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  Home > Genomes > Superfamily assignments for Ixodes scapularis


Ixodes scapularis superfamily assignments

Taxonomy
Taxonomy browser entry

Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Protostomia; Ecdysozoa; Panarthropoda; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Ixodinae; Ixodes; Ixodes scapularis

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Fasta format sequences
Domain assignments

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Assignment statistics

Sequences: 20486 total
10159 (50 %) with assignment
284 average length
43 % amino acid coverage
Domains: 15525 total
985 unique superfamilies
841 unique families
248 average length
15.8 average superfamily size
94 % formed by duplication
Domain combinations: 1040 domain pairs
3204 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies
781 683 135 12 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
777 296 71 0 SCOP 57667 beta-beta-alpha zinc fingers
645 249 87 0 SCOP 48726 Immunoglobulin
337 310 24 6 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
289 276 15 1 SCOP 103473 MFS general substrate transporter
254 249 81 3 SCOP 56112 Protein kinase-like (PK-like)
244 244 12 11 SCOP 53474 alpha/beta-Hydrolases
234 233 5 1 SCOP 48264 Cytochrome P450
225 190 53 13 SCOP 48371 ARM repeat
215 210 37 7 SCOP 51735 NAD(P)-binding Rossmann-fold domains
189 178 39 1 SCOP 50978 WD40 repeat-like
188 101 66 1 SCOP 49265 Fibronectin type III
178 21 21 0 SCOP 49313 Cadherin-like
175 158 55 3 SCOP 57850 RING/U-box
169 143 33 4 SCOP 46689 Homeodomain-like
168 166 14 14 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
167 165 10 1 SCOP 81321 Family A G protein-coupled receptor-like
158 122 35 1 SCOP 54928 RNA-binding domain, RBD
156 55 44 0 SCOP 57196 EGF/Laminin
152 137 88 9 SCOP 50729 PH domain-like
149 112 25 8 SCOP 52833 Thioredoxin-like
149 105 35 2 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
139 44 32 0 SCOP 57424 LDL receptor-like module
138 135 17 1 SCOP 50494 Trypsin-like serine proteases
138 90 16 0 SCOP 57362 BPTI-like
136 97 34 2 SCOP 48452 TPR-like
125 123 6 1 SCOP 56801 Acetyl-CoA synthetase-like
123 111 37 4 SCOP 47473 EF-hand
123 120 32 7 SCOP 51445 (Trans)glycosidases
120 99 30 1 SCOP 52058 L domain-like
118 95 24 1 SCOP 52047 RNI-like
114 100 48 1 SCOP 48403 Ankyrin repeat
108 69 48 1 SCOP 50156 PDZ domain-like
101 57 34 8 SCOP 81296 E set domains
100 66 32 4 SCOP 49899 Concanavalin A-like lectins/glucanases
94 44 32 0 SCOP 49854 Spermadhesin, CUB domain
90 40 27 0 SCOP 57535 Complement control module/SCR domain
89 85 34 8 SCOP 46785 "Winged helix" DNA-binding domain
88 87 9 8 SCOP 53448 Nucleotide-diphospho-sugar transferases
86 85 23 5 SCOP 53098 Ribonuclease H-like
86 73 41 5 SCOP 54236 Ubiquitin-like
85 63 53 1 SCOP 50044 SH3-domain
83 71 24 5 SCOP 51905 FAD/NAD(P)-binding domain
81 78 30 8 SCOP 54001 Cysteine proteinases
79 79 5 3 SCOP 53649 Alkaline phosphatase-like
76 54 39 2 SCOP 49562 C2 domain (Calcium/lipid-binding domain, CaLB)
74 59 41 1 SCOP 57903 FYVE/PHD zinc finger
72 49 16 0 SCOP 90123 ABC transporter transmembrane region
72 47 18 0 SCOP 57625 Invertebrate chitin-binding proteins
71 45 14 5 SCOP 53067 Actin-like ATPase domain
68 56 17 2 SCOP 49599 TRAF domain-like
67 57 33 4 SCOP 50249 Nucleic acid-binding proteins
66 50 21 0 SCOP 81324 Voltage-gated potassium channels
64 62 11 4 SCOP 56300 Metallo-dependent phosphatases
64 63 12 4 SCOP 56672 DNA/RNA polymerases
62 59 27 2 SCOP 54695 POZ domain
58 32 28 1 SCOP 57184 Growth factor receptor domain
56 11 11 1 SCOP 46966 Spectrin repeat
56 53 13 1 SCOP 52087 CRAL/TRIO domain
55 55 10 1 SCOP 47616 GST C-terminal domain-like
55 38 22 2 SCOP 63748 Tudor/PWWP/MBT
54 50 27 7 SCOP 49785 Galactose-binding domain-like
53 51 19 3 SCOP 53187 Zn-dependent exopeptidases
53 47 24 3 SCOP 52799 (Phosphotyrosine protein) phosphatases II
52 48 8 6 SCOP 53383 PLP-dependent transferases
52 39 7 0 SCOP 57567 Serine protease inhibitors
51 49 5 1 SCOP 50814 Lipocalins
50 48 15 1 SCOP 53822 Periplasmic binding protein-like I
50 36 8 2 SCOP 52777 CoA-dependent acyltransferases
49 49 7 4 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
47 44 3 1 SCOP 56574 Serpins
47 47 11 1 SCOP 47459 HLH, helix-loop-helix DNA-binding domain
45 44 16 2 SCOP 53850 Periplasmic binding protein-like II
44 37 15 1 SCOP 117281 Kelch motif
43 43 26 1 SCOP 81383 F-box domain
43 19 12 1 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
42 41 9 2 SCOP 56219 DNase I-like
42 34 17 0 SCOP 57756 Retrovirus zinc finger-like domains
42 10 10 0 SCOP 82895 TSP-1 type 1 repeat
41 40 4 1 SCOP 161070 SNF-like
41 37 9 1 SCOP 90112 Neurotransmitter-gated ion-channel transmembrane pore
41 34 23 1 SCOP 47769 SAM/Pointed domain
39 37 8 3 SCOP 54495 UBC-like
39 38 27 2 SCOP 48350 GTPase activation domain, GAP
38 36 24 6 SCOP 54211 Ribosomal protein S5 domain 2-like
38 32 28 1 SCOP 55550 SH2 domain
38 36 7 0 SCOP 63712 Nicotinic receptor ligand binding domain-like
37 25 10 3 SCOP 47954 Cyclin-like
36 36 2 1 SCOP 103506 Mitochondrial carrier
36 34 11 2 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
36 21 11 1 SCOP 47923 Ypt/Rab-GAP domain of gyp1p
35 32 6 2 SCOP 57501 Cystine-knot cytokines
34 33 6 0 SCOP 54556 Chitinase insertion domain
33 32 18 2 SCOP 55681 Class II aaRS and biotin synthetases
32 31 5 1 SCOP 51395 FMN-linked oxidoreductases
31 31 14 6 SCOP 56784 HAD-like
31 30 18 3 SCOP 52374 Nucleotidylyl transferase
31 27 14 1 SCOP 51206 cAMP-binding domain-like
30 30 10 2 SCOP 51197 Clavaminate synthase-like
30 26 10 1 SCOP 55073 Nucleotide cyclase
30 29 7 0 SCOP 46938 CRAL/TRIO N-terminal domain
29 28 14 1 SCOP 46565 Chaperone J-domain
28 22 9 1 SCOP 47095 HMG-box
28 26 20 0 SCOP 46934 UBA-like
28 16 15 0 SCOP 52113 BRCT domain
28 21 18 0 SCOP 57889 Cysteine-rich domain
27 27 6 1 SCOP 49764 HSP20-like chaperones
27 27 2 1 SCOP 56496 Fibrinogen C-terminal domain-like
26 26 9 1 SCOP 88713 Glycoside hydrolase/deacetylase
25 25 15 3 SCOP 103657 BAR/IMD domain-like
25 25 5 0 SCOP 52980 Restriction endonuclease-like
25 25 7 2 SCOP 47113 Histone-fold
25 25 5 1 SCOP 56317 Carbon-nitrogen hydrolase
25 23 8 1 SCOP 48113 Heme-dependent peroxidases
25 25 12 1 SCOP 47576 Calponin-homology domain, CH-domain
25 25 17 3 SCOP 53300 vWA-like
25 25 13 1 SCOP 54373 FAD-linked reductases, C-terminal domain
25 17 15 1 SCOP 47370 Bromodomain
25 16 12 0 SCOP 100895 Kazal-type serine protease inhibitors
25 9 8 0 SCOP 57603 FnI-like domain
24 23 3 1 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
24 22 14 2 SCOP 50447 Translation proteins
24 24 15 1 SCOP 64268 PX domain
24 23 12 0 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
24 18 7 1 SCOP 53901 Thiolase-like
24 23 9 6 SCOP 49417 p53-like transcription factors
23 22 7 1 SCOP 50129 GroES-like
22 21 5 1 SCOP 53720 ALDH-like
22 9 7 2 SCOP 55753 Actin depolymerizing proteins
22 21 9 3 SCOP 55961 Bet v1-like
22 16 12 0 SCOP 55785 PYP-like sensor domain (PAS domain)
22 14 11 0 SCOP 57414 Hairpin loop containing domain-like
21 19 7 3 SCOP 52096 ClpP/crotonase
21 16 6 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
21 21 19 1 SCOP 48065 DBL homology domain (DH-domain)
21 21 7 0 SCOP 101576 Supernatant protein factor (SPF), C-terminal domain
21 12 8 0 SCOP 56968 Lipovitellin-phosvitin complex; beta-sheet shell regions
21 14 11 0 SCOP 51045 WW domain
20 20 11 1 SCOP 74650 Galactose mutarotase-like
20 20 8 1 SCOP 48508 Nuclear receptor ligand-binding domain
20 14 9 0 SCOP 90229 CCCH zinc finger
19 18 4 4 SCOP 51182 RmlC-like cupins
19 19 13 1 SCOP 49879 SMAD/FHA domain
19 19 12 0 SCOP 82199 SET domain
19 12 12 1 SCOP 54768 dsRNA-binding domain-like
19 19 4 0 SCOP 48652 Tetraspanin
19 19 4 0 SCOP 57959 Leucine zipper domain
18 17 10 4 SCOP 56059 Glutathione synthetase ATP-binding domain-like
18 17 8 1 SCOP 58038 SNARE fusion complex
18 8 8 1 SCOP 63825 YWTD domain
18 17 8 0 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
18 18 1 0 SCOP 56973 Aerolisin/ETX pore-forming domain
18 7 6 0 SCOP 50911 Mannose 6-phosphate receptor domain
17 17 9 5 SCOP 51556 Metallo-dependent hydrolases
17 17 6 1 SCOP 50891 Cyclophilin-like
17 17 10 1 SCOP 81665 Calcium ATPase, transmembrane domain M
17 17 5 1 SCOP 55307 Tubulin C-terminal domain-like
17 4 3 0 SCOP 57277 Granulin repeat
16 14 3 3 SCOP 100950 NagB/RpiA/CoA transferase-like
16 15 7 1 SCOP 55811 Nudix
16 16 4 1 SCOP 50182 Sm-like ribonucleoproteins
16 16 7 4 SCOP 64356 SNARE-like
16 16 4 0 SCOP 48619 Phospholipase A2, PLA2
16 16 11 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
16 15 11 0 SCOP 51011 Glycosyl hydrolase domain
16 11 4 0 SCOP 161093 MgtE membrane domain-like
16 4 4 2 SCOP 47220 alpha-catenin/vinculin-like
15 11 7 3 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
15 14 12 3 SCOP 81301 Nucleotidyltransferase
15 8 6 0 SCOP 82153 FAS1 domain
15 15 4 1 SCOP 52490 Tubulin nucleotide-binding domain-like
14 14 7 1 SCOP 51695 PLC-like phosphodiesterases
14 14 5 1 SCOP 55931 Glutamine synthetase/guanido kinase
14 12 11 1 SCOP 56436 C-type lectin-like
14 10 9 0 SCOP 90209 Ran binding protein zinc finger-like
14 10 8 2 SCOP 54160 Chromo domain-like
14 13 11 1 SCOP 47031 Second domain of FERM
13 12 5 1 SCOP 81606 PP2C-like
13 12 6 2 SCOP 53254 Phosphoglycerate mutase-like
13 13 6 1 SCOP 109604 HD-domain/PDEase-like
13 13 10 2 SCOP 88697 PUA domain-like
13 11 4 2 SCOP 47203 Acyl-CoA dehydrogenase C-terminal domain-like
13 12 5 2 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
13 13 2 0 SCOP 54403 Cystatin/monellin
13 13 3 1 SCOP 55816 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
13 13 3 1 SCOP 117892 Band 7/SPFH domain
13 12 11 1 SCOP 48097 Regulator of G-protein signaling, RGS
13 13 8 1 SCOP 52025 PA domain
12 12 6 1 SCOP 50104 Translation proteins SH3-like domain
12 12 8 2 SCOP 52402 Adenine nucleotide alpha hydrolases-like
12 11 4 2 SCOP 56281 Metallo-hydrolase/oxidoreductase
12 10 6 0 SCOP 63829 Calcium-dependent phosphotriesterase
12 10 4 0 SCOP 141571 Pentapeptide repeat-like
12 12 12 3 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
12 12 3 1 SCOP 55797 PR-1-like
12 11 2 1 SCOP 118215 Proton glutamate symport protein
12 5 3 1 SCOP 63411 LuxS/MPP-like metallohydrolase
12 12 11 1 SCOP 52200 Toll/Interleukin receptor TIR domain
12 6 4 1 SCOP 54980 EF-G C-terminal domain-like
12 12 6 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
12 12 10 0 SCOP 144232 HIT/MYND zinc finger-like
12 12 8 1 SCOP 48431 Lipovitellin-phosvitin complex, superhelical domain
12 12 9 3 SCOP 48464 ENTH/VHS domain
12 12 9 1 SCOP 81653 Calcium ATPase, transduction domain A
11 11 7 0 SCOP 111331 NAD kinase/diacylglycerol kinase-like
11 10 5 2 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
11 11 4 2 SCOP 56645 Acyl-CoA dehydrogenase NM domain-like
11 6 5 0 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
11 11 9 1 SCOP 101898 NHL repeat
11 11 6 0 SCOP 68906 SAP domain
11 10 2 1 SCOP 63707 Ganglioside M2 (gm2) activator
11 3 3 0 SCOP 47862 Saposin
10 7 6 2 SCOP 53271 PRTase-like
10 10 6 1 SCOP 55120 Pseudouridine synthase
10 10 3 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
10 10 3 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
10 10 4 1 SCOP 102114 Radical SAM enzymes
10 10 1 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
10 10 6 1 SCOP 88723 PIN domain-like
10 10 3 1 SCOP 54648 DLC
10 10 6 1 SCOP 54534 FKBP-like
10 10 8 2 SCOP 48239 Terpenoid cyclases/Protein prenyltransferases
10 10 4 1 SCOP 50630 Acid proteases
10 10 7 1 SCOP 57997 Tropomyosin
10 8 3 1 SCOP 49329 Cu,Zn superoxide dismutase-like
10 10 8 0 SCOP 52151 FabD/lysophospholipase-like
10 10 6 0 SCOP 52954 Class II aaRS ABD-related
10 9 4 1 SCOP 51069 Carbonic anhydrase
10 8 5 2 SCOP 47413 lambda repressor-like DNA-binding domains
10 9 5 1 SCOP 51230 Single hybrid motif
10 9 4 0 SCOP 50022 ISP domain
10 10 6 0 SCOP 161111 Cation efflux protein transmembrane domain-like
10 10 6 4 SCOP 52467 DHS-like NAD/FAD-binding domain
10 8 8 1 SCOP 47781 RuvA domain 2-like
10 9 6 1 SCOP 51971 Nucleotide-binding domain
10 10 6 1 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
10 10 10 1 SCOP 48366 Ras GEF
10 10 4 1 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
10 10 5 0 SCOP 55031 Bacterial exopeptidase dimerisation domain
10 9 8 1 SCOP 101912 Sema domain
10 10 3 1 SCOP 47895 Transducin (alpha subunit), insertion domain
10 10 10 0 SCOP 47986 DEATH domain
10 6 6 0 SCOP 69179 Integrin domains
10 5 4 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
10 8 4 1 SCOP 55666 Ribonuclease PH domain 2-like
10 10 8 0 SCOP 158235 SOCS box-like
9 9 6 2 SCOP 52317 Class I glutamine amidotransferase-like
9 9 3 1 SCOP 81338 Aquaporin-like
9 9 1 1 SCOP 75304 Amidase signature (AS) enzymes
9 9 7 1 SCOP 55920 Creatinase/aminopeptidase
9 9 1 1 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
9 9 4 2 SCOP 56104 SAICAR synthase-like
9 9 6 2 SCOP 55315 L30e-like
9 8 4 2 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
9 2 2 0 SCOP 55008 HMA, heavy metal-associated domain
9 9 4 2 SCOP 52768 Arginase/deacetylase
9 9 3 1 SCOP 111352 Ammonium transporter
9 6 5 1 SCOP 56024 Phospholipase D/nuclease
9 9 5 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
9 9 7 2 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
9 9 2 2 SCOP 52029 GroEL apical domain-like
9 8 6 1 SCOP 81631 PAP/OAS1 substrate-binding domain
9 6 6 1 SCOP 74924 Cap-Gly domain
9 9 3 1 SCOP 101447 Formin homology 2 domain (FH2 domain)
9 9 7 1 SCOP 56204 Hect, E3 ligase catalytic domain
9 9 7 1 SCOP 101690 PAZ domain
9 9 2 0 SCOP 57095 Scorpion toxin-like
8 8 5 2 SCOP 54197 HIT-like
8 8 7 1 SCOP 52821 Rhodanese/Cell cycle control phosphatase
8 8 4 1 SCOP 64005 Undecaprenyl diphosphate synthase
8 6 4 1 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
8 8 3 0 SCOP 46579 Prefoldin
8 7 4 1 SCOP 144000 Oxysterol-binding protein-like
8 8 5 0 SCOP 48208 Six-hairpin glycosidases
8 8 4 1 SCOP 111126 Ligand-binding domain in the NO signalling and Golgi transport
8 7 6 0 SCOP 144091 Rhomboid-like
8 7 6 1 SCOP 57783 Zinc beta-ribbon
8 6 5 0 SCOP 69065 RNase III domain-like
8 6 6 1 SCOP 51338 Composite domain of metallo-dependent hydrolases
8 8 5 1 SCOP 82171 DPP6 N-terminal domain-like
8 8 1 1 SCOP 48592 GroEL equatorial domain-like
8 8 5 1 SCOP 50370 Ricin B-like lectins
8 8 5 1 SCOP 47661 t-snare proteins
8 7 3 1 SCOP 52129 Caspase-like
8 3 3 1 SCOP 90257 Myosin rod fragments
8 8 5 1 SCOP 48225 Seven-hairpin glycosidases
8 8 6 2 SCOP 63380 Riboflavin synthase domain-like
8 4 4 0 SCOP 57610 Thyroglobulin type-1 domain
8 5 4 1 SCOP 158702 Sec63 N-terminal domain-like
8 8 4 1 SCOP 74788 Cullin repeat-like
8 3 3 1 SCOP 141072 CalX-like
8 8 3 0 SCOP 111418 Hormone receptor domain
8 7 5 1 SCOP 116846 MIT domain
8 7 6 1 SCOP 49447 Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
8 2 2 1 SCOP 81698 FF domain
8 8 1 0 SCOP 54849 GroEL-intermediate domain like
8 5 4 0 SCOP 49309 Transglutaminase, two C-terminal domains
7 7 4 0 SCOP 57829 Zn-binding ribosomal proteins
7 6 2 2 SCOP 53613 Ribokinase-like
7 7 5 2 SCOP 53137 Translational machinery components
7 4 2 0 SCOP 81333 F1F0 ATP synthase subunit C
7 5 5 0 SCOP 47060 S15/NS1 RNA-binding domain
7 7 2 1 SCOP 55298 YjgF-like
7 7 2 1 SCOP 48576 Terpenoid synthases
7 7 3 2 SCOP 51419 PLP-binding barrel
7 7 5 1 SCOP 50985 RCC1/BLIP-II
7 4 4 0 SCOP 51126 Pectin lyase-like
7 7 2 1 SCOP 49777 PEBP-like
7 7 7 1 SCOP 54631 CBS-domain pair
7 7 5 2 SCOP 46955 Putative DNA-binding domain
7 6 4 1 SCOP 81901 HCP-like
7 7 5 1 SCOP 103025 Folate-binding domain
7 7 2 1 SCOP 56534 Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
7 7 5 2 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
7 7 2 2 SCOP 48019 post-AAA+ oligomerization domain-like
7 7 4 0 SCOP 49464 Carboxypeptidase regulatory domain-like
7 7 3 1 SCOP 50621 Alanine racemase C-terminal domain-like
7 7 4 4 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
7 7 5 0 SCOP 54171 DNA-binding domain
7 4 4 0 SCOP 49299 PKD domain
7 7 4 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
7 7 7 0 SCOP 57845 B-box zinc-binding domain
7 7 5 0 SCOP 57302 Snake toxin-like
7 7 5 1 SCOP 111347 Rap/Ran-GAP
7 7 6 1 SCOP 140741 RUN domain-like
7 6 5 0 SCOP 103575 Plexin repeat
7 5 4 1 SCOP 57924 Inhibitor of apoptosis (IAP) repeat
7 7 4 0 SCOP 47672 Transferrin receptor-like dimerisation domain
7 7 5 0 SCOP 88688 Families 57/38 glycoside transferase middle domain
7 7 5 1 SCOP 63501 Frizzled cysteine-rich domain
7 6 4 1 SCOP 49758 Calpain large subunit, middle domain (domain III)
6 6 2 1 SCOP 51569 Aldolase
6 6 2 2 SCOP 47240 Ferritin-like
6 6 5 1 SCOP 52218 Flavoproteins
6 6 4 2 SCOP 75217 alpha/beta knot
6 5 3 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
6 6 5 0 SCOP 54292 2Fe-2S ferredoxin-like
6 6 1 1 SCOP 56655 Carbohydrate phosphatase
6 6 1 1 SCOP 51430 NAD(P)-linked oxidoreductase
6 6 1 1 SCOP 53590 Nucleoside hydrolase
6 6 5 3 SCOP 54427 NTF2-like
6 6 5 1 SCOP 55856 Cytochrome b5-like heme/steroid binding domain
6 6 6 1 SCOP 56399 ADP-ribosylation
6 6 2 0 SCOP 46458 Globin-like
6 6 3 0 SCOP 102712 JAB1/MPN domain
6 6 6 1 SCOP 55186 ThrRS/AlaRS common domain
6 6 6 1 SCOP 69318 Integrin alpha N-terminal domain
6 3 3 0 SCOP 159034 Mib/herc2 domain-like
6 2 1 1 SCOP 55973 S-adenosylmethionine synthetase
6 6 5 2 SCOP 52440 PreATP-grasp domain
6 6 5 1 SCOP 48334 DNA repair protein MutS, domain III
6 6 4 0 SCOP 52075 Outer arm dynein light chain 1
6 6 4 0 SCOP 57863 ArfGap/RecO-like zinc finger
6 6 2 1 SCOP 56327 LDH C-terminal domain-like
6 5 5 0 SCOP 118310 AN1-like Zinc finger
6 3 3 1 SCOP 53738 Phosphoglucomutase, first 3 domains
6 6 4 3 SCOP 49348 Clathrin adaptor appendage domain
6 6 3 1 SCOP 81271 TGS-like
6 6 6 1 SCOP 54277 CAD & PB1 domains
6 6 6 0 SCOP 49410 Alpha-macroglobulin receptor domain
6 6 5 1 SCOP 109993 VPS9 domain
6 6 6 1 SCOP 48425 Sec7 domain
6 6 3 0 SCOP 82927 Cysteine-rich DNA binding domain, (DM domain)
6 6 3 1 SCOP 48034 Guanido kinase N-terminal domain
6 6 3 0 SCOP 158457 Orange domain-like
5 5 2 1 SCOP 53167 Purine and uridine phosphorylases
5 5 2 1 SCOP 55174 Alpha-L RNA-binding motif
5 5 2 2 SCOP 48557 L-aspartase-like
5 5 5 1 SCOP 54862 4Fe-4S ferredoxins
5 5 5 2 SCOP 52949 Macro domain-like
5 5 1 1 SCOP 56815 Sec1/munc18-like (SM) proteins
5 5 4 2 SCOP 46626 Cytochrome c
5 5 2 1 SCOP 52499 Isochorismatase-like hydrolases
5 5 2 1 SCOP 48439 Protein prenylyltransferase
5 3 3 1 SCOP 55781 GAF domain-like
5 5 2 1 SCOP 52266 SGNH hydrolase
5 4 3 2 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
5 5 2 1 SCOP 53955 Lysozyme-like
5 5 4 0 SCOP 50242 TIMP-like
5 5 1 1 SCOP 110916 Peptidyl-tRNA hydrolase domain-like
5 4 4 0 SCOP 53092 Creatinase/prolidase N-terminal domain
5 1 1 0 SCOP 50199 Staphylococcal nuclease
5 5 3 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
5 5 5 1 SCOP 52743 Subtilisin-like
5 5 4 0 SCOP 56176 FAD-binding/transporter-associated domain-like
5 2 2 1 SCOP 50405 Actin-crosslinking proteins
5 5 3 1 SCOP 52210 Succinyl-CoA synthetase domains
5 5 3 3 SCOP 55060 GHMP Kinase, C-terminal domain
5 4 3 1 SCOP 56042 PurM C-terminal domain-like
5 4 3 1 SCOP 55326 PurM N-terminal domain-like
5 3 3 1 SCOP 55945 TATA-box binding protein-like
5 5 5 1 SCOP 81837 BEACH domain
5 5 3 1 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
5 5 5 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
5 5 3 1 SCOP 46774 ARID-like
5 4 3 1 SCOP 82109 MIR domain
5 5 2 1 SCOP 75632 Cullin homology domain
5 2 2 1 SCOP 109885 I/LWEQ domain
5 4 4 1 SCOP 143791 DUSP-like
5 3 3 0 SCOP 46585 HR1 repeat
5 5 1 1 SCOP 140809 Rhabdovirus nucleoprotein-like
5 5 5 0 SCOP 75553 Smc hinge domain
5 2 2 1 SCOP 47762 PAH2 domain
4 4 2 3 SCOP 53927 Cytidine deaminase-like
4 4 3 1 SCOP 56808 Ribosomal protein L1
4 4 2 1 SCOP 54999 Ribosomal protein S10
4 4 2 1 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
4 4 1 0 SCOP 51161 Trimeric LpxA-like enzymes
4 4 4 2 SCOP 48150 DNA-glycosylase
4 4 1 0 SCOP 89360 HesB-like domain
4 4 1 0 SCOP 144122 Tim10-like
4 4 4 0 SCOP 55144 LigT-like
4 4 2 2 SCOP 52972 ITPase-like
4 4 2 0 SCOP 55257 RBP11-like subunits of RNA polymerase
4 3 3 0 SCOP 55718 SCP-like
4 4 3 1 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
4 4 2 1 SCOP 54518 Tubby C-terminal domain-like
4 4 3 1 SCOP 50486 FMT C-terminal domain-like
4 4 2 1 SCOP 55846 N-acetylmuramoyl-L-alanine amidase-like
4 4 4 3 SCOP 100939 SPOC domain-like
4 4 4 0 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
4 4 1 0 SCOP 102198 Putative cyclase
4 3 3 1 SCOP 55979 DNA clamp
4 3 3 0 SCOP 82185 Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
4 4 3 0 SCOP 52009 Phosphohistidine domain
4 4 4 0 SCOP 81995 beta-sandwich domain of Sec23/24
4 4 2 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
4 3 3 0 SCOP 49742 PHM/PNGase F
4 4 1 1 SCOP 101152 Mob1/phocein
4 4 4 1 SCOP 56366 SMAD MH1 domain
4 3 3 0 SCOP 89837 Doublecortin (DC)
4 4 3 0 SCOP 47353 Retrovirus capsid dimerization domain-like
4 3 3 0 SCOP 117839 WWE domain
4 3 3 0 SCOP 109905 Surp module (SWAP domain)
4 4 4 1 SCOP 82754 C-terminal, gelsolin-like domain of Sec23/24
4 4 4 0 SCOP 101288 L27 domain
4 4 3 0 SCOP 47454 A DNA-binding domain in eukaryotic transcription factors
4 4 2 0 SCOP 57552 Blood coagulation inhibitor (disintegrin)
4 4 4 0 SCOP 140111 Endosomal sorting complex assembly domain
4 4 4 1 SCOP 103243 KA1-like
4 4 2 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
4 2 2 0 SCOP 103637 CCHHC domain
4 4 1 0 SCOP 140996 Hermes dimerisation domain
4 4 2 2 SCOP 55711 Subdomain of clathrin and coatomer appendage domain
4 2 1 0 SCOP 82615 Polo-box domain
4 4 2 0 SCOP 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
4 2 2 0 SCOP 90193 Notch domain
4 4 4 2 SCOP 89009 GAT-like domain
3 3 2 1 SCOP 47973 Ribosomal protein S7
3 3 3 0 SCOP 46911 Ribosomal protein S18
3 3 3 2 SCOP 52141 Uracil-DNA glycosylase-like
3 3 1 1 SCOP 56420 Peptide deformylase
3 3 3 2 SCOP 53697 SIS domain
3 3 2 1 SCOP 51366 Ribulose-phoshate binding barrel
3 3 3 1 SCOP 52166 Ribosomal protein L4
3 3 2 0 SCOP 54843 Ribosomal protein L22
3 3 2 0 SCOP 52080 Ribosomal proteins L15p and L18e
3 3 3 1 SCOP 64182 DHH phosphoesterases
3 3 1 1 SCOP 55831 Thymidylate synthase/dCMP hydroxymethylase
3 3 2 0 SCOP 110324 Ribosomal L27 protein-like
3 3 3 0 SCOP 47336 ACP-like
3 3 1 3 SCOP 51316 Mss4-like
3 3 2 1 SCOP 51713 tRNA-guanine transglycosylase
3 3 3 1 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
3 3 2 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
3 3 1 1 SCOP 82657 BolA-like
3 3 3 1 SCOP 54060 His-Me finger endonucleases
3 1 1 1 SCOP 56634 Heme-dependent catalase-like
3 3 3 0 SCOP 140718 Mediator hinge subcomplex-like
3 3 2 0 SCOP 47027 Acyl-CoA binding protein
3 3 3 0 SCOP 54897 Protease propeptides/inhibitors
3 3 2 0 SCOP 51306 LexA/Signal peptidase
3 3 3 2 SCOP 47819 HRDC-like
3 2 2 1 SCOP 69645 Arp2/3 complex subunits
3 3 1 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
3 3 1 0 SCOP 110849 ParB/Sulfiredoxin
3 3 2 0 SCOP 53032 tRNA-intron endonuclease catalytic domain-like
3 3 1 0 SCOP 58113 Apolipoprotein A-I
3 3 1 1 SCOP 55418 eIF4e-like
3 3 2 0 SCOP 101478 ADP-ribosylglycohydrolase
3 3 3 0 SCOP 52172 CheY-like
3 3 1 1 SCOP 55040 Molybdenum cofactor biosynthesis protein C, MoaC
3 3 2 1 SCOP 51998 PFL-like glycyl radical enzymes
3 3 2 1 SCOP 52016 LeuD/IlvD-like
3 3 2 1 SCOP 110857 Gamma-glutamyl cyclotransferase-like
3 3 2 0 SCOP 55154 CYTH-like phosphatases
3 3 3 0 SCOP 81340 Clc chloride channel
3 2 2 2 SCOP 53218 Molybdenum cofactor biosynthesis proteins
3 3 3 0 SCOP 54736 ClpS-like
3 3 2 1 SCOP 53732 Aconitase iron-sulfur domain
3 2 2 1 SCOP 103365 Hypothetical protein PH1602
3 3 3 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
3 3 3 0 SCOP 48295 TrpR-like
3 3 3 0 SCOP 69322 Tricorn protease domain 2
3 3 1 1 SCOP 103196 Roadblock/LC7 domain
3 3 1 1 SCOP 89124 Nop domain
3 3 3 1 SCOP 102462 Peptidyl-tRNA hydrolase II
3 3 3 0 SCOP 158832 Tex N-terminal region-like
3 3 2 0 SCOP 51246 Rudiment single hybrid motif
3 3 2 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
3 3 2 0 SCOP 55103 FAD-linked oxidases, C-terminal domain
3 3 3 0 SCOP 47090 PGBD-like
3 3 3 1 SCOP 140990 FtsH protease domain-like
3 3 2 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
3 3 3 0 SCOP 49354 PapD-like
3 3 2 0 SCOP 117289 Nucleoporin domain
3 1 1 1 SCOP 103647 TSP type-3 repeat
3 3 3 0 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
3 3 2 0 SCOP 47741 CO dehydrogenase ISP C-domain like
3 3 3 1 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
3 3 3 0 SCOP 82708 R3H domain
3 3 2 1 SCOP 160696 BTG domain-like
3 3 2 0 SCOP 49723 Lipase/lipooxygenase domain (PLAT/LH2 domain)
3 3 2 0 SCOP 56994 Insulin-like
3 3 2 1 SCOP 50353 Cytokine
3 3 3 1 SCOP 56854 Bcl-2 inhibitors of programmed cell death
3 3 2 0 SCOP 48670 Transducin (heterotrimeric G protein), gamma chain
3 3 1 0 SCOP 158573 GINS helical bundle-like
3 3 3 0 SCOP 47676 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
3 3 3 0 SCOP 82671 SEA domain
3 3 2 1 SCOP 110004 Glycolipid transfer protein, GLTP
3 3 2 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
3 3 2 1 SCOP 144074 E2F-DP heterodimerization region
3 2 2 0 SCOP 63451 LEM domain
3 3 3 0 SCOP 56487 SRCR-like
3 3 2 0 SCOP 47686 Anaphylotoxins (complement system)
3 3 3 0 SCOP 110942 HSP90 C-terminal domain
3 2 2 1 SCOP 57933 TAZ domain
3 1 1 0 SCOP 47045 RAP domain-like
3 3 2 0 SCOP 55277 GYF domain
3 3 2 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
3 3 2 1 SCOP 140383 BSD domain-like
3 1 1 0 SCOP 57581 TB module/8-cys domain
3 3 2 0 SCOP 101790 Aminomethyltransferase beta-barrel domain
3 3 3 1 SCOP 81811 Helical domain of Sec23/24
3 3 3 1 SCOP 47587 Domain of poly(ADP-ribose) polymerase
2 2 2 1 SCOP 53790 Tetrapyrrole methylase
2 2 1 1 SCOP 54686 Ribosomal protein L16p/L10e
2 2 1 1 SCOP 55282 RL5-like
2 1 1 0 SCOP 56214 4'-phosphopantetheinyl transferase
2 2 1 2 SCOP 51658 Xylose isomerase-like
2 2 1 1 SCOP 75620 Release factor
2 2 2 1 SCOP 75625 YebC-like
2 2 2 0 SCOP 160369 Ribosomal protein L10-like
2 2 2 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
2 2 1 0 SCOP 52161 Ribosomal protein L13
2 2 2 0 SCOP 51730 FAD-linked oxidoreductase
2 2 1 1 SCOP 55821 YrdC/RibB
2 2 2 1 SCOP 51283 dUTPase-like
2 2 2 1 SCOP 50715 Ribosomal protein L25-like
2 2 2 0 SCOP 55129 Ribosomal protein L30p/L7e
2 2 2 1 SCOP 56796 Dehydroquinate synthase-like
2 2 1 1 SCOP 48256 Citrate synthase
2 2 1 1 SCOP 54762 Signal recognition particle alu RNA binding heterodimer, SRP9/14
2 2 1 1 SCOP 69500 DTD-like
2 2 2 1 SCOP 53328 Formyltransferase
2 2 1 0 SCOP 63393 RNA polymerase subunits
2 2 1 1 SCOP 56019 The spindle assembly checkpoint protein mad2
2 2 1 0 SCOP 53639 AraD/HMP-PK domain-like
2 2 2 0 SCOP 47072 Cysteine alpha-hairpin motif
2 2 1 1 SCOP 82282 Homocysteine S-methyltransferase
2 2 2 1 SCOP 56529 FAH
2 2 2 1 SCOP 55159 eIF1-like
2 2 2 1 SCOP 143113 NAP-like
2 2 1 1 SCOP 55909 Pentein
2 2 1 1 SCOP 52788 Phosphotyrosine protein phosphatases I
2 2 2 1 SCOP 81442 Cytochrome c oxidase subunit I-like
2 2 2 0 SCOP 52091 SpoIIaa-like
2 2 2 1 SCOP 56601 beta-lactamase/transpeptidase-like
2 2 2 1 SCOP 53795 PEP carboxykinase-like
2 1 1 0 SCOP 54909 Dimeric alpha+beta barrel
2 2 2 1 SCOP 56349 DNA breaking-rejoining enzymes
2 2 2 1 SCOP 49503 Cupredoxins
2 2 1 1 SCOP 55166 Hedgehog/DD-peptidase
2 2 1 1 SCOP 54690 Molybdopterin synthase subunit MoaE
2 2 1 1 SCOP 54913 GlnB-like
2 2 2 1 SCOP 50800 PK beta-barrel domain-like
2 2 1 1 SCOP 50993 Peptidase/esterase 'gauge' domain
2 2 2 0 SCOP 54975 Acylphosphatase/BLUF domain-like
2 2 2 0 SCOP 158997 Trm112p-like
2 2 1 1 SCOP 89796 CoA-transferase family III (CaiB/BaiF)
2 1 1 0 SCOP 160909 ATP12-like
2 2 2 0 SCOP 110069 ApaG-like
2 2 2 1 SCOP 52335 Methylglyoxal synthase-like
2 2 2 1 SCOP 55804 Phoshotransferase/anion transport protein
2 2 2 0 SCOP 101262 Methenyltetrahydrofolate cyclohydrolase-like
2 2 2 0 SCOP 55021 ACT-like
2 2 1 0 SCOP 75011 3-carboxy-cis,cis-mucoante lactonizing enzyme
2 2 2 0 SCOP 55136 Probable bacterial effector-binding domain
2 2 2 1 SCOP 47592 SWIB/MDM2 domain
2 2 1 1 SCOP 74784 Translin
2 2 2 1 SCOP 111321 AF1104-like
2 2 2 1 SCOP 54984 eEF-1beta-like
2 2 2 1 SCOP 46548 alpha-helical ferredoxin
2 2 1 0 SCOP 55895 Ribonuclease Rh-like
2 2 2 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
2 2 2 0 SCOP 53706 Formate dehydrogenase/DMSO reductase, domains 1-3
2 2 2 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
2 2 2 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
2 2 2 0 SCOP 141255 YccV-like
2 2 2 1 SCOP 142921 WGR domain-like
2 2 2 1 SCOP 56719 Type II DNA topoisomerase
2 2 1 1 SCOP 52922 TK C-terminal domain-like
2 2 2 0 SCOP 50965 Galactose oxidase, central domain
2 2 2 0 SCOP 118116 DNA mismatch repair protein MutL
2 2 1 0 SCOP 158745 LanC-like
2 2 2 1 SCOP 68923 PEP carboxykinase N-terminal domain
2 2 2 0 SCOP 49842 TNF-like
2 2 2 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
2 2 2 0 SCOP 141673 MOSC N-terminal domain-like
2 2 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
2 2 2 0 SCOP 81585 PsbU/PolX domain-like
2 2 1 0 SCOP 49363 Purple acid phosphatase, N-terminal domain
2 1 1 0 SCOP 54810 GMP synthetase C-terminal dimerisation domain
2 2 1 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
2 2 1 0 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
2 2 2 0 SCOP 110836 Hypothetical protein SAV1430
2 2 1 0 SCOP 47794 Rad51 N-terminal domain-like
2 2 2 0 SCOP 90250 Troponin coil-coiled subunits
2 1 1 1 SCOP 56053 Ribosomal protein L6
2 2 1 0 SCOP 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
2 1 1 1 SCOP 55116 Formiminotransferase domain of formiminotransferase-cyclodeaminase.
2 2 2 1 SCOP 55957 Phosphoglucomutase, C-terminal domain
2 2 2 0 SCOP 54991 Anticodon-binding domain of PheRS
2 2 2 0 SCOP 55271 DNA repair protein MutS, domain I
2 2 2 1 SCOP 50923 Hemopexin-like domain
2 1 1 0 SCOP 57392 Defensin-like
2 2 1 0 SCOP 69761 GTP cyclohydrolase I feedback regulatory protein, GFRP
2 2 1 1 SCOP 48445 14-3-3 protein
2 2 2 0 SCOP 47396 Transcription factor IIA (TFIIA), alpha-helical domain
2 2 1 1 SCOP 47874 Annexin
2 2 1 1 SCOP 47798 Barrier-to-autointegration factor, BAF
2 2 2 0 SCOP 47391 Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
2 2 2 1 SCOP 63570 PABC (PABP) domain
2 2 2 1 SCOP 55455 SRF-like
2 2 2 0 SCOP 49303 beta-Galactosidase/glucuronidase domain
2 2 1 1 SCOP 140984 PTPA-like
2 1 1 1 SCOP 158639 ENT-like
2 2 2 0 SCOP 57440 Kringle-like
2 2 2 1 SCOP 69012 alpha-ketoacid dehydrogenase kinase, N-terminal domain
2 2 1 1 SCOP 143724 PHP14-like
2 2 1 1 SCOP 88798 N-terminal, heterodimerisation domain of RBP7 (RpoE)
2 2 2 0 SCOP 140856 USP8 N-terminal domain-like
2 2 2 0 SCOP 64602 F1 ATPase inhibitor, IF1, C-terminal domain
2 2 2 0 SCOP 47050 VHP, Villin headpiece domain
2 2 2 0 SCOP 54368 Glutamine synthetase, N-terminal domain
2 1 1 0 SCOP 64593 Intermediate filament protein, coiled coil region
2 2 2 1 SCOP 101233 PWI domain
2 2 2 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
2 2 1 1 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
2 2 1 1 SCOP 143885 RGC domain-like
2 2 1 0 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
2 2 2 0 SCOP 160527 V-type ATPase subunit E-like
2 2 2 0 SCOP 50784 Transcription factor IIA (TFIIA), beta-barrel domain
2 2 2 0 SCOP 109715 DEK C-terminal domain
2 2 2 1 SCOP 50989 Clathrin heavy-chain terminal domain
2 2 2 1 SCOP 50916 Rap30/74 interaction domains
2 2 2 0 SCOP 46942 Elongation factor TFIIS domain 2
2 1 1 1 SCOP 81872 BRCA2 helical domain
2 2 2 0 SCOP 143575 GAS2 domain-like
2 2 1 1 SCOP 88802 Pre-PUA domain
2 2 2 0 SCOP 69687 Integrin beta tail domain
2 2 2 0 SCOP 63763 SAND domain-like
2 2 2 0 SCOP 69848 LCCL domain
2 1 1 1 SCOP 100909 IP3 receptor type 1 binding core, domain 2
2 2 1 0 SCOP 140612 EB1 dimerisation domain-like
2 2 2 1 SCOP 63887 P-domain of calnexin/calreticulin
2 2 2 1 SCOP 160897 Taf5 N-terminal domain-like
2 2 2 0 SCOP 109843 CAPPD, an extracellular domain of amyloid beta A4 protein
2 2 1 1 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
2 2 2 0 SCOP 47802 DNA polymerase beta, N-terminal domain-like
2 2 1 1 SCOP 81799 Putative methyltransferase TM0872, insert domain
2 2 2 0 SCOP 109732 HBS1-like domain
2 2 1 0 SCOP 46915 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
2 2 2 0 SCOP 103652 G protein-binding domain
1 1 1 0 SCOP 161098 MetI-like
1 1 1 0 SCOP 54570 Ribosomal protein S19
1 1 1 0 SCOP 50193 Ribosomal protein L14
1 1 1 1 SCOP 56047 Ribosomal protein S8
1 1 1 1 SCOP 103491 Preprotein translocase SecY subunit
1 1 1 0 SCOP 57840 Ribosomal protein L36
1 1 1 0 SCOP 46946 S13-like H2TH domain
1 1 1 0 SCOP 64263 Prokaryotic ribosomal protein L17
1 1 1 0 SCOP 74731 Ribosomal protein L20
1 1 1 0 SCOP 53784 Phosphofructokinase
1 1 1 0 SCOP 141091 L21p-like
1 1 1 1 SCOP 53748 Phosphoglycerate kinase
1 1 1 1 SCOP 82549 DAK1/DegV-like
1 1 1 1 SCOP 50324 Inorganic pyrophosphatase
1 1 1 1 SCOP 55068 Peptide methionine sulfoxide reductase
1 1 1 1 SCOP 51351 Triosephosphate isomerase (TIM)
1 1 1 0 SCOP 53633 Carbamate kinase-like
1 1 1 0 SCOP 55194 Ribosome recycling factor, RRF
1 1 1 0 SCOP 54565 Ribosomal protein S16
1 1 1 1 SCOP 103263 Chorismate synthase, AroC
1 1 1 0 SCOP 56770 HydA/Nqo6-like
1 1 1 1 SCOP 56276 S-adenosylmethionine decarboxylase
1 1 1 0 SCOP 52313 Ribosomal protein S2
1 1 1 0 SCOP 54285 MoaD/ThiS
1 1 1 1 SCOP 102705 NIF3 (NGG1p interacting factor 3)-like
1 1 1 0 SCOP 55205 EPT/RTPC-like
1 1 1 0 SCOP 50685 Barwin-like endoglucanases
1 1 1 1 SCOP 81452 Cytochrome c oxidase subunit III-like
1 1 1 0 SCOP 46561 Ribosomal protein L29 (L29p)
1 1 1 0 SCOP 54995 Ribosomal protein S6
1 1 1 0 SCOP 55387 Frataxin/Nqo15-like
1 1 1 1 SCOP 48140 Ribosomal protein L19 (L19e)
1 1 1 1 SCOP 144217 CSL zinc finger
1 1 1 0 SCOP 52042 Ribosomal protein L32e
1 1 1 0 SCOP 141678 MAL13P1.257-like
1 1 1 0 SCOP 110296 Oligoxyloglucan reducing end-specific cellobiohydrolase
1 1 1 0 SCOP 54575 Ribosomal protein L31e
1 1 1 1 SCOP 102886 Coproporphyrinogen III oxidase
1 1 1 1 SCOP 51726 UROD/MetE-like
1 1 1 1 SCOP 142897 TFB5-like
1 1 1 0 SCOP 103456 Preprotein translocase SecE subunit
1 1 1 0 SCOP 81524 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 1 SCOP 57798 Casein kinase II beta subunit
1 1 1 0 SCOP 111278 SSo0622-like
1 1 1 0 SCOP 81411 Mitochondrial cytochrome c oxidase subunit VIa
1 1 1 0 SCOP 81514 Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 1 SCOP 55248 PCD-like
1 1 1 0 SCOP 54506 Diaminopimelate epimerase-like
1 1 1 0 SCOP 144210 Nop10-like SnoRNP
1 1 1 0 SCOP 89895 FYSH domain
1 1 1 1 SCOP 53774 Glutaminase/Asparaginase
1 1 1 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
1 1 1 1 SCOP 90096 Subunits of heterodimeric actin filament capping protein Capz
1 1 1 1 SCOP 69103 Arp2/3 complex 16 kDa subunit ARPC5
1 1 1 0 SCOP 81508 Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 48662 Ribosomal protein L39e
1 1 1 0 SCOP 140959 Indolic compounds 2,3-dioxygenase-like
1 1 1 1 SCOP 118203 Vacuolar ATP synthase subunit C
1 1 1 0 SCOP 161219 CHY zinc finger-like
1 1 1 0 SCOP 47694 Cytochrome c oxidase subunit h
1 1 1 0 SCOP 81343 Fumarate reductase respiratory complex transmembrane subunits
1 1 1 1 SCOP 69060 Arp2/3 complex 21 kDa subunit ARPC3
1 1 1 0 SCOP 103486 V-type ATP synthase subunit C
1 1 1 0 SCOP 143870 PF0523-like
1 1 1 1 SCOP 64153 YjeF N-terminal domain-like
1 1 1 0 SCOP 103111 Activator of Hsp90 ATPase, Aha1
1 1 1 0 SCOP 55770 Profilin (actin-binding protein)
1 1 1 1 SCOP 46924 RNA polymerase subunit RPB10
1 1 1 0 SCOP 46988 Tubulin chaperone cofactor A
1 1 1 0 SCOP 143447 AMMECR1-like
1 1 1 0 SCOP 48690 Epsilon subunit of mitochondrial F1F0-ATP synthase
1 1 1 1 SCOP 63562 RPB6/omega subunit-like
1 1 1 1 SCOP 53800 Chelatase
1 1 1 1 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
1 1 1 1 SCOP 81342 Transmembrane di-heme cytochromes
1 1 1 1 SCOP 81648 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 1 SCOP 101546 ASF1-like
1 1 1 0 SCOP 161084 MAPEG domain-like
1 1 1 0 SCOP 111038 YjbQ-like
1 1 1 0 SCOP 69118 AhpD-like
1 1 1 0 SCOP 143243 Nqo5-like
1 1 1 0 SCOP 118196 YaeB-like
1 1 1 0 SCOP 48484 Lipoxigenase
1 1 1 0 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
1 1 1 0 SCOP 55331 Tautomerase/MIF
1 1 1 0 SCOP 58100 Bacterial hemolysins
1 1 1 0 SCOP 75712 Rad50 coiled-coil Zn hook
1 1 1 0 SCOP 82771 GIY-YIG endonuclease
1 1 1 0 SCOP 82697 PurS-like
1 1 1 1 SCOP 56524 Oxidoreductase molybdopterin-binding domain
1 1 1 0 SCOP 46767 Methylated DNA-protein cysteine methyltransferase, C-terminal domain
1 1 1 0 SCOP 101744 Rof/RNase P subunit-like
1 1 1 0 SCOP 54447 ssDNA-binding transcriptional regulator domain
1 1 1 0 SCOP 89550 PHP domain-like
1 1 1 1 SCOP 89733 L-sulfolactate dehydrogenase-like
1 1 1 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
1 1 1 0 SCOP 141000 Glu-tRNAGln amidotransferase C subunit
1 1 1 1 SCOP 56762 HydB/Nqo4-like
1 1 1 1 SCOP 117856 AF0104/ALDC/Ptd012-like
1 1 1 1 SCOP 54111 Urease, gamma-subunit
1 1 1 1 SCOP 51278 Urease, beta-subunit
1 1 1 0 SCOP 55200 Translation initiation factor IF3, C-terminal domain
1 1 1 0 SCOP 143081 BB1717-like
1 1 1 0 SCOP 50952 Soluble quinoprotein glucose dehydrogenase
1 1 1 1 SCOP 82544 GckA/TtuD-like
1 1 1 1 SCOP 48173 Cryptochrome/photolyase FAD-binding domain
1 1 1 0 SCOP 89095 GatB/YqeY motif
1 1 1 0 SCOP 109910 YgfY-like
1 1 1 0 SCOP 102588 LmbE-like
1 1 1 1 SCOP 101386 all-alpha NTP pyrophosphatases
1 1 1 0 SCOP 56747 Prim-pol domain
1 1 1 1 SCOP 110581 Indigoidine synthase A-like
1 1 1 0 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
1 1 1 0 SCOP 140931 Fic-like
1 1 1 0 SCOP 57802 Rubredoxin-like
1 1 1 0 SCOP 53182 Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
1 1 1 1 SCOP 52242 Cobalamin (vitamin B12)-binding domain
1 1 1 1 SCOP 51703 Cobalamin (vitamin B12)-dependent enzymes
1 1 1 0 SCOP 101473 DhaL-like
1 1 1 1 SCOP 111326 Urocanase
1 1 1 0 SCOP 159659 Cgl1923-like
1 1 1 0 SCOP 69786 YggU-like
1 1 1 0 SCOP 64076 MTH938-like
1 1 1 0 SCOP 81593 Nucleotidyltransferase substrate binding subunit/domain
1 1 1 1 SCOP 51604 Enolase C-terminal domain-like
1 1 1 1 SCOP 110395 CutC-like
1 1 1 0 SCOP 49452 Starch-binding domain-like
1 1 1 1 SCOP 56726 DNA topoisomerase IV, alpha subunit
1 1 1 0 SCOP 160631 SMI1/KNR4-like
1 1 1 0 SCOP 46950 Double-stranded DNA-binding domain
1 1 1 1 SCOP 50346 PRC-barrel domain
1 1 1 0 SCOP 160350 Rnp2-like
1 1 1 0 SCOP 69819 MTH1598-like
1 1 1 0 SCOP 55287 RPB5-like RNA polymerase subunit
1 1 1 0 SCOP 143437 THUMP domain-like
1 1 1 0 SCOP 116820 Rps17e-like
1 1 1 0 SCOP 160374 RplX-like
1 1 1 0 SCOP 63867 MoeA C-terminal domain-like
1 1 1 0 SCOP 101756 Hypothetical protein YgiW
1 1 1 1 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
1 1 1 0 SCOP 56003 Molybdenum cofactor-binding domain
1 1 1 0 SCOP 46589 tRNA-binding arm
1 1 1 0 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
1 1 1 1 SCOP 69336 Alpha subunit of glutamate synthase, C-terminal domain
1 1 1 0 SCOP 50960 TolB, C-terminal domain
1 1 1 1 SCOP 56512 Nitric oxide (NO) synthase oxygenase domain
1 1 1 1 SCOP 82114 Riboflavin kinase-like
1 1 1 0 SCOP 160443 SMR domain-like
1 1 1 1 SCOP 102645 CoaB-like
1 1 1 0 SCOP 69989 C-terminal domain of PLC-beta
1 1 1 0 SCOP 58026 Delta-sleep-inducing peptide immunoreactive peptide
1 1 1 0 SCOP 54106 LysM domain
1 1 1 0 SCOP 47384 Homodimeric domain of signal transducing histidine kinase
1 1 1 0 SCOP 49468 VHL
1 1 1 1 SCOP 52935 PK C-terminal domain-like
1 1 1 0 SCOP 160481 BRK domain-like
1 1 1 0 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
1 1 1 0 SCOP 55658 L9 N-domain-like
1 1 1 0 SCOP 144206 NOB1 zinc finger-like
1 1 1 1 SCOP 103359 Suppressor of Fused, N-terminal domain
1 1 1 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
1 1 1 0 SCOP 49373 Invasin/intimin cell-adhesion fragments
1 1 1 0 SCOP 56037 PheT/TilS domain
1 1 1 0 SCOP 75704 Mitotic arrest deficient-like 1, Mad1
1 1 1 1 SCOP 63999 Thiamin pyrophosphokinase, catalytic domain
1 1 1 0 SCOP 58022 XRCC4, C-terminal oligomerization domain
1 1 1 0 SCOP 81464 Cytochrome c oxidase subunit II-like, transmembrane region
1 1 1 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
1 1 1 0 SCOP 142984 Nqo1 middle domain-like
1 1 1 0 SCOP 51294 Hedgehog/intein (Hint) domain
1 1 1 1 SCOP 110111 Ctag/Cox11
1 1 1 0 SCOP 74853 Lamin A/C globular tail domain
1 1 1 1 SCOP 110019 ERO1-like
1 1 1 1 SCOP 54826 Enolase N-terminal domain-like
1 1 1 1 SCOP 53623 MurD-like peptide ligases, catalytic domain
1 1 1 0 SCOP 54665 CO dehydrogenase molybdoprotein N-domain-like
1 1 1 1 SCOP 81891 Poly A polymerase C-terminal region-like
1 1 1 1 SCOP 53920 Fe-only hydrogenase
1 1 1 0 SCOP 143548 Serine metabolism enzymes domain
1 1 1 1 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
1 1 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
1 1 1 0 SCOP 110997 Sporulation related repeat
1 1 1 0 SCOP 46604 Epsilon subunit of F1F0-ATP synthase C-terminal domain
1 1 1 1 SCOP 101887 Apyrase
1 1 1 0 SCOP 75689 Zinc-binding domain of translation initiation factor 2 beta
1 1 1 0 SCOP 100966 Translation initiation factor 2 beta, aIF2beta, N-terminal domain
1 1 1 1 SCOP 55637 Cell cycle regulatory proteins
1 1 1 1 SCOP 101278 N-terminal domain of adenylylcyclase associated protein, CAP
1 1 1 0 SCOP 53155 Methylated DNA-protein cysteine methyltransferase domain
1 1 1 0 SCOP 69979 Eea1 homodimerisation domain
1 1 1 0 SCOP 101494 Stathmin
1 1 1 0 SCOP 47933 ERP29 C domain-like
1 1 1 0 SCOP 55545 beta-N-acetylhexosaminidase-like domain
1 1 1 0 SCOP 140490 Nqo1C-terminal domain-like
1 1 1 0 SCOP 48092 Transcription factor STAT-4 N-domain
1 1 1 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
1 1 1 0 SCOP 144284 Sec2 N-terminal region
1 1 1 1 SCOP 56542 Substrate-binding domain of HMG-CoA reductase
1 1 1 0 SCOP 82061 BAH domain
1 1 1 1 SCOP 116742 eIF2alpha middle domain-like
1 1 1 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
1 1 1 0 SCOP 46596 Eukaryotic DNA topoisomerase I, dispensable insert domain
1 1 1 0 SCOP 111357 Mitochondrial ATP synthase coupling factor 6
1 1 1 0 SCOP 81790 Myosin phosphatase inhibitor 17kDa protein, CPI-17
1 1 1 1 SCOP 89817 Mago nashi protein
1 1 1 0 SCOP 57492 Trefoil
1 1 1 0 SCOP 69000 FAD-dependent thiol oxidase
1 1 1 0 SCOP 81415 Mitochondrial cytochrome c oxidase subunit VIc
1 1 1 0 SCOP 118359 Expressed protein At2g23090/F21P24.15
1 1 1 0 SCOP 55394 Bactericidal permeability-increasing protein, BPI
1 1 1 0 SCOP 81431 Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)
1 1 1 0 SCOP 47938 Functional domain of the splicing factor Prp18
1 1 1 1 SCOP 50723 Core binding factor beta, CBF
1 1 1 0 SCOP 81419 Mitochondrial cytochrome c oxidase subunit VIIa
1 1 1 1 SCOP 75001 Dipeptidyl peptidase I (cathepsin C), exclusion domain
1 1 1 1 SCOP 55481 N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
1 1 1 0 SCOP 46984 Smac/diablo
1 1 1 0 SCOP 111006 Dystroglycan, domain 2
1 1 1 0 SCOP 161065 ATP synthase D chain-like
1 1 1 1 SCOP 47668 N-terminal domain of cbl (N-cbl)
1 1 1 0 SCOP 81730 beta-catenin-interacting protein ICAT
1 1 1 1 SCOP 140102 ISY1 domain-like
1 1 1 0 SCOP 81531 Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 116907 Hook domain
1 1 1 0 SCOP 48340 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
1 1 1 0 SCOP 140106 Calcyclin-binding protein-like
1 1 1 1 SCOP 140864 TROVE domain-like
1 1 1 1 SCOP 47216 Proteasome activator
1 1 1 1 SCOP 143875 ERH-like
1 1 1 0 SCOP 103107 Hypothetical protein c14orf129, hspc210
1 1 1 1 SCOP 48479 Cytochrome c oxidase subunit E
1 1 1 0 SCOP 90188 Somatomedin B domain
1 1 1 1 SCOP 142019 Nqo1 FMN-binding domain-like
1 1 1 0 SCOP 55261 GAD domain-like
1 1 1 0 SCOP 109925 Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain
1 1 1 0 SCOP 57774 Microbial and mitochondrial ADK, insert "zinc finger" domain
1 1 1 0 SCOP 47565 Insect pheromone/odorant-binding proteins
1 1 1 0 SCOP 81778 Crustacean CHH/MIH/GIH neurohormone
1 1 1 0 SCOP 88645 ssDNA viruses
1 1 1 1 SCOP 54529 Mitochondrial glycoprotein MAM33-like
1 1 1 0 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
1 1 1 0 SCOP 54511 GFP-like
1 1 1 1 SCOP 64158 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
1 1 1 0 SCOP 161060 ATP synthase B chain-like
1 1 1 0 SCOP 144292 occludin/ELL-like
1 1 1 0 SCOP 117018 ATP-dependent DNA ligase DNA-binding domain
1 1 1 1 SCOP 110993 eIF-2-alpha, C-terminal domain
1 1 1 1 SCOP 47040 Kix domain of CBP (creb binding protein)
1 1 1 1 SCOP 89942 eEF1-gamma domain
1 1 1 0 SCOP 47912 Wiscott-Aldrich syndrome protein, WASP, C-terminal domain
1 1 1 1 SCOP 102848 NSFL1 (p97 ATPase) cofactor p47, SEP domain
1 1 1 1 SCOP 82215 C-terminal autoproteolytic domain of nucleoporin nup98
1 1 1 0 SCOP 53036 Eukaryotic RPB5 N-terminal domain
1 1 1 1 SCOP 47157 Mitochondrial import receptor subunit Tom20
1 1 1 1 SCOP 101391 Hsp90 co-chaperone CDC37
1 1 1 0 SCOP 109775 Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain
1 1 1 1 SCOP 90073 GCM domain
1 1 1 0 SCOP 118370 Vasodilator-stimulated phosphoprotein, VASP, tetramerisation domain
1 1 1 0 SCOP 140427 VPS28 C-terminal domain-like
1 1 1 0 SCOP 69099 Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain
1 1 1 0 SCOP 159065 Dom34/Pelota N-terminal domain-like
1 1 1 1 SCOP 110217 DNA-binding protein LAG-1 (CSL)
1 1 1 0 SCOP 143503 PUG domain-like
1 1 1 1 SCOP 69340 C-terminal domain of adenylylcyclase associated protein
1 1 1 0 SCOP 102031 AXH domain
1 1 1 0 SCOP 89811 Amyloid beta a4 protein copper binding domain (domain 2)
1 1 1 1 SCOP 159042 Plus3-like
1 1 1 0 SCOP 47655 STAT
1 1 1 1 SCOP 56741 Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
1 1 1 0 SCOP 50886 D-aminopeptidase, middle and C-terminal domains
1 1 1 1 SCOP 158553 TAFH domain-like
1 1 1 1 SCOP 68993 FAT domain of focal adhesion kinase
1 1 1 1 SCOP 81327 Small-conductance potassium channel
1 1 1 1 SCOP 55003 PAP/Archaeal CCA-adding enzyme, C-terminal domain
1 1 1 0 SCOP 102860 mRNA decapping enzyme DcpS N-terminal domain
1 1 1 0 SCOP 101420 C-terminal domain of Ku80
1 1 1 0 SCOP 64586 C-terminal domain of ProRS
1 1 1 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
1 1 1 1 SCOP 160651 FLJ32549 C-terminal domain-like
1 1 1 0 SCOP 56491 A heparin-binding domain
1 1 1 0 SCOP 144270 Eferin C-derminal domain-like
1 1 1 0 SCOP 160219 AMPKBI-like
1 1 1 0 SCOP 140586 Dcp2 domain-like
1 1 1 1 SCOP 55035 NAD-binding domain of HMG-CoA reductase
1 1 1 0 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 1 0 SCOP 81496 Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
1 1 1 0 SCOP 81502 ISP transmembrane anchor
1 1 1 0 SCOP 111479 Fzo-like conserved region
1 1 1 1 SCOP 63433 Fumarylacetoacetate hydrolase, FAH, N-terminal domain
1 1 1 0 SCOP 82919 Zn-finger domain of Sec23/24
1 1 1 0 SCOP 53150 DNA repair protein MutS, domain II
1 1 1 1 SCOP 101224 HAND domain of the nucleosome remodeling ATPase ISWI
1 1 1 0 SCOP 161256 RILP dimerisation region
1 1 1 1 SCOP 160088 NRDP1 C-terminal domain-like
1 1 1 0 SCOP 47055 TAF(II)230 TBP-binding fragment
1 1 1 0 SCOP 109728 Hypothetical protein AF0491, middle domain
1 1 1 0 SCOP 109736 FGAM synthase PurL, linker domain
1 1 1 0 SCOP 101238 XPC-binding domain
1 1 1 0 SCOP 57770 Methionyl-tRNA synthetase (MetRS), Zn-domain
1 1 1 0 SCOP 140125 Rabenosyn-5 Rab-binding domain-like
1 1 1 0 SCOP 81878 BRCA2 tower domain
1 1 1 0 SCOP 90234 Zinc finger domain of DNA polymerase-alpha
1 1 1 0 SCOP 109805 Phenylalanine zipper
1 1 1 0 SCOP 101283 GRIP domain
1 1 1 1 SCOP 109880 A middle domain of Talin 1
1 1 1 0 SCOP 111469 Geminin coiled-coil domain
1 1 1 1 SCOP 140482 MAST3 pre-PK domain-like
1 1 1 0 SCOP 140576 HIV integrase-binding domain
1 1 1 0 SCOP 158230 PRP4-like
1 1 1 0 SCOP 158548 FLJ32549 domain-like

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The following superfamilies have one or more weak hits:

SCOP superfamily Head morphogenesis protein gp7
SCOP superfamily DPY module
SCOP superfamily MTH1187/YkoF-like
SCOP superfamily Dodecin-like
SCOP superfamily Sigma2 domain of RNA polymerase sigma factors
SCOP superfamily Sigma3 and sigma4 domains of RNA polymerase sigma factors
SCOP superfamily Positive stranded ssRNA viruses
SCOP superfamily Mechanosensitive channel protein MscS (YggB), transmembrane region
SCOP superfamily MesJ substrate recognition domain-like
SCOP superfamily OsmC-like
SCOP superfamily Mechanosensitive channel protein MscS (YggB), C-terminal domain
SCOP superfamily YbaB-like
SCOP superfamily Tp47 lipoprotein, N-terminal domain
SCOP superfamily N-utilization substance G protein NusG, insert domain
SCOP superfamily Orange carotenoid protein, N-terminal domain
SCOP superfamily Double Clp-N motif
SCOP superfamily RuBisCo LSMT C-terminal, substrate-binding domain
SCOP superfamily F1F0 ATP synthase subunit B, membrane domain
SCOP superfamily Photosystem I reaction center subunit X, PsaK
SCOP superfamily Photosystem I subunits PsaA/PsaB
SCOP superfamily Bacterial photosystem II reaction centre, L and M subunits
SCOP superfamily Mitochondrial cytochrome c oxidase subunit IV
SCOP superfamily Skp1 dimerisation domain-like
SCOP superfamily ABC transporter involved in vitamin B12 uptake, BtuC
SCOP superfamily Gated mechanosensitive channel
SCOP superfamily Chemotaxis phosphatase CheZ
SCOP superfamily Putative transcriptional regulator TM1602, C-terminal domain
SCOP superfamily Variable surface antigen VlsE
SCOP superfamily OMPT-like
SCOP superfamily Ribosome binding protein Y (YfiA homologue)
SCOP superfamily SRP19
SCOP superfamily HemD-like
SCOP superfamily Cell wall binding repeat
SCOP superfamily Nucleoplasmin-like core domain
SCOP superfamily Anti-sigma factor AsiA
SCOP superfamily RecG, N-terminal domain
SCOP superfamily Rho N-terminal domain-like
SCOP superfamily Phase 1 flagellin
SCOP superfamily SirA-like
SCOP superfamily Chorismate lyase-like
SCOP superfamily SurE-like
SCOP superfamily MoeA N-terminal region -like
SCOP superfamily Thiamin pyrophosphokinase, substrate-binding domain
SCOP superfamily Ribonuclease domain of colicin E3
SCOP superfamily Telomeric repeat binding factor (TRF) dimerisation domain
SCOP superfamily BAG domain
SCOP superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain
SCOP superfamily Clostridium neurotoxins, "coiled-coil" domain
SCOP superfamily Variant surface glycoprotein (N-terminal domain)
SCOP superfamily Virus ectodomain
SCOP superfamily Influenza hemagglutinin (stalk)
SCOP superfamily N-terminal coiled coil domain from apc
SCOP superfamily Outer membrane lipoprotein
SCOP superfamily Multimerization domain of the phosphoprotein from sendai virus
SCOP superfamily Coiled-coil dimerization domain from cortexillin I
SCOP superfamily Fibrinogen coiled-coil and central regions
SCOP superfamily Assembly domain of cartilage oligomeric matrix protein
SCOP superfamily Zinc domain conserved in yeast copper-regulated transcription factors
SCOP superfamily Metallothionein
SCOP superfamily Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
SCOP superfamily Ferredoxin thioredoxin reductase (FTR), catalytic beta chain
SCOP superfamily HIPIP (high potential iron protein)
SCOP superfamily TNF receptor-like
SCOP superfamily Crisp domain-like
SCOP superfamily Neurotoxin III (ATX III)
SCOP superfamily Midkine
SCOP superfamily Leech antihemostatic proteins
SCOP superfamily Elafin-like
SCOP superfamily Bowman-Birk inhibitor, BBI
SCOP superfamily Colipase-like
SCOP superfamily Cellulose-binding domain
SCOP superfamily Plant lectins/antimicrobial peptides
SCOP superfamily Outer membrane efflux proteins (OEP)
SCOP superfamily Porins
SCOP superfamily Reovirus inner layer core protein p3
SCOP superfamily Prismane protein-like
SCOP superfamily Replication terminator protein (Tus)
SCOP superfamily Non-globular alpha+beta subunits of globular proteins
SCOP superfamily Baseplate structural protein gp11
SCOP superfamily gp120 core
SCOP superfamily ADC synthase
SCOP superfamily DmpA/ArgJ-like
SCOP superfamily Methenyltetrahydromethanopterin cyclohydrolase
SCOP superfamily Sporulation response regulatory protein Spo0B
SCOP superfamily YbaK/ProRS associated domain
SCOP superfamily Glucose permease domain IIB
SCOP superfamily RuBisCO, small subunit
SCOP superfamily Killer toxin KP6 alpha-subunit
SCOP superfamily Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain
SCOP superfamily Alpha-lytic protease prodomain
SCOP superfamily Cdc48 domain 2-like
SCOP superfamily Interleukin 8-like chemokines
SCOP superfamily Prion-like
SCOP superfamily FucI/AraA N-terminal and middle domains
SCOP superfamily Cryptochrome/photolyase, N-terminal domain
SCOP superfamily Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
SCOP superfamily MurCD N-terminal domain
SCOP superfamily Dihydropteroate synthetase-like
SCOP superfamily Bacterial luciferase-like
SCOP superfamily RuBisCo, C-terminal domain
SCOP superfamily E2 regulatory, transactivation domain
SCOP superfamily Cyanovirin-N
SCOP superfamily An insect antifreeze protein
SCOP superfamily Insect cysteine-rich antifreeze protein
SCOP superfamily Bacteriochlorophyll A protein
SCOP superfamily Thermostable phytase (3-phytase)
SCOP superfamily Sialidases
SCOP superfamily FucI/AraA C-terminal domain-like
SCOP superfamily MOP-like
SCOP superfamily Electron transport accessory proteins
SCOP superfamily Osmotin, thaumatin-like protein
SCOP superfamily Rab geranylgeranyltransferase alpha-subunit, insert domain
SCOP superfamily Periplasmic chaperone C-domain
SCOP superfamily Aromatic compound dioxygenase
SCOP superfamily Cna protein B-type domain
SCOP superfamily Transthyretin (synonym: prealbumin)
SCOP superfamily Superoxide reductase-like
SCOP superfamily CBD9-like
SCOP superfamily Multiheme cytochromes
SCOP superfamily Moesin tail domain
SCOP superfamily Fungal elicitin
SCOP superfamily Heme oxygenase-like
SCOP superfamily Peridinin-chlorophyll protein
SCOP superfamily Retrovirus capsid protein, N-terminal core domain
SCOP superfamily Retroviral matrix proteins
SCOP superfamily Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
SCOP superfamily C-terminal domain of RNA polymerase alpha subunit
SCOP superfamily Chemotaxis receptor methyltransferase CheR, N-terminal domain
SCOP superfamily p53 tetramerization domain
SCOP superfamily Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
SCOP superfamily Cloroperoxidase
SCOP superfamily 4-helical cytokines
SCOP superfamily Histidine-containing phosphotransfer domain, HPT domain
SCOP superfamily Apolipoprotein
SCOP superfamily Ribosomal protein S20
SCOP superfamily N-terminal Zn binding domain of HIV integrase
SCOP superfamily C-terminal effector domain of the bipartite response regulators
SCOP superfamily PspA lactotransferrin-binding region
SCOP superfamily Zinc hairpin stack
SCOP superfamily E6 C-terminal domain-like
SCOP superfamily YfgJ-like
SCOP superfamily Viral glycoprotein ectodomain-like
SCOP superfamily YacF-like
SCOP superfamily PSTPO5379-like
SCOP superfamily Jann2411-like
SCOP superfamily NE1680-like
SCOP superfamily MbtH-like
SCOP superfamily SpoVG-like
SCOP superfamily BLRF2-like
SCOP superfamily EspE N-terminal domain-like
SCOP superfamily PriA/YqbF domain
SCOP superfamily MM3350-like
SCOP superfamily PA1994-like
SCOP superfamily SO1590-like
SCOP superfamily YkvR-like
SCOP superfamily Smr-associated domain-like
SCOP superfamily PMT central region-like
SCOP superfamily MgtE N-terminal domain-like
SCOP superfamily SMc04008-like
SCOP superfamily MG296-like
SCOP superfamily PSPTO4464-like
SCOP superfamily YheA/YmcA-like
SCOP superfamily Jann4075-like
SCOP superfamily Ta0600-like
SCOP superfamily Vanabin-like
SCOP superfamily Magnesium transport protein CorA, transmembrane region
SCOP superfamily FdhE-like
SCOP superfamily YwmB-like
SCOP superfamily L28p-like
SCOP superfamily YeeU-like
SCOP superfamily YojJ-like
SCOP superfamily FwdE-like
SCOP superfamily L35p-like
SCOP superfamily Kinetochore globular domain
SCOP superfamily NadA-like
SCOP superfamily AF0625-like
SCOP superfamily CofD-like
SCOP superfamily MFPT repeat-like
SCOP superfamily 'SARS ORF9b-like
SCOP superfamily NfeD domain-like
SCOP superfamily Duffy binding domain-like
SCOP superfamily PriB N-terminal domain-like
SCOP superfamily Pseudo ankyrin repeat-like
SCOP superfamily SipA N-terminal domain-like
SCOP superfamily Type III secretion system domain
SCOP superfamily BAS1536-like
SCOP superfamily PA2201 N-terminal domain-like
SCOP superfamily LemA-like
SCOP superfamily EsxAB dimer-like
SCOP superfamily MW0975(SA0943)-like
SCOP superfamily Synuclein
SCOP superfamily CRISPR-associated protein
SCOP superfamily TM1631-like
SCOP superfamily Accessory protein X4 (ORF8, ORF7a)
SCOP superfamily Hypothetical protein MPN330
SCOP superfamily Avirulence protein AvrPto
SCOP superfamily Resistin
SCOP superfamily OmpH-like
SCOP superfamily Recombination protein RecR
SCOP superfamily Hypothetical protein MTH677
SCOP superfamily ThiG-like
SCOP superfamily GDNF receptor-like
SCOP superfamily Her-1
SCOP superfamily DinB/YfiT-like putative metalloenzymes
SCOP superfamily KRAB domain (Kruppel-associated box)
SCOP superfamily DnaK suppressor protein DksA, alpha-hairpin domain
SCOP superfamily Autotransporter
SCOP superfamily Chlorophyll a-b binding protein
SCOP superfamily Respiratory nitrate reductase 1 gamma chain
SCOP superfamily Trigger factor ribosome-binding domain
SCOP superfamily Bacterial fluorinating enzyme, N-terminal domain
SCOP superfamily MCP/YpsA-like
SCOP superfamily DNA polymerase III psi subunit
SCOP superfamily Putative isomerase YbhE
SCOP superfamily Dextranase, N-terminal domain
SCOP superfamily P40 nucleoprotein
SCOP superfamily Superantigen MAM
SCOP superfamily YcfC-like
SCOP superfamily Invasion protein A (SipA) , C-terminal actin binding domain
SCOP superfamily Typo IV secretion system protein TraC
SCOP superfamily Chemosensory protein Csp2

Jump to [ Top of page · Assignment statistics ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.