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  Home > Genomes > Superfamily assignments for Paramecium tetraurelia


Paramecium tetraurelia superfamily assignments

Taxonomy
Taxonomy browser entry

Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium; Paramecium tetraurelia

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Fasta format sequences
Domain assignments

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Assignment statistics

Sequences: 39525 total
18956 (48 %) with assignment
455 average length
31 % amino acid coverage
Domains: 28398 total
744 unique superfamilies
430 unique families
298 average length
38.2 average superfamily size
97 % formed by duplication
Domain combinations: 699 domain pairs
2725 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies
2760 2736 112 2 SCOP 56112 Protein kinase-like (PK-like)
1642 1355 180 11 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
1622 428 131 0 SCOP 57184 Growth factor receptor domain
1017 864 142 1 SCOP 50978 WD40 repeat-like
967 511 38 0 SCOP 82185 Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
882 768 91 1 SCOP 47473 EF-hand
880 746 84 1 SCOP 57850 RING/U-box
846 589 30 0 SCOP 51206 cAMP-binding domain-like
734 485 89 1 SCOP 48452 TPR-like
576 392 17 0 SCOP 46689 Homeodomain-like
537 487 60 9 SCOP 48371 ARM repeat
537 401 25 0 SCOP 81324 Voltage-gated potassium channels
352 349 42 6 SCOP 54001 Cysteine proteinases
325 235 39 1 SCOP 54928 RNA-binding domain, RBD
290 267 37 1 SCOP 48403 Ankyrin repeat
272 272 21 4 SCOP 56784 HAD-like
261 180 22 2 SCOP 52833 Thioredoxin-like
241 241 7 4 SCOP 53474 alpha/beta-Hydrolases
240 238 27 2 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
222 219 18 0 SCOP 52172 CheY-like
215 213 7 0 SCOP 103473 MFS general substrate transporter
204 155 10 1 SCOP 47954 Cyclin-like
203 153 44 2 SCOP 54236 Ubiquitin-like
195 167 33 0 SCOP 52047 RNI-like
194 108 19 1 SCOP 47923 Ypt/Rab-GAP domain of gyp1p
189 180 22 0 SCOP 46785 "Winged helix" DNA-binding domain
187 177 50 2 SCOP 50729 PH domain-like
182 158 27 0 SCOP 64268 PX domain
178 175 17 3 SCOP 52799 (Phosphotyrosine protein) phosphatases II
178 157 24 0 SCOP 57903 FYVE/PHD zinc finger
174 174 11 0 SCOP 47384 Homodimeric domain of signal transducing histidine kinase
158 111 27 0 SCOP 49562 C2 domain (Calcium/lipid-binding domain, CaLB)
157 157 31 7 SCOP 51735 NAD(P)-binding Rossmann-fold domains
153 127 33 4 SCOP 50249 Nucleic acid-binding proteins
144 144 12 3 SCOP 56059 Glutathione synthetase ATP-binding domain-like
144 142 32 1 SCOP 53300 vWA-like
142 76 13 4 SCOP 53067 Actin-like ATPase domain
140 118 30 0 SCOP 117281 Kelch motif
131 129 11 8 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
131 102 21 0 SCOP 49879 SMAD/FHA domain
129 123 20 0 SCOP 52058 L domain-like
128 128 14 1 SCOP 81653 Calcium ATPase, transduction domain A
122 122 5 1 SCOP 81606 PP2C-like
118 118 16 1 SCOP 81665 Calcium ATPase, transmembrane domain M
115 73 29 0 SCOP 81296 E set domains
111 67 8 0 SCOP 90229 CCCH zinc finger
110 110 11 2 SCOP 56300 Metallo-dependent phosphatases
109 64 10 0 SCOP 90123 ABC transporter transmembrane region
103 62 18 1 SCOP 55073 Nucleotide cyclase
102 101 6 1 SCOP 103506 Mitochondrial carrier
95 95 7 1 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
93 33 12 1 SCOP 63411 LuxS/MPP-like metallohydrolase
89 89 20 1 SCOP 46565 Chaperone J-domain
88 70 51 0 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
82 82 13 2 SCOP 54495 UBC-like
82 45 7 1 SCOP 46458 Globin-like
79 66 13 1 SCOP 50985 RCC1/BLIP-II
79 79 54 0 SCOP 141571 Pentapeptide repeat-like
78 61 25 1 SCOP 48439 Protein prenylyltransferase
74 72 29 5 SCOP 54211 Ribosomal protein S5 domain 2-like
72 62 19 0 SCOP 51126 Pectin lyase-like
69 68 25 2 SCOP 50447 Translation proteins
68 68 7 2 SCOP 53187 Zn-dependent exopeptidases
67 47 15 1 SCOP 82109 MIR domain
66 56 17 4 SCOP 51905 FAD/NAD(P)-binding domain
66 66 19 0 SCOP 57845 B-box zinc-binding domain
62 62 6 1 SCOP 47113 Histone-fold
61 58 17 4 SCOP 53098 Ribonuclease H-like
61 61 3 0 SCOP 57959 Leucine zipper domain
60 49 16 0 SCOP 57997 Tropomyosin
60 60 14 0 SCOP 49899 Concanavalin A-like lectins/glucanases
59 45 11 0 SCOP 57667 beta-beta-alpha zinc fingers
58 57 6 1 SCOP 50630 Acid proteases
56 56 12 0 SCOP 143791 DUSP-like
55 55 8 3 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
55 47 16 0 SCOP 82199 SET domain
54 52 5 6 SCOP 53383 PLP-dependent transferases
54 54 2 0 SCOP 55785 PYP-like sensor domain (PAS domain)
54 50 7 0 SCOP 141086 Agglutinin HPA-like
53 52 10 0 SCOP 58038 SNARE fusion complex
52 43 8 0 SCOP 49452 Starch-binding domain-like
52 46 9 1 SCOP 47616 GST C-terminal domain-like
51 47 8 0 SCOP 55856 Cytochrome b5-like heme/steroid binding domain
51 51 9 0 SCOP 55961 Bet v1-like
51 50 6 0 SCOP 49695 gamma-Crystallin-like
51 48 12 0 SCOP 54160 Chromo domain-like
51 51 8 1 SCOP 52087 CRAL/TRIO domain
50 36 9 2 SCOP 47203 Acyl-CoA dehydrogenase C-terminal domain-like
49 49 5 2 SCOP 109604 HD-domain/PDEase-like
48 48 9 1 SCOP 50104 Translation proteins SH3-like domain
47 47 4 2 SCOP 53254 Phosphoglycerate mutase-like
47 47 8 1 SCOP 64356 SNARE-like
47 47 16 4 SCOP 51445 (Trans)glycosidases
47 33 17 1 SCOP 81901 HCP-like
45 45 10 0 SCOP 144000 Oxysterol-binding protein-like
45 27 7 0 SCOP 100909 IP3 receptor type 1 binding core, domain 2
44 38 8 0 SCOP 47095 HMG-box
44 39 12 1 SCOP 47576 Calponin-homology domain, CH-domain
43 28 4 0 SCOP 55781 GAF domain-like
42 42 7 1 SCOP 52490 Tubulin nucleotide-binding domain-like
42 38 10 0 SCOP 57756 Retrovirus zinc finger-like domains
41 37 8 2 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
41 41 12 1 SCOP 81301 Nucleotidyltransferase
39 39 6 0 SCOP 57829 Zn-binding ribosomal proteins
39 39 19 2 SCOP 55681 Class II aaRS and biotin synthetases
39 35 7 1 SCOP 52949 Macro domain-like
39 22 11 1 SCOP 54980 EF-G C-terminal domain-like
39 39 6 2 SCOP 52029 GroEL apical domain-like
39 33 18 0 SCOP 46934 UBA-like
38 38 7 1 SCOP 56104 SAICAR synthase-like
38 38 6 1 SCOP 51197 Clavaminate synthase-like
38 38 5 1 SCOP 55307 Tubulin C-terminal domain-like
38 38 8 0 SCOP 49354 PapD-like
37 25 8 5 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
37 37 4 1 SCOP 50182 Sm-like ribonucleoproteins
36 34 16 1 SCOP 52374 Nucleotidylyl transferase
36 36 6 0 SCOP 103657 BAR/IMD domain-like
36 23 8 0 SCOP 52821 Rhodanese/Cell cycle control phosphatase
36 35 6 1 SCOP 56204 Hect, E3 ligase catalytic domain
35 35 8 0 SCOP 49764 HSP20-like chaperones
35 35 13 1 SCOP 56399 ADP-ribosylation
35 35 6 2 SCOP 48592 GroEL equatorial domain-like
34 34 7 1 SCOP 55315 L30e-like
34 23 9 2 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
34 34 7 1 SCOP 81631 PAP/OAS1 substrate-binding domain
33 33 9 1 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
33 31 3 1 SCOP 54648 DLC
33 33 8 0 SCOP 144232 HIT/MYND zinc finger-like
33 28 11 0 SCOP 49599 TRAF domain-like
32 32 7 2 SCOP 56645 Acyl-CoA dehydrogenase NM domain-like
32 32 6 0 SCOP 46938 CRAL/TRIO N-terminal domain
32 32 3 0 SCOP 54849 GroEL-intermediate domain like
31 31 5 1 SCOP 55811 Nudix
31 30 13 0 SCOP 50965 Galactose oxidase, central domain
31 22 13 0 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
31 31 13 0 SCOP 47769 SAM/Pointed domain
31 16 6 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
30 28 3 2 SCOP 52096 ClpP/crotonase
30 30 12 1 SCOP 47370 Bromodomain
29 23 10 0 SCOP 52113 BRCT domain
29 29 3 0 SCOP 117892 Band 7/SPFH domain
28 28 8 1 SCOP 50891 Cyclophilin-like
28 28 5 0 SCOP 47661 t-snare proteins
27 27 5 1 SCOP 53448 Nucleotide-diphospho-sugar transferases
27 25 10 1 SCOP 56281 Metallo-hydrolase/oxidoreductase
27 27 10 0 SCOP 54695 POZ domain
26 26 4 0 SCOP 50129 GroES-like
26 26 4 0 SCOP 144091 Rhomboid-like
26 26 3 1 SCOP 56601 beta-lactamase/transpeptidase-like
26 18 6 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
26 13 4 0 SCOP 82615 Polo-box domain
25 24 3 1 SCOP 54518 Tubby C-terminal domain-like
25 17 7 0 SCOP 56024 Phospholipase D/nuclease
25 25 17 0 SCOP 81995 beta-sandwich domain of Sec23/24
24 21 3 0 SCOP 54403 Cystatin/monellin
24 22 7 0 SCOP 52075 Outer arm dynein light chain 1
24 22 7 0 SCOP 90209 Ran binding protein zinc finger-like
24 24 5 0 SCOP 49348 Clathrin adaptor appendage domain
24 24 4 1 SCOP 109993 VPS9 domain
23 23 3 0 SCOP 81338 Aquaporin-like
23 23 4 0 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
23 21 7 2 SCOP 52402 Adenine nucleotide alpha hydrolases-like
23 17 9 0 SCOP 69065 RNase III domain-like
23 23 5 2 SCOP 56219 DNase I-like
22 22 2 0 SCOP 144122 Tim10-like
22 14 4 0 SCOP 54631 CBS-domain pair
22 22 3 1 SCOP 48264 Cytochrome P450
22 18 5 0 SCOP 55797 PR-1-like
22 22 8 0 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
22 22 8 1 SCOP 81837 BEACH domain
21 21 10 2 SCOP 49785 Galactose-binding domain-like
21 21 9 0 SCOP 52954 Class II aaRS ABD-related
21 21 11 0 SCOP 69322 Tricorn protease domain 2
21 21 3 0 SCOP 82704 AlbA-like
21 21 6 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
20 16 5 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
20 20 2 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
20 20 1 1 SCOP 111352 Ammonium transporter
20 11 5 1 SCOP 53901 Thiolase-like
20 18 12 0 SCOP 82171 DPP6 N-terminal domain-like
19 19 1 1 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
19 19 7 1 SCOP 55920 Creatinase/aminopeptidase
19 19 7 1 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
19 19 2 1 SCOP 56801 Acetyl-CoA synthetase-like
19 19 5 2 SCOP 52768 Arginase/deacetylase
19 6 4 0 SCOP 50199 Staphylococcal nuclease
19 16 5 0 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
19 19 5 1 SCOP 101447 Formin homology 2 domain (FH2 domain)
19 19 2 0 SCOP 89009 GAT-like domain
18 16 5 2 SCOP 53271 PRTase-like
18 14 4 3 SCOP 100950 NagB/RpiA/CoA transferase-like
18 9 1 0 SCOP 81333 F1F0 ATP synthase subunit C
18 18 3 0 SCOP 55248 PCD-like
18 17 5 1 SCOP 55931 Glutamine synthetase/guanido kinase
18 18 11 0 SCOP 48065 DBL homology domain (DH-domain)
18 18 6 1 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
18 18 4 0 SCOP 54277 CAD & PB1 domains
18 18 8 0 SCOP 47391 Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
17 17 4 1 SCOP 52317 Class I glutamine amidotransferase-like
17 17 6 1 SCOP 53137 Translational machinery components
17 17 4 1 SCOP 143113 NAP-like
17 17 5 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
17 17 4 1 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
17 17 8 0 SCOP 63748 Tudor/PWWP/MBT
17 17 5 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
16 16 4 0 SCOP 52080 Ribosomal proteins L15p and L18e
16 16 7 3 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
16 11 4 1 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
16 16 4 0 SCOP 81321 Family A G protein-coupled receptor-like
16 16 4 1 SCOP 54534 FKBP-like
16 16 7 4 SCOP 52467 DHS-like NAD/FAD-binding domain
16 16 7 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
16 16 7 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
16 13 7 2 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
16 16 5 0 SCOP 74788 Cullin repeat-like
15 13 5 3 SCOP 51569 Aldolase
15 15 4 1 SCOP 51695 PLC-like phosphodiesterases
15 13 4 1 SCOP 53720 ALDH-like
15 15 3 0 SCOP 110296 Oligoxyloglucan reducing end-specific cellobiohydrolase
15 15 2 0 SCOP 46579 Prefoldin
15 15 4 1 SCOP 74650 Galactose mutarotase-like
15 15 4 0 SCOP 161219 CHY zinc finger-like
15 15 5 0 SCOP 50022 ISP domain
15 15 6 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
15 15 4 0 SCOP 51101 Mannose-binding lectins
15 15 2 0 SCOP 48350 GTPase activation domain, GAP
15 14 3 1 SCOP 48445 14-3-3 protein
15 15 2 0 SCOP 101690 PAZ domain
15 15 7 0 SCOP 110942 HSP90 C-terminal domain
15 15 5 0 SCOP 81822 RuBisCo LSMT C-terminal, substrate-binding domain
14 14 6 3 SCOP 51556 Metallo-dependent hydrolases
14 13 9 0 SCOP 101908 Putative isomerase YbhE
14 14 4 1 SCOP 46626 Cytochrome c
14 10 3 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
14 12 6 1 SCOP 51230 Single hybrid motif
14 14 2 1 SCOP 103196 Roadblock/LC7 domain
14 14 7 1 SCOP 48425 Sec7 domain
14 14 2 0 SCOP 144074 E2F-DP heterodimerization region
14 14 3 0 SCOP 48340 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
13 13 6 1 SCOP 55120 Pseudouridine synthase
13 13 7 1 SCOP 54862 4Fe-4S ferredoxins
13 12 3 1 SCOP 51395 FMN-linked oxidoreductases
13 13 5 0 SCOP 63829 Calcium-dependent phosphotriesterase
13 13 6 3 SCOP 56672 DNA/RNA polymerases
13 13 3 1 SCOP 48256 Citrate synthase
13 13 1 1 SCOP 56815 Sec1/munc18-like (SM) proteins
13 12 5 1 SCOP 51069 Carbonic anhydrase
13 13 3 0 SCOP 57783 Zinc beta-ribbon
13 13 4 0 SCOP 51011 Glycosyl hydrolase domain
13 13 3 1 SCOP 140990 FtsH protease domain-like
13 13 3 0 SCOP 101576 Supernatant protein factor (SPF), C-terminal domain
13 13 5 1 SCOP 48464 ENTH/VHS domain
13 13 4 1 SCOP 75632 Cullin homology domain
13 13 9 0 SCOP 82919 Zn-finger domain of Sec23/24
12 12 3 0 SCOP 54843 Ribosomal protein L22
12 12 3 0 SCOP 55174 Alpha-L RNA-binding motif
12 12 1 2 SCOP 51316 Mss4-like
12 12 2 0 SCOP 51161 Trimeric LpxA-like enzymes
12 12 2 1 SCOP 57798 Casein kinase II beta subunit
12 11 9 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
12 12 8 1 SCOP 55186 ThrRS/AlaRS common domain
12 12 5 0 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
12 12 5 0 SCOP 142921 WGR domain-like
12 4 1 1 SCOP 55973 S-adenosylmethionine synthetase
12 11 3 1 SCOP 52210 Succinyl-CoA synthetase domains
12 12 3 1 SCOP 63380 Riboflavin synthase domain-like
12 12 6 0 SCOP 117289 Nucleoporin domain
12 9 6 0 SCOP 118310 AN1-like Zinc finger
12 12 1 0 SCOP 55277 GYF domain
12 12 5 1 SCOP 47587 Domain of poly(ADP-ribose) polymerase
11 11 4 0 SCOP 111331 NAD kinase/diacylglycerol kinase-like
11 11 3 0 SCOP 47336 ACP-like
11 11 1 1 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
11 11 3 0 SCOP 47060 S15/NS1 RNA-binding domain
11 11 5 0 SCOP 54292 2Fe-2S ferredoxin-like
11 11 3 3 SCOP 51182 RmlC-like cupins
11 11 1 0 SCOP 55418 eIF4e-like
11 11 5 0 SCOP 88697 PUA domain-like
11 11 4 2 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
11 10 5 0 SCOP 90257 Myosin rod fragments
11 11 4 3 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
11 11 1 0 SCOP 57863 ArfGap/RecO-like zinc finger
11 11 1 1 SCOP 55637 Cell cycle regulatory proteins
11 10 7 0 SCOP 57889 Cysteine-rich domain
11 11 6 0 SCOP 46942 Elongation factor TFIIS domain 2
10 10 4 2 SCOP 54197 HIT-like
10 10 1 1 SCOP 56047 Ribosomal protein S8
10 10 3 0 SCOP 52161 Ribosomal protein L13
10 10 2 1 SCOP 56655 Carbohydrate phosphatase
10 10 2 0 SCOP 46561 Ribosomal protein L29 (L29p)
10 10 2 0 SCOP 54575 Ribosomal protein L31e
10 10 5 1 SCOP 88723 PIN domain-like
10 10 2 1 SCOP 53590 Nucleoside hydrolase
10 9 5 1 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
10 10 2 1 SCOP 101546 ASF1-like
10 10 2 0 SCOP 54106 LysM domain
10 10 3 1 SCOP 52922 TK C-terminal domain-like
10 10 6 0 SCOP 48334 DNA repair protein MutS, domain III
10 10 4 0 SCOP 81383 F-box domain
10 5 1 0 SCOP 56053 Ribosomal protein L6
10 6 4 1 SCOP 158702 Sec63 N-terminal domain-like
10 3 2 1 SCOP 53738 Phosphoglucomutase, first 3 domains
10 10 5 0 SCOP 57196 EGF/Laminin
9 9 1 1 SCOP 103491 Preprotein translocase SecY subunit
9 7 4 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
9 9 3 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
9 9 1 0 SCOP 55129 Ribosomal protein L30p/L7e
9 9 2 1 SCOP 51430 NAD(P)-linked oxidoreductase
9 7 4 1 SCOP 55753 Actin depolymerizing proteins
9 9 3 0 SCOP 53649 Alkaline phosphatase-like
9 9 3 2 SCOP 48208 Six-hairpin glycosidases
9 9 2 0 SCOP 47072 Cysteine alpha-hairpin motif
9 9 1 0 SCOP 55770 Profilin (actin-binding protein)
9 9 2 0 SCOP 55718 SCP-like
9 9 2 0 SCOP 161111 Cation efflux protein transmembrane domain-like
9 9 3 0 SCOP 55021 ACT-like
9 9 1 1 SCOP 56327 LDH C-terminal domain-like
9 9 5 0 SCOP 54768 dsRNA-binding domain-like
9 9 5 1 SCOP 82754 C-terminal, gelsolin-like domain of Sec23/24
9 9 1 1 SCOP 49447 Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
9 9 1 0 SCOP 52025 PA domain
9 9 2 0 SCOP 116907 Hook domain
9 9 1 0 SCOP 54368 Glutamine synthetase, N-terminal domain
9 9 2 0 SCOP 54529 Mitochondrial glycoprotein MAM33-like
9 9 4 0 SCOP 89942 eEF1-gamma domain
9 5 4 0 SCOP 49758 Calpain large subunit, middle domain (domain III)
8 8 2 1 SCOP 53613 Ribokinase-like
8 8 1 1 SCOP 47973 Ribosomal protein S7
8 8 1 0 SCOP 54570 Ribosomal protein S19
8 8 2 1 SCOP 55282 RL5-like
8 8 2 0 SCOP 48140 Ribosomal protein L19 (L19e)
8 8 1 0 SCOP 52042 Ribosomal protein L32e
8 8 2 0 SCOP 48662 Ribosomal protein L39e
8 8 3 1 SCOP 88713 Glycoside hydrolase/deacetylase
8 8 2 0 SCOP 55257 RBP11-like subunits of RNA polymerase
8 8 2 1 SCOP 53795 PEP carboxykinase-like
8 8 1 1 SCOP 89124 Nop domain
8 8 1 0 SCOP 160374 RplX-like
8 8 4 1 SCOP 52777 CoA-dependent acyltransferases
8 4 1 1 SCOP 55979 DNA clamp
8 8 2 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
8 8 4 0 SCOP 48019 post-AAA+ oligomerization domain-like
8 4 1 1 SCOP 55945 TATA-box binding protein-like
8 8 2 1 SCOP 81271 TGS-like
8 8 3 0 SCOP 88688 Families 57/38 glycoside transferase middle domain
8 8 4 0 SCOP 50911 Mannose 6-phosphate receptor domain
8 8 2 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
7 7 3 1 SCOP 53927 Cytidine deaminase-like
7 7 2 1 SCOP 56808 Ribosomal protein L1
7 6 2 1 SCOP 53784 Phosphofructokinase
7 7 6 1 SCOP 75217 alpha/beta knot
7 7 2 0 SCOP 160369 Ribosomal protein L10-like
7 7 1 2 SCOP 48557 L-aspartase-like
7 7 5 2 SCOP 51419 PLP-binding barrel
7 7 2 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
7 7 3 1 SCOP 53056 beta-carbonic anhydrase, cab
7 7 3 0 SCOP 58100 Bacterial hemolysins
7 7 3 0 SCOP 55826 YbaK/ProRS associated domain
7 7 3 0 SCOP 56176 FAD-binding/transporter-associated domain-like
7 7 1 1 SCOP 68923 PEP carboxykinase N-terminal domain
7 7 1 0 SCOP 82061 BAH domain
7 7 5 0 SCOP 63570 PABC (PABP) domain
7 4 3 0 SCOP 117839 WWE domain
7 7 3 0 SCOP 47862 Saposin
7 7 2 0 SCOP 160527 V-type ATPase subunit E-like
7 2 2 0 SCOP 81698 FF domain
7 7 3 0 SCOP 48034 Guanido kinase N-terminal domain
6 4 2 1 SCOP 53790 Tetrapyrrole methylase
6 6 1 1 SCOP 75304 Amidase signature (AS) enzymes
6 6 2 0 SCOP 46946 S13-like H2TH domain
6 6 2 0 SCOP 52218 Flavoproteins
6 6 3 1 SCOP 53748 Phosphoglycerate kinase
6 6 3 2 SCOP 55205 EPT/RTPC-like
6 6 1 0 SCOP 103456 Preprotein translocase SecE subunit
6 6 2 0 SCOP 54427 NTF2-like
6 5 2 2 SCOP 48239 Terpenoid cyclases/Protein prenyltransferases
6 6 3 1 SCOP 53774 Glutaminase/Asparaginase
6 6 1 1 SCOP 111126 Ligand-binding domain in the NO signalling and Golgi transport
6 6 1 0 SCOP 103111 Activator of Hsp90 ATPase, Aha1
6 4 3 0 SCOP 50494 Trypsin-like serine proteases
6 6 4 1 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
6 6 2 0 SCOP 50692 ADC-like
6 6 1 0 SCOP 160909 ATP12-like
6 6 1 0 SCOP 55136 Probable bacterial effector-binding domain
6 3 1 0 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
6 4 3 0 SCOP 50370 Ricin B-like lectins
6 6 2 0 SCOP 48537 Phospholipase C/P1 nuclease
6 6 5 0 SCOP 51971 Nucleotide-binding domain
6 6 2 0 SCOP 55060 GHMP Kinase, C-terminal domain
6 6 2 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
6 6 2 0 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
6 6 5 1 SCOP 54373 FAD-linked reductases, C-terminal domain
6 6 2 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
6 6 3 1 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
6 6 4 0 SCOP 55271 DNA repair protein MutS, domain I
6 6 2 0 SCOP 158573 GINS helical bundle-like
6 6 2 0 SCOP 75001 Dipeptidyl peptidase I (cathepsin C), exclusion domain
6 4 3 0 SCOP 109905 Surp module (SWAP domain)
6 4 3 0 SCOP 51045 WW domain
6 6 2 0 SCOP 75553 Smc hinge domain
6 6 3 0 SCOP 140111 Endosomal sorting complex assembly domain
6 6 2 0 SCOP 103243 KA1-like
6 6 2 0 SCOP 82215 C-terminal autoproteolytic domain of nucleoporin nup98
6 6 4 0 SCOP 143503 PUG domain-like
6 6 2 1 SCOP 54585 Cdc48 domain 2-like
5 5 1 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
5 5 4 1 SCOP 50715 Ribosomal protein L25-like
5 5 1 1 SCOP 52499 Isochorismatase-like hydrolases
5 5 1 0 SCOP 63393 RNA polymerase subunits
5 5 2 1 SCOP 56317 Carbon-nitrogen hydrolase
5 5 1 0 SCOP 50044 SH3-domain
5 5 1 0 SCOP 52091 SpoIIaa-like
5 5 3 0 SCOP 50800 PK beta-barrel domain-like
5 5 2 1 SCOP 53732 Aconitase iron-sulfur domain
5 5 2 0 SCOP 57802 Rubredoxin-like
5 5 3 1 SCOP 51604 Enolase C-terminal domain-like
5 5 2 2 SCOP 100939 SPOC domain-like
5 5 3 2 SCOP 46548 alpha-helical ferredoxin
5 5 3 0 SCOP 50156 PDZ domain-like
5 5 2 0 SCOP 55103 FAD-linked oxidases, C-terminal domain
5 5 5 0 SCOP 101898 NHL repeat
5 5 3 0 SCOP 49344 CBD9-like
5 5 3 0 SCOP 52935 PK C-terminal domain-like
5 5 4 0 SCOP 100966 Translation initiation factor 2 beta, aIF2beta, N-terminal domain
5 5 1 0 SCOP 48366 Ras GEF
5 5 3 0 SCOP 47446 Signal peptide-binding domain
5 5 1 0 SCOP 55455 SRF-like
5 5 1 0 SCOP 81531 Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
5 5 3 0 SCOP 69340 C-terminal domain of adenylylcyclase associated protein
5 5 2 0 SCOP 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
5 5 2 0 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
5 5 3 0 SCOP 81767 Pre-protein crosslinking domain of SecA
5 5 3 0 SCOP 47802 DNA polymerase beta, N-terminal domain-like
4 4 2 0 SCOP 56420 Peptide deformylase
4 4 3 2 SCOP 53697 SIS domain
4 4 1 0 SCOP 54999 Ribosomal protein S10
4 4 1 1 SCOP 52166 Ribosomal protein L4
4 4 1 1 SCOP 54686 Ribosomal protein L16p/L10e
4 4 1 1 SCOP 50193 Ribosomal protein L14
4 4 2 0 SCOP 64182 DHH phosphoesterases
4 4 2 1 SCOP 47240 Ferritin-like
4 4 3 0 SCOP 110324 Ribosomal L27 protein-like
4 4 1 1 SCOP 89623 Ribose/Galactose isomerase RpiB/AlsB
4 4 1 1 SCOP 55068 Peptide methionine sulfoxide reductase
4 4 3 1 SCOP 51713 tRNA-guanine transglycosylase
4 4 1 1 SCOP 52313 Ribosomal protein S2
4 4 3 0 SCOP 102114 Radical SAM enzymes
4 4 2 0 SCOP 47027 Acyl-CoA binding protein
4 4 1 0 SCOP 144210 Nop10-like SnoRNP
4 4 1 2 SCOP 90096 Subunits of heterodimeric actin filament capping protein Capz
4 4 2 1 SCOP 69645 Arp2/3 complex subunits
4 4 2 1 SCOP 56529 FAH
4 4 2 0 SCOP 55159 eIF1-like
4 4 4 1 SCOP 52151 FabD/lysophospholipase-like
4 4 2 0 SCOP 102712 JAB1/MPN domain
4 2 1 0 SCOP 46955 Putative DNA-binding domain
4 4 1 1 SCOP 52016 LeuD/IlvD-like
4 4 2 0 SCOP 54447 ssDNA-binding transcriptional regulator domain
4 4 2 0 SCOP 55154 CYTH-like phosphatases
4 4 1 0 SCOP 54736 ClpS-like
4 4 1 0 SCOP 54975 Acylphosphatase/BLUF domain-like
4 4 2 0 SCOP 51338 Composite domain of metallo-dependent hydrolases
4 4 3 0 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
4 4 1 0 SCOP 50814 Lipocalins
4 4 1 1 SCOP 161070 SNF-like
4 4 1 0 SCOP 69786 YggU-like
4 4 4 0 SCOP 48695 Multiheme cytochromes
4 4 2 1 SCOP 56534 Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
4 4 1 0 SCOP 116820 Rps17e-like
4 4 2 1 SCOP 55895 Ribonuclease Rh-like
4 4 3 0 SCOP 53092 Creatinase/prolidase N-terminal domain
4 4 1 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
4 4 2 1 SCOP 56719 Type II DNA topoisomerase
4 4 1 0 SCOP 142984 Nqo1 middle domain-like
4 4 3 1 SCOP 50621 Alanine racemase C-terminal domain-like
4 4 2 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
4 4 2 0 SCOP 81585 PsbU/PolX domain-like
4 4 1 1 SCOP 110019 ERO1-like
4 4 3 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
4 4 1 0 SCOP 55545 beta-N-acetylhexosaminidase-like domain
4 4 1 0 SCOP 140490 Nqo1C-terminal domain-like
4 4 3 0 SCOP 74924 Cap-Gly domain
4 4 1 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
4 4 2 1 SCOP 101152 Mob1/phocein
4 4 1 1 SCOP 89817 Mago nashi protein
4 4 1 1 SCOP 69000 FAD-dependent thiol oxidase
4 4 1 0 SCOP 110004 Glycolipid transfer protein, GLTP
4 4 2 0 SCOP 161065 ATP synthase D chain-like
4 4 1 1 SCOP 142019 Nqo1 FMN-binding domain-like
4 4 2 0 SCOP 101233 PWI domain
4 4 2 1 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
4 4 2 0 SCOP 117018 ATP-dependent DNA ligase DNA-binding domain
4 4 2 0 SCOP 55666 Ribonuclease PH domain 2-like
4 4 3 0 SCOP 161245 Zinc hairpin stack
4 4 2 0 SCOP 140612 EB1 dimerisation domain-like
4 4 1 0 SCOP 64586 C-terminal domain of ProRS
4 4 3 1 SCOP 81811 Helical domain of Sec23/24
4 4 3 0 SCOP 158230 PRP4-like
3 3 2 0 SCOP 56731 DNA primase core
3 3 2 0 SCOP 143034 L35p-like
3 3 2 1 SCOP 82649 SufE/NifU
3 3 1 1 SCOP 50324 Inorganic pyrophosphatase
3 3 2 0 SCOP 52980 Restriction endonuclease-like
3 3 2 1 SCOP 53850 Periplasmic binding protein-like II
3 3 1 1 SCOP 51351 Triosephosphate isomerase (TIM)
3 3 1 0 SCOP 89360 HesB-like domain
3 3 1 1 SCOP 64005 Undecaprenyl diphosphate synthase
3 3 1 1 SCOP 48576 Terpenoid synthases
3 3 1 0 SCOP 55387 Frataxin/Nqo15-like
3 3 1 1 SCOP 51726 UROD/MetE-like
3 3 1 0 SCOP 51306 LexA/Signal peptidase
3 3 1 1 SCOP 52972 ITPase-like
3 3 1 0 SCOP 103486 V-type ATP synthase subunit C
3 3 2 1 SCOP 64153 YjeF N-terminal domain-like
3 3 1 0 SCOP 46988 Tubulin chaperone cofactor A
3 3 1 1 SCOP 55909 Pentein
3 3 2 1 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
3 3 2 0 SCOP 53955 Lysozyme-like
3 3 3 0 SCOP 50952 Soluble quinoprotein glucose dehydrogenase
3 3 2 0 SCOP 102588 LmbE-like
3 3 1 1 SCOP 89796 CoA-transferase family III (CaiB/BaiF)
3 3 2 1 SCOP 103025 Folate-binding domain
3 3 1 1 SCOP 50486 FMT C-terminal domain-like
3 3 1 0 SCOP 53706 Formate dehydrogenase/DMSO reductase, domains 1-3
3 3 3 0 SCOP 50960 TolB, C-terminal domain
3 3 2 0 SCOP 54654 CI-2 family of serine protease inhibitors
3 3 2 0 SCOP 160443 SMR domain-like
3 3 2 0 SCOP 63825 YWTD domain
3 3 2 0 SCOP 103190 Sensory domain-like
3 3 3 0 SCOP 58104 Methyl-accepting chemotaxis protein (MCP) signaling domain
3 3 3 0 SCOP 49464 Carboxypeptidase regulatory domain-like
3 3 1 0 SCOP 160059 PriA/YqbF domain
3 3 2 1 SCOP 52440 PreATP-grasp domain
3 3 3 0 SCOP 75704 Mitotic arrest deficient-like 1, Mad1
3 3 2 0 SCOP 90002 Hypothetical protein YjiA, C-terminal domain
3 3 1 0 SCOP 110836 Hypothetical protein SAV1430
3 3 2 1 SCOP 55957 Phosphoglucomutase, C-terminal domain
3 3 3 1 SCOP 56542 Substrate-binding domain of HMG-CoA reductase
3 1 1 0 SCOP 49303 beta-Galactosidase/glucuronidase domain
3 3 1 1 SCOP 55481 N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
3 3 2 0 SCOP 88798 N-terminal, heterodimerisation domain of RBP7 (RpoE)
3 3 3 0 SCOP 140864 TROVE domain-like
3 3 3 0 SCOP 103107 Hypothetical protein c14orf129, hspc210
3 3 3 0 SCOP 102848 NSFL1 (p97 ATPase) cofactor p47, SEP domain
3 3 2 0 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
3 3 2 1 SCOP 81382 Skp1 dimerisation domain-like
3 3 2 0 SCOP 47031 Second domain of FERM
3 3 3 0 SCOP 55003 PAP/Archaeal CCA-adding enzyme, C-terminal domain
3 3 1 0 SCOP 101420 C-terminal domain of Ku80
3 3 3 0 SCOP 55035 NAD-binding domain of HMG-CoA reductase
3 3 1 0 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
3 3 1 0 SCOP 54364 Translation initiation factor IF3, N-terminal domain
3 3 2 0 SCOP 53150 DNA repair protein MutS, domain II
3 3 1 0 SCOP 101238 XPC-binding domain
2 2 1 1 SCOP 53178 Peptidyl-tRNA hydrolase-like
2 2 1 0 SCOP 46911 Ribosomal protein S18
2 2 1 0 SCOP 57840 Ribosomal protein L36
2 2 1 0 SCOP 64263 Prokaryotic ribosomal protein L17
2 2 1 0 SCOP 74731 Ribosomal protein L20
2 2 1 0 SCOP 141091 L21p-like
2 2 1 0 SCOP 143800 L28p-like
2 2 2 1 SCOP 75620 Release factor
2 2 1 0 SCOP 109998 Triger factor/SurA peptide-binding domain-like
2 2 1 0 SCOP 51730 FAD-linked oxidoreductase
2 2 1 0 SCOP 54285 MoaD/ThiS
2 2 1 1 SCOP 55298 YjgF-like
2 2 1 0 SCOP 82657 BolA-like
2 2 2 1 SCOP 56796 Dehydroquinate synthase-like
2 2 2 0 SCOP 56988 Anthrax protective antigen
2 2 1 0 SCOP 54762 Signal recognition particle alu RNA binding heterodimer, SRP9/14
2 2 2 0 SCOP 47226 Histidine-containing phosphotransfer domain, HPT domain
2 2 1 1 SCOP 102886 Coproporphyrinogen III oxidase
2 2 1 1 SCOP 56634 Heme-dependent catalase-like
2 2 1 0 SCOP 89895 FYSH domain
2 2 1 0 SCOP 69103 Arp2/3 complex 16 kDa subunit ARPC5
2 2 1 0 SCOP 47819 HRDC-like
2 2 1 1 SCOP 49329 Cu,Zn superoxide dismutase-like
2 2 1 1 SCOP 118203 Vacuolar ATP synthase subunit C
2 2 1 0 SCOP 69060 Arp2/3 complex 21 kDa subunit ARPC3
2 2 2 0 SCOP 53032 tRNA-intron endonuclease catalytic domain-like
2 2 2 0 SCOP 55008 HMA, heavy metal-associated domain
2 2 1 1 SCOP 46924 RNA polymerase subunit RPB10
2 2 2 0 SCOP 103378 2-methylcitrate dehydratase PrpD
2 2 1 1 SCOP 63562 RPB6/omega subunit-like
2 2 1 0 SCOP 69118 AhpD-like
2 2 1 0 SCOP 103642 Sec-C motif
2 2 1 1 SCOP 51998 PFL-like glycyl radical enzymes
2 2 2 0 SCOP 54909 Dimeric alpha+beta barrel
2 2 2 1 SCOP 56349 DNA breaking-rejoining enzymes
2 2 1 0 SCOP 143990 YbiA-like
2 2 2 0 SCOP 48173 Cryptochrome/photolyase FAD-binding domain
2 2 1 0 SCOP 109910 YgfY-like
2 2 1 0 SCOP 53182 Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
2 2 1 1 SCOP 111326 Urocanase
2 2 2 0 SCOP 75011 3-carboxy-cis,cis-mucoante lactonizing enzyme
2 2 1 0 SCOP 64076 MTH938-like
2 2 1 0 SCOP 47592 SWIB/MDM2 domain
2 2 1 0 SCOP 46950 Double-stranded DNA-binding domain
2 2 1 0 SCOP 50346 PRC-barrel domain
2 2 1 0 SCOP 160350 Rnp2-like
2 2 1 0 SCOP 54984 eEF-1beta-like
2 2 1 0 SCOP 55287 RPB5-like RNA polymerase subunit
2 2 1 0 SCOP 143437 THUMP domain-like
2 2 1 1 SCOP 102462 Peptidyl-tRNA hydrolase II
2 2 1 0 SCOP 69695 SRP19
2 2 1 0 SCOP 46589 tRNA-binding arm
2 2 1 0 SCOP 51246 Rudiment single hybrid motif
2 2 2 0 SCOP 69304 Tricorn protease N-terminal domain
2 2 1 0 SCOP 54821 Ribosomal protein S3 C-terminal domain
2 2 2 1 SCOP 52009 Phosphohistidine domain
2 2 1 0 SCOP 144206 NOB1 zinc finger-like
2 2 1 0 SCOP 158745 LanC-like
2 2 1 0 SCOP 49265 Fibronectin type III
2 2 2 1 SCOP 55816 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
2 2 1 0 SCOP 56037 PheT/TilS domain
2 2 1 0 SCOP 51110 alpha-D-mannose-specific plant lectins
2 2 1 0 SCOP 110111 Ctag/Cox11
2 2 1 1 SCOP 54826 Enolase N-terminal domain-like
2 2 2 0 SCOP 53920 Fe-only hydrogenase
2 2 2 0 SCOP 52279 Beta-D-glucan exohydrolase, C-terminal domain
2 2 2 0 SCOP 47144 HSC20 (HSCB), C-terminal oligomerisation domain
2 2 1 0 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
2 2 1 0 SCOP 75689 Zinc-binding domain of translation initiation factor 2 beta
2 2 1 0 SCOP 47794 Rad51 N-terminal domain-like
2 2 1 0 SCOP 48435 Bacterial muramidases
2 2 1 0 SCOP 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
2 2 1 0 SCOP 54782 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
2 2 1 0 SCOP 82708 R3H domain
2 2 1 0 SCOP 116742 eIF2alpha middle domain-like
2 2 2 0 SCOP 46774 ARID-like
2 2 1 0 SCOP 47938 Functional domain of the splicing factor Prp18
2 2 1 0 SCOP 89837 Doublecortin (DC)
2 2 1 0 SCOP 143724 PHP14-like
2 2 1 0 SCOP 109925 Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain
2 2 1 0 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
2 2 1 0 SCOP 110993 eIF-2-alpha, C-terminal domain
2 2 1 0 SCOP 53036 Eukaryotic RPB5 N-terminal domain
2 2 1 1 SCOP 50989 Clathrin heavy-chain terminal domain
2 2 2 0 SCOP 47212 FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
2 2 2 0 SCOP 159065 Dom34/Pelota N-terminal domain-like
2 2 1 0 SCOP 143575 GAS2 domain-like
2 2 2 0 SCOP 159042 Plus3-like
2 2 1 1 SCOP 88802 Pre-PUA domain
2 2 2 1 SCOP 56741 Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
2 2 2 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
2 2 1 0 SCOP 55711 Subdomain of clathrin and coatomer appendage domain
2 2 2 0 SCOP 160219 AMPKBI-like
2 2 1 0 SCOP 101790 Aminomethyltransferase beta-barrel domain
2 2 1 0 SCOP 63433 Fumarylacetoacetate hydrolase, FAH, N-terminal domain
2 2 1 0 SCOP 101821 Aminopeptidase/glucanase lid domain
2 2 1 0 SCOP 109728 Hypothetical protein AF0491, middle domain
1 1 1 1 SCOP 52141 Uracil-DNA glycosylase-like
1 1 1 1 SCOP 51366 Ribulose-phoshate binding barrel
1 1 1 0 SCOP 89919 Ribosome-binding factor A, RbfA
1 1 1 0 SCOP 56214 4'-phosphopantetheinyl transferase
1 1 1 1 SCOP 55831 Thymidylate synthase/dCMP hydroxymethylase
1 1 1 0 SCOP 53597 Dihydrofolate reductase-like
1 1 1 0 SCOP 55194 Ribosome recycling factor, RRF
1 1 1 0 SCOP 54565 Ribosomal protein S16
1 1 1 0 SCOP 55821 YrdC/RibB
1 1 1 1 SCOP 103263 Chorismate synthase, AroC
1 1 1 1 SCOP 51283 dUTPase-like
1 1 1 0 SCOP 48150 DNA-glycosylase
1 1 1 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
1 1 1 0 SCOP 54995 Ribosomal protein S6
1 1 1 0 SCOP 144217 CSL zinc finger
1 1 1 0 SCOP 50475 FMN-binding split barrel
1 1 1 0 SCOP 141678 MAL13P1.257-like
1 1 1 1 SCOP 69500 DTD-like
1 1 1 0 SCOP 103464 Oligosaccharyltransferase subunit ost4p
1 1 1 0 SCOP 140718 Mediator hinge subcomplex-like
1 1 1 0 SCOP 53328 Formyltransferase
1 1 1 0 SCOP 159468 AtpF-like
1 1 1 0 SCOP 55144 LigT-like
1 1 1 0 SCOP 56019 The spindle assembly checkpoint protein mad2
1 1 1 0 SCOP 69618 HemD-like
1 1 1 0 SCOP 143447 AMMECR1-like
1 1 1 1 SCOP 53800 Chelatase
1 1 1 0 SCOP 47413 lambda repressor-like DNA-binding domains
1 1 1 0 SCOP 101744 Rof/RNase P subunit-like
1 1 1 0 SCOP 89550 PHP domain-like
1 1 1 1 SCOP 55166 Hedgehog/DD-peptidase
1 1 1 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
1 1 1 0 SCOP 109854 DinB/YfiT-like putative metalloenzymes
1 1 1 0 SCOP 50956 Thermostable phytase (3-phytase)
1 1 1 0 SCOP 117856 AF0104/ALDC/Ptd012-like
1 1 1 0 SCOP 50993 Peptidase/esterase 'gauge' domain
1 1 1 0 SCOP 143081 BB1717-like
1 1 1 0 SCOP 158997 Trm112p-like
1 1 1 1 SCOP 53213 LigB-like
1 1 1 0 SCOP 52425 Cryptochrome/photolyase, N-terminal domain
1 1 1 1 SCOP 110916 Peptidyl-tRNA hydrolase domain-like
1 1 1 0 SCOP 101386 all-alpha NTP pyrophosphatases
1 1 1 0 SCOP 56747 Prim-pol domain
1 1 1 1 SCOP 110581 Indigoidine synthase A-like
1 1 1 0 SCOP 64288 Chorismate lyase-like
1 1 1 0 SCOP 51219 TRAP-like
1 1 1 1 SCOP 110395 CutC-like
1 1 1 0 SCOP 50974 Nitrous oxide reductase, N-terminal domain
1 1 1 0 SCOP 109709 KorB DNA-binding domain-like
1 1 1 0 SCOP 56726 DNA topoisomerase IV, alpha subunit
1 1 1 0 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
1 1 1 0 SCOP 158832 Tex N-terminal region-like
1 1 1 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
1 1 1 0 SCOP 82093 Heme chaperone CcmE
1 1 1 0 SCOP 69318 Integrin alpha N-terminal domain
1 1 1 0 SCOP 82114 Riboflavin kinase-like
1 1 1 1 SCOP 102645 CoaB-like
1 1 1 0 SCOP 118116 DNA mismatch repair protein MutL
1 1 1 0 SCOP 47162 Apolipoprotein
1 1 1 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 63999 Thiamin pyrophosphokinase, catalytic domain
1 1 1 0 SCOP 58022 XRCC4, C-terminal oligomerization domain
1 1 1 0 SCOP 140129 MxiH-like
1 1 1 0 SCOP 51294 Hedgehog/intein (Hint) domain
1 1 1 0 SCOP 46966 Spectrin repeat
1 1 1 1 SCOP 53623 MurD-like peptide ligases, catalytic domain
1 1 1 0 SCOP 81891 Poly A polymerase C-terminal region-like
1 1 1 0 SCOP 56042 PurM C-terminal domain-like
1 1 1 0 SCOP 55326 PurM N-terminal domain-like
1 1 1 0 SCOP 101278 N-terminal domain of adenylylcyclase associated protein, CAP
1 1 1 0 SCOP 48431 Lipovitellin-phosvitin complex, superhelical domain
1 1 1 0 SCOP 55550 SH2 domain
1 1 1 0 SCOP 55031 Bacterial exopeptidase dimerisation domain
1 1 1 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
1 1 1 0 SCOP 54991 Anticodon-binding domain of PheRS
1 1 1 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
1 1 1 0 SCOP 55394 Bactericidal permeability-increasing protein, BPI
1 1 1 0 SCOP 140741 RUN domain-like
1 1 1 0 SCOP 57924 Inhibitor of apoptosis (IAP) repeat
1 1 1 1 SCOP 140984 PTPA-like
1 1 1 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
1 1 1 0 SCOP 140102 ISY1 domain-like
1 1 1 0 SCOP 47912 Wiscott-Aldrich syndrome protein, WASP, C-terminal domain
1 1 1 0 SCOP 109775 Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain
1 1 1 0 SCOP 101931 Pym (Within the bgcn gene intron protein, WIBG), N-terminal domain
1 1 1 0 SCOP 63501 Frizzled cysteine-rich domain
1 1 1 0 SCOP 63862 Thiamin pyrophosphokinase, substrate-binding domain
1 1 1 0 SCOP 102860 mRNA decapping enzyme DcpS N-terminal domain
1 1 1 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 140586 Dcp2 domain-like
1 1 1 0 SCOP 81799 Putative methyltransferase TM0872, insert domain
1 1 1 0 SCOP 103661 Proline/betaine transporter ProP, C-terminal cytoplasmic domain
1 1 1 0 SCOP 57770 Methionyl-tRNA synthetase (MetRS), Zn-domain

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The following superfamilies have one or more weak hits:

SCOP superfamily Troponin coil-coiled subunits
SCOP superfamily Head morphogenesis protein gp7
SCOP superfamily Dimerization motif of sir4
SCOP superfamily Notch domain
SCOP superfamily Somatomedin B domain
SCOP superfamily Mollusk pheromone
SCOP superfamily Neurotransmitter-gated ion-channel transmembrane pore
SCOP superfamily Hypothetical protein Yml108w
SCOP superfamily YajQ-like
SCOP superfamily MTH1187/YkoF-like
SCOP superfamily Hypothetical protein VC0424
SCOP superfamily DNA-binding protein Tfx
SCOP superfamily AbrB/MazE/MraZ-like
SCOP superfamily Prokaryotic lipoproteins and lipoprotein localization factors
SCOP superfamily Fucose-specific lectin
SCOP superfamily Collagen-binding domain
SCOP superfamily Gametocyte protein Pfg27
SCOP superfamily TorD-like
SCOP superfamily GatB/YqeY motif
SCOP superfamily Antibiotic binding domain of TipA-like multidrug resistance regulators
SCOP superfamily Soluble domain of poliovirus core protein 3a
SCOP superfamily Cobalamin adenosyltransferase-like
SCOP superfamily Sigma2 domain of RNA polymerase sigma factors
SCOP superfamily Sigma3 and sigma4 domains of RNA polymerase sigma factors
SCOP superfamily ssDNA viruses
SCOP superfamily Tumor suppressor gene product Apc
SCOP superfamily Cysteine-rich DNA binding domain, (DM domain)
SCOP superfamily Apical membrane antigen 1
SCOP superfamily Mechanosensitive channel protein MscS (YggB), transmembrane region
SCOP superfamily L-A virus major coat protein
SCOP superfamily Replication modulator SeqA, C-terminal DNA-binding domain
SCOP superfamily Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
SCOP superfamily PurS-like
SCOP superfamily Mechanosensitive channel protein MscS (YggB), C-terminal domain
SCOP superfamily N-utilization substance G protein NusG, N-terminal domain
SCOP superfamily SEA domain
SCOP superfamily YbaB-like
SCOP superfamily Nuclease A inhibitor (NuiA)
SCOP superfamily FAS1 domain
SCOP superfamily Prokaryotic SH3-related domain
SCOP superfamily Viral chemokine binding protein m3
SCOP superfamily Orange carotenoid protein, N-terminal domain
SCOP superfamily Double Clp-N motif
SCOP superfamily Helical scaffold and wing domains of SecA
SCOP superfamily BRCA2 tower domain
SCOP superfamily BRCA2 helical domain
SCOP superfamily Myosin phosphatase inhibitor 17kDa protein, CPI-17
SCOP superfamily C-terminal domain of DFF45/ICAD (DFF-C domain)
SCOP superfamily Crustacean CHH/MIH/GIH neurohormone
SCOP superfamily X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal domain
SCOP superfamily Group V grass pollen allergen
SCOP superfamily beta-catenin-interacting protein ICAT
SCOP superfamily Plasmid maintenance system epsilon/zeta, antidote epsilon subunit
SCOP superfamily F1F0 ATP synthase subunit B, membrane domain
SCOP superfamily 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
SCOP superfamily Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
SCOP superfamily Bacterial photosystem II reaction centre, L and M subunits
SCOP superfamily Bacterial aa3 type cytochrome c oxidase subunit IV
SCOP superfamily Cytochrome c oxidase subunit II-like, transmembrane region
SCOP superfamily Cytochrome c oxidase subunit III-like
SCOP superfamily Cytochrome c oxidase subunit I-like
SCOP superfamily Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)
SCOP superfamily Mitochondrial cytochrome c oxidase subunit VIc
SCOP superfamily Mitochondrial cytochrome c oxidase subunit IV
SCOP superfamily ABC transporter involved in vitamin B12 uptake, BtuC
SCOP superfamily Fumarate reductase respiratory complex transmembrane subunits
SCOP superfamily Clc chloride channel
SCOP superfamily Gated mechanosensitive channel
SCOP superfamily Adenylylcyclase toxin (the edema factor)
SCOP superfamily H-NS histone-like proteins
SCOP superfamily Rad50 coiled-coil Zn hook
SCOP superfamily Chemotaxis phosphatase CheZ
SCOP superfamily YebC-like
SCOP superfamily Siroheme synthase middle domains-like
SCOP superfamily Rotavirus NSP2 fragment, N-terminal domain
SCOP superfamily Archaeal IMP cyclohydrolase PurO
SCOP superfamily YhbY-like
SCOP superfamily Hypothetical protein MTH1880
SCOP superfamily Rotavirus NSP2 fragment, C-terminal domain
SCOP superfamily Hypothetical protein MTH777 (MT0777)
SCOP superfamily DsrEFH-like
SCOP superfamily HprK N-terminal domain-like
SCOP superfamily Monomethylamine methyltransferase MtmB
SCOP superfamily Arabinanase/levansucrase/invertase
SCOP superfamily Small protein B (SmpB)
SCOP superfamily YhbC-like, C-terminal domain
SCOP superfamily V-region of surface antigen I/II (SA I/II, PAC)
SCOP superfamily Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha)
SCOP superfamily Lamin A/C globular tail domain
SCOP superfamily Translin
SCOP superfamily Aconitase B, N-terminal domain
SCOP superfamily Variable surface antigen VlsE
SCOP superfamily C-terminal domain of PLC-beta
SCOP superfamily Colicin E3 receptor domain
SCOP superfamily Eea1 homodimerisation domain
SCOP superfamily Head and neck region of the ectodomain of NDV fusion glycoprotein
SCOP superfamily OMPT-like
SCOP superfamily Membrane penetration protein mu1
SCOP superfamily NSP3 homodimer
SCOP superfamily LCCL domain
SCOP superfamily Thymidylate synthase-complementing protein Thy1
SCOP superfamily GTP cyclohydrolase I feedback regulatory protein, GFRP
SCOP superfamily Ribosome binding protein Y (YfiA homologue)
SCOP superfamily Glutamyl tRNA-reductase catalytic, N-terminal domain
SCOP superfamily Urease metallochaperone UreE, C-terminal domain
SCOP superfamily DsrC, the gamma subunit of dissimilatory sulfite reductase
SCOP superfamily Transcription factor NusA, N-terminal domain
SCOP superfamily DNA-binding C-terminal domain of the transcription factor MotA
SCOP superfamily Cell wall binding repeat
SCOP superfamily Phage fibre proteins
SCOP superfamily Phage tail proteins
SCOP superfamily Nucleoplasmin-like core domain
SCOP superfamily Penicillin-binding protein associated domain
SCOP superfamily Integrin domains
SCOP superfamily Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain
SCOP superfamily Glutamyl tRNA-reductase dimerization domain
SCOP superfamily Anti-sigma factor AsiA
SCOP superfamily Bcr-Abl oncoprotein oligomerization domain
SCOP superfamily alpha-ketoacid dehydrogenase kinase, N-terminal domain
SCOP superfamily RecG, N-terminal domain
SCOP superfamily FAT domain of focal adhesion kinase
SCOP superfamily Recombination endonuclease VII, C-terminal and dimerization domains
SCOP superfamily Rho N-terminal domain-like
SCOP superfamily SAP domain
SCOP superfamily F1 ATPase inhibitor, IF1, C-terminal domain
SCOP superfamily Intermediate filament protein, coiled coil region
SCOP superfamily Cellulose docking domain, dockering
SCOP superfamily Phase 1 flagellin
SCOP superfamily YopH tyrosine phosphatase N-terminal domain
SCOP superfamily YlxR-like
SCOP superfamily Photosystem I subunit PsaD
SCOP superfamily Head-to-tail joining protein W, gpW
SCOP superfamily Sortase
SCOP superfamily SAND domain-like
SCOP superfamily Cytolysin/lectin
SCOP superfamily Olfactory marker protein
SCOP superfamily Telomeric repeat binding factor (TRF) dimerisation domain
SCOP superfamily Flagellar transcriptional activator FlhD
SCOP superfamily PTS-regulatory domain, PRD
SCOP superfamily Outer surface protein C (OspC)
SCOP superfamily BAG domain
SCOP superfamily Apolipoprotein A-I
SCOP superfamily Colicin Ia, N-terminal domain
SCOP superfamily Clostridium neurotoxins, "coiled-coil" domain
SCOP superfamily Variant surface glycoprotein (N-terminal domain)
SCOP superfamily Virus ectodomain
SCOP superfamily Influenza hemagglutinin (stalk)
SCOP superfamily N-terminal coiled coil domain from apc
SCOP superfamily Outer membrane lipoprotein
SCOP superfamily Multimerization domain of the phosphoprotein from sendai virus
SCOP superfamily Rotavirus nonstructural proteins
SCOP superfamily Delta-sleep-inducing peptide immunoreactive peptide
SCOP superfamily Coiled-coil dimerization domain from cortexillin I
SCOP superfamily Fibrinogen coiled-coil and central regions
SCOP superfamily Assembly domain of cartilage oligomeric matrix protein
SCOP superfamily Chicken cartilage matrix protein
SCOP superfamily Trimerization domain of TRAF
SCOP superfamily TAZ domain
SCOP superfamily Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
SCOP superfamily Microbial and mitochondrial ADK, insert "zinc finger" domain
SCOP superfamily Zn2/Cys6 DNA-binding domain
SCOP superfamily HIPIP (high potential iron protein)
SCOP superfamily Thyroglobulin type-1 domain
SCOP superfamily Antifungal protein (AGAFP)
SCOP superfamily TNF receptor-like
SCOP superfamily Serine protease inhibitors
SCOP superfamily Blood coagulation inhibitor (disintegrin)
SCOP superfamily Trefoil
SCOP superfamily LDL receptor-like module
SCOP superfamily Hairpin loop containing domain-like
SCOP superfamily Snake toxin-like
SCOP superfamily Colipase-like
SCOP superfamily Scorpion toxin-like
SCOP superfamily omega toxin-like
SCOP superfamily Neurotoxin B-IV
SCOP superfamily Insulin-like
SCOP superfamily Viral glycoprotein, central and dimerisation domains
SCOP superfamily Perfringolysin
SCOP superfamily Aerolisin/ETX pore-forming domain
SCOP superfamily Lipovitellin-phosvitin complex; beta-sheet shell regions
SCOP superfamily Leukocidin-like
SCOP superfamily Outer membrane efflux proteins (OEP)
SCOP superfamily Porins
SCOP superfamily Outer membrane phospholipase A (OMPLA)
SCOP superfamily OMPA-like
SCOP superfamily Bcl-2 inhibitors of programmed cell death
SCOP superfamily delta-Endotoxin (insectocide), N-terminal domain
SCOP superfamily Colicin
SCOP superfamily Reovirus inner layer core protein p3
SCOP superfamily Upper collar protein gp10 (connector protein)
SCOP superfamily Prismane protein-like
SCOP superfamily Replication terminator protein (Tus)
SCOP superfamily Serpins
SCOP superfamily Conserved core of transcriptional regulatory protein vp16
SCOP superfamily Penicillin binding protein dimerisation domain
SCOP superfamily Nitric oxide (NO) synthase oxygenase domain
SCOP superfamily Methionine synthase activation domain-like
SCOP superfamily gp120 core
SCOP superfamily Fibrinogen C-terminal domain-like
SCOP superfamily C-type lectin-like
SCOP superfamily ADC synthase
SCOP superfamily S-adenosylmethionine decarboxylase
SCOP superfamily DmpA/ArgJ-like
SCOP superfamily Monooxygenase (hydroxylase) regulatory protein
SCOP superfamily Sporulation response regulatory protein Spo0B
SCOP superfamily Phoshotransferase/anion transport protein
SCOP superfamily Mog1p/PsbP-like
SCOP superfamily CytB endotoxin-like
SCOP superfamily Regulatory factor Nef
SCOP superfamily L9 N-domain-like
SCOP superfamily Tetrahydrobiopterin biosynthesis enzymes-like
SCOP superfamily Homing endonucleases
SCOP superfamily Glucose permease domain IIB
SCOP superfamily FMN-dependent nitroreductase-like
SCOP superfamily Origin of replication-binding domain, RBD-like
SCOP superfamily tRNA-intron endonuclease N-terminal domain-like
SCOP superfamily C-terminal domain of arginine repressor
SCOP superfamily RuBisCO, small subunit
SCOP superfamily Translation initiation factor IF3, C-terminal domain
SCOP superfamily Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
SCOP superfamily Pepsin inhibitor-3
SCOP superfamily 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
SCOP superfamily Translational regulator protein regA
SCOP superfamily Killer toxin KP6 alpha-subunit
SCOP superfamily CheY-binding domain of CheA
SCOP superfamily TRADD, N-terminal domain
SCOP superfamily Protease propeptides/inhibitors
SCOP superfamily Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain
SCOP superfamily DNA damage-inducible protein DinI
SCOP superfamily GMP synthetase C-terminal dimerisation domain
SCOP superfamily Chalcone isomerase
SCOP superfamily DNA-binding domain of Mlu1-box binding protein MBP1
SCOP superfamily SecB-like
SCOP superfamily Allophycocyanin linker chain (domain)
SCOP superfamily Pili subunits
SCOP superfamily GFP-like
SCOP superfamily Diaminopimelate epimerase-like
SCOP superfamily MHC antigen-recognition domain
SCOP superfamily Superantigen toxins, C-terminal domain
SCOP superfamily Staphylokinase/streptokinase
SCOP superfamily Interleukin 8-like chemokines
SCOP superfamily Prion-like
SCOP superfamily RNase A-like
SCOP superfamily His-Me finger endonucleases
SCOP superfamily Microbial ribonucleases
SCOP superfamily "Helical backbone" metal receptor
SCOP superfamily FucI/AraA N-terminal and middle domains
SCOP superfamily Aspartate/glutamate racemase
SCOP superfamily Aspartate/ornithine carbamoyltransferase
SCOP superfamily Carbamate kinase-like
SCOP superfamily PTS IIb component
SCOP superfamily Methylglyoxal synthase-like
SCOP superfamily N-(deoxy)ribosyltransferase-like
SCOP superfamily Type II 3-dehydroquinate dehydratase
SCOP superfamily SGNH hydrolase
SCOP superfamily Caspase-like
SCOP superfamily Barstar-related
SCOP superfamily Glycosyl hydrolases family 6, cellulases
SCOP superfamily Bacterial luciferase-like
SCOP superfamily Xylose isomerase-like
SCOP superfamily Malate synthase G
SCOP superfamily Epsilon subunit of F1F0-ATP synthase N-terminal domain
SCOP superfamily Cyanovirin-N
SCOP superfamily Tlp20, baculovirus telokin-like protein
SCOP superfamily Urease, beta-subunit
SCOP superfamily AFP III-like domain
SCOP superfamily An insect antifreeze protein
SCOP superfamily delta-Endotoxin (insectocide), middle domain
SCOP superfamily Outer surface protein
SCOP superfamily Bacteriochlorophyll A protein
SCOP superfamily C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
SCOP superfamily Hemopexin-like domain
SCOP superfamily Rap30/74 interaction domains
SCOP superfamily beta-Barrel protease inhibitors
SCOP superfamily Barwin-like endoglucanases
SCOP superfamily FucI/AraA C-terminal domain-like
SCOP superfamily Actin-crosslinking proteins
SCOP superfamily STI-like
SCOP superfamily Agglutinin
SCOP superfamily Cytokine
SCOP superfamily TIMP-like
SCOP superfamily Bacterial enterotoxins
SCOP superfamily Cell growth inhibitor/plasmid maintenance toxic component
SCOP superfamily C-terminal domain of transcriptional repressors
SCOP superfamily gp9
SCOP superfamily Amine oxidase catalytic domain
SCOP superfamily Baculovirus p35 protein
SCOP superfamily Spermadhesin, CUB domain
SCOP superfamily TNF-like
SCOP superfamily Virus attachment protein globular domain
SCOP superfamily Viral protein domain
SCOP superfamily Group II dsDNA viruses VP
SCOP superfamily PHM/PNGase F
SCOP superfamily Lipase/lipooxygenase domain (PLAT/LH2 domain)
SCOP superfamily Rab geranylgeranyltransferase alpha-subunit, insert domain
SCOP superfamily PHL pollen allergen
SCOP superfamily Periplasmic chaperone C-domain
SCOP superfamily Cna protein B-type domain
SCOP superfamily p53-like transcription factors
SCOP superfamily Invasin/intimin cell-adhesion fragments
SCOP superfamily Superoxide reductase-like
SCOP superfamily Purple acid phosphatase, N-terminal domain
SCOP superfamily Transglutaminase, two C-terminal domains
SCOP superfamily PKD domain
SCOP superfamily Immunoglobulin
SCOP superfamily Epsilon subunit of mitochondrial F1F0-ATP synthase
SCOP superfamily Moesin tail domain
SCOP superfamily Fe-only hydrogenase smaller subunit
SCOP superfamily Transducin (heterotrimeric G protein), gamma chain
SCOP superfamily FinO-like
SCOP superfamily Tetraspanin
SCOP superfamily Fungal elicitin
SCOP superfamily Phospholipase A2, PLA2
SCOP superfamily Heme oxygenase-like
SCOP superfamily Chorismate mutase II
SCOP superfamily Serum albumin-like
SCOP superfamily Nuclear receptor ligand-binding domain
SCOP superfamily gene 59 helicase assembly protein
SCOP superfamily Lipoxigenase
SCOP superfamily Cytochrome c oxidase subunit E
SCOP superfamily A virus capsid protein alpha-helical domain
SCOP superfamily Aldehyde ferredoxin oxidoreductase, C-terminal domains
SCOP superfamily Ribosomal protein L7/12, oligomerisation (N-terminal) domain
SCOP superfamily TrpR-like
SCOP superfamily Chondroitin AC/alginate lyase
SCOP superfamily Seven-hairpin glycosidases
SCOP superfamily An anticodon-binding domain of class I aminoacyl-tRNA synthetases
SCOP superfamily Influenza virus matrix protein M1
SCOP superfamily Heme-dependent peroxidases
SCOP superfamily Carbamoyl phosphate synthetase, large subunit connection domain
SCOP superfamily Regulator of G-protein signaling, RGS
SCOP superfamily Methyl-coenzyme M reductase alpha and beta chain C-terminal domain
SCOP superfamily Hemocyanin, N-terminal domain
SCOP superfamily FliG
SCOP superfamily NusB-like
SCOP superfamily GntR ligand-binding domain-like
SCOP superfamily DEATH domain
SCOP superfamily Retrovirus capsid protein, N-terminal core domain
SCOP superfamily ERP29 C domain-like
SCOP superfamily Transducin (alpha subunit), insertion domain
SCOP superfamily Annexin
SCOP superfamily Apolipophorin-III
SCOP superfamily Retroviral matrix proteins
SCOP superfamily Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
SCOP superfamily lambda integrase-like, N-terminal domain
SCOP superfamily C-terminal domain of RNA polymerase alpha subunit
SCOP superfamily RuvA domain 2-like
SCOP superfamily PAH2 domain
SCOP superfamily Chemotaxis receptor methyltransferase CheR, N-terminal domain
SCOP superfamily IHF-like DNA-binding proteins
SCOP superfamily Cytochrome c oxidase subunit h
SCOP superfamily Anaphylotoxins (complement system)
SCOP superfamily Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
SCOP superfamily Transferrin receptor-like dimerisation domain
SCOP superfamily N-terminal domain of cbl (N-cbl)
SCOP superfamily STAT
SCOP superfamily Methionine synthase domain
SCOP superfamily Ribbon-helix-helix
SCOP superfamily Insect pheromone/odorant-binding proteins
SCOP superfamily HLH, helix-loop-helix DNA-binding domain
SCOP superfamily A DNA-binding domain in eukaryotic transcription factors
SCOP superfamily Transcription factor IIA (TFIIA), alpha-helical domain
SCOP superfamily ROP protein
SCOP superfamily Retrovirus capsid dimerization domain-like
SCOP superfamily Colicin E immunity proteins
SCOP superfamily 4-helical cytokines
SCOP superfamily alpha-catenin/vinculin-like
SCOP superfamily Proteasome activator
SCOP superfamily TMV-like viral coat proteins
SCOP superfamily Hemerythrin-like
SCOP superfamily Cytochromes
SCOP superfamily Aspartate receptor, ligand-binding domain
SCOP superfamily Methane monooxygenase hydrolase, gamma subunit
SCOP superfamily Diol dehydratase, gamma subunit
SCOP superfamily PGBD-like
SCOP superfamily Fertilization protein
SCOP superfamily T4 endonuclease V
SCOP superfamily RAP domain-like
SCOP superfamily Bacterial immunoglobulin/albumin-binding domains
SCOP superfamily Ribosomal protein S20
SCOP superfamily Smac/diablo
SCOP superfamily Enzyme IIa from lactose specific PTS, IIa-lac
SCOP superfamily N-terminal Zn binding domain of HIV integrase
SCOP superfamily Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
SCOP superfamily C-terminal effector domain of the bipartite response regulators
SCOP superfamily C-terminal UvrC-binding domain of UvrB
SCOP superfamily Eukaryotic DNA topoisomerase I, dispensable insert domain
SCOP superfamily HR1 repeat
SCOP superfamily DNA polymerase III theta subunit-like
SCOP superfamily GreA transcript cleavage protein, N-terminal domain
SCOP superfamily PspA lactotransferrin-binding region
SCOP superfamily Gam-like
SCOP superfamily RILP dimerisation region
SCOP superfamily T-antigen specific domain-like
SCOP superfamily E7 C-terminal domain-like
SCOP superfamily E6 C-terminal domain-like
SCOP superfamily YfgJ-like
SCOP superfamily MetI-like
SCOP superfamily MgtE membrane domain-like
SCOP superfamily MAPEG domain-like
SCOP superfamily ATP synthase B chain-like
SCOP superfamily Cytochrome b559 subunits
SCOP superfamily Photosystem II reaction center protein I, PsbI
SCOP superfamily Photosystem II reaction center protein M, PsbM
SCOP superfamily Viral glycoprotein ectodomain-like
SCOP superfamily HI0933 insert domain-like
SCOP superfamily CV3147-like
SCOP superfamily SSO1389-like
SCOP superfamily AF1531-like
SCOP superfamily MalF N-terminal region-like
SCOP superfamily Poly(A) polymerase catalytic subunit-like
SCOP superfamily YacF-like
SCOP superfamily FlhC-like
SCOP superfamily Taf5 N-terminal domain-like
SCOP superfamily gpW/gp25-like
SCOP superfamily YqaI-like
SCOP superfamily YehR-like
SCOP superfamily YNR034W-A-like
SCOP superfamily FLJ32549 C-terminal domain-like
SCOP superfamily SMI1/KNR4-like
SCOP superfamily BT0923-like
SCOP superfamily SpoVG-like
SCOP superfamily YueI-like
SCOP superfamily PA1123-like
SCOP superfamily NMB0513-like
SCOP superfamily PH0987 N-terminal domain-like
SCOP superfamily BLRF2-like
SCOP superfamily YdfO-like
SCOP superfamily Bacterial polysaccharide co-polymerase-like
SCOP superfamily Shew3726-like
SCOP superfamily Cation efflux protein cytoplasmic domain-like
SCOP superfamily FlaG-like
SCOP superfamily NMB0488-like
SCOP superfamily YcgL-like
SCOP superfamily MM3350-like
SCOP superfamily NSP3A-like
SCOP superfamily PH1570-like
SCOP superfamily YdhG-like
SCOP superfamily PrpR receptor domain-like
SCOP superfamily Cgl1923-like
SCOP superfamily TBP-interacting protein-like
SCOP superfamily XCC0632-like
SCOP superfamily EreA/ChaN-like
SCOP superfamily YmcC-like
SCOP superfamily AttH-like
SCOP superfamily FomD-like
SCOP superfamily YopT-like
SCOP superfamily YkvR-like
SCOP superfamily HIN-2000 domain-like
SCOP superfamily YopX-like
SCOP superfamily Smr-associated domain-like
SCOP superfamily NEAT domain-like
SCOP superfamily Lipase chaperone-like
SCOP superfamily Lag-3 N-terminal region
SCOP superfamily PMT central region-like
SCOP superfamily AGR C 984p-like
SCOP superfamily SMc04008-like
SCOP superfamily HP0242-like
SCOP superfamily MG296-like
SCOP superfamily PSPTO4464-like
SCOP superfamily TerB-like
SCOP superfamily Sama2622-like
SCOP superfamily MtlR-like
SCOP superfamily YejL-like
SCOP superfamily ENT-like
SCOP superfamily RPA2825-like
SCOP superfamily YheA/YmcA-like
SCOP superfamily RbcX-like
SCOP superfamily AF1862-like
SCOP superfamily BH3980-like
SCOP superfamily TAFH domain-like
SCOP superfamily FLJ32549 domain-like
SCOP superfamily GspK insert domain-like
SCOP superfamily BH2638-like
SCOP superfamily PG0775 C-terminal domain-like
SCOP superfamily HAMP domain-like
SCOP superfamily YqcC-like
SCOP superfamily DsbB-like
SCOP superfamily Ta0600-like
SCOP superfamily Bacillus cereus metalloprotein-like
SCOP superfamily SO2669-like
SCOP superfamily HP0062-like
SCOP superfamily TM1646-like
SCOP superfamily YvfG-like
SCOP superfamily YqgQ-like
SCOP superfamily Efb C-domain-like
SCOP superfamily YnzC-like
SCOP superfamily occludin/ELL-like
SCOP superfamily Sec2 N-terminal region
SCOP superfamily Heterotrimerisation domain of extracellular hemoglobin linker subunits
SCOP superfamily Eferin C-derminal domain-like
SCOP superfamily MPN010-like
SCOP superfamily Vanabin-like
SCOP superfamily ImpE-like
SCOP superfamily Thermophilic metalloprotease-like
SCOP superfamily FdhE-like
SCOP superfamily Peptidoglycan deacetylase N-terminal noncatalytic region
SCOP superfamily ORC1-binding domain
SCOP superfamily L,D-transpeptidase pre-catalytic domain-like
SCOP superfamily PF0523-like
SCOP superfamily CorA soluble domain-like
SCOP superfamily YwmB-like
SCOP superfamily STIV B116-like
SCOP superfamily YojJ-like
SCOP superfamily YkuJ-like
SCOP superfamily FwdE-like
SCOP superfamily TRCF domain-like
SCOP superfamily Transposase IS200-like
SCOP superfamily DOPA-like
SCOP superfamily YefM-like
SCOP superfamily TTHA1013/TTHA0281-like
SCOP superfamily RelE-like
SCOP superfamily YktB/PF0168-like
SCOP superfamily YjbR-like
SCOP superfamily TFB5-like
SCOP superfamily PhtA domain-like
SCOP superfamily EndoU-like
SCOP superfamily CAC2185-like
SCOP superfamily NadA-like
SCOP superfamily AF0625-like
SCOP superfamily EAL domain-like
SCOP superfamily MFPT repeat-like
SCOP superfamily Bacteriophage trimeric proteins domain
SCOP superfamily L,D-transpeptidase catalytic domain-like
SCOP superfamily BH3618-like
SCOP superfamily PilZ domain-like
SCOP superfamily TM0957-like
SCOP superfamily GatD N-terminal domain-like
SCOP superfamily YccV-like
SCOP superfamily Kinase-associated protein B-like
SCOP superfamily Topoisomerase V catalytic domain-like
SCOP superfamily Indolic compounds 2,3-dioxygenase-like
SCOP superfamily Duffy binding domain-like
SCOP superfamily DNA terminal protein
SCOP superfamily PriB N-terminal domain-like
SCOP superfamily GUN4-like
SCOP superfamily Pseudo ankyrin repeat-like
SCOP superfamily USP8 N-terminal domain-like
SCOP superfamily Rhabdovirus nucleoprotein-like
SCOP superfamily YidB-like
SCOP superfamily PG0816-like
SCOP superfamily SipA N-terminal domain-like
SCOP superfamily Rv1873-like
SCOP superfamily PA2201 C-terminal domain-like
SCOP superfamily AF0941-like
SCOP superfamily IpaD-like
SCOP superfamily Hyaluronidase post-catalytic domain-like
SCOP superfamily YozE-like
SCOP superfamily EF2947-like
SCOP superfamily Type III secretion system domain
SCOP superfamily HIV integrase-binding domain
SCOP superfamily MukF C-terminal domain-like
SCOP superfamily FlgN-like
SCOP superfamily TM0693-like
SCOP superfamily BAS1536-like
SCOP superfamily HP1531-like
SCOP superfamily MAST3 pre-PK domain-like
SCOP superfamily LemA-like
SCOP superfamily EsxAB dimer-like
SCOP superfamily VPS28 C-terminal domain-like
SCOP superfamily MW0975(SA0943)-like
SCOP superfamily YppE-like
SCOP superfamily BSD domain-like
SCOP superfamily ChaB-like
SCOP superfamily MIT domain-like
SCOP superfamily PPK N-terminal domain-like
SCOP superfamily Rabenosyn-5 Rab-binding domain-like
SCOP superfamily SPy1572-like
SCOP superfamily Calcyclin-binding protein-like
SCOP superfamily Expressed protein At2g23090/F21P24.15
SCOP superfamily HSP33 redox switch-like
SCOP superfamily WRKY DNA-binding domain
SCOP superfamily Proton glutamate symport protein
SCOP superfamily Viral ssDNA binding protein
SCOP superfamily YaeB-like
SCOP superfamily RalF, C-terminal domain
SCOP superfamily TM1457-like
SCOP superfamily YehU-like
SCOP superfamily YbeD/HP0495-like
SCOP superfamily Flagellar hook protein flgE
SCOP superfamily CsrA-like
SCOP superfamily LEA14-like
SCOP superfamily DNA primase DnaG, C-terminal domain
SCOP superfamily Hypothetical protein MPN330
SCOP superfamily YfbU-like
SCOP superfamily RNA-binding protein She2p
SCOP superfamily EspA/CesA-like
SCOP superfamily Hypothetical protein YqbG
SCOP superfamily TrmE connector domain
SCOP superfamily MIT domain
SCOP superfamily XseB-like
SCOP superfamily DNA methylase specificity domain
SCOP superfamily Fzo-like conserved region
SCOP superfamily Coronavirus S2 glycoprotein
SCOP superfamily Geminin coiled-coil domain
SCOP superfamily YAP1 redox domain
SCOP superfamily OmpH-like
SCOP superfamily VP4 membrane interaction domain
SCOP superfamily Tsx-like channel
SCOP superfamily Mitochondrial ATP synthase coupling factor 6
SCOP superfamily Rap/Ran-GAP
SCOP superfamily AF1104-like
SCOP superfamily Recombination protein RecR
SCOP superfamily Putative modulator of DNA gyrase, PmbA/TldD
SCOP superfamily SSo0622-like
SCOP superfamily Hemolytic lectin CEL-III, C-terminal domain
SCOP superfamily Sulfolobus fructose-1,6-bisphosphatase-like
SCOP superfamily Rbstp2229 protein
SCOP superfamily YggX-like
SCOP superfamily Hypothetical protein yfbM
SCOP superfamily Coronavirus RNA-binding domain
SCOP superfamily Her-1
SCOP superfamily Hypothetical protein MG354
SCOP superfamily Hypothetical protein YhaI
SCOP superfamily I/LWEQ domain
SCOP superfamily A middle domain of Talin 1
SCOP superfamily CAPPD, an extracellular domain of amyloid beta A4 protein
SCOP superfamily Cag-Z
SCOP superfamily Hypothetical protein D-63
SCOP superfamily Bacteriocin immunity protein-like
SCOP superfamily Domain from hypothetical 2610208m17rik protein
SCOP superfamily Nickel-containing superoxide dismutase, NiSOD
SCOP superfamily PhoU-like
SCOP superfamily Alpha-hemoglobin stabilizing protein AHSP
SCOP superfamily FGAM synthase PurL, linker domain
SCOP superfamily DEK C-terminal domain
SCOP superfamily DnaK suppressor protein DksA, alpha-hairpin domain
SCOP superfamily Transcriptional repressor TraM
SCOP superfamily G protein-binding domain
SCOP superfamily SBT domain
SCOP superfamily Plexin repeat
SCOP superfamily Respiratory nitrate reductase 1 gamma chain
SCOP superfamily PetL subunit of the cytochrome b6f complex
SCOP superfamily Major capsid protein VP5
SCOP superfamily Virulence-associated V antigen
SCOP superfamily Antivirulence factor
SCOP superfamily Hypothetical protein HI1480
SCOP superfamily Hypothetical protein TM0160
SCOP superfamily Ta1353-like
SCOP superfamily Holliday junction resolvase RusA
SCOP superfamily General secretion pathway protein M, EpsM
SCOP superfamily CheC-like
SCOP superfamily Hypothetical protein YwqG
SCOP superfamily Hypothetical protein TT1725
SCOP superfamily Cell division protein ZapA-like
SCOP superfamily Colicin D/E5 nuclease domain
SCOP superfamily Trigger factor ribosome-binding domain
SCOP superfamily Alpha-2,3/8-sialyltransferase CstII
SCOP superfamily MCP/YpsA-like
SCOP superfamily DNA polymerase III psi subunit
SCOP superfamily NAC domain
SCOP superfamily DNA-binding pseudobarrel domain
SCOP superfamily Sema domain
SCOP superfamily GyrA/ParC C-terminal domain-like
SCOP superfamily YceI-like
SCOP superfamily SspB-like
SCOP superfamily Hypothetical protein YfhH
SCOP superfamily Anti-sigma factor FlgM
SCOP superfamily Stathmin
SCOP superfamily Eukaryotic initiation factor 4f subunit eIF4g, eIF4e-binding domain
SCOP superfamily Hypothetical protein ST1625
SCOP superfamily Hsp90 co-chaperone CDC37
SCOP superfamily Superantigen MAM
SCOP superfamily YgfB-like
SCOP superfamily YcfC-like
SCOP superfamily L27 domain
SCOP superfamily Methenyltetrahydrofolate cyclohydrolase-like
SCOP superfamily Flavivirus capsid protein C
SCOP superfamily HAND domain of the nucleosome remodeling ATPase ISWI
SCOP superfamily KaiA/RbsU domain
SCOP superfamily Docking domain B of the erythromycin polyketide synthase (DEBS)
SCOP superfamily Nonstructural protein ns2, Nep, M1-binding domain
SCOP superfamily Plant invertase/pectin methylesterase inhibitor
SCOP superfamily Colicin D immunity protein
SCOP superfamily Flagellar export chaperone FliS
SCOP superfamily Oxygen-evolving enhancer protein 3,
SCOP superfamily Staphylocoagulase
SCOP superfamily Phosphoprotein XD domain
SCOP superfamily Typo IV secretion system protein TraC
SCOP superfamily B-form DNA mimic Ocr
SCOP superfamily Chemosensory protein Csp2
SCOP superfamily Kazal-type serine protease inhibitors

Jump to [ Top of page · Assignment statistics ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.