM
SCOP superfamily Hypothetical protein MTH393
SCOP superfamily YutG-like
SCOP superfamily Methenyltetrahydrofolate cyclohydrolase-like
SCOP superfamily Plant invertase/pectin methylesterase inhibitor
SCOP superfamily Typo IV secretion system protein TraC
SCOP superfamily Chemosensory protein Csp2
SCOP superfamily IP3 receptor type 1 binding core, domain 2

Jump to [ Top of page · Assignment statistics ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.